View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15428_low_24 (Length: 263)
Name: NF15428_low_24
Description: NF15428
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15428_low_24 |
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Alignment Details
Target: chr4 (Bit Score: 243; Significance: 1e-135; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 36707431 - 36707677
Alignment:
| Q |
1 |
cgagtttgattatttcaaatttgtaattggaattgtaggtgcctccttggggaaaaggaacattgtacattaggcctttactatttggaagcggacctgt |
100 |
Q |
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| T |
36707431 |
cgagtttgattatttcaaatttgtaattggaattgtaggtgcctccttggggaaaaggaacattgtacattaggcctttactatttggaagcggacctgt |
36707530 |
T |
|
| Q |
101 |
tctgggtattggaccagcacctcaatgcaccctcttaatattcactaatccaattagcaacatttacaaggtacagtatctaattttcaattagaattta |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
36707531 |
tctgggtattggaccagcacctcaatgcaccctcttaatattcactaatccaattagcaacatttacaaggtacggtatctaattttcaattagaattta |
36707630 |
T |
|
| Q |
201 |
ttatgtcaaaacaattgaggactaataaccaaagtgtaaacatggac |
247 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36707631 |
ttatgtcaaaacaattgaggactaataaccaaagtgtaaacatggac |
36707677 |
T |
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