View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15432_high_13 (Length: 332)

Name: NF15432_high_13
Description: NF15432
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15432_high_13
NF15432_high_13
[»] scaffold0796 (2 HSPs)
scaffold0796 (5-321)||(1656-1972)
scaffold0796 (5-321)||(5679-5995)
[»] chr3 (20 HSPs)
chr3 (3-322)||(24933753-24934070)
chr3 (10-250)||(41455092-41455332)
chr3 (3-245)||(10389443-10389687)
chr3 (3-245)||(10414532-10414776)
chr3 (3-245)||(10421202-10421446)
chr3 (70-242)||(20247791-20247966)
chr3 (60-244)||(9534196-9534382)
chr3 (70-244)||(14762758-14762935)
chr3 (70-242)||(38310802-38310977)
chr3 (57-242)||(24192820-24193009)
chr3 (60-245)||(23370505-23370693)
chr3 (193-307)||(13302180-13302292)
chr3 (181-250)||(16801462-16801531)
chr3 (163-244)||(17240513-17240595)
chr3 (193-307)||(13312836-13312948)
chr3 (193-307)||(13323727-13323839)
chr3 (193-244)||(18929249-18929300)
chr3 (193-245)||(12033444-12033496)
chr3 (193-245)||(17131735-17131787)
chr3 (193-245)||(51301592-51301644)
[»] chr7 (22 HSPs)
chr7 (1-250)||(12590638-12590887)
chr7 (10-250)||(13007253-13007492)
chr7 (70-249)||(18873238-18873420)
chr7 (136-250)||(12709838-12709952)
chr7 (136-250)||(13122909-13123023)
chr7 (136-250)||(13743655-13743769)
chr7 (70-244)||(15168053-15168230)
chr7 (70-248)||(14422862-14423043)
chr7 (60-244)||(16009445-16009631)
chr7 (70-240)||(10895795-10895968)
chr7 (136-242)||(16677239-16677348)
chr7 (136-242)||(17651475-17651584)
chr7 (193-244)||(11382871-11382922)
chr7 (193-244)||(11389348-11389399)
chr7 (193-250)||(21230954-21231011)
chr7 (193-245)||(20311051-20311103)
chr7 (136-244)||(13679438-13679548)
chr7 (209-250)||(831628-831669)
chr7 (209-250)||(1196808-1196849)
chr7 (209-250)||(34958578-34958619)
chr7 (193-245)||(2971257-2971309)
chr7 (193-245)||(20906461-20906513)
[»] scaffold0129 (1 HSPs)
scaffold0129 (3-250)||(45269-45517)
[»] chr6 (22 HSPs)
chr6 (3-245)||(34639986-34640229)
chr6 (3-245)||(34646660-34646903)
chr6 (3-322)||(25469630-25469944)
chr6 (10-250)||(12168184-12168423)
chr6 (10-250)||(19287093-19287332)
chr6 (10-250)||(19878277-19878516)
chr6 (10-250)||(19785864-19786103)
chr6 (10-250)||(19884053-19884292)
chr6 (70-244)||(23057816-23057993)
chr6 (127-250)||(930090-930214)
chr6 (109-250)||(18800354-18800498)
chr6 (60-244)||(23839066-23839253)
chr6 (57-250)||(29614141-29614337)
chr6 (60-245)||(10986180-10986368)
chr6 (229-321)||(14581076-14581167)
chr6 (127-244)||(4477793-4477912)
chr6 (193-250)||(24512838-24512895)
chr6 (193-244)||(9187499-9187550)
chr6 (193-244)||(25348491-25348542)
chr6 (193-242)||(25598648-25598697)
chr6 (193-245)||(20007946-20007998)
chr6 (174-245)||(31252406-31252478)
[»] chr4 (8 HSPs)
chr4 (1-245)||(53483515-53483760)
chr4 (57-250)||(8045827-8046022)
chr4 (165-250)||(11848088-11848174)
chr4 (193-245)||(15408143-15408195)
chr4 (193-244)||(8834900-8834951)
chr4 (193-244)||(13888646-13888697)
chr4 (193-242)||(14486664-14486713)
chr4 (209-250)||(15747551-15747592)
[»] chr5 (11 HSPs)
chr5 (10-249)||(23528451-23528690)
chr5 (60-250)||(38144531-38144723)
chr5 (70-249)||(22751019-22751201)
