View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15429_low_7 (Length: 360)

Name: NF15429_low_7
Description: NF15429
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15429_low_7
NF15429_low_7
[»] chr4 (27 HSPs)
chr4 (1-167)||(23091341-23091508)
chr4 (251-354)||(39590986-39591089)
chr4 (257-354)||(52981118-52981215)
chr4 (251-354)||(96649-96752)
chr4 (251-329)||(39592282-39592360)
chr4 (251-350)||(29686301-29686400)
chr4 (251-351)||(11113787-11113887)
chr4 (251-354)||(15787470-15787573)
chr4 (251-329)||(6616204-6616282)
chr4 (251-329)||(11114973-11115051)
chr4 (251-331)||(1273424-1273504)
chr4 (251-351)||(21104281-21104381)
chr4 (251-351)||(28103457-28103557)
chr4 (255-351)||(31711141-31711237)
chr4 (289-329)||(35787879-35787919)
chr4 (251-330)||(53400230-53400309)
chr4 (251-329)||(47668590-47668668)
chr4 (321-354)||(26121985-26122018)
chr4 (251-331)||(44128325-44128405)
chr4 (251-354)||(38417598-38417701)
chr4 (251-354)||(46795994-46796097)
chr4 (1-59)||(13266229-13266287)
chr4 (102-144)||(24629291-24629333)
chr4 (251-331)||(5688628-5688708)
chr4 (251-351)||(35789561-35789661)
chr4 (289-329)||(38370365-38370405)
chr4 (306-346)||(43895593-43895633)
[»] chr7 (27 HSPs)
chr7 (251-351)||(14107877-14107977)
chr7 (251-351)||(14417834-14417934)
chr7 (297-354)||(40926487-40926544)
chr7 (251-354)||(18670472-18670574)
chr7 (256-348)||(38408248-38408340)
chr7 (251-329)||(14109064-14109140)
chr7 (251-329)||(14419021-14419097)
chr7 (251-327)||(30222691-30222767)
chr7 (306-354)||(44114624-44114672)
chr7 (251-354)||(4858312-4858415)
chr7 (256-331)||(7148049-7148124)
chr7 (251-329)||(13286987-13287065)
chr7 (309-354)||(28326358-28326403)
chr7 (251-323)||(41126284-41126356)
chr7 (251-327)||(41618494-41618570)
chr7 (1-88)||(5406504-5406591)
chr7 (256-351)||(24873568-24873663)
chr7 (256-331)||(43007640-43007715)
chr7 (251-329)||(46458706-46458784)
chr7 (251-352)||(25153703-25153804)
chr7 (289-330)||(43936132-43936173)
chr7 (289-330)||(48754079-48754120)
chr7 (251-331)||(7146825-7146904)
chr7 (318-354)||(18802357-18802393)
chr7 (251-323)||(34558300-34558372)
chr7 (251-327)||(36673831-36673907)
chr7 (306-346)||(43931842-43931882)
[»] scaffold0045 (1 HSPs)
scaffold0045 (260-354)||(75799-75893)
[»] chr3 (31 HSPs)
chr3 (256-354)||(19622887-19622985)
chr3 (254-354)||(7921611-7921711)
chr3 (300-354)||(17345404-17345458)
chr3 (251-327)||(53049032-53049108)
chr3 (291-330)||(7820475-7820514)
chr3 (251-354)||(38639063-38639166)
chr3 (251-354)||(43345364-43345467)
chr3 (251-344)||(11220636-11220729)
chr3 (251-324)||(54653964-54654037)
chr3 (251-323)||(48035323-48035395)
chr3 (251-327)||(52293518-52293594)
chr3 (251-323)||(53047942-53048014)
chr3 (251-354)||(32980420-32980523)
chr3 (256-327)||(39287520-39287591)
chr3 (297-351)||(19252973-19253027)
chr3 (308-354)||(31281074-31281120)
chr3 (251-329)||(39133062-39133140)
chr3 (308-354)||(55425570-55425616)
chr3 (70-144)||(14820365-14820439)
chr3 (251-300)||(19579316-19579365)
chr3 (289-354)||(25585801-25585866)
chr3 (256-325)||(36626781-36626850)
chr3 (251-300)||(39288461-39288510)
chr3 (256-329)||(47765488-47765561)
chr3 (251-300)||(53342761-53342810)
chr3 (256-329)||(53808368-53808441)
chr3 (306-354)||(8372584-8372632)
chr3 (289-329)||(23559902-23559942)
chr3 (297-329)||(26798899-26798931)
chr3 (251-327)||(32973184-32973260)
chr3 (251-331)||(42632751-42632831)
[»] chr8 (16 HSPs)
chr8 (251-354)||(10053712-10053815)
chr8 (289-354)||(34616217-34616282)
chr8 (306-354)||(16362519-16362567)
chr8 (306-354)||(44607284-44607332)
chr8 (251-351)||(45195775-45195875)
chr8 (256-354)||(37274937-37275035)
chr8 (291-329)||(39546670-39546708)
chr8 (306-351)||(44102049-44102094)
chr8 (289-330)||(45385786-45385827)
chr8 (289-329)||(117131-117171)
chr8 (297-329)||(8395086-8395118)
chr8 (297-329)||(12281773-12281805)
chr8 (307-339)||(24068431-24068463)
chr8 (289-329)||(36756147-36756187)
chr8 (306-354)||(39545030-39545078)
chr8 (306-354)||(40251324-40251372)
[»] chr6 (9 HSPs)
chr6 (251-346)||(31740248-31740343)
chr6 (297-354)||(33807780-33807837)
chr6 (256-329)||(18139480-18139553)
chr6 (1-59)||(12194471-12194529)
chr6 (251-329)||(31738408-31738486)
chr6 (251-327)||(2138632-2138708)
chr6 (251-331)||(8412307-8412387)
chr6 (306-354)||(18773754-18773802)
chr6 (289-329)||(33802010-33802050)
[»] chr5 (13 HSPs)
chr5 (251-354)||(15857586-15857689)
chr5 (251-351)||(12936073-12936173)
chr5 (251-351)||(12950231-12950331)
chr5 (297-351)||(5384317-5384371)
chr5 (306-354)||(1273189-1273237)
chr5 (251-351)||(19524028-19524127)
chr5 (306-354)||(41905275-41905323)
chr5 (309-352)||(21389113-21389156)
chr5 (251-329)||(42510159-42510237)
chr5 (309-354)||(8188168-8188213)
chr5 (251-327)||(4566996-4567072)
chr5 (251-323)||(15509240-15509312)
chr5 (251-327)||(15510258-15510334)
[»] chr2 (16 HSPs)
chr2 (251-354)||(4701455-4701558)
chr2 (271-354)||(36422689-36422772)
chr2 (295-354)||(21012048-21012107)
chr2 (256-327)||(41312550-41312621)
chr2 (256-329)||(23177724-23177797)
chr2 (256-329)||(23588981-23589054)
chr2 (251-351)||(35801015-35801116)
chr2 (251-327)||(2305585-2305661)
chr2 (251-327)||(2306656-2306732)
chr2 (306-354)||(4830643-4830691)
chr2 (306-345)||(26206024-26206063)
chr2 (251-329)||(37869033-37869111)
chr2 (289-354)||(40174733-40174797)
chr2 (251-331)||(15650486-15650566)
chr2 (289-329)||(32614468-32614508)
chr2 (251-327)||(33836814-33836890)
[»] chr1 (25 HSPs)
chr1 (256-354)||(52741538-52741636)
chr1 (251-329)||(52742969-52743047)
chr1 (251-354)||(36511299-36511402)
chr1 (256-329)||(13930668-13930741)
chr1 (251-327)||(2237973-2238049)
chr1 (311-354)||(9417065-9417108)
chr1 (256-329)||(14071196-14071269)
chr1 (309-354)||(33941420-33941465)
chr1 (297-354)||(47560230-47560286)
chr1 (251-331)||(16218469-16218549)
chr1 (307-354)||(28999940-28999987)
chr1 (251-330)||(42248297-42248376)
chr1 (308-351)||(51217720-51217763)
chr1 (251-329)||(26056140-26056218)
chr1 (308-354)||(34654308-34654354)
chr1 (102-144)||(38341149-38341191)
chr1 (251-324)||(3979311-3979384)
chr1 (251-323)||(2236858-2236930)
chr1 (251-351)||(13929340-13929440)
chr1 (251-331)||(25786013-25786093)
chr1 (306-354)||(33793879-33793927)
chr1 (251-323)||(35683100-35683172)
chr1 (251-327)||(35684198-35684273)
chr1 (251-331)||(47411029-47411109)
chr1 (251-327)||(48935105-48935181)
[»] scaffold0025 (1 HSPs)
scaffold0025 (309-354)||(54694-54739)
[»] scaffold0024 (1 HSPs)
scaffold0024 (251-354)||(72954-73057)
[»] scaffold0084 (1 HSPs)
scaffold0084 (306-346)||(11806-11846)
[»] scaffold0177 (1 HSPs)
scaffold0177 (251-327)||(1800-1876)
[»] scaffold0046 (1 HSPs)
scaffold0046 (306-346)||(24791-24831)


Alignment Details
Target: chr4 (Bit Score: 95; Significance: 2e-46; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 23091508 - 23091341
Alignment:
Q  1 agttaagcatgcttgatttgtagcaattttaggatggatgacattttgggaagttttcccaaacaacaggcaagtgaggataaaacacgctnnnnnnnct 100  Q
    |||||||||||||||| ||||||||||||| |||||| ||| |||||||||||||||||| || ||| |||||||||||||||||||||||       ||    
T  23091508 agttaagcatgcttgacttgtagcaattttgggatgggtgatattttgggaagttttcccgaaaaacgggcaagtgaggataaaacacgctaaaaaaact 23091409  T
Q  101 agtgttagtttat-ggggtcagttggcaaccctgaaagcagtctgatatgtgacgagattattgttgg 167  Q
    ||||||||||||| ||||||||| |||||||||||||||||| || ||||||| ||||||||||||||    
T  23091408 agtgttagtttatgggggtcagtcggcaaccctgaaagcagtttggtatgtgatgagattattgttgg 23091341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 251 - 354
Target Start/End: Original strand, 39590986 - 39591089
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttttttgatgtctaatatttttaata 350  Q
    |||| |||||||||||| ||||||| |||||| ||||| | | |||||||||| ||||| |||||| | ||||||||||| |||||||||||||||||||    
T  39590986 tcccctaactataaagtgtctcaaactggtcccttatgccatctgtcgtttactgttttagtcctcgcagttagtttttttatgtctaatatttttaata 39591085  T
Q  351 tgat 354  Q
    ||||    
T  39591086 tgat 39591089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 257 - 354
Target Start/End: Complemental strand, 52981215 - 52981118
Alignment:
Q  257 aactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttttttgatgtctaatatttttaatatgat 354  Q
    |||||| |||| | ||||| |||||| ||||||||| ||| |||||| |||||||||||| | ||||||||||| |||||||||||||||||||||||    
T  52981215 aactatcaagtgtttcaaactggtcccttatgtcttctgttgtttactgttttggtcctcgcagttagtttttttatgtctaatatttttaatatgat 52981118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 251 - 354
Target Start/End: Complemental strand, 96752 - 96649
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttttttgatgtctaatatttttaata 350  Q
    |||| |||||||||||| ||| ||| |||||| ||||||||| |||||||     ||||||||||| | |||||||||||||||||||||||||||||||    
T  96752 tcccctaactataaagtgtcttaaattggtcccttatgtcttttgtcgttatatattttggtcctcgcagttagttttttgatgtctaatatttttaata 96653  T
Q  351 tgat 354  Q
    ||||    
T  96652 tgat 96649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 251 - 329
Target Start/End: Complemental strand, 39592360 - 39592282
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttttt 329  Q
