View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15429_low_6 (Length: 400)
Name: NF15429_low_6
Description: NF15429
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15429_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 270; Significance: 1e-151; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 15 - 391
Target Start/End: Original strand, 24879209 - 24879563
Alignment:
| Q |
15 |
aatatctattataaaaaggaccaaaacgaatacctcacttggttctttgagtttccacattttccttaagttcattattatcatgtctattggatgcatg |
114 |
Q |
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| T |
24879209 |
aatatctcttataaaaaggaccaaagcgaatacctcacttggttctttgagtttccacattttccttaagttcattattatcatgtttattggatgca-- |
24879306 |
T |
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| Q |
115 |
gatatcttcctcgatgtttatggatatcttcctcgatgtttctaaagtgttcaataataattcattccaatgtgttactacatttttaaatgttagttgt |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24879307 |
--------------------tggatatcttcctcgatgtttctaaagtgttcaataataattcattccaatgtgttactacatttttaaatgttagttgt |
24879386 |
T |
|
| Q |
215 |
gtctggaaaacctttatttccaatatgctctcccctttctttggtaaattataggctaaactactttaatttgattaattggtagtaatatttcaaaatc |
314 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| |
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| T |
24879387 |
gtctggaaaacctttatttccaatatgctctcccctttctttggtaaattatagggtaaactactttaatttgattaattggtagtgatatttcaaaatt |
24879486 |
T |
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| Q |
315 |
atttgaaactccaacaatgaaagactatgatatcacctatccgaagttgaagctcctatctcgcataccacctttgc |
391 |
Q |
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||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||| |
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| T |
24879487 |
atttgaaactccaacaatgaaagactatgatgtcacttattcgaagttgaagctcctatctcgcataccacctttgc |
24879563 |
T |
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