chr5 (127-244)||(28370055-28370173)
chr5 (127-244)||(19512322-19512441)
chr5 (163-244)||(18407944-18408026)
chr5 (163-244)||(23111200-23111282)
chr5 (193-245)||(22438747-22438799)
chr5 (193-245)||(19236903-19236955)
chr5 (193-245)||(22461159-22461211)
chr5 (193-245)||(22467783-22467835)
[»] chr2 (10 HSPs)
chr2 (1-245)||(5706023-5706267)
chr2 (127-250)||(26583764-26583887)
chr2 (127-244)||(6483654-6483772)
chr2 (127-244)||(6487121-6487239)
chr2 (70-244)||(19661454-19661630)
chr2 (163-244)||(23265115-23265197)
chr2 (163-244)||(23280183-23280265)
chr2 (193-244)||(21908363-21908414)
chr2 (193-245)||(10580-10632)
chr2 (193-245)||(25180929-25180981)
[»] chr8 (12 HSPs)
chr8 (10-250)||(17054412-17054651)
chr8 (136-250)||(23866561-23866675)
chr8 (127-245)||(44477559-44477678)
chr8 (127-245)||(44492717-44492836)
chr8 (60-242)||(8727735-8727920)
chr8 (163-244)||(23482053-23482135)
chr8 (136-244)||(18614217-18614327)
chr8 (193-258)||(25111980-25112045)
chr8 (193-244)||(29643386-29643437)
chr8 (193-244)||(39364924-39364975)
chr8 (193-250)||(14056558-14056615)
chr8 (193-245)||(24320670-24320722)
[»] chr1 (13 HSPs)
chr1 (10-250)||(41111856-41112095)
chr1 (60-244)||(20437024-20437211)
chr1 (193-321)||(20044876-20045003)
chr1 (163-244)||(32651545-32651627)
chr1 (178-244)||(18712787-18712854)
chr1 (193-244)||(19663517-19663568)
chr1 (193-244)||(11158097-11158148)
chr1 (193-244)||(20805325-20805376)
chr1 (193-242)||(10811785-10811834)
chr1 (193-245)||(20851132-20851184)
chr1 (193-245)||(20857759-20857811)
chr1 (193-245)||(21706279-21706331)
chr1 (193-245)||(21710821-21710873)
[»] scaffold0117 (2 HSPs)
scaffold0117 (57-250)||(1892-2087)
scaffold0117 (57-250)||(8569-8764)
[»] scaffold0026 (2 HSPs)
scaffold0026 (57-250)||(11845-12041)
scaffold0026 (60-245)||(111554-111741)
[»] scaffold0058 (1 HSPs)
scaffold0058 (102-250)||(202-351)
[»] scaffold1773 (1 HSPs)
scaffold1773 (70-250)||(1056-1238)
[»] scaffold0006 (1 HSPs)
scaffold0006 (70-250)||(50057-50239)
[»] scaffold0029 (3 HSPs)
scaffold0029 (70-250)||(111759-111943)
scaffold0029 (193-245)||(91202-91254)
scaffold0029 (193-245)||(96928-96980)
[»] scaffold0247 (1 HSPs)
scaffold0247 (57-250)||(11206-11402)
[»] scaffold0384 (1 HSPs)
scaffold0384 (193-321)||(15989-16116)
[»] scaffold0154 (1 HSPs)
scaffold0154 (127-250)||(30793-30918)
[»] scaffold0025 (1 HSPs)
scaffold0025 (57-242)||(14398-14587)
[»] scaffold0924 (1 HSPs)
scaffold0924 (127-250)||(745-870)
[»] scaffold0553 (2 HSPs)
scaffold0553 (60-245)||(10195-10383)
scaffold0553 (232-321)||(11008-11096)
[»] scaffold0544 (1 HSPs)
scaffold0544 (60-245)||(1525-1713)
[»] scaffold0456 (2 HSPs)
scaffold0456 (159-249)||(900-991)
scaffold0456 (159-249)||(8045-8136)
[»] scaffold0090 (1 HSPs)
scaffold0090 (181-250)||(18160-18230)
[»] scaffold0222 (1 HSPs)
scaffold0222 (163-244)||(16793-16875)
[»] scaffold0004 (1 HSPs)
scaffold0004 (163-244)||(116869-116951)
[»] scaffold0461 (1 HSPs)
scaffold0461 (163-244)||(8-90)
[»] scaffold0146 (1 HSPs)
scaffold0146 (163-244)||(13605-13687)
[»] scaffold0020 (1 HSPs)
scaffold0020 (163-244)||(101928-102010)
[»] scaffold0107 (1 HSPs)
