View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1542_high_8 (Length: 328)
Name: NF1542_high_8
Description: NF1542
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1542_high_8 |
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Alignment Details
Target: chr7 (Bit Score: 274; Significance: 1e-153; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 19 - 320
Target Start/End: Original strand, 47122522 - 47122823
Alignment:
| Q |
19 |
tttaagtccctaaacaagtgattaaaagtatattatttgtattctgtagtgtccatatacttctctgactcaaatatcatcctccggataaatttatata |
118 |
Q |
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| T |
47122522 |
tttaagtccttaaacgagtgactaaaagtatattatttgtattatgtagtgtccatatacttctctgactccaatgtcatcctccggataaatttatata |
47122621 |
T |
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| Q |
119 |
atcctttaacaaattgttttatctcaaataaaattattttcttataaaaacttaaaaatccacatcaaattgaaaattaccttgcaagcctaagtactta |
218 |
Q |
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| T |
47122622 |
atcctttaacaaattgttttatctcaaataaaattattttcttataaaaacttaaaaatccacatcaaattgaaaattaccttgcaagcctaagtactta |
47122721 |
T |
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| Q |
219 |
taatcaaaatggtcaagaaatgatattcacacattcatataagagacgcttttgctacaagctacatttgctaatttatctttaaaatacatgtttcatc |
318 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
47122722 |
taatcaaaatggtcaagaaatgatattcacacattcatataagagacgcttttgctacaagctacatttgctaatttatctttaatatacatgtttcatc |
47122821 |
T |
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| Q |
319 |
tc |
320 |
Q |
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|| |
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| T |
47122822 |
tc |
47122823 |
T |
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