    |||| |||||||||||| ||||||| |||||||||||||||| |||||||||| |||||||| |||||||||| |||||    
T  39592360 tcccctaactataaagtgtctcaaattggtccattatgtcttctgtcgtttactgttttggttctctccgttaattttt 39592282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 251 - 350
Target Start/End: Original strand, 29686301 - 29686400
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttttttgatgtctaatatttttaata 350  Q
    ||||||||||||||| | ||||||| |||||| |||||||||||||||||  |  |||||||||||||||||| |||||| |  | ||||||||||||||    
T  29686301 tcccttaactataaattgtctcaaattggtcccttatgtcttatgtcgttacctcttttggtcctctccgttaatttttttaattataatatttttaata 29686400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 251 - 351
Target Start/End: Original strand, 11113787 - 11113887
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttttttgatgtctaatatttttaata 350  Q
    ||||||||||||||||| ||||||  |||||   ||  |||| || |||||||| |||||||| | ||||||||||||| ||||||||||||||||||||    
T  11113787 tcccttaactataaagtgtctcaatttggtctcataactcttctgccgtttaccattttggtcatttccgttagtttttagatgtctaatatttttaata 11113886  T
Q  351 t 351  Q
    |    
T  11113887 t 11113887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 251 - 354
Target Start/End: Complemental strand, 15787573 - 15787470
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttttttgatgtctaatatttttaata 350  Q
    |||| |||||||||||| ||||||  ||||||  ||  | || || |||||||| |||||||||||||| ||| |||||| |||||||||||||||||||    
T  15787573 tcccctaactataaagtgtctcaatttggtcccataacttttttgccgtttaccattttggtcctctccattaattttttaatgtctaatatttttaata 15787474  T
Q  351 tgat 354  Q
    ||||    
T  15787473 tgat 15787470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 251 - 329
Target Start/End: Complemental strand, 6616282 - 6616204
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttttt 329  Q
    |||| |||||||||||| ||||||| |||||| |||| | || |||||||||  ||||||||||||||| |||||||||    
T  6616282 tcccctaactataaagtgtctcaaattggtcccttatatattctgtcgtttattgttttggtcctctcctttagttttt 6616204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 251 - 329
Target Start/End: Complemental strand, 11115051 - 11114973
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttttt 329  Q
    |||| |||||||||||||||||||  ||||||  ||  |||| ||||||||||| |||||| |||||||||||||||||    
T  11115051 tcccctaactataaagtatctcaatttggtcccataactcttctgtcgtttaccattttggacctctccgttagttttt 11114973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 331
Target Start/End: Complemental strand, 1273504 - 1273424
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttttttg 331  Q
    |||| |||||||||||| ||||||  ||||||  || |||||||||||||| |  |||||||||||||||||||| |||||    
T  1273504 tcccctaactataaagtgtctcaatttggtcccataagtcttatgtcgtttgctattttggtcctctccgttagtattttg 1273424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 351
Target Start/End: Complemental strand, 21104381 - 21104281
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttttttgatgtctaatatttttaata 350  Q
    |||| |||||||||||| ||||||  |||||   |||||||| ||||||||||| |||||||||| |||||| | ||||| |||| || ||||||| |||    
T  21104381 tcccctaactataaagtgtctcaatttggtctcatatgtcttctgtcgtttaccattttggtcctttccgtttgctttttaatgtttactatttttgata 21104282  T
Q  351 t 351  Q
    |    
T  21104281 t 21104281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 351
Target Start/End: Complemental strand, 28103557 - 28103457
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttttttgatgtctaatatttttaata 350  Q
    ||||||||||||||||| ||||||  ||||||  || | ||| || |||||||| |||||||||| |||||| ||||||| |||| || ||||||| |||    
T  28103557 tcccttaactataaagtgtctcaatttggtcccataagacttctgccgtttaccattttggtcctttccgtttgttttttaatgtttactatttttgata 28103458  T
Q  351 t 351  Q
    |    
T  28103457 t 28103457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 255 - 351
Target Start/End: Original strand, 31711141 - 31711237
Alignment:
Q  255 ttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttttttgatgtctaatatttttaatat 351  Q
    ||||||||||||| ||||||  |||||   || ||||||||||||||||| ||||| |||| |||||| ||||||| |||| || ||||||| ||||    
T  31711141 ttaactataaagtgtctcaatttggtctcataagtcttatgtcgtttaccattttgatcctttccgtttgttttttaatgtttactatttttgatat 31711237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 289 - 329
Target Start/End: Original strand, 35787879 - 35787919
Alignment:
Q  289 tcttatgtcgtttaccgttttggtcctctccgttagttttt 329  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  35787879 tcttctgtcgtttaccgttttggtcctctccgttagttttt 35787919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 330
Target Start/End: Original strand, 53400230 - 53400309
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagtttttt 330  Q
    |||| |||||||||||| ||||||  ||||||  ||  |||||||||||||||| |||| |||||||||||||| |||||    
T  53400230 tcccataactataaagtgtctcaatttggtcctataaatcttatgtcgtttaccattttagtcctctccgttagattttt 53400309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 329
Target Start/End: Complemental strand, 47668668 - 47668590
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttttt 329  Q
    |||| |||||||||||| ||||||| |||||| |||| || | || ||||||  |||||||||||||| ||||||||||    
T  47668668 tcccctaactataaagtgtctcaaattggtcccttatatcatctgccgtttattgttttggtcctctctgttagttttt 47668590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 321 - 354
Target Start/End: Original strand, 26121985 - 26122018
Alignment:
Q  321 ttagttttttgatgtctaatatttttaatatgat 354  Q
    ||||||||||||||||||||||||||||||||||    
T  26121985 ttagttttttgatgtctaatatttttaatatgat 26122018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 331
Target Start/End: Complemental strand, 44128405 - 44128325
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttttttg 331  Q
    |||| |||||||||||| ||||||  | |||| |||  ||||||| |||||||  |||||||||||||||||||| |||||    
T  44128405 tcccctaactataaagtgtctcaatttagtcctttaaatcttatgccgtttactattttggtcctctccgttagtattttg 44128325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 251 - 354
Target Start/End: Original strand, 38417598 - 38417701
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttttttgatgtctaatatttttaata 350  Q
    |||||||||||| |||| | ||||  ||||||  ||  |||||||||||||||  ||| |||||||||||||||| |||| |||| ||   |||||||||    
T  38417598 tcccttaactattaagtgtgtcaatttggtcccataaatcttatgtcgtttactatttcggtcctctccgttagtattttaatgtttagattttttaata 38417697  T
Q  351 tgat 354  Q
    ||||    
T  38417698 tgat 38417701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 251 - 354
Target Start/End: Complemental strand, 46796097 - 46795994
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttttttgatgtctaatatttttaata 350  Q
    |||| |||||||||||| ||||||  ||||||  || |||||    |||||||  || |||||||||||||||||||||| ||||||||  ||||| |||    
T  46796097 tcccctaactataaagtgtctcaatttggtcccataagtcttcctccgtttactattgtggtcctctccgttagttttttaatgtctaaattttttgata 46795998  T
Q  351 tgat 354  Q
    ||||    
T  46795997 tgat 46795994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 13266229 - 13266287
Alignment:
Q  1 agttaagcatgcttgatttgtagcaattttaggatggatgacattttgggaagttttcc 59  Q
    |||||||| ||||||| ||  || ||||||||||||| |||| ||||||||||||||||    
T  13266229 agttaagcgtgcttgactttgagaaattttaggatgggtgaccttttgggaagttttcc 13266287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 144
Target Start/End: Complemental strand, 24629333 - 24629291
Alignment:
Q  102 gtgttagtttatggggtcagttggcaaccctgaaagcagtctg 144  Q
    |||||||||| |||||||||| ||||| |||||||||||||||    
T  24629333 gtgttagtttgtggggtcagtcggcaatcctgaaagcagtctg 24629291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 331
Target Start/End: Complemental strand, 5688708 - 5688628
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttttttg 331  Q
    |||| |||||||||||| ||||||  |||| |  ||  |||||||||||||||  |||||||| ||||||||||| |||||    
T  5688708 tcccctaactataaagtgtctcaatttggttccataaatcttatgtcgtttactattttggtcatctccgttagtattttg 5688628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 351
Target Start/End: Complemental strand, 35789661 - 35789561
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttttttgatgtctaatatttttaata 350  Q
    |||| |||||||||||| | ||||| || ||| |||| | || |||||||  |  |||||||| || | |||| |||||| |||||||||||||||||||    
T  35789661 tcccgtaactataaagtgtttcaaactgatcccttatattttttgtcgttatctattttggtcatcacagttaatttttttatgtctaatatttttaata 35789562  T
Q  351 t 351  Q
    |    
T  35789561 t 35789561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 329
Target Start/End: Original strand, 38370365 - 38370405
Alignment:
Q  289 tcttatgtcgtttaccgttttggtcctctccgttagttttt 329  Q
    |||| ||||||||||| |||||||| |||||||||||||||    
T  38370365 tcttctgtcgtttaccattttggtcatctccgttagttttt 38370405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 346
Target Start/End: Complemental strand, 43895633 - 43895593
Alignment:
Q  306 ttttggtcctctccgttagttttttgatgtctaatattttt 346  Q
    |||||||| ||||||||| |||||| |||||||||||||||    
T  43895633 ttttggtcatctccgttaattttttaatgtctaatattttt 43895593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 81; Significance: 5e-38; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 251 - 351
