View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15429_high_10 (Length: 235)
Name: NF15429_high_10
Description: NF15429
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15429_high_10 |
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Alignment Details
Target: chr8 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 425819 - 425598
Alignment:
| Q |
1 |
accatctatatttttaattccccttagtaacaatttttagcttgtagttacatatatttatctctcacattaaattggttccctcaaaataattaattat |
100 |
Q |
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|
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| T |
425819 |
accatctatatttttaattccccttagtaacaatttttagcttgtagttacatatatttatctctcacattaaattggttcactcaaaataattaattat |
425720 |
T |
|
| Q |
101 |
catcgatattaccgtaaggtccgaactagataatcaaaatatgaagctcacctaattaaactatgccaaaccacgatttgacatgtacaaattaacttca |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||||||| ||||||||||| |
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| T |
425719 |
tatcgatattaccgtaaggtccgaactagataatcaaaatatgaagctgacctaattcaactatgccaaaacacgatttgacatgtaccaattaacttca |
425620 |
T |
|
| Q |
201 |
cggaattaaataccatggaagt |
222 |
Q |
| |
|
|||||||||||||||||||||| |
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| T |
425619 |
cggaattaaataccatggaagt |
425598 |
T |
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