scaffold0107 (193-250)||(40526-40583)
[»] scaffold0310 (1 HSPs)
scaffold0310 (193-245)||(17647-17699)
[»] scaffold0019 (1 HSPs)
scaffold0019 (193-245)||(135477-135529)
[»] scaffold0235 (1 HSPs)
scaffold0235 (193-243)||(22594-22644)
[»] scaffold0815 (1 HSPs)
scaffold0815 (190-259)||(1450-1519)
[»] scaffold0348 (1 HSPs)
scaffold0348 (193-321)||(9339-9467)
[»] scaffold0124 (1 HSPs)
scaffold0124 (193-244)||(34276-34327)
[»] scaffold0139 (1 HSPs)
scaffold0139 (193-244)||(14997-15048)
[»] scaffold0138 (1 HSPs)
scaffold0138 (193-244)||(12301-12352)
[»] scaffold2054 (1 HSPs)
scaffold2054 (163-250)||(686-775)
[»] scaffold0317 (1 HSPs)
scaffold0317 (136-244)||(1331-1441)
[»] scaffold0609 (1 HSPs)
scaffold0609 (174-245)||(5857-5929)
[»] scaffold0249 (1 HSPs)
scaffold0249 (172-245)||(13894-13969)
[»] scaffold0131 (1 HSPs)
scaffold0131 (193-245)||(1000-1052)
[»] scaffold0127 (1 HSPs)
scaffold0127 (193-245)||(10242-10294)
[»] scaffold0023 (1 HSPs)
scaffold0023 (193-245)||(135441-135493)
[»] scaffold0001 (1 HSPs)
scaffold0001 (193-245)||(493028-493079)


Alignment Details
Target: scaffold0796 (Bit Score: 273; Significance: 1e-152; HSPs: 2)
Name: scaffold0796
Description:

Target: scaffold0796; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 5 - 321
Target Start/End: Complemental strand, 1972 - 1656
Alignment:
Q  5 aataatcatcaattcatacaattcatcaaaaattcaatcaatgagtggattgcagcaacagcatggattaagctttcattcttaacattaaattccgaga 104  Q
    |||| ||||||||||||||||||||||| ||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1972 aatattcatcaattcatacaattcatcacaaattcaatcagttaatggattgcagcaacagcatggattaagctttcattcttaacattaaattccgaga 1873  T
Q  105 aaactaacatcatctttactcatcccatcagaatcatcatcaaaccctaattttcatattattttccaaaactattcaattaggtcaatttcagaaatta 204  Q
    |||||||||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  1872 aaactaacatcatccttactcattccatcagaatcatcatcaaaccctaactttcatattattttccaaaactattcaattaggtcaatttcaggaatta 1773  T
Q  205 tagattatgattattgagagatggtctcacccttaccttagttttgtaggaagaattaacacagcaaaccagctcctaagtttttcccccttgttcttgg 304  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  1772 tagattatgattattgagagatagtctcacccttaccttagttttgtaggaagaattaacacagcaaatcagctcctaagtttttcccccttgttcttgg 1673  T
Q  305 tttctcttgctttctct 321  Q
    |||||||||||||||||    
T  1672 tttctcttgctttctct 1656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796; HSP #2
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 5 - 321
Target Start/End: Complemental strand, 5995 - 5679
Alignment:
Q  5 aataatcatcaattcatacaattcatcaaaaattcaatcaatgagtggattgcagcaacagcatggattaagctttcattcttaacattaaattccgaga 104  Q
    |||| ||||||||||||||||||||||| ||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5995 aatattcatcaattcatacaattcatcacaaattcaatcagttaatggattgcagcaacagcatggattaagctttcattcttaacattaaattccgaga 5896  T
Q  105 aaactaacatcatctttactcatcccatcagaatcatcatcaaaccctaattttcatattattttccaaaactattcaattaggtcaatttcagaaatta 204  Q
    |||||||||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  5895 aaactaacatcatccttactcattccatcagaatcatcatcaaaccctaactttcatattattttccaaaactattcaattaggtcaatttcaggaatta 5796  T
