View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15428_low_7 (Length: 556)
Name: NF15428_low_7
Description: NF15428
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15428_low_7 |
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Alignment Details
Target: chr7 (Bit Score: 434; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 434; E-Value: 0
Query Start/End: Original strand, 14 - 538
Target Start/End: Original strand, 6968216 - 6968755
Alignment:
| Q |
14 |
gatgaacattcaatgagataataaagatatttccctgatgttacaaggtgtcagcaaggaaaagtaacacaactctatgaatcaatgacacatatacgga |
113 |
Q |
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| T |
6968216 |
gatgaacattcaatgagataataaagatatttccctgatgttacaaggtgtcagcaaggaaaagtaacacaactctatgaatcaatgacacatatacgga |
6968315 |
T |
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| Q |
114 |
cacgacattgatactaacacaaagttagtgataataattttagaaagtaataaaatcagagtcgtgtcagaca---------------ttggacacacct |
198 |
Q |
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| T |
6968316 |
cacgacattgatactaacacaaagtgagtgataataattttagaaagtaataaaatcagagtcgtgtcagacattgacacgtttgacattggacacacct |
6968415 |
T |
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| Q |
199 |
ttgatctgaactacatagattatgttcaccagcaacgacgttgcaaccatgcacattacacaaagtttgatctgatcttggaatttcaagacacttattt |
298 |
Q |
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| T |
6968416 |
ttgatctgaactacatagattatgttcaccagcaatgactttataaccatgcacactacacaaagtttgatctgatcttgggatttcaagacactaattt |
6968515 |
T |
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| Q |
299 |
actgatatcactatcagtaggtgaacacggttctggtatagtgaagatatagcaagtggagatcaccgcagaaaataatcatgcatatttattaaaatag |
398 |
Q |
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| T |
6968516 |
actgttatcactatcagtaggtgaacacggttctggtatagtgaaaatatagcaagtggagatcaccgcagaaaataatcatgaatatttattaaaatag |
6968615 |
T |
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| Q |
399 |
aacattttggggtgccaaggttagaatctatatagcgtgaaaccttcaagttcaaggtgtgttcggtgtttgacaccaacacaatagctagttatgtttt |
498 |
Q |
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| T |
6968616 |
aacattttggggtgccaaggttagaatctatataacgcgaaaccttcaagttcaaggtgtgttctgtgtttgacaccaacacaatagctagttatgtttt |
6968715 |
T |
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| Q |
499 |
tcttaaattattaccgatgtctatgtgtcagtgacaatat |
538 |
Q |
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| T |
6968716 |
tcttaaattattaccgatgtctatgtgtcagtgacaatat |
6968755 |
T |
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