View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15428_low_33 (Length: 230)

Name: NF15428_low_33
Description: NF15428
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15428_low_33
NF15428_low_33
[»] chr4 (15 HSPs)
chr4 (17-139)||(9097014-9097135)
chr4 (21-138)||(26871152-26871268)
chr4 (17-139)||(41985840-41985961)
chr4 (21-136)||(29345682-29345796)
chr4 (17-138)||(19588404-19588524)
chr4 (17-138)||(10261454-10261574)
chr4 (17-138)||(21562881-21563001)
chr4 (17-138)||(24079524-24079644)
chr4 (17-138)||(26926396-26926516)
chr4 (17-138)||(43330402-43330522)
chr4 (17-138)||(51450468-51450588)
chr4 (21-136)||(35831446-35831560)
chr4 (68-136)||(29345826-29345892)
chr4 (68-136)||(35831590-35831655)
chr4 (17-84)||(47722647-47722715)
[»] chr1 (10 HSPs)
chr1 (17-138)||(49223549-49223669)
chr1 (17-139)||(28568305-28568426)
chr1 (67-139)||(17670384-17670454)
chr1 (17-80)||(21728398-21728462)
chr1 (67-117)||(16032700-16032750)
chr1 (67-139)||(12246421-12246491)
chr1 (72-136)||(18091689-18091751)
chr1 (67-139)||(36680329-36680399)
chr1 (67-139)||(45003819-45003889)
chr1 (17-61)||(18092044-18092089)
[»] chr7 (14 HSPs)
chr7 (17-137)||(47172030-47172149)
chr7 (21-138)||(38435407-38435523)
chr7 (21-138)||(42995743-42995859)
chr7 (17-139)||(4490588-4490709)
chr7 (17-138)||(19035782-19035902)
chr7 (17-138)||(20718734-20718854)
chr7 (17-138)||(29488982-29489102)
chr7 (17-138)||(33232082-33232202)
chr7 (17-138)||(34284225-34284345)
chr7 (34-138)||(20763404-20763506)
chr7 (21-105)||(46197903-46197988)
chr7 (67-139)||(42828487-42828557)
chr7 (17-61)||(41056448-41056494)
chr7 (73-136)||(41054972-41055033)
[»] scaffold0095 (1 HSPs)
scaffold0095 (21-138)||(625-741)
[»] scaffold0088 (1 HSPs)
scaffold0088 (21-138)||(54953-55069)
[»] chr8 (10 HSPs)
chr8 (21-138)||(12251035-12251151)
chr8 (21-138)||(23620438-23620554)
chr8 (21-138)||(39444056-39444172)
chr8 (17-135)||(29431637-29431754)
chr8 (17-139)||(39201925-39202046)
chr8 (17-139)||(41905142-41905270)
chr8 (17-138)||(20665048-20665168)
chr8 (17-138)||(30550414-30550534)
chr8 (34-138)||(44215182-44215284)
chr8 (68-139)||(22947359-22947428)
[»] chr5 (5 HSPs)
chr5 (21-138)||(9700391-9700507)
chr5 (17-139)||(18040743-18040864)
chr5 (21-139)||(3212788-3212905)
chr5 (17-138)||(37462369-37462489)
chr5 (67-139)||(33929373-33929443)
[»] chr6 (7 HSPs)
chr6 (17-139)||(3090430-3090550)
chr6 (34-139)||(3053526-3053629)
chr6 (34-138)||(33976492-33976594)
chr6 (17-138)||(247915-248035)
chr6 (17-137)||(12581918-12582032)
chr6 (67-139)||(28229582-28229652)
chr6 (17-84)||(1931196-1931264)
[»] chr3 (12 HSPs)
chr3 (17-137)||(8239303-8239422)
chr3 (17-139)||(52464524-52464645)
chr3 (17-138)||(44074842-44074962)
chr3 (17-138)||(916702-916822)
chr3 (17-139)||(54795591-54795706)
chr3 (17-84)||(12170535-12170603)
chr3 (17-83)||(36170046-36170113)
chr3 (72-136)||(42617307-42617369)
chr3 (47-138)||(28169755-28169844)
chr3 (17-61)||(11381467-11381512)
chr3 (67-139)||(32754543-32754613)
chr3 (21-61)||(42616976-42617017)
[»] scaffold0006 (1 HSPs)
scaffold0006 (17-139)||(156133-156254)
[»] chr2 (7 HSPs)
chr2 (17-138)||(3708949-3709069)
chr2 (17-138)||(11868347-11868467)
chr2 (17-138)||(35359740-35359860)
chr2 (17-76)||(14750803-14750863)
chr2 (67-136)||(28381074-28381141)
chr2 (67-139)||(45397892-45397962)
chr2 (67-139)||(35286913-35286983)
[»] scaffold0010 (2 HSPs)
scaffold0010 (34-137)||(50621-50722)
scaffold0010 (34-137)||(58154-58255)
[»] scaffold0038 (1 HSPs)
scaffold0038 (67-139)||(30080-30150)
[»] scaffold0051 (1 HSPs)
scaffold0051 (21-76)||(63049-63105)


Alignment Details
Target: chr4 (Bit Score: 81; Significance: 3e-38; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 9097014 - 9097135
Alignment:
Q  17 aaaccttaccatgagctaaa-ttcaatcatcatgacctctactatactttacataacaaaggaagatttttctacggccatgcaacataacaatttatgg 115  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||| |||||||||||||||||||| |||    
T  9097014 aaaccttaccatgagctaaaattcaatcatcatgacctctactatactccacataacaaaggaagatttttctacagccatgcaacataacaatttttgg 9097113  T
Q  116 tatacataatccactaacaattga 139  Q
      |||||||||||| || ||||||    
T  9097114 --tacataatccaccaagaattga 9097135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 21 - 138
Target Start/End: Original strand, 26871152 - 26871268
Alignment:
Q  21 cttaccatgagctaaa-ttcaatcatcatgacctctactatactttacataacaaaggaagatttttctacggccatgcaacataacaatttatggtata 119  Q
    |||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||  ||||||||||||| ||||| |||  ||    
T  26871152 cttaccatgagctaaaattcaatcatcatgacctctactatactccacataacaaaggaagatttttctacaaccatgcaacataaaaatttctgg--ta 26871249  T
Q  120 cataatccactaacaattg 138  Q
    |||||||||||||||||||    
T  26871250 cataatccactaacaattg 26871268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 41985840 - 41985961
Alignment:
Q  17 aaaccttaccatgagctaaa-ttcaatcatcatgacctctactatactttacataacaaaggaagatttttctacggccatgcaacataacaatttatgg 115  Q
    |||||||||||||| ||||| |||||||||||||||||||||| ||||  |||| |||||||||||||||||||| | |||||||||||||||||| |||    
T  41985840 aaaccttaccatgaactaaaattcaatcatcatgacctctactgtactccacattacaaaggaagatttttctacagtcatgcaacataacaatttctgg 41985939  T
Q  116 tatacataatccactaacaattga 139  Q
      ||||||||||||||||||||||    
T  41985940 --tacataatccactaacaattga 41985961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 21 - 136
Target Start/End: Original strand, 29345682 - 29345796
Alignment:
Q  21 cttaccatgagctaaa-ttcaatcatcatgacctctactatactttacataacaaaggaagatttttctacggccatgcaacataacaatttatggtata 119  Q
    |||||||||||||||| |||||||||||| ||||||| ||||||  ||||||||||||||||||||||||| ||||||||||||| |||||| ||  |||    
T  29345682 cttaccatgagctaaaattcaatcatcattacctctattatactccacataacaaaggaagatttttctacagccatgcaacataccaatttctg--ata 29345779  T
Q  120 cataatccactaacaat 136  Q
    ||||||||| |||||||    
T  29345780 cataatccattaacaat 29345796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 17 - 138
Target Start/End: Complemental strand, 19588524 - 19588404
Alignment:
Q  17 aaaccttaccatgagctaaa-ttcaatcatcatgacctctactatactttacataacaaaggaagatttttctacggccatgcaacataacaatttatgg 115  Q
    |||| |||||||||| |||| |||| |||||||||||||||||||| |  ||||||||||||||||||||||||| |||||||| ||||||||||| |||    
T  19588524 aaactttaccatgagttaaaattcagtcatcatgacctctactatattccacataacaaaggaagatttttctacagccatgcatcataacaatttttgg 19588425  T
Q  116 tatacataatccactaacaattg 138  Q
      ||||||||||| |||||||||    
T  19588424 --tacataatccaataacaattg 19588404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 138
Target Start/End: Original strand, 10261454 - 10261574
Alignment:
Q  17 aaaccttaccatgagctaaa-ttcaatcatcatgacctctactatactttacataacaaaggaagatttttctacggccatgcaacataacaatttatgg 115  Q
    |||||||||||| || |||| |||| ||||||||||||||||||||||  |||||||||| || ||||||||||| ||||||||||||||||| || |||    
T  10261454 aaaccttaccatcagttaaaattcagtcatcatgacctctactatactccacataacaaaagacgatttttctacagccatgcaacataacaaattttgg 10261553  T
Q  116 tatacataatccactaacaattg 138  Q
      ||||||||||| |||||||||    
T  10261554 --tacataatccaataacaattg 10261574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 138
Target Start/End: Complemental strand, 21563001 - 21562881
Alignment:
Q  17 aaaccttaccatgagctaaa-ttcaatcatcatgacctctactatactttacataacaaaggaagatttttctacggccatgcaacataacaatttatgg 115  Q
    |||||||||||| || |||| |||| ||||||||||||||||||||||  |||||||||| || ||||||||||| ||||||||||||||||| || |||    
T  21563001 aaaccttaccatcagttaaaattcagtcatcatgacctctactatactccacataacaaaagacgatttttctacagccatgcaacataacaaattttgg 21562902  T
Q  116 tatacataatccactaacaattg 138  Q
      ||||||||||| |||||||||    
T  21562901 --tacataatccaataacaattg 21562881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 138
Target Start/End: Original strand, 24079524 - 24079644
Alignment:
Q  17 aaaccttaccatgagctaaa-ttcaatcatcatgacctctactatactttacataacaaaggaagatttttctacggccatgcaacataacaatttatgg 115  Q
    |||||||||||| || |||| |||| ||||||||||||||||||||||  |||||||||| || ||||||||||| ||||||||||||||||| || |||    
T  24079524 aaaccttaccatcagttaaaattcagtcatcatgacctctactatactccacataacaaaagacgatttttctacagccatgcaacataacaaattttgg 24079623  T
Q  116 tatacataatccactaacaattg 138  Q
      ||||||||||| |||||||||    
T  24079624 --tacataatccaataacaattg 24079644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 138
Target Start/End: Original strand, 26926396 - 26926516
Alignment:
Q  17 aaaccttaccatgagctaaa-ttcaatcatcatgacctctactatactttacataacaaaggaagatttttctacggccatgcaacataacaatttatgg 115  Q
    |||||||||||| || |||| |||| ||||||||||||||||||||||  |||||||||| || ||||||||||| ||||||||||||||||| || |||    
T  26926396 aaaccttaccatcagttaaaattcagtcatcatgacctctactatactccacataacaaaagacgatttttctacagccatgcaacataacaaattttgg 26926495  T
Q  116 tatacataatccactaacaattg 138  Q
      ||||||||||| |||||||||    
T  26926496 --tacataatccaataacaattg 26926516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 138
Target Start/End: Complemental strand, 43330522 - 43330402
Alignment:
Q  17 aaaccttaccatgagctaaa-ttcaatcatcatgacctctactatactttacataacaaaggaagatttttctacggccatgcaacataacaatttatgg 115  Q
    |||||||||||| || |||| |||| ||||||||||||||||||||||  |||||||||| || ||||||||||| ||||||||||||||||| || |||    
T  43330522 aaaccttaccatcagttaaaattcagtcatcatgacctctactatactccacataacaaaagacgatttttctacagccatgcaacataacaaattttgg 43330423  T
Q  116 tatacataatccactaacaattg 138  Q
      ||||||||||| |||||||||    
T  43330422 --tacataatccaataacaattg 43330402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 138
Target Start/End: Complemental strand, 51450588 - 51450468
Alignment:
Q  17 aaaccttaccatgagctaaa-ttcaatcatcatgacctctactatactttacataacaaaggaagatttttctacggccatgcaacataacaatttatgg 115  Q
    |||||||||||| || |||| |||| ||||||||||||||||||||||  |||||||||| || ||||||||||| ||||||||||||||||| || |||    
T  51450588 aaaccttaccatcagttaaaattcagtcatcatgacctctactatactccacataacaaaagacgatttttctacagccatgcaacataacaaattttgg 51450489  T
Q  116 tatacataatccactaacaattg 138  Q
      ||||||||||| |||||||||    
T  51450488 --tacataatccaataacaattg 51450468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 21 - 136
Target Start/End: Original strand, 35831446 - 35831560
Alignment:
Q  21 cttaccatgagctaaa-ttcaatcatcatgacctctactatactttacataacaaaggaagatttttctacggccatgcaacataacaatttatggtata 119  Q
    |||||||||||||||| |||||||||||| ||||||| ||||||  ||| || |||| ||||||||||||| ||||||||||||||||||||  ||  ||    
T  35831446 cttaccatgagctaaaattcaatcatcattacctctattatactccacaaaataaagaaagatttttctacagccatgcaacataacaatttcggg--ta 35831543  T
Q  120 cataatccactaacaat 136  Q
    ||||||||| |||||||    
T  35831544 cataatccattaacaat 35831560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 136
Target Start/End: Original strand, 29345826 - 29345892
Alignment:
Q  68 ataacaaaggaagatttttctacggccatgcaacataacaatttatggtatacataatccactaacaat 136  Q
    ||||||||||||||||||| ||| |||||||||||||||||| | | ||||  ||||||||||||||||    
T  29345826 ataacaaaggaagatttttttacagccatgcaacataacaatctctagtat--ataatccactaacaat 29345892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 136
Target Start/End: Original strand, 35831590 - 35831655
Alignment:
Q  68 ataacaaaggaagatttttctacggccatgcaacataacaatttatggtatacataatccactaacaat 136  Q
    ||||||||||||||||||| ||| |||||||||||||||||| | |||  |||||||||||||||||||    
T  35831590 ataacaaaggaagattttt-tacagccatgcaacataacaatctctgg--tacataatccactaacaat 35831655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 47722647 - 47722715
Alignment:
Q  17 aaaccttaccatgagctaaa-ttcaatcatcatgacctctactatactttacataacaaaggaagattt 84  Q
    ||||||||| |||||||||| ||||||||||||||||||||||| | |  ||||||||||| |||||||    
T  47722647 aaaccttacaatgagctaaaattcaatcatcatgacctctactaaattccacataacaaagtaagattt 47722715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 80; Significance: 1e-37; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 17 - 138
Target Start/End: Complemental strand, 49223669 - 49223549
Alignment:
Q  17 aaaccttaccatgagctaaa-ttcaatcatcatgacctctactatactttacataacaaaggaagatttttctacggccatgcaacataacaatttatgg 115  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||   ||||| |||||||||||||||||| |||||||||||||| |||||||||    
T  49223669 aaaccttaccatgagctaaaattcaatcatcatgacctctactatactccgcataataaaggaagatttttctacagccatgcaacataataatttatgg 49223570  T
Q  116 tatacataatccactaacaattg 138  Q
      |||||||||||||||||||||    
T  49223569 --tacataatccactaacaattg 49223549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 28568305 - 28568426
Alignment:
Q  17 aaaccttaccatgagctaaat-tcaatcatcatgacctctactatactttacataacaaaggaagatttttctacggccatgcaacataacaatttatgg 115  Q
    ||||||||||||||| ||||  ||||||||||||||||||||||||||  ||||||||||| |||||||||||||  ||||||||||||||||||| ||     
T  28568305 aaaccttaccatgagataaaaatcaatcatcatgacctctactatactccacataacaaagaaagatttttctacaaccatgcaacataacaatttctg- 28568403  T
Q  116 tatacataatccactaacaattga 139  Q
      ||||||||||||||||||||||    
T  28568404 -ttacataatccactaacaattga 28568426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 67 - 139
Target Start/End: Complemental strand, 17670454 - 17670384
Alignment:
Q  67 cataacaaaggaagatttttctacggccatgcaacataacaatttatggtatacataatccactaacaattga 139  Q
    |||||||||||||||||||||||| | |||||||||||||||||| |||  |||||||| |||||||||||||    
T  17670454 cataacaaaggaagatttttctacagtcatgcaacataacaatttctgg--tacataattcactaacaattga 17670384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 21728462 - 21728398
Alignment:
Q  17 aaaccttaccatgagctaaa-ttcaatcatcatgacctctactatactttacataacaaaggaag 80  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||  |||||||||| ||||    
T  21728462 aaaccttaccatgagctaaaattcaatcatcatgacttctactatactccacataacaaatgaag 21728398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 67 - 117
Target Start/End: Original strand, 16032700 - 16032750
Alignment:
Q  67 cataacaaaggaagatttttctacggccatgcaacataacaatttatggta 117  Q
    |||||||||||||||||||||||| |||||||||||||| ||||| |||||    
T  16032700 cataacaaaggaagatttttctacagccatgcaacataataatttctggta 16032750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 67 - 139
Target Start/End: Original strand, 12246421 - 12246491
Alignment:
Q  67 cataacaaaggaagatttttctacggccatgcaacataacaatttatggtatacataatccactaacaattga 139  Q
    |||||||||||||||||||||||| || |||||||| || ||||| |||  |||||||| |||||||||||||    
T  12246421 cataacaaaggaagatttttctacagctatgcaacacaataatttctgg--tacataattcactaacaattga 12246491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 136
Target Start/End: Complemental strand, 18091751 - 18091689
Alignment:
Q  72 caaaggaagatttttctacggccatgcaacataacaatttatggtatacataatccactaacaat 136  Q
    |||||||| ||||||| || |||||||||||||||||| | |||  |||||||||||||||||||    
T  18091751 caaaggaaaatttttccacagccatgcaacataacaatctctgg--tacataatccactaacaat 18091689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 139
Target Start/End: Complemental strand, 36680399 - 36680329
Alignment:
Q  67 cataacaaaggaagatttttctacggccatgcaacataacaatttatggtatacataatccactaacaattga 139  Q
    ||||||||| ||| |||||||||| | |||||||||||| ||||| |||  |||||||| |||||||||||||    
T  36680399 cataacaaatgaatatttttctacagtcatgcaacataataatttctgg--tacataattcactaacaattga 36680329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 139
Target Start/End: Complemental strand, 45003889 - 45003819
Alignment:
Q  67 cataacaaaggaagatttttctacggccatgcaacataacaatttatggtatacataatccactaacaattga 139  Q
    ||||||||| |||  ||||||||| |||||||||||||| ||||| |||  |||||||| |||||||||||||    
T  45003889 cataacaaatgaatgtttttctacagccatgcaacataataatttctgg--tacataattcactaacaattga 45003819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 18092089 - 18092044
Alignment:
Q  17 aaaccttaccatgagctaaa-ttcaatcatcatgacctctactata 61  Q
    |||||||||||||||||||| ||||||||||||||| ||| |||||    
T  18092089 aaaccttaccatgagctaaaattcaatcatcatgacatctgctata 18092044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 79; Significance: 4e-37; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 17 - 137
Target Start/End: Complemental strand, 47172149 - 47172030
Alignment:
Q  17 aaaccttaccatgagctaaa-ttcaatcatcatgacctctactatactttacataacaaaggaagatttttctacggccatgcaacataacaatttatgg 115  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| |  |||||||||||||||||||||||||  ||||||||||||||||||| |||    
T  47172149 aaaccttaccatgagctaaaattcaatcatcatgacctctactataatccacataacaaaggaagatttttctacaaccatgcaacataacaatttctgg 47172050  T
Q  116 tatacataatccactaacaatt 137  Q
      ||||||||||||||||||||    
T  47172049 --tacataatccactaacaatt 47172030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 21 - 138
Target Start/End: Original strand, 38435407 - 38435523
Alignment:
Q  21 cttaccatgagctaaa-ttcaatcatcatgacctctactatactttacataacaaaggaagatttttctacggccatgcaacataacaatttatggtata 119  Q
    |||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||  ||||||||||||| ||||| |||  ||    
T  38435407 cttaccatgagctaaaattcaatcatcatgacctctactatactccacataacaaaggaagatttttctacaaccatgcaacataaaaatttctgg--ta 38435504  T
Q  120 cataatccactaacaattg 138  Q
    |||||||||||||||||||    
T  38435505 cataatccactaacaattg 38435523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 21 - 138
Target Start/End: Complemental strand, 42995859 - 42995743
Alignment:
Q  21 cttaccatgagctaaa-ttcaatcatcatgacctctactatactttacataacaaaggaagatttttctacggccatgcaacataacaatttatggtata 119  Q
    |||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||  ||||||||||||| ||||| |||  ||    
T  42995859 cttaccatgagctaaaattcaatcatcatgacctctactatactccacataacaaaggaagatttttctacaaccatgcaacataaaaatttctgg--ta 42995762  T
Q  120 cataatccactaacaattg 138  Q
    |||||||||||||||||||    
T  42995761 cataatccactaacaattg 42995743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 4490588 - 4490709
Alignment:
Q  17 aaaccttaccatgagctaaa-ttcaatcatcatgacctctactatactttacataacaaaggaagatttttctacggccatgcaacataacaatttatgg 115  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| |  ||||||||||||||||||||||||| | |||||||||||||||| | |||    
T  4490588 aaaccttaccatgagctaaaattcaatcatcatgacctctactatattccacataacaaaggaagatttttctacagtcatgcaacataacaatatctgg 4490687  T
Q  116 tatacataatccactaacaattga 139  Q
      ||||||||||| ||||||||||    
T  4490688 --tacataatccattaacaattga 4490709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 138
Target Start/End: Original strand, 19035782 - 19035902
Alignment:
Q  17 aaaccttaccatgagctaaa-ttcaatcatcatgacctctactatactttacataacaaaggaagatttttctacggccatgcaacataacaatttatgg 115  Q
    |||||||||||| || |||| |||| ||||||||||||||||||||||  |||||||||| || ||||||||||| ||||||||||||||||| || |||    
T  19035782 aaaccttaccatcagttaaaattcagtcatcatgacctctactatactccacataacaaaagatgatttttctacagccatgcaacataacaaattttgg 19035881  T
Q  116 tatacataatccactaacaattg 138  Q
      ||||||||||| |||||||||    
T  19035882 --tacataatccaataacaattg 19035902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 138
Target Start/End: Complemental strand, 20718854 - 20718734
Alignment:
Q  17 aaaccttaccatgagctaaa-ttcaatcatcatgacctctactatactttacataacaaaggaagatttttctacggccatgcaacataacaatttatgg 115  Q
    |||||||||||| || |||| |||| ||||||||||||||||||||||  |||||||||| || ||||||||||| ||||||||||||||||| || |||    
T  20718854 aaaccttaccatcagttaaaattcagtcatcatgacctctactatactccacataacaaaagatgatttttctacagccatgcaacataacaaattttgg 20718755  T
Q  116 tatacataatccactaacaattg 138  Q
      ||||||||||| |||||||||    
T  20718754 --tacataatccaataacaattg 20718734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 138
Target Start/End: Complemental strand, 29489102 - 29488982
Alignment:
Q  17 aaaccttaccatgagctaaa-ttcaatcatcatgacctctactatactttacataacaaaggaagatttttctacggccatgcaacataacaatttatgg 115  Q
    |||||||||||| || |||| |||| ||||||||||||||||||||||  |||||||||| || ||||||||||| ||||||||||||||||| || |||    
T  29489102 aaaccttaccatcagttaaaattcagtcatcatgacctctactatactccacataacaaaagatgatttttctacagccatgcaacataacaaattttgg 29489003  T
Q  116 tatacataatccactaacaattg 138  Q
      ||||||||||| |||||||||    
T  29489002 --tacataatccaataacaattg 29488982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 138
Target Start/End: Original strand, 33232082 - 33232202
Alignment:
Q  17 aaaccttaccatgagctaaa-ttcaatcatcatgacctctactatactttacataacaaaggaagatttttctacggccatgcaacataacaatttatgg 115  Q
    |||||||||||| || |||| |||| ||||||||||||||||||||||  |||||||||| || ||||||||||| ||||||||||||||||| || |||    
T  33232082 aaaccttaccatcagttaaaattcagtcatcatgacctctactatactccacataacaaaagacgatttttctacagccatgcaacataacaaattttgg 33232181  T
Q  116 tatacataatccactaacaattg 138  Q
      ||||||||||| |||||||||    
T  33232182 --tacataatccaataacaattg 33232202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 138
Target Start/End: Original strand, 34284225 - 34284345
Alignment:
Q  17 aaaccttaccatgagctaaa-ttcaatcatcatgacctctactatactttacataacaaaggaagatttttctacggccatgcaacataacaatttatgg 115  Q
    |||||||||||| || |||| |||| ||||||||||||||||||||||  |||||||||| || ||||||||||| ||||||||||||||||| || |||    
T  34284225 aaaccttaccatcagttaaaattcagtcatcatgacctctactatactccacataacaaaagacgatttttctacagccatgcaacataacaaattttgg 34284324  T
Q  116 tatacataatccactaacaattg 138  Q
      ||||||||||| |||||||||    
T  34284325 --tacataatccaataacaattg 34284345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 34 - 138
Target Start/End: Complemental strand, 20763506 - 20763404
Alignment:
Q  34 aaattcaatcatcatgacctctactatactttacataacaaaggaagatttttctacggccatgcaacataacaatttatggtatacataatccactaac 133  Q
    ||||||| ||||||||||||||||||||||  |||||||||| || ||||||||||| ||||||||||||||||| || |||  ||||||||||| ||||    
T  20763506 aaattcagtcatcatgacctctactatactccacataacaaaagacgatttttctacagccatgcaacataacaaattttgg--tacataatccaataac 20763409  T
Q  134 aattg 138  Q
    |||||    
T  20763408 aattg 20763404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 46197988 - 46197903
Alignment:
Q  21 cttaccatgagctaaa-ttcaatcatcatgacctctactatactttacataacaaaggaagatttttctacggccatgcaacataa 105  Q
    |||||||||||||||| |||||||||||| ||||||| ||||||  |||||||||||||| |||||||||| ||||||||||||||    
T  46197988 cttaccatgagctaaaattcaatcatcattacctctattatactccacataacaaaggaatatttttctacagccatgcaacataa 46197903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 67 - 139
Target Start/End: Original strand, 42828487 - 42828557
Alignment:
Q  67 cataacaaaggaagatttttctacggccatgcaacataacaatttatggtatacataatccactaacaattga 139  Q
    ||||||||||||||||||||||||  ||||||||||||| ||||| |||  |||||||| |||||||||||||    
T  42828487 cataacaaaggaagatttttctacaaccatgcaacataataatttctgg--tacataattcactaacaattga 42828557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 41056494 - 41056448
Alignment:
Q  17 aaaccttaccatgagctaaa--ttcaatcatcatgacctctactata 61  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||    
T  41056494 aaaccttaccatgagctaaaaattcaatcatcatgacctctactata 41056448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 136
Target Start/End: Complemental strand, 41055033 - 41054972
Alignment:
Q  73 aaaggaagatttttctacggccatgcaacataacaatttatggtatacataatccactaacaat 136  Q
    ||||||||||||||||||  | |||||| |||||||| | |||  |||||||||||||||||||    
T  41055033 aaaggaagatttttctacaacaatgcaatataacaatctttgg--tacataatccactaacaat 41054972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 21 - 138
Target Start/End: Complemental strand, 741 - 625
Alignment:
Q  21 cttaccatgagctaaa-ttcaatcatcatgacctctactatactttacataacaaaggaagatttttctacggccatgcaacataacaatttatggtata 119  Q
    |||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||  ||||||||||||| ||||| |||  ||    
T  741 cttaccatgagctaaaattcaatcatcatgacctctactatactccacataacaaaggaagatttttctacaaccatgcaacataaaaatttctgg--ta 644  T
Q  120 cataatccactaacaattg 138  Q
    |||||||||||||||||||    
T  643 cataatccactaacaattg 625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 21 - 138
Target Start/End: Original strand, 54953 - 55069
Alignment:
Q  21 cttaccatgagctaaa-ttcaatcatcatgacctctactatactttacataacaaaggaagatttttctacggccatgcaacataacaatttatggtata 119  Q
    |||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||  ||||||||||||| ||||| |||  ||    
T  54953 cttaccatgagctaaaattcaatcatcatgacctctactatactccacataacaaaggaagatttttctacaaccatgcaacataaaaatttctgg--ta 55050  T
Q  120 cataatccactaacaattg 138  Q
    |||||||||||||||||||    
T  55051 cataatccactaacaattg 55069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 76; Significance: 3e-35; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 21 - 138
Target Start/End: Original strand, 12251035 - 12251151
Alignment:
Q  21 cttaccatgagctaaa-ttcaatcatcatgacctctactatactttacataacaaaggaagatttttctacggccatgcaacataacaatttatggtata 119  Q
    |||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||  ||||||||||||| ||||| |||  ||    
T  12251035 cttaccatgagctaaaattcaatcatcatgacctctactatactccacataacaaaggaagatttttctacaaccatgcaacataaaaatttctgg--ta 12251132  T
Q  120 cataatccactaacaattg 138  Q
    |||||||||||||||||||    
T  12251133 cataatccactaacaattg 12251151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 21 - 138
Target Start/End: Original strand, 23620438 - 23620554
Alignment:
Q  21 cttaccatgagctaaa-ttcaatcatcatgacctctactatactttacataacaaaggaagatttttctacggccatgcaacataacaatttatggtata 119  Q
    |||||||||||||||| |||||||||||||| ||||||||||||  ||||||||||||||||||||||||| |||||||||||||| ||||| |||  ||    
T  23620438 cttaccatgagctaaaattcaatcatcatgatctctactatactccacataacaaaggaagatttttctacagccatgcaacataaaaatttttgg--ta 23620535  T
Q  120 cataatccactaacaattg 138  Q
    |||||||||||||||||||    
T  23620536 cataatccactaacaattg 23620554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 21 - 138
Target Start/End: Complemental strand, 39444172 - 39444056
Alignment:
Q  21 cttaccatgagctaaa-ttcaatcatcatgacctctactatactttacataacaaaggaagatttttctacggccatgcaacataacaatttatggtata 119  Q
    |||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||  ||||||||||||| ||||| |||  ||    
T  39444172 cttaccatgagctaaaattcaatcatcatgacctctactatactccacataacaaaggaagatttttctacaaccatgcaacataaaaatttctgg--ta 39444075  T
Q  120 cataatccactaacaattg 138  Q
    |||||||||||||||||||    
T  39444074 cataatccactaacaattg 39444056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 17 - 135
Target Start/End: Complemental strand, 29431754 - 29431637
Alignment:
Q  17 aaaccttaccatgagctaaa-ttcaatcatcatgacctctactatactttacataacaaaggaagatttttctacggccatgcaacataacaatttatgg 115  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||||  |||||||||| ||| |||||||||| | |||||||||||||||||| |||    
T  29431754 aaaccttaccatgaactaaaattcaatcatcatgacctctactatactccacataacaaatgaatatttttctacagacatgcaacataacaatttctgg 29431655  T
Q  116 tatacataatccactaacaa 135  Q
      ||||||||||||||||||    
T  29431654 --tacataatccactaacaa 29431637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 39202046 - 39201925
Alignment:
Q  17 aaaccttaccatgagctaaa-ttcaatcatcatgacctctactatactttacataacaaaggaagatttttctacggccatgcaacataacaatttatgg 115  Q
    |||||||||||||| ||||| |||||||||||||||||||| ||||||  |||| ||||||||| |||||||||| | ||||||||||||||||||||      
T  39202046 aaaccttaccatgatctaaaattcaatcatcatgacctctattatactccacatgacaaaggaaaatttttctacagtcatgcaacataacaatttat-- 39201949  T
Q  116 tatacataatccactaacaattga 139  Q
    | ||||||||||||||||||||||    
T  39201948 tgtacataatccactaacaattga 39201925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 41905270 - 41905142
Alignment:
Q  17 aaaccttaccatgagctaaa-ttcaatcatcatga-------cctctactatactttacataacaaaggaagatttttctacggccatgcaacataacaa 108  Q
    |||||||||||||||||||| ||||||||||||||       | |||||||||||  |||||||||||||||||||||||||  ||||||||||||||||    
T  41905270 aaaccttaccatgagctaaaattcaatcatcatgattcatgacatctactatactccacataacaaaggaagatttttctacaaccatgcaacataacaa 41905171  T
Q  109 tttatggtatacataatccactaacaattga 139  Q
    |||||||  ||||||||||||||||||||||    
T  41905170 tttatgg--tacataatccactaacaattga 41905142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 138
Target Start/End: Original strand, 20665048 - 20665168
Alignment:
Q  17 aaaccttaccatgagctaaa-ttcaatcatcatgacctctactatactttacataacaaaggaagatttttctacggccatgcaacataacaatttatgg 115  Q
    |||||||||||| || |||| |||| ||||||||||||||||||||||  |||||||||| || ||||||||||| ||||||||||||||||| || |||    
T  20665048 aaaccttaccatcagttaaaattcagtcatcatgacctctactatactccacataacaaaagacgatttttctacagccatgcaacataacaaattttgg 20665147  T
Q  116 tatacataatccactaacaattg 138  Q
      ||||||||||| |||||||||    
T  20665148 --tacataatccaataacaattg 20665168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 138
Target Start/End: Original strand, 30550414 - 30550534
Alignment:
Q  17 aaaccttaccatgagctaaa-ttcaatcatcatgacctctactatactttacataacaaaggaagatttttctacggccatgcaacataacaatttatgg 115  Q
    |||||||||||| || |||| |||| ||||||||||||||||||||||  |||||||||| || ||||||||||| ||||||||||||||||| || |||    
T  30550414 aaaccttaccatcagttaaaattcagtcatcatgacctctactatactccacataacaaaagacgatttttctacagccatgcaacataacaaattttgg 30550513  T
Q  116 tatacataatccactaacaattg 138  Q
      ||||||||||| |||||||||    
T  30550514 --tacataatccaataacaattg 30550534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 34 - 138
Target Start/End: Original strand, 44215182 - 44215284
Alignment:
Q  34 aaattcaatcatcatgacctctactatactttacataacaaaggaagatttttctacggccatgcaacataacaatttatggtatacataatccactaac 133  Q
    ||||||| ||||||||||||||||||||||  |||||||||| || ||||||||||| ||||||||||||||||| || |||  ||||||||||| ||||    
T  44215182 aaattcagtcatcatgacctctactatactccacataacaaaagacgatttttctacagccatgcaacataacaaattttgg--tacataatccaataac 44215279  T
Q  134 aattg 138  Q
    |||||    
T  44215280 aattg 44215284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 68 - 139
Target Start/End: Original strand, 22947359 - 22947428
Alignment:
Q  68 ataacaaaggaagatttttctacggccatgcaacataacaatttatggtatacataatccactaacaattga 139  Q
    |||||||||||||||||||||||  |||||||||| || ||||| |||  |||||||| |||||||||||||    
T  22947359 ataacaaaggaagatttttctacaaccatgcaacacaataatttctgg--tacataattcactaacaattga 22947428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 76; Significance: 3e-35; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 21 - 138
Target Start/End: Complemental strand, 9700507 - 9700391
Alignment:
Q  21 cttaccatgagctaaa-ttcaatcatcatgacctctactatactttacataacaaaggaagatttttctacggccatgcaacataacaatttatggtata 119  Q
    |||||||||||||||| |||||||||||||| ||||||||||||  ||||||||||||||||||||||||  |||||||||||||| |||||||||  ||    
T  9700507 cttaccatgagctaaaattcaatcatcatgatctctactatactccacataacaaaggaagatttttctatagccatgcaacataaaaatttatgg--ta 9700410  T
Q  120 cataatccactaacaattg 138  Q
    |||||||||||||||||||    
T  9700409 cataatccactaacaattg 9700391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 18040743 - 18040864
Alignment:
Q  17 aaaccttaccatgagctaaa-ttcaatcatcatgacctctactatactttacataacaaaggaagatttttctacggccatgcaacataacaatttatgg 115  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||||  |||||||||| |||||||||||||| | |||||| |||||||||||||||    
T  18040743 aaacattaccatgagctaaaattcaatcatcatgacctctactatactccacataacaaatgaagatttttctacagtcatgcagcataacaatttatgg 18040842  T
Q  116 tatacataatccactaacaattga 139  Q
       |||||||||||||||||||||    
T  18040843 --aacataatccactaacaattga 18040864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 139
Target Start/End: Original strand, 3212788 - 3212905
Alignment:
Q  21 cttaccatgagctaaa-ttcaatcatcatgacctctactatactttacataacaaaggaagatttttctacggccatgcaacataacaatttatggtata 119  Q
    |||||||||| ||||| |||||||||||||||||||| ||||||  |||| |||||||| ||||||||||| | |||||||||||||||||| ||  |||    
T  3212788 cttaccatgatctaaaattcaatcatcatgacctctattatactccacatgacaaaggaggatttttctacagtcatgcaacataacaatttctg--ata 3212885  T
Q  120 cataatccactaacaattga 139  Q
    ||||||||||||||||||||    
T  3212886 cataatccactaacaattga 3212905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 17 - 138
Target Start/End: Complemental strand, 37462489 - 37462369
Alignment:
Q  17 aaaccttaccatgagctaaa-ttcaatcatcatgacctctactatactttacataacaaaggaagatttttctacggccatgcaacataacaatttatgg 115  Q
    |||||||||||| || |||| |||| ||||||||||||||||||||||  | |||||||| || ||||||||||| ||||||||||||||||| || |||    
T  37462489 aaaccttaccatcagttaaaattcagtcatcatgacctctactatactccatataacaaaagacgatttttctacagccatgcaacataacaaattttgg 37462390  T
Q  116 tatacataatccactaacaattg 138  Q
      ||||||||||| |||||||||    
T  37462389 --tacataatccaataacaattg 37462369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 67 - 139
Target Start/End: Complemental strand, 33929443 - 33929373
Alignment:
Q  67 cataacaaaggaagatttttctacggccatgcaacataacaatttatggtatacataatccactaacaattga 139  Q
    |||||||||||||||||||||||| ||||||||||| || |||||||||  |||||||| |||||||||||||    
T  33929443 cataacaaaggaagatttttctacagccatgcaacacaataatttatgg--tacataattcactaacaattga 33929373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 73; Significance: 2e-33; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 3090430 - 3090550
Alignment:
Q  17 aaaccttaccatgagctaaa-ttcaatcatcatgacctctactatactttacataacaaaggaagatttttctacggccatgcaacataacaatttatgg 115  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||||  ||||||||||||||||||||| ||| |||||||||||||| |||||||||    
T  3090430 aaaccttac-atgagctaaaattcaatcatcatgacctctactatactccacataacaaaggaagatttttatacagccatgcaacataaaaatttatgg 3090528  T
Q  116 tatacataatccactaacaattga 139  Q
      |||||||||||| |||||||||    
T  3090529 --tacataatccacaaacaattga 3090550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 34 - 139
Target Start/End: Original strand, 3053526 - 3053629
Alignment:
Q  34 aaattcaatcatcatgacctctactatactttacataacaaaggaagatttttctacggccatgcaacataacaatttatggtatacataatccactaac 133  Q
    ||||||||||||||||||||||||||||||  |||||||||| ||||||||| |||| ||||||||||||||||||||||||  |||| ||||||||||     
T  3053526 aaattcaatcatcatgacctctactatactccacataacaaatgaagattttcctacagccatgcaacataacaatttatgg--tacacaatccactaat 3053623  T
Q  134 aattga 139  Q
    ||||||    
T  3053624 aattga 3053629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 34 - 138
Target Start/End: Complemental strand, 33976594 - 33976492
Alignment:
Q  34 aaattcaatcatcatgacctctactatactttacataacaaaggaagatttttctacggccatgcaacataacaatttatggtatacataatccactaac 133  Q
    ||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||  ||||||||||||||||||| |||  ||||||||||| ||||    
T  33976594 aaattcagtcatcatgacctctactatactccacataacaaaggaagatttttctacaaccatgcaacataacaatttttgg--tacataatccaataac 33976497  T
Q  134 aattg 138  Q
    |||||    
T  33976496 aattg 33976492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 138
Target Start/End: Complemental strand, 248035 - 247915
Alignment:
Q  17 aaaccttaccatgagctaaa-ttcaatcatcatgacctctactatactttacataacaaaggaagatttttctacggccatgcaacataacaatttatgg 115  Q
    |||||||||||| || |||| |||| ||||||||||||||||||||||  |||||||||| || ||||||||||| ||||||||||||||||| || |||    
T  248035 aaaccttaccatcagttaaaattcagtcatcatgacctctactatactccacataacaaaagacgatttttctacagccatgcaacataacaaattttgg 247936  T
Q  116 tatacataatccactaacaattg 138  Q
      ||||||||||| |||||||||    
T  247935 --tacataatccaataacaattg 247915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 137
Target Start/End: Original strand, 12581918 - 12582032
Alignment:
Q  17 aaaccttaccatgagctaaa-ttcaatcatcatgacctctactatactttacataacaaaggaagatttttctacggccatgcaacataacaatttatgg 115  Q
    |||||||||||| || |||| |||| |||||||||||||||||  ||     |||||||| || ||||||||||| ||||||||||||||||| || |||    
T  12581918 aaaccttaccatcagttaaaattcagtcatcatgacctctactccac-----ataacaaaagacgatttttctacagccatgcaacataacaaattttgg 12582012  T
Q  116 tatacataatccactaacaatt 137  Q
      ||||||||||| ||||||||    
T  12582013 --tacataatccaataacaatt 12582032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 67 - 139
Target Start/End: Original strand, 28229582 - 28229652
Alignment:
Q  67 cataacaaaggaagatttttctacggccatgcaacataacaatttatggtatacataatccactaacaattga 139  Q
    |||||||||||||||||||||||  |||||||||||||| ||||| |  | |||||||| |||||||||||||    
T  28229582 cataacaaaggaagatttttctagagccatgcaacataataatttct--tgtacataattcactaacaattga 28229652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 84
Target Start/End: Complemental strand, 1931264 - 1931196
Alignment:
Q  17 aaaccttaccatgagctaaa-ttcaatcatcatgacctctactatactttacataacaaaggaagattt 84  Q
    |||||||||||  ||||||| ||||||||||||||  |||||||||||  ||||||||||| |||||||    
T  1931264 aaaccttaccacaagctaaaattcaatcatcatgatgtctactatactccacataacaaagtaagattt 1931196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 71; Significance: 3e-32; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 17 - 137
Target Start/End: Complemental strand, 8239422 - 8239303
Alignment:
Q  17 aaaccttaccatgagctaaa-ttcaatcatcatgacctctactatactttacataacaaaggaagatttttctacggccatgcaacataacaatttatgg 115  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||||||| ||| | ||||||||| || ||||| |||    
T  8239422 aaaccttaccatgagctaaaattcaatcatcatgacctctactatactccacataacaaaggaagatttttttacaggcatgcaacaaaataatttttgg 8239323  T
Q  116 tatacataatccactaacaatt 137  Q
      ||||||||||||||||||||    
T  8239322 --tacataatccactaacaatt 8239303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 52464524 - 52464645
Alignment:
Q  17 aaaccttaccatgagctaaa-ttcaatcatcatgacctctactatactttacataacaaaggaagatttttctacggccatgcaacataacaatttatgg 115  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||||  |||||||||||||| | |||||||| |  ||||||||||||||||| |||    
T  52464524 aaaccttaccatgaactaaaattcaatcatcatgacctctactatactccacataacaaaggaaaaattttctacagttatgcaacataacaatttctgg 52464623  T
Q  116 tatacataatccactaacaattga 139  Q
      ||||||||||||||||||||||    
T  52464624 --tacataatccactaacaattga 52464645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 17 - 138
Target Start/End: Original strand, 44074842 - 44074962
Alignment:
Q  17 aaaccttaccatgagctaaa-ttcaatcatcatgacctctactatactttacataacaaaggaagatttttctacggccatgcaacataacaatttatgg 115  Q
    |||||||||||| || |||| |||| ||||||||||||||||||||||  |||||||||| || |||||||||||  |||||||||||||||| || |||    
T  44074842 aaaccttaccatcagttaaaattcagtcatcatgacctctactatactccacataacaaaagacgatttttctacaaccatgcaacataacaaattttgg 44074941  T
Q  116 tatacataatccactaacaattg 138  Q
      ||||||||||| |||||||||    
T  44074942 --tacataatccaataacaattg 44074962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 138
Target Start/End: Complemental strand, 916822 - 916702
Alignment:
Q  17 aaaccttaccatgagctaaa-ttcaatcatcatgacctctactatactttacataacaaaggaagatttttctacggccatgcaacataacaatttatgg 115  Q
    |||||||||||| || |||| || | ||||||||||||||||||||||  | |||||||| || ||||||||||| ||||||||||||||||| || |||    
T  916822 aaaccttaccatcagttaaaattgagtcatcatgacctctactatactccatataacaaaagacgatttttctacagccatgcaacataacaaattttgg 916723  T
Q  116 tatacataatccactaacaattg 138  Q
      ||||||||||| |||||||||    
T  916722 --tacataatccaataacaattg 916702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 54795591 - 54795706
Alignment:
Q  17 aaaccttaccatgagctaaat-tcaatcatcatgacctctactatactttacataacaaaggaagatttttctacggccatgcaacataacaatttatgg 115  Q
    ||||||||||||||| ||||  ||||||||||||||||||||||||||  |||||||||  |||||||||||||    |||||||||||||||||| | |    
T  54795591 aaaccttaccatgagataaaaatcaatcatcatgacctctactatactccacataacaa--gaagatttttcta----catgcaacataacaatttttag 54795684  T
Q  116 tatacataatccactaacaattga 139  Q
       |||||||||||||||||||||    
T  54795685 --cacataatccactaacaattga 54795706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 12170535 - 12170603
Alignment:
Q  17 aaaccttaccatgagctaaa-ttcaatcatcatgacctctactatactttacataacaaaggaagattt 84  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||  ||||||||||| |||||||    
T  12170535 aaaccttaccacgagctaaaattcaatcatcatgacctctactatactccacataacaaagtaagattt 12170603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 36170046 - 36170113
Alignment:
Q  17 aaaccttaccatgagctaaa-ttcaatcatcatgacctctactatactttacataacaaaggaagatt 83  Q
    |||||||| || |||||||| |||||||||||||||||||||||||||  ||||||||||| ||||||    
T  36170046 aaaccttatcaggagctaaaattcaatcatcatgacctctactatactccacataacaaagtaagatt 36170113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 136
Target Start/End: Original strand, 42617307 - 42617369
Alignment:
Q  72 caaaggaagatttttctacggccatgcaacataacaatttatggtatacataatccactaacaat 136  Q
    ||||||||||||||||||| | |||||||||||||||| | |||  |||||||||||||||||||    
T  42617307 caaaggaagatttttctacagtcatgcaacataacaatctctgg--tacataatccactaacaat 42617369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 47 - 138
Target Start/End: Original strand, 28169755 - 28169844
Alignment:
Q  47 atgacctctactatactttacataacaaaggaagatttttctacggccatgcaacataacaatttatggtatacataatccactaacaattg 138  Q
    |||||||||||||||||  |||  ||||| ||||||||||||||   |||||| ||||||||||| |||  ||||||||||||||| |||||    
T  28169755 atgacctctactatactccacactacaaaagaagatttttctacactcatgcagcataacaatttctgg--tacataatccactaaaaattg 28169844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 11381512 - 11381467
Alignment:
Q  17 aaaccttaccatgagctaaa-ttcaatcatcatgacctctactata 61  Q
    ||||||||||||||| |||| |||||||||||||||||||||||||    
T  11381512 aaaccttaccatgagttaaaattcaatcatcatgacctctactata 11381467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 139
Target Start/End: Complemental strand, 32754613 - 32754543
Alignment:
Q  67 cataacaaaggaagatttttctacggccatgcaacataacaatttatggtatacataatccactaacaattga 139  Q
    |||||||||| ||| ||||||||| |||||| ||||||| ||||| |||||  |||||| |||||||||||||    
T  32754613 cataacaaagaaaggtttttctacagccatggaacataataatttctggta--cataattcactaacaattga 32754543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 42616976 - 42617017
Alignment:
Q  21 cttaccatgagctaaa-ttcaatcatcatgacctctactata 61  Q
    |||||||||| ||||| |||||||||||||||||||||||||    
T  42616976 cttaccatgaactaaaattcaatcatcatgacctctactata 42617017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 156133 - 156254
Alignment:
Q  17 aaaccttaccatgagctaaat-tcaatcatcatgacctctactatactttacataacaaaggaagatttttctacggccatgcaacataacaatttatgg 115  Q
    ||||||||||||||  ||||  ||||||| ||||||||||||||||||  ||||||||||| ||||||||||||  |||||||||||||| ||||| |||    
T  156133 aaaccttaccatgaaataaaaatcaatcaccatgacctctactatactccacataacaaagaaagatttttctatagccatgcaacataaaaatttctgg 156232  T
Q  116 tatacataatccactaacaattga 139  Q
      ||||||||||||||||||||||    
T  156233 --tacataatccactaacaattga 156254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 1e-25; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 138
Target Start/End: Complemental strand, 3709069 - 3708949
Alignment:
Q  17 aaaccttaccatgagctaaa-ttcaatcatcatgacctctactatactttacataacaaaggaagatttttctacggccatgcaacataacaatttatgg 115  Q
    |||||||||||| || |||| |||| ||||||||||||||||||||||  |||||||||| || ||||||||||| ||||||||||||||||| || |||    
T  3709069 aaaccttaccatcagttaaaattcagtcatcatgacctctactatactccacataacaaaagacgatttttctacagccatgcaacataacaaattttgg 3708970  T
Q  116 tatacataatccactaacaattg 138  Q
      ||||||||||| |||||||||    
T  3708969 --tacataatccaataacaattg 3708949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 138
Target Start/End: Original strand, 11868347 - 11868467
Alignment:
Q  17 aaaccttaccatgagctaaa-ttcaatcatcatgacctctactatactttacataacaaaggaagatttttctacggccatgcaacataacaatttatgg 115  Q
    |||||||||||| || |||| |||| ||||||||||||||||||||||  |||||||||| || ||||||||||| ||||||||||||||||| || |||    
T  11868347 aaaccttaccatcagttaaaattcagtcatcatgacctctactatactccacataacaaaagacgatttttctacagccatgcaacataacaaattttgg 11868446  T
Q  116 tatacataatccactaacaattg 138  Q
      ||||||||||| |||||||||    
T  11868447 --tacataatccaataacaattg 11868467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 138
Target Start/End: Original strand, 35359740 - 35359860
Alignment:
Q  17 aaaccttaccatgagctaaa-ttcaatcatcatgacctctactatactttacataacaaaggaagatttttctacggccatgcaacataacaatttatgg 115  Q
    |||||||||||| || |||| |||| ||||||||||||||||||||||  |||||||||| || ||||||||||| ||||||||||||||||| || |||    
T  35359740 aaaccttaccatcagttaaaattcagtcatcatgacctctactatactccacataacaaaagacgatttttctacagccatgcaacataacaaattttgg 35359839  T
Q  116 tatacataatccactaacaattg 138  Q
      ||||||||||| |||||||||    
T  35359840 --tacataatccaataacaattg 35359860  T

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Target: chr2; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 14750863 - 14750803
Alignment:
Q  17 aaaccttaccatgagctaaa-ttcaatcatcatgacctctactatactttacataacaaag 76  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||    
T  14750863 aaaccttaccatgagctaaaattcaatcatcatgacctctactatactccacataacaaag 14750803  T

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Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 67 - 136
Target Start/End: Original strand, 28381074 - 28381141
Alignment:
Q  67 cataacaaaggaagatttttctacggccatgcaacataacaatttatggtatacataatccactaacaat 136  Q
    ||||||||| |||||||||||||| |||||||||||||| ||||| |||  |||||||| ||||||||||    
T  28381074 cataacaaaagaagatttttctacagccatgcaacataataatttctgg--tacataattcactaacaat 28381141  T

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Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 67 - 139
Target Start/End: Complemental strand, 45397962 - 45397892
Alignment:
Q  67 cataacaaaggaagatttttctacggccatgcaacataacaatttatggtatacataatccactaacaattga 139  Q
    ||||||||| ||||||||||||||  ||||||||||||| ||||| |||  |||||||| |||||||||||||    
T  45397962 cataacaaaagaagatttttctacaaccatgcaacataataatttctgg--tacataattcactaacaattga 45397892  T

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Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 139
Target Start/End: Original strand, 35286913 - 35286983
Alignment:
Q  67 cataacaaaggaagatttttctacggccatgcaacataacaatttatggtatacataatccactaacaattga 139  Q
    |||||||||| ||||||||||||| | ||||||||| || ||||| |||  |||||||| |||||||||||||    
T  35286913 cataacaaagaaagatttttctacagtcatgcaacacaataatttctgg--tacataattcactaacaattga 35286983  T

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Target: scaffold0010 (Bit Score: 57; Significance: 6e-24; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 34 - 137
Target Start/End: Complemental strand, 50722 - 50621
Alignment:
Q  34 aaattcaatcatcatgacctctactatactttacataacaaaggaagatttttctacggccatgcaacataacaatttatggtatacataatccactaac 133  Q
    ||||||||||||||||||||||||||||    ||||||||||||||||||||||||| |||||||||| ||||||||| |||  || |||||||| ||||    
T  50722 aaattcaatcatcatgacctctactatatgccacataacaaaggaagatttttctacagccatgcaacttaacaatttctgg--taaataatccattaac 50625  T
Q  134 aatt 137  Q
    ||||    
T  50624 aatt 50621  T

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Target: scaffold0010; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 34 - 137
Target Start/End: Complemental strand, 58255 - 58154
Alignment:
Q  34 aaattcaatcatcatgacctctactatactttacataacaaaggaagatttttctacggccatgcaacataacaatttatggtatacataatccactaac 133  Q
    ||||||||||||||||||||||||||||    ||||||||||||||||||||||||| |||||||||| ||||||||| |||  || |||||||| ||||    
T  58255 aaattcaatcatcatgacctctactatatgccacataacaaaggaagatttttctacagccatgcaacttaacaatttctgg--taaataatccattaac 58158  T
Q  134 aatt 137  Q
    ||||    
T  58157 aatt 58154  T

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Target: scaffold0038 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 67 - 139
Target Start/End: Original strand, 30080 - 30150
Alignment:
Q  67 cataacaaaggaagatttttctacggccatgcaacataacaatttatggtatacataatccactaacaattga 139  Q
    |||||||||||||||||||||||  |||||||||||||| ||||| |  | |||||||| |||||||||||||    
T  30080 cataacaaaggaagatttttctagagccatgcaacataataatttct--tgtacataattcactaacaattga 30150  T

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Target: scaffold0051 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 21 - 76
Target Start/End: Complemental strand, 63105 - 63049
Alignment:
Q  21 cttaccatgagctaaa-ttcaatcatcatgacctctactatactttacataacaaag 76  Q
    ||||||| |||||||| |||||||||||||||||||||||||||  |||||||||||    
T  63105 cttaccacgagctaaaattcaatcatcatgacctctactatactccacataacaaag 63049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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