Q  205 tagattatgattattgagagatggtctcacccttaccttagttttgtaggaagaattaacacagcaaaccagctcctaagtttttcccccttgttcttgg 304  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  5795 tagattatgattattgagagatagtctcacccttaccttagttttgtaggaagaattaacacagcaaatcagctcctaagtttttcccccttgttcttgg 5696  T
Q  305 tttctcttgctttctct 321  Q
    |||||||||||||||||    
T  5695 tttctcttgctttctct 5679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 265; Significance: 1e-148; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 3 - 322
Target Start/End: Complemental strand, 24934070 - 24933753
Alignment:
Q  3 caaataatcatcaattcatacaattcatcaaaaattcaatcaatgagtggattgcagcaacagcatggattaagctttcattcttaacattaaattccga 102  Q
    |||||| ||||||||||||||||| ||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  24934070 caaatattcatcaattcatacaatacatcaaaaattcaatcaattaatggattgcagcaacaacatggattaagctttcattcttaacattaaattccga 24933971  T
Q  103 gaaaactaacatcatctttactcatcccatcagaatcatcatcaaaccctaattttcatattattttccaaaactattcaattaggtcaatttcagaaat 202  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24933970 gaaaactaacatcatctttactcattccatcagaatcatcatcaaaccctaattttcatattattttccaaaactattcaattaggtcaatttcagaaat 24933871  T
Q  203 tatagattatgattattgagagatggtctcacccttaccttagttttgtaggaagaattaacacagcaaaccagctcctaagtttttcccccttgttctt 302  Q
    |||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||||| ||||| |||||||||||||||  ||||||||||||    
T  24933870 tatagattatgattattgagagatagtctcacccttaccttagaattgtaggaagaattaacaccgcaaatcagctcctaagtttt--ccccttgttctt 24933773  T
Q  303 ggtttctcttgctttctctg 322  Q
    ||||||||||||||||||||    
T  24933772 ggtttctcttgctttctctg 24933753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 10 - 250
Target Start/End: Complemental strand, 41455332 - 41455092
Alignment:
Q  10 tcatcaattcatacaattcatcaaaaattcaatcaatgagtggattgcagcaacagcatggattaagctttcattcttaacattaaattccgagaaaact 109  Q
    |||||||||||| ||| ||||| ||||||||||||||   |||||| |||||||   |||||||||| |||||||||| |||||||||| | ||||||||    
T  41455332 tcatcaattcattcaaatcatccaaaattcaatcaattcatggattacagcaaccatatggattaagatttcattcttgacattaaatttcaagaaaact 41455233  T
Q  110 aacatcatctttactcatcccatcagaatcatcatcaaaccctaattttcatattattttccaaaactattcaattaggtcaatttcagaaattatagat 209  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  41455232 aacatcatctttactcattccatcagaatcatcatcaatccctaattttcatcctattttccaaaactattcaattaggtcaatttcagaaattatagat 41455133  T
Q  210 tatgattattgagagatggtctcacccttaccttagttttg 250  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  41455132 tatgattattgagagatagtctcacccttaccttagttttg 41455092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 3 - 245
Target Start/End: Complemental strand, 10389687 - 10389443
Alignment:
Q  3 caaataatcatcaattcatacaattcatcaaaaattcaatcaatgagtggattgcagcaacagcatggattaagctttcattcttaacattaaattccga 102  Q
    |||||| ||||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||| ||||||||||||||||||| |||||||||||    
T  10389687 caaatattcatcaattcatacaattcatcaaaaattcaatcaattaatggattgcagcaacaacatgggttaagctttcattcttaacgttaaattccga 10389588  T
Q  103 g-aaaactaacatