View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15429_high_5 (Length: 345)
Name: NF15429_high_5
Description: NF15429
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15429_high_5 |
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Alignment Details
Target: chr4 (Bit Score: 299; Significance: 1e-168; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 1 - 327
Target Start/End: Original strand, 53933676 - 53934002
Alignment:
| Q |
1 |
tggttgtacataataaaagaatataacaaggacatgtcttaaaaattaaagagtgaatattttgacattaatatgagcatgaattgacgataaggaccaa |
100 |
Q |
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| T |
53933676 |
tggttgtacataataaaagaatataacatggacatgtcttaaaaattaaagagtgaatattttgacatgaatatgagcatgaattgacgataaggaccaa |
53933775 |
T |
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| Q |
101 |
aaacataacaaaattttgtgagaactaaaacatcggattcttgttctaaagattaaaattaaaattcactatatttctagtaacaacaaatttatttatc |
200 |
Q |
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| T |
53933776 |
aaacaaaacaaaattttgcgagaacgaaaacatcggattcttgttctaaagattaaaattaaaattcactatatttctagtaacaacaaatttatttatc |
53933875 |
T |
|
| Q |
201 |
atattttcttttataattcttttaatttatatggtaaactgaatagagtatgggaaataactaaaaatagagggacgactgacattccaaaaatgttgct |
300 |
Q |
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| T |
53933876 |
atattttcttttataattctattaatttatatggtaaactgaatagagtatgggaaataactaaaaatagagggactactgacattccaaaaatgttgct |
53933975 |
T |
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| Q |
301 |
gtttcagtgtagtttgaaataaaaaag |
327 |
Q |
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||||||||||||||||||||||||||| |
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| T |
53933976 |
gtttcagtgtagtttgaaataaaaaag |
53934002 |
T |
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