Target Start/End: Original strand, 14107877 - 14107977
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttttttgatgtctaatatttttaata 350  Q
    ||||||||||||||||| |||||||||||||| |||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  14107877 tcccttaactataaagtgtctcaaagtggtcccttatatcttctgtcgttcaccgttttggtcctctccgttagttttttgatgtctaatatttttaata 14107976  T
Q  351 t 351  Q
    |    
T  14107977 t 14107977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 251 - 351
Target Start/End: Original strand, 14417834 - 14417934
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttttttgatgtctaatatttttaata 350  Q
    ||||||||||||||||| |||||||||||||| |||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  14417834 tcccttaactataaagtgtctcaaagtggtcccttatatcttctgtcgttcaccgttttggtcctctccgttagttttttgatgtctaatatttttaata 14417933  T
Q  351 t 351  Q
    |    
T  14417934 t 14417934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 297 - 354
Target Start/End: Complemental strand, 40926544 - 40926487
Alignment:
Q  297 cgtttaccgttttggtcctctccgttagttttttgatgtctaatatttttaatatgat 354  Q
    |||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||    
T  40926544 cgtttaccgttttggtcctctccgttaactttttaatgtctaatatttttaatatgat 40926487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 251 - 354
Target Start/End: Complemental strand, 18670574 - 18670472
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttttttgatgtctaatatttttaata 350  Q
    |||||||||| |||| | ||||||| |||||| |||||| |||| ||||| | |  |||||||||||| ||||||||||| |||| ||||||||||||||    
T  18670574 tcccttaactttaaaatgtctcaaattggtcccttatgtattatatcgtt-atctatttggtcctctctgttagttttttaatgtataatatttttaata 18670476  T
Q  351 tgat 354  Q
    ||||    
T  18670475 tgat 18670472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 256 - 348
Target Start/End: Complemental strand, 38408340 - 38408248
Alignment:
Q  256 taactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttttttgatgtctaatatttttaa 348  Q
    |||||||||||| ||||||| |||||| ||||||||| || ||||  |  |||||||||||   |||||||||| ||||||||||||||||||    
T  38408340 taactataaagtgtctcaaattggtcccttatgtcttctgccgttatctattttggtcctcaaagttagtttttggatgtctaatatttttaa 38408248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 251 - 329
Target Start/End: Complemental strand, 14109140 - 14109064
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttttt 329  Q
    ||||||||||||||| | ||||||| ||||||   ||||||| || ||||||||||||| |||||||||||||||||||    
T  14109140 tcccttaactataaaatgtctcaaactggtccc--atgtcttttgccgtttaccgttttagtcctctccgttagttttt 14109064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 251 - 329
Target Start/End: Complemental strand, 14419097 - 14419021
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttttt 329  Q
    ||||||||||||||| | ||||||| ||||||   ||||||| || ||||||||||||| |||||||||||||||||||    
T  14419097 tcccttaactataaaatgtctcaaactggtccc--atgtcttttgccgtttaccgttttagtcctctccgttagttttt 14419021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 327
Target Start/End: Original strand, 30222691 - 30222767
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttt 327  Q
    |||| ||| |||||||||||||||  |||||| ||||||||| |||||||  |  ||||||||||||||||||||||    
T  30222691 tcccctaattataaagtatctcaatttggtcccttatgtcttctgtcgttacctcttttggtcctctccgttagttt 30222767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 306 - 354
Target Start/End: Complemental strand, 44114672 - 44114624
Alignment:
Q  306 ttttggtcctctccgttagttttttgatgtctaatatttttaatatgat 354  Q
    ||||||||||||||||||||||||| |||| | ||||||||||||||||    
T  44114672 ttttggtcctctccgttagttttttaatgtatcatatttttaatatgat 44114624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 354
Target Start/End: Complemental strand, 4858415 - 4858312
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttttttgatgtctaatatttttaata 350  Q
    |||| |||||||||| | ||||||  ||||||  ||  |||| ||| ||||||  ||||  |||||||  ||||||||||||||||||||||||||||||    
T  4858415 tcccctaactataaaatgtctcaatttggtcccataaatcttctgttgtttactattttaatcctctctattagttttttgatgtctaatatttttaata 4858316  T
Q  351 tgat 354  Q
    ||||    
T  4858315 tgat 4858312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 256 - 331
Target Start/End: Complemental strand, 7148124 - 7148049
Alignment:
Q  256 taactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttttttg 331  Q
    |||||||||||| | ||||  |||||| |||  ||||||||||||||| |||||||| |||||||||||| |||||    
T  7148124 taactataaagtgtttcaatttggtcccttaaatcttatgtcgtttactgttttggttctctccgttagtattttg 7148049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 329
Target Start/End: Complemental strand, 13287065 - 13286987
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttttt 329  Q
    |||||||||||| |||| | ||||  |||||| ||||||||||||  ||||||  |||||||||||| |||||||||||    
T  13287065 tcccttaactattaagtgtttcaatttggtcccttatgtcttatgctgtttactattttggtcctcttcgttagttttt 13286987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 309 - 354
Target Start/End: Complemental strand, 28326403 - 28326358
Alignment:
Q  309 tggtcctctccgttagttttttgatgtctaatatttttaatatgat 354  Q
    |||||||||||||||||||||| ||||||||  |||||||||||||    
T  28326403 tggtcctctccgttagttttttaatgtctaaattttttaatatgat 28326358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 323
Target Start/End: Original strand, 41126284 - 41126356
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgtta 323  Q
    |||| |||||||||||| ||||||  |||||| ||||||||| |||||||  |  ||||||||||||||||||    
T  41126284 tcccctaactataaagtgtctcaatttggtcccttatgtcttctgtcgttacctcttttggtcctctccgtta 41126356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 327
Target Start/End: Complemental strand, 41618570 - 41618494
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttt 327  Q
    |||| ||| |||||||| ||| ||  |||||||||||||||| |||||||  |  ||||||||||||||||||||||    
T  41618570 tcccctaattataaagtgtctaaatttggtccattatgtcttctgtcgttacctcttttggtcctctccgttagttt 41618494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 5406591 - 5406504
Alignment:
Q  1 agttaagcatgcttgatttgtagcaattttaggatggatgacattttgggaagttttcccaaacaacaggcaagtgaggataaaacac 88  Q
    |||||||| ||||||| ||  ||||||||| ||||||||||| || ||| ||||||||| ||| |||  || |||||||| |||||||    
T  5406591 agttaagcgtgcttgactttgagcaattttgggatggatgactttctggaaagttttccgaaaaaacgtgcgagtgaggacaaaacac 5406504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 256 - 351
Target Start/End: Complemental strand, 24873663 - 24873568
Alignment:
Q  256 taactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttttttgatgtctaatatttttaatat 351  Q
    |||||||||||| ||||||  ||||||  || ||||| || |||||||| |||||||| | |||||| ||||||| |||| || ||||||| ||||    
T  24873663 taactataaagtgtctcaatttggtcccataagtcttctgccgtttaccattttggtcatttccgtttgttttttaatgtttactatttttgatat 24873568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 256 - 331
Target Start/End: Complemental strand, 43007715 - 43007640
Alignment:
Q  256 taactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttttttg 331  Q
    |||||||||||| ||||||  ||||||  || ||||||||||||||||  |||| || |||||||||||| |||||    
T  43007715 taactataaagtgtctcaatttggtcccataagtcttatgtcgtttactattttagttctctccgttagtattttg 43007640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 329
Target Start/End: Complemental strand, 46458784 - 46458706
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttttt 329  Q
    ||||||||||||||||| ||||||  ||||||  ||  |||| |  |||||||| ||||||||||||||||| ||||||    
T  46458784 tcccttaactataaagtgtctcaatttggtcccataaatcttcttccgtttaccattttggtcctctccgtttgttttt 46458706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 352
Target Start/End: Original strand, 25153703 - 25153804
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttttttgatgtctaatatttttaata 350  Q
    |||| |||||||||||| ||||||  ||||||  ||  |||| |  ||||||||||||||||| | |||||  ||||||| || |||||||||||| |||    
T  25153703 tcccctaactataaagtgtctcaatttggtcccataaatcttcttccgtttaccgttttggtcttgtccgtgtgttttttaatatctaatatttttgata 25153802  T
Q  351 tg 352  Q
    ||    
T  25153803 tg 25153804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 43936173 - 43936132
Alignment:
Q  289 tcttatgtcgtttaccgttttggtcctctccgttagtttttt 330  Q
    |||| ||||||||||  |||||||||||||||||||||||||    
T  43936173 tcttctgtcgtttactattttggtcctctccgttagtttttt 43936132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 330
Target Start/End: Original strand, 48754079 - 48754120
Alignment:
Q  289 tcttatgtcgtttaccgttttggtcctctccgttagtttttt 330  Q
    |||||||||||||||| |||| |||||||||||||| |||||    
T  48754079 tcttatgtcgtttaccattttagtcctctccgttagattttt 48754120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 331
Target Start/End: Original strand, 7146825 - 7146904
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttttttg 331  Q
    |||| |||||||||||| | ||||  |||||| |||  ||||||||| ||||| ||||||||||||||| ||||| |||||    
T  7146825 tcccctaactataaagtgtttcaatttggtcc-ttaaatcttatgtcatttactgttttggtcctctccattagtattttg 7146904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 354
Target Start/End: Complemental strand, 18802393 - 18802357
Alignment:
Q  318 ccgttagttttttgatgtctaatatttttaatatgat 354  Q
    |||| |||||||||||||||| |||||||||||||||    
T  18802393 ccgtcagttttttgatgtctagtatttttaatatgat 18802357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 323
Target Start/End: Complemental strand, 34558372 - 34558300
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgtta 323  Q
    |||| |||||||||||||||||||  |||||| ||||||||| || ||||  |  |||||||||| |||||||    
T  34558372 tcccctaactataaagtatctcaatttggtcccttatgtcttttgccgttacctcttttggtcctatccgtta 34558300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 327
Target Start/End: Complemental strand, 36673907 - 36673831
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttt 327  Q
    |||| |||||||||| | ||||||  |||||| ||||||||| |||||||  |  ||||||||||||| ||||||||    
T  36673907 tcccctaactataaaatgtctcaatttggtcccttatgtcttctgtcgttacctcttttggtcctctcagttagttt 36673831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 346
Target Start/End: Complemental strand, 43931882 - 43931842
Alignment:
Q  306 ttttggtcctctccgttagttttttgatgtctaatattttt 346  Q
    ||||||||| ||||||||||||||| |||||||| ||||||    
T  43931882 ttttggtcccctccgttagttttttaatgtctaacattttt 43931842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 260 - 354
Target Start/End: Original strand, 75799 - 75893
Alignment:
Q  260 tataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttttttgatgtctaatatttttaatatgat 354  Q
    |||||||| ||||||| || ||||||||||||| |||||||  |  ||||||||||| | |||||||||||||||||||||||||||||||||||    
T  75799 tataaagtgtctcaaactgatccattatgtcttttgtcgttatctattttggtcctcgcagttagttttttgatgtctaatatttttaatatgat 75893  T

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Target: chr3 (Bit Score: 51; Significance: 4e-20; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 256 - 354
Target Start/End: Complemental strand, 19622985 - 19622887
Alignment:
Q  256 taactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttttttgatgtctaatatttttaatatgat 354  Q
    |||||||||||| ||||||| |||||| ||||||||| |||||||  |  |||||||| || | |||| ||||||||||||||||||||||||||||||    
T  19622985 taactataaagtgtctcaaactggtcccttatgtcttctgtcgttatctattttggtcatcgcagttaattttttgatgtctaatatttttaatatgat 19622887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 254 - 354
Target Start/End: Complemental strand, 7921711 - 7921611
Alignment:
Q  254 cttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttttttgatgtctaatatttttaatatga 353  Q
    ||||||||| |||| ||||||| |||||| |||||| || |||||||  |  ||||| ||||||||||||||||||| ||||||||||||||| ||||||    
T  7921711 cttaactattaagtgtctcaaattggtcccttatgtattgtgtcgttacctattttgatcctctccgttagttttttaatgtctaatatttttgatatga 7921612  T
Q  354 t 354  Q
    |    
T  7921611 t 7921611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 300 - 354
Target Start/End: Original strand, 17345404 - 17345458
Alignment:
Q  300 ttaccgttttggtcctctccgttagttttttgatgtctaatatttttaatatgat 354  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  17345404 ttacctttttggtcctctccgttagttttttaatgtctaatatttttaatatgat 17345458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 327
Target Start/End: Complemental strand, 53049108 - 53049032
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttt 327  Q
    |||| |||||||||||| ||||||  |||||| ||||||||| |||||||  |  ||||||||||||||||||||||    
T  53049108 tcccctaactataaagtgtctcaatttggtcccttatgtcttctgtcgttacctcttttggtcctctccgttagttt 53049032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 291 - 330
Target Start/End: Original strand, 7820475 - 7820514
Alignment:
Q  291 ttatgtcgtttaccgttttggtcctctccgttagtttttt 330  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  7820475 ttatgtcgtttactgttttggtcctctccgttagtttttt 7820514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 354
Target Start/End: Original strand, 38639063 - 38639166
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttttttgatgtctaatatttttaata 350  Q
    ||||||||||||||||| | || |  |||||  |||||||||  ||||||  |  ||||||||||| | |||||||||||||| |||||||||||||| |    
T  38639063 tcccttaactataaagtgtttcgatttggtctcttatgtcttccgtcgttctctattttggtcctcgcagttagttttttgatatctaatatttttaaaa 38639162  T
Q  351 tgat 354  Q
    ||||    
T  38639163 tgat 38639166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 354
Target Start/End: Original strand, 43345364 - 43345467
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttttttgatgtctaatatttttaata 350  Q
    ||||||||||||||| | | ||||  ||||||  ||  |||| | ||||||||| |||||||  |||||||||||||||| |||| |||||||||| |||    
T  43345364 tcccttaactataaaatgtttcaatttggtcccataaatcttctctcgtttaccattttggttttctccgttagttttttaatgtttaatatttttgata 43345463  T
Q  351 tgat 354  Q
    ||||    
T  43345464 tgat 43345467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 251 - 344
Target Start/End: Complemental strand, 11220729 - 11220636
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttttttgatgtctaatattt 344  Q
    |||| |||||||||||| ||||||  ||||||  ||  |||| ||||||||||  ||||||||| ||||||| ||||||| ||||| |||||||    
T  11220729 tcccctaactataaagtgtctcaatttggtcctataaatcttctgtcgtttactattttggtcccctccgtttgttttttaatgtcaaatattt 11220636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 251 - 324
Target Start/End: Complemental strand, 54654037 - 54653964
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttag 324  Q
    ||||||||||||||||| ||||||  ||||||  ||  |||| ||||||||||  |||||||||||||||||||    
T  54654037 tcccttaactataaagtgtctcaatttggtcccataattcttctgtcgtttactattttggtcctctccgttag 54653964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 323
Target Start/End: Complemental strand, 48035395 - 48035323
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgtta 323  Q
    |||| |||||||||||| ||||||  |||||| |||||||||||| ||||  |  ||||||||||||||||||    
T  48035395 tcccctaactataaagtgtctcaatttggtcccttatgtcttatgccgttacctcttttggtcctctccgtta 48035323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 327
Target Start/End: Complemental strand, 52293594 - 52293518
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttt 327  Q
    |||| |||||||||||| ||||||  |||||| ||||||||| | |||||  |  ||||||||||||||||||||||    
T  52293594 tcccctaactataaagtgtctcaatttggtcctttatgtcttctatcgttacctcttttggtcctctccgttagttt 52293518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 323
Target Start/End: Original strand, 53047942 - 53048014
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgtta 323  Q
    |||| |||||||||||| ||||||  |||||| ||||||||| |||||||  |  ||||||||||||||||||    
T  53047942 tcccctaactataaagtgtctcaatttggtcccttatgtcttctgtcgttacctcttttggtcctctccgtta 53048014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 251 - 354
Target Start/End: Complemental strand, 32980523 - 32980420
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttttttgatgtctaatatttttaata 350  Q
    |||| |||||| ||||| ||||||  ||||||  ||  |||| || |||||||  |||||||| |||||||||||||||| || ||||| |||||| |||    
T  32980523 tcccctaactacaaagtgtctcaatttggtcctataaatcttctgccgtttactattttggtcatctccgttagttttttaatttctaacatttttgata 32980424  T
Q  351 tgat 354  Q
    ||||    
T  32980423 tgat 32980420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 256 - 327
Target Start/End: Original strand, 39287520 - 39287591
Alignment:
Q  256 taactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttt 327  Q
    |||||||||||| ||||||  |||||| |||||| || |||||||  |  ||||||||||||||||||||||    
T  39287520 taactataaagtgtctcaatttggtcccttatgttttctgtcgttacctcttttggtcctctccgttagttt 39287591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 297 - 351
Target Start/End: Complemental strand, 19253027 - 19252973
Alignment:
Q  297 cgtttaccgttttggtcctctccgttagttttttgatgtctaatatttttaatat 351  Q
    |||||||| |||||||||| ||||||  |||||| ||||||||||||||| ||||    
T  19253027 cgtttaccattttggtcctgtccgtttattttttaatgtctaatattttttatat 19252973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 354
Target Start/End: Original strand, 31281074 - 31281120
Alignment:
Q  308 ttggtcctctccgttagttttttgatgtctaatatttttaatatgat 354  Q
    ||||||| ||||||||||||||| ||||||||||| || ||||||||    
T  31281074 ttggtccactccgttagttttttaatgtctaatatcttaaatatgat 31281120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 329
Target Start/End: Original strand, 39133062 - 39133140
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttttt 329  Q
    |||| |||||||||||| ||||||  |||||| ||||||||| | |||||  |  ||||||||||||| ||||||||||    
T  39133062 tcccctaactataaagtgtctcaatttggtcccttatgtcttctctcgttacctcttttggtcctctctgttagttttt 39133140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 354
Target Start/End: Complemental strand, 55425616 - 55425570
Alignment:
Q  308 ttggtcctctccgttagttttttgatgtctaatatttttaatatgat 354  Q
    ||||||| ||||||||||||||| ||||||||||| || ||||||||    
T  55425616 ttggtccactccgttagttttttaatgtctaatatcttaaatatgat 55425570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 144
Target Start/End: Original strand, 14820365 - 14820439
Alignment:
Q  70 gcaagtgaggataaaacacgctnnnnnnnctagtgttagtttatggggtcagttggcaaccctgaaagcagtctg 144  Q
    ||||||||||| ||||||||||       || ||||| |||| |||||||||| ||||| |||||||||||||||    
T  14820365 gcaagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctg 14820439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 300
Target Start/End: Complemental strand, 19579365 - 19579316
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtt 300  Q
    ||||||||||||||||| ||||||  |||||| ||||||||| |||||||    
T  19579365 tcccttaactataaagtgtctcaatttggtcccttatgtcttctgtcgtt 19579316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 354
Target Start/End: Complemental strand, 25585866 - 25585801
Alignment:
Q  289 tcttatgtcgtttaccgttttggtcctctccgttagttttttgatgtctaatatttttaatatgat 354  Q
    |||| ||||||||||  |||| ||| |||||||||||||||| |||||||| |||| | |||||||    
T  25585866 tcttctgtcgtttactattttagtcatctccgttagttttttaatgtctaacatttctgatatgat 25585801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 325
Target Start/End: Original strand, 36626781 - 36626850
Alignment:
Q  256 taactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagt 325  Q
    ||||||| |||| | ||||  |||||| |||  ||||||||||||||| ||||||||||||| |||||||    
T  36626781 taactatgaagtgtttcaatttggtcccttaaatcttatgtcgtttactgttttggtcctcttcgttagt 36626850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 300
Target Start/End: Complemental strand, 39288510 - 39288461
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtt 300  Q
    |||| |||||||||||| ||||||  |||||| |||||||||||||||||    
T  39288510 tcccctaactataaagtgtctcaatttggtcccttatgtcttatgtcgtt 39288461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 329
Target Start/End: Original strand, 47765488 - 47765561
Alignment:
Q  256 taactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttttt 329  Q
    |||||||||||| ||||||| || ||| |||| ||||  || |||||  ||||||||| |||||||||||||||    
T  47765488 taactataaagtgtctcaaattgatcccttatatcttccgttgtttattgttttggtcatctccgttagttttt 47765561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 300
Target Start/End: Original strand, 53342761 - 53342810
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtt 300  Q
    |||| |||||||||||| ||||||  |||||||||||||||| |||||||    
T  53342761 tcccctaactataaagtgtctcaatttggtccattatgtcttttgtcgtt 53342810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 329
Target Start/End: Original strand, 53808368 - 53808441
Alignment:
Q  256 taactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttttt 329  Q
    |||||||||||| ||||||  ||||||  ||  |||||||||||||||  |||||||| ||||| |||||||||    
T  53808368 taactataaagtgtctcaatctggtcccataaatcttatgtcgtttactattttggtcatctccattagttttt 53808441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 354
Target Start/End: Complemental strand, 8372632 - 8372584
Alignment:
Q  306 ttttggtcctctccgttagttttttgatgtctaatatttttaatatgat 354  Q
    ||||||||  ||||||||||||||| |||| |||||||||| |||||||    
T  8372632 ttttggtcacctccgttagttttttaatgtttaatatttttgatatgat 8372584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 329
Target Start/End: Original strand, 23559902 - 23559942
Alignment:
Q  289 tcttatgtcgtttaccgttttggtcctctccgttagttttt 329  Q
    |||| ||||||||||  ||||||||||||||||||||||||    
T  23559902 tcttctgtcgtttactattttggtcctctccgttagttttt 23559942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 329
Target Start/End: Complemental strand, 26798931 - 26798899
Alignment:
Q  297 cgtttaccgttttggtcctctccgttagttttt 329  Q
    |||||||| ||||||||||||||||||||||||    
T  26798931 cgtttaccattttggtcctctccgttagttttt 26798899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 327
Target Start/End: Original strand, 32973184 - 32973260
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttt 327  Q
    |||| |||||||||||| ||||||  |||||| ||||||||| || ||||  |  |||| |||||||||||||||||    
T  32973184 tcccctaactataaagtgtctcaatttggtcccttatgtcttctgccgttacctctttttgtcctctccgttagttt 32973260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 331
Target Start/End: Original strand, 42632751 - 42632831
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttttttg 331  Q
    |||| |||||||||||| ||||||  || |||  ||  |||||||||||||||  |||| ||||||||||||||| |||||    
T  42632751 tcccctaactataaagtgtctcaatttgatcccataaatcttatgtcgtttactattttagtcctctccgttagtattttg 42632831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 2e-18; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 251 - 354
Target Start/End: Complemental strand, 10053815 - 10053712
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttttttgatgtctaatatttttaata 350  Q
    ||||||||||||||||| ||||||  |||||| |||||||||||||||||  |  ||||||| |||||||||| |||||| |  | ||||||||||||||    
T  10053815 tcccttaactataaagtgtctcaagttggtcccttatgtcttatgtcgttacctcttttggttctctccgttaatttttttaattataatatttttaata 10053716  T
Q  351 tgat 354  Q
    ||||    
T  10053715 tgat 10053712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 289 - 354
Target Start/End: Original strand, 34616217 - 34616282
Alignment:
Q  289 tcttatgtcgtttaccgttttggtcctctccgttagttttttgatgtctaatatttttaatatgat 354  Q
    |||| ||||||||||| |||||||| | |||||||||||||| |||| ||||||||||||||||||    
T  34616217 tcttttgtcgtttaccattttggtcatttccgttagttttttaatgtttaatatttttaatatgat 34616282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 306 - 354
Target Start/End: Original strand, 16362519 - 16362567
Alignment:
Q  306 ttttggtcctctccgttagttttttgatgtctaatatttttaatatgat 354  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  16362519 ttttggtcctctccgttagttttttaatgtctaatatttttgatatgat 16362567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 306 - 354
Target Start/End: Complemental strand, 44607332 - 44607284
Alignment:
Q  306 ttttggtcctctccgttagttttttgatgtctaatatttttaatatgat 354  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  44607332 ttttggtcctctcagttagttttttaatgtctaatatttttaatatgat 44607284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 351
Target Start/End: Complemental strand, 45195875 - 45195775
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttttttgatgtctaatatttttaata 350  Q
    |||||||| |||||||| ||||||  | ||||||||| |||| || ||||  |  |||||||| || | |||| ||||||||||| ||||||||||||||    
T  45195875 tcccttaaatataaagtgtctcaatttagtccattatatcttctgccgttatctattttggtcatcacagttaattttttgatgtttaatatttttaata 45195776  T
Q  351 t 351  Q
    |    
T  45195775 t 45195775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 354
Target Start/End: Original strand, 37274937 - 37275035
Alignment:
Q  256 taactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttttttgatgtctaatatttttaatatgat 354  Q
    |||||||||||| ||||||  || |||  ||  |||| || |||||||  ||||||||||||||||||||||||| |||| ||| |||| | |||||||    
T  37274937 taactataaagtgtctcaatttgttcccataaatcttctgccgtttactattttggtcctctccgttagttttttaatgtataacatttctgatatgat 37275035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 291 - 329
Target Start/End: Complemental strand, 39546708 - 39546670
Alignment:
Q  291 ttatgtcgtttaccgttttggtcctctccgttagttttt 329  Q
    ||||| ||||||||||||||||| |||||||||||||||    
T  39546708 ttatgccgtttaccgttttggtcatctccgttagttttt 39546670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 351
Target Start/End: Original strand, 44102049 - 44102094
Alignment:
Q  306 ttttggtcctctccgttagttttttgatgtctaatatttttaatat 351  Q
    ||||||||||||| ||||||||||| ||| ||||||||||| ||||    
T  44102049 ttttggtcctctctgttagttttttaatgactaatattttttatat 44102094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 330
Target Start/End: Complemental strand, 45385827 - 45385786
Alignment:
Q  289 tcttatgtcgtttaccgttttggtcctctccgttagtttttt 330  Q
    |||||||||||||||| |||| |||||||||||||| |||||    
T  45385827 tcttatgtcgtttaccattttagtcctctccgttagattttt 45385786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 329
Target Start/End: Original strand, 117131 - 117171
Alignment:
Q  289 tcttatgtcgtttaccgttttggtcctctccgttagttttt 329  Q
    |||| |||||||||  |||||||||||||||||||||||||    
T  117131 tcttctgtcgtttattgttttggtcctctccgttagttttt 117171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 329
Target Start/End: Original strand, 8395086 - 8395118
Alignment:
Q  297 cgtttaccgttttggtcctctccgttagttttt 329  Q
    |||||||| ||||||||||||||||||||||||    
T  8395086 cgtttaccattttggtcctctccgttagttttt 8395118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 329
Target Start/End: Complemental strand, 12281805 - 12281773
Alignment:
Q  297 cgtttaccgttttggtcctctccgttagttttt 329  Q
    |||||||||||||| ||||||||||||||||||    
T  12281805 cgtttaccgttttgatcctctccgttagttttt 12281773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 307 - 339
Target Start/End: Original strand, 24068431 - 24068463
Alignment:
Q  307 tttggtcctctccgttagttttttgatgtctaa 339  Q
    |||||||||||||||||||||||| ||||||||    
T  24068431 tttggtcctctccgttagttttttaatgtctaa 24068463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 329
Target Start/End: Original strand, 36756147 - 36756187
Alignment:
Q  289 tcttatgtcgtttaccgttttggtcctctccgttagttttt 329  Q
    |||||||||||||||  |||||||| |||||||||||||||    
T  36756147 tcttatgtcgtttactattttggtcatctccgttagttttt 36756187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 354
Target Start/End: Original strand, 39545030 - 39545078
Alignment:
Q  306 ttttggtcctctccgttagttttttgatgtctaatatttttaatatgat 354  Q
    ||||||||||| | |||| ||||||||||| |||||||||||| |||||    
T  39545030 ttttggtcctcacagttaattttttgatgtttaatatttttaaaatgat 39545078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 354
Target Start/End: Complemental strand, 40251372 - 40251324
Alignment:
Q  306 ttttggtcctctccgttagttttttgatgtctaatatttttaatatgat 354  Q
    |||||||||||||  ||| |||||| ||||||||||||||| |||||||    
T  40251372 ttttggtcctctcaattaattttttaatgtctaatatttttgatatgat 40251324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 2e-18; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 251 - 346
Target Start/End: Complemental strand, 31740343 - 31740248
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttttttgatgtctaatattttt 346  Q
    ||||||||||||||||| ||||||  ||||||  ||  ||||||| |||||||| |||||||||| |||||| ||||||| |||||||||||||||    
T  31740343 tcccttaactataaagtgtctcaatttggtcccataaatcttatgccgtttaccattttggtcctatccgtttgttttttaatgtctaatattttt 31740248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 297 - 354
Target Start/End: Original strand, 33807780 - 33807837
Alignment:
Q  297 cgtttaccgttttggtcctctccgttagttttttgatgtctaatatttttaatatgat 354  Q
    ||||||||||||||||||||||||||| |||||| |||||| |||||||| |||||||    
T  33807780 cgtttaccgttttggtcctctccgttaattttttaatgtctgatatttttcatatgat 33807837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 329
Target Start/End: Complemental strand, 18139553 - 18139480
Alignment:
Q  256 taactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttttt 329  Q
    |||||||||||| ||||||| |||||| |||| |||| || ||||||  ||||||||||||||| |||||||||    
T  18139553 taactataaagtgtctcaaattggtcccttatatcttctgccgtttattgttttggtcctctccattagttttt 18139480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 12194471 - 12194529
Alignment:
Q  1 agttaagcatgcttgatttgtagcaattttaggatggatgacattttgggaagttttcc 59  Q
    ||||||||||| ||||  || ||||||||||||||||||||| |||| | |||||||||    
T  12194471 agttaagcatgtttgacatggagcaattttaggatggatgaccttttagaaagttttcc 12194529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 329
Target Start/End: Original strand, 31738408 - 31738486
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttttt 329  Q
    |||| |||||||||||| | ||||  ||||||  || ||||| ||  ||||||| ||||||||||||||||||||||||    
T  31738408 tcccctaactataaagtgtttcaatttggtcccataagtcttctgcggtttaccattttggtcctctccgttagttttt 31738486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 327
Target Start/End: Complemental strand, 2138708 - 2138632
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttt 327  Q
    |||| |||||||||||| ||||||  | |||| ||||||||| |||||||  |  ||||||||||||| ||||||||    
T  2138708 tcccctaactataaagtgtctcaatttagtcccttatgtcttctgtcgttacctcttttggtcctctctgttagttt 2138632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 331
Target Start/End: Complemental strand, 8412387 - 8412307
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttttttg 331  Q
    |||| |||||||||||| ||||||  ||||||  ||  |||| || |||||||  |||||||||||||||||||| |||||    
T  8412387 tcccctaactataaagtgtctcaatttggtcccataaatcttgtgccgtttactattttggtcctctccgttagtattttg 8412307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 354
Target Start/End: Original strand, 18773754 - 18773802
Alignment:
Q  306 ttttggtcctctccgttagttttttgatgtctaatatttttaatatgat 354  Q
    ||||||||||||| ||||||||||| |||||| || ||||| |||||||    
T  18773754 ttttggtcctctctgttagttttttaatgtctgatgtttttgatatgat 18773802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 329
Target Start/End: Complemental strand, 33802050 - 33802010
Alignment:
Q  289 tcttatgtcgtttaccgttttggtcctctccgttagttttt 329  Q
    |||| ||| ||||||||| ||||||||||||||||||||||    
T  33802050 tcttctgtagtttaccgtattggtcctctccgttagttttt 33802010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 2e-18; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 251 - 354
Target Start/End: Complemental strand, 15857689 - 15857586
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttttttgatgtctaatatttttaata 350  Q
    ||||||||||||||||| | ||||  || |||  ||  |||||||||||||||| |||||||| |||||||||||||||| |||| |||||||||| |||    
T  15857689 tcccttaactataaagtgtttcaatttgttcccataaatcttatgtcgtttaccattttggtcatctccgttagttttttaatgtttaatatttttgata 15857590  T
Q  351 tgat 354  Q
    ||||    
T  15857589 tgat 15857586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 351
Target Start/End: Complemental strand, 12936173 - 12936073
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttttttgatgtctaatatttttaata 350  Q
    |||| |||||||||||| ||||||  ||||||| || ||||||||  ||||||| |||||||| | |||||| ||||||| |||| || ||||||| |||    
T  12936173 tcccctaactataaagtgtctcaatttggtccaataagtcttatgctgtttaccattttggtcatttccgtttgttttttaatgtttactattttttata 12936074  T
Q  351 t 351  Q
    |    
T  12936073 t 12936073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 351
Target Start/End: Complemental strand, 12950331 - 12950231
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttttttgatgtctaatatttttaata 350  Q
    |||| |||||||||||| ||||||  ||||||| || ||||||||  ||||||| |||||||| | |||||| ||||||| |||| || ||||||| |||    
T  12950331 tcccctaactataaagtgtctcaatttggtccaataagtcttatgatgtttaccattttggtcatttccgtttgttttttaatgtttactattttttata 12950232  T
Q  351 t 351  Q
    |    
T  12950231 t 12950231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 297 - 351
Target Start/End: Complemental strand, 5384371 - 5384317
Alignment:
Q  297 cgtttaccgttttggtcctctccgttagttttttgatgtctaatatttttaatat 351  Q
    |||||||  ||||||||||||||||||||||||| |||| |||||||||| ||||    
T  5384371 cgtttactattttggtcctctccgttagttttttaatgtttaatatttttgatat 5384317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 354
Target Start/End: Original strand, 1273189 - 1273237
Alignment:
Q  306 ttttggtcctctccgttagttttttgatgtctaatatttttaatatgat 354  Q
    ||||||||| ||||||||||||||| |||| |||||||||| |||||||    
T  1273189 ttttggtcccctccgttagttttttaatgtttaatatttttgatatgat 1273237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 351
Target Start/End: Original strand, 19524028 - 19524127
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttttttgatgtctaatatttttaata 350  Q
    ||||||||||||||||| ||||||  ||||| || |  | || ||||||||||| |||||||| | |||||| ||||||| |||||||||| |||| |||    
T  19524028 tcccttaactataaagtgtctcaatttggtctataaatt-ttctgtcgtttaccattttggtcatgtccgtttgttttttaatgtctaataattttgata 19524126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 354
Target Start/End: Original strand, 41905275 - 41905323
Alignment:
Q  306 ttttggtcctctccgttagttttttgatgtctaatatttttaatatgat 354  Q
    ||||| ||||||||||||||||||| |||| | ||||||||||||||||    
T  41905275 ttttgatcctctccgttagttttttaatgtatcatatttttaatatgat 41905323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 309 - 352
Target Start/End: Complemental strand, 21389156 - 21389113
Alignment:
Q  309 tggtcctctccgttagttttttgatgtctaatatttttaatatg 352  Q
    |||||||||||||||||||||| |||||||| |||||| |||||    
T  21389156 tggtcctctccgttagttttttaatgtctaaaattttttatatg 21389113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 329
Target Start/End: Original strand, 42510159 - 42510237
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttttt 329  Q
    ||||||||||||||||| ||||||  ||||||  ||  |||| || |||||||  ||||||| ||||||||||||||||    
T  42510159 tcccttaactataaagtgtctcaatttggtcccataaatcttctgccgtttactattttggttctctccgttagttttt 42510237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 354
Target Start/End: Complemental strand, 8188213 - 8188168
Alignment:
Q  309 tggtcctctccgttagttttttgatgtctaatatttttaatatgat 354  Q
    |||||||||||||||||||||| |||||||| |||| | |||||||    
T  8188213 tggtcctctccgttagttttttaatgtctaaaatttctgatatgat 8188168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 327
Target Start/End: Original strand, 4566996 - 4567072
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttt 327  Q
    |||| |||||||||||| ||||||  |||||| ||||||||| |||||||  |  |||||||| |||| ||||||||    
T  4566996 tcccctaactataaagtgtctcaatttggtcccttatgtcttctgtcgttacctcttttggtcatctctgttagttt 4567072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 323
Target Start/End: Original strand, 15509240 - 15509312
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgtta 323  Q
    |||| |||||||||||| ||||||  |||||| ||||||||| || ||||  |  ||||||||||||||||||    
T  15509240 tcccctaactataaagtgtctcaatttggtcccttatgtcttctgccgttacctattttggtcctctccgtta 15509312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 327
Target Start/End: Complemental strand, 15510334 - 15510258
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttt 327  Q
    |||| |||||||||||| ||||||  |||||| ||||||||| || ||||  |  ||||||||||||| ||||||||    
T  15510334 tcccctaactataaagtgtctcaatttggtcccttatgtcttctgccgttacctcttttggtcctctctgttagttt 15510258  T

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Target: chr2 (Bit Score: 48; Significance: 2e-18; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 251 - 354
Target Start/End: Complemental strand, 4701558 - 4701455
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttttttgatgtctaatatttttaata 350  Q
    |||| |||||||||||| ||||||| || ||| ||||||||| || ||||| | |||||| ||||| |  |||||||||||||||||||||||||||| |    
T  4701558 tcccctaactataaagtgtctcaaactgatcccttatgtcttctgccgttttctgttttgatcctcgcaattagttttttgatgtctaatatttttaaca 4701459  T
Q  351 tgat 354  Q
    ||||    
T  4701458 tgat 4701455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 271 - 354
Target Start/End: Complemental strand, 36422772 - 36422689
Alignment:
Q  271 tcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttttttgatgtctaatatttttaatatgat 354  Q
    ||||| |||||| |||||| ||||||||||  |  ||||||| ||||| | ||||||||| |||||||||||||||||||||||    
T  36422772 tcaaattggtcccttatgtattatgtcgttatctattttggtactctcagatagttttttaatgtctaatatttttaatatgat 36422689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 295 - 354
Target Start/End: Complemental strand, 21012107 - 21012048
Alignment:
Q  295 gtcgtttaccgttttggtcctctccgttagttttttgatgtctaatatttttaatatgat 354  Q
    |||||||||  |||||||| |||||||||||||||  |||| ||||||||||||||||||    
T  21012107 gtcgtttactattttggtcatctccgttagtttttgaatgtataatatttttaatatgat 21012048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 256 - 327
Target Start/End: Original strand, 41312550 - 41312621
Alignment:
Q  256 taactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttt 327  Q
    |||||||||||||||||||  |||||  |||||||||||| ||||  |  ||||||||||||||||||||||    
T  41312550 taactataaagtatctcaatttggtctcttatgtcttatgccgttacctcttttggtcctctccgttagttt 41312621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 256 - 329
Target Start/End: Original strand, 23177724 - 23177797
Alignment:
Q  256 taactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttttt 329  Q
    |||||||||||| ||||||  ||||||  ||  |||| || |||||||| ||||||||||||||||||||||||    
T  23177724 taactataaagtgtctcaatttggtcccataaatcttctgccgtttaccattttggtcctctccgttagttttt 23177797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 256 - 329
Target Start/End: Original strand, 23588981 - 23589054
Alignment:
Q  256 taactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttttt 329  Q
    |||||||||||| ||||||  ||||||  ||  |||| || |||||||| ||||||||||||||||||||||||    
T  23588981 taactataaagtgtctcaatttggtcccataaatcttctgccgtttaccattttggtcctctccgttagttttt 23589054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 251 - 351
Target Start/End: Complemental strand, 35801116 - 35801015
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagtttttt-gatgtctaatatttttaat 349  Q
    ||||||||||||||||| | ||||  ||||||  ||  |||| || | ||||||  ||||||||||||||||| |||||| ||||||||||| |||||||    
T  35801116 tcccttaactataaagtgtttcaatttggtcccctaactcttctgccatttaccactttggtcctctccgttaatttttttgatgtctaataattttaat 35801017  T
Q  350 at 351  Q
    ||    
T  35801016 at 35801015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 327
Target Start/End: Original strand, 2305585 - 2305661
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttt 327  Q
    |||| |||||||||||| ||||||  |||||| ||||||||| || ||||  |  ||||||||||||||||||||||    
T  2305585 tcccctaactataaagtgtctcaatttggtcccttatgtcttctgccgttacctcttttggtcctctccgttagttt 2305661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 327
Target Start/End: Complemental strand, 2306732 - 2306656
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttt 327  Q
    |||| ||||| |||||| ||||||  |||||||||||||||| || ||||  |  ||||||||||||||||||||||    
T  2306732 tcccctaactgtaaagtgtctcaatttggtccattatgtcttctgccgttacctcttttggtcctctccgttagttt 2306656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 354
Target Start/End: Complemental strand, 4830691 - 4830643
Alignment:
Q  306 ttttggtcctctccgttagttttttgatgtctaatatttttaatatgat 354  Q
    |||| |||||||||||||||||||  ||||||||||||||| |||||||    
T  4830691 ttttagtcctctccgttagtttttgaatgtctaatatttttgatatgat 4830643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 306 - 345
Target Start/End: Complemental strand, 26206063 - 26206024
Alignment:
Q  306 ttttggtcctctccgttagttttttgatgtctaatatttt 345  Q
    ||||||||||||||||||||||||| ||| ||||||||||    
T  26206063 ttttggtcctctccgttagttttttaatgactaatatttt 26206024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 329
Target Start/End: Complemental strand, 37869111 - 37869033
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttttt 329  Q
    ||||||||||||||||| ||||||  | |||   || ||||| ||||||||||| |||||||| |||||||| ||||||    
T  37869111 tcccttaactataaagtgtctcaatttagtctcataagtcttctgtcgtttacctttttggtcttctccgtttgttttt 37869033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 289 - 354
Target Start/End: Complemental strand, 40174797 - 40174733
Alignment:
Q  289 tcttatgtcgtttaccgttttggtcctctccgttagttttttgatgtctaatatttttaatatgat 354  Q
    |||| ||| ||||||  |||||||| |||||||||||||||| |||| |||||||||| |||||||    
T  40174797 tcttctgttgtttactattttggtcatctccgttagttttttaatgt-taatattttttatatgat 40174733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 331
Target Start/End: Original strand, 15650486 - 15650566
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttttttg 331  Q
    |||| |||||||||||| ||||||  ||||   |||  |||||||||||||||  |||||||| ||||||||||| |||||    
T  15650486 tcccctaactataaagtgtctcaatttggtatcttaaatcttatgtcgtttactattttggtcatctccgttagtattttg 15650566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 329
Target Start/End: Original strand, 32614468 - 32614508
Alignment:
Q  289 tcttatgtcgtttaccgttttggtcctctccgttagttttt 329  Q
    |||||||||||||||| |||| |||||||||||| ||||||    
T  32614468 tcttatgtcgtttaccattttagtcctctccgtttgttttt 32614508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 327
Target Start/End: Original strand, 33836814 - 33836890
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttt 327  Q
    |||| |||||||||||| ||||||  |||||  ||||||||| | |||||  |  ||||||||||||||||||||||    
T  33836814 tcccctaactataaagtgtctcaatttggtcatttatgtcttctatcgttacctcttttggtcctctccgttagttt 33836890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 9e-18; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 256 - 354
Target Start/End: Original strand, 52741538 - 52741636
Alignment:
Q  256 taactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttttttgatgtctaatatttttaatatgat 354  Q
    |||||||||||| ||||||| || ||| ||||||||| |||| ||||  ||||||||||||||| |||||||||| |  |||| |||||||||||||||    
T  52741538 taactataaagtgtctcaaattgatcccttatgtcttctgtcatttattgttttggtcctctccattagttttttaacttctagtatttttaatatgat 52741636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 251 - 329
Target Start/End: Complemental strand, 52743047 - 52742969
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttttt 329  Q
    |||| |||||||||||| ||||||| |||||| ||| || ||||||||||||| ||| |||||||||||||||||||||    
T  52743047 tcccctaactataaagtgtctcaaattggtcccttaggttttatgtcgtttactgttatggtcctctccgttagttttt 52742969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 251 - 354
Target Start/End: Complemental strand, 36511402 - 36511299
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttttttgatgtctaatatttttaata 350  Q
    ||||||||||||||||| ||||||  ||||||  ||  |||| ||||||||||  |||||||| |||||||||||||| | |||| ||||||||  ||||    
T  36511402 tcccttaactataaagtgtctcaatttggtcccataaatcttctgtcgtttactattttggtcatctccgttagttttctaatgtataatatttcaaata 36511303  T
Q  351 tgat 354  Q
    ||||    
T  36511302 tgat 36511299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 329
Target Start/End: Complemental strand, 13930741 - 13930668
Alignment:
Q  256 taactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttttt 329  Q
    |||||||||||| ||||||  ||||||  || ||||||||||||||||| |||||||||| |||||| ||||||    
T  13930741 taactataaagtgtctcaatttggtcccataagtcttatgtcgtttaccattttggtcctttccgtttgttttt 13930668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 251 - 327
Target Start/End: Complemental strand, 2238049 - 2237973
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttt 327  Q
    |||| |||||||||||| ||||||  |||||| ||||||||| |||||||  |  ||||||||||||||||||||||    
T  2238049 tcccataactataaagtgtctcaatttggtcccttatgtcttctgtcgttacctcttttggtcctctccgttagttt 2237973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 311 - 354
Target Start/End: Complemental strand, 9417108 - 9417065
Alignment:
Q  311 gtcctctccgttagttttttgatgtctaatatttttaatatgat 354  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  9417108 gtcctctccgttagttttttaatgtataatatttttaatatgat 9417065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 256 - 329
Target Start/End: Complemental strand, 14071269 - 14071196
Alignment:
Q  256 taactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttttt 329  Q
    |||||||||||| ||||||  ||||||  || ||||| ||||||||||| |||||||||| |||||| ||||||    
T  14071269 taactataaagtgtctcaatttggtcccataagtcttctgtcgtttaccattttggtcctttccgtttgttttt 14071196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 309 - 354
Target Start/End: Original strand, 33941420 - 33941465
Alignment:
Q  309 tggtcctctccgttagttttttgatgtctaatatttttaatatgat 354  Q
    |||||||||| ||||||||||| |||||||| ||||||||||||||    
T  33941420 tggtcctctctgttagttttttaatgtctaacatttttaatatgat 33941465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 297 - 354
Target Start/End: Original strand, 47560230 - 47560286
Alignment:
Q  297 cgtttaccgttttggtcctctccgttagttttttgatgtctaatatttttaatatgat 354  Q
    ||||||| ||||||||| ||||||||| ||||||||||| ||||| ||||||||||||    
T  47560230 cgtttactgttttggtcatctccgttaattttttgatgtataata-ttttaatatgat 47560286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 331
Target Start/End: Complemental strand, 16218549 - 16218469
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttttttg 331  Q
    |||| |||||||||||||||||||  ||||||  ||  ||||||||||||||   |||||||| ||||||||||| |||||    
T  16218549 tcccctaactataaagtatctcaatttggtcccataaatcttatgtcgtttaatattttggtcatctccgttagtattttg 16218469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 307 - 354
Target Start/End: Original strand, 28999940 - 28999987
Alignment:
Q  307 tttggtcctctccgttagttttttgatgtctaatatttttaatatgat 354  Q
    ||||||||||||  |||||||||| |||| ||||||||||||||||||    
T  28999940 tttggtcctctctattagttttttaatgtataatatttttaatatgat 28999987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 251 - 330
Target Start/End: Complemental strand, 42248376 - 42248297
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagtttttt 330  Q
    |||| |||||||||||| ||||||  ||||||  ||  |||||||||||||||| |||| ||||||| |||||| |||||    
T  42248376 tcccataactataaagtgtctcaatttggtcctataaatcttatgtcgtttaccattttagtcctcttcgttagattttt 42248297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 308 - 351
Target Start/End: Original strand, 51217720 - 51217763
Alignment:
Q  308 ttggtcctctccgttagttttttgatgtctaatatttttaatat 351  Q
    ||||||||||||||||||||||| ||| ||||||||||| ||||    
T  51217720 ttggtcctctccgttagttttttaatgactaatatttttgatat 51217763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 329
Target Start/End: Complemental strand, 26056218 - 26056140
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttttt 329  Q
    |||| |||||||||||| ||||||  ||||||  ||  |||| ||||||||||  ||||||||||||||||||| ||||    
T  26056218 tcccctaactataaagtgtctcaatttggtcccataaatcttttgtcgtttactattttggtcctctccgttagatttt 26056140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 354
Target Start/End: Complemental strand, 34654354 - 34654308
Alignment:
Q  308 ttggtcctctccgttagttttttgatgtctaatatttttaatatgat 354  Q
    |||||||||||||||| |||||  ||| |||||||||||||||||||    
T  34654354 ttggtcctctccgttaatttttaaatgactaatatttttaatatgat 34654308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 144
Target Start/End: Original strand, 38341149 - 38341191
Alignment:
Q  102 gtgttagtttatggggtcagttggcaaccctgaaagcagtctg 144  Q
    ||||| ||||||||||||||| ||||| |||||||||||||||    
T  38341149 gtgttggtttatggggtcagtcggcaatcctgaaagcagtctg 38341191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 324
Target Start/End: Complemental strand, 3979384 - 3979311
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttag 324  Q
    ||||||||||||||||| ||||||  ||||||  ||  |||| || |||||||  |||||||||||||||||||    
T  3979384 tcccttaactataaagtgtctcaatttggtcccataattcttctgccgtttactattttggtcctctccgttag 3979311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 323
Target Start/End: Original strand, 2236858 - 2236930
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgtta 323  Q
    |||| |||||||||||| ||||||  |||||| ||||||||| |||||||  |  ||||| ||||||||||||    
T  2236858 tcccctaactataaagtgtctcaatttggtcccttatgtcttctgtcgttacctcttttgatcctctccgtta 2236930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 351
Target Start/End: Original strand, 13929340 - 13929440
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttttttgatgtctaatatttttaata 350  Q
    ||||||||||||||||| ||||||  ||||||  ||  |||| |  |||||| | | |||||||| ||||||  |||||| ||||||||||||||| |||    
T  13929340 tcccttaactataaagtgtctcaatttggtcccgtaaatcttcttccgtttatcatcttggtcctgtccgtttattttttaatgtctaatatttttgata 13929439  T
Q  351 t 351  Q
    |    
T  13929440 t 13929440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 331
Target Start/End: Original strand, 25786013 - 25786093
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttttttg 331  Q
    |||| |||||||||||| ||||||  ||||||  ||  ||||||||||||||   ||||||||||||| |||||| |||||    
T  25786013 tcccctaactataaagtgtctcaatttggtcccataaatcttatgtcgtttattattttggtcctctctgttagtattttg 25786093  T

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Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 354
Target Start/End: Original strand, 33793879 - 33793927
Alignment:
Q  306 ttttggtcctctccgttagttttttgatgtctaatatttttaatatgat 354  Q
    |||||||| || | |||||||||||||||||||||||  ||||||||||    
T  33793879 ttttggtcatcgcagttagttttttgatgtctaatataattaatatgat 33793927  T

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Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 323
Target Start/End: Original strand, 35683100 - 35683172
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgtta 323  Q
    |||| |||||||||||| ||||||  |||||| ||||||||| || ||||  |  ||||||||||||||||||    
T  35683100 tcccctaactataaagtgtctcaatttggtcccttatgtcttctgccgttacctcttttggtcctctccgtta 35683172  T

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Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 327
Target Start/End: Complemental strand, 35684273 - 35684198
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttt 327  Q
    |||| |||||||||| | ||||||  |||||| ||||||||| |||||||  |  ||||||||||||||||||||||    
T  35684273 tcccctaactataaa-tgtctcaatttggtcccttatgtcttctgtcgttacctcttttggtcctctccgttagttt 35684198  T

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Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 331
Target Start/End: Original strand, 47411029 - 47411109
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttttttg 331  Q
    |||| |||||||||||| ||||||  |||||   ||  |||||||||||||||  |||||||| ||||||||||| |||||    
T  47411029 tcccctaactataaagtgtctcaatttggtctcataaatcttatgtcgtttactattttggtcatctccgttagtattttg 47411109  T

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Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 327
Target Start/End: Complemental strand, 48935181 - 48935105
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttt 327  Q
    |||| |||||||||||| ||||||  |||||| ||||||||| || ||||  |  |||||||| |||||||||||||    
T  48935181 tcccctaactataaagtgtctcaatttggtcccttatgtcttctgccgttacctcttttggtcatctccgttagttt 48935105  T

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Target: scaffold0025 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 309 - 354
Target Start/End: Original strand, 54694 - 54739
Alignment:
Q  309 tggtcctctccgttagttttttgatgtctaatatttttaatatgat 354  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  54694 tggtcctctccgttagttttttgatgtctaatatttttaatatgat 54739  T

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Target: scaffold0024 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 251 - 354
Target Start/End: Complemental strand, 73057 - 72954
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttttttgatgtctaatatttttaata 350  Q
    |||| |||| ||||||| || |||| |||||  ||||||||| |||||||  |  ||||||||||||||||||||||||| |  | ||||||||||||||    
T  73057 tcccctaacaataaagtgtcacaaattggtctcttatgtcttctgtcgttacctcttttggtcctctccgttagtttttttaattataatatttttaata 72958  T
Q  351 tgat 354  Q
    ||||    
T  72957 tgat 72954  T

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Target: scaffold0084 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 306 - 346
Target Start/End: Original strand, 11806 - 11846
Alignment:
Q  306 ttttggtcctctccgttagttttttgatgtctaatattttt 346  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  11806 ttttggtcctctccgttagttttttaatgtctaatattttt 11846  T

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Target: scaffold0177 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 327
Target Start/End: Original strand, 1800 - 1876
Alignment:
Q  251 tcccttaactataaagtatctcaaagtggtccattatgtcttatgtcgtttaccgttttggtcctctccgttagttt 327  Q
    |||| ||| |||||||| ||||||  |||||| ||||||||| |||||||  |  ||||||||||||||||||||||    
T  1800 tcccctaattataaagtgtctcaatttggtcccttatgtcttctgtcgttacctcttttggtcctctccgttagttt 1876  T

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Target: scaffold0046 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 346
Target Start/End: Complemental strand, 24831 - 24791
Alignment:
Q  306 ttttggtcctctccgttagttttttgatgtctaatattttt 346  Q
    |||||||| |||||||||||||||| |||||||||||||||    
T  24831 ttttggtcatctccgttagttttttaatgtctaatattttt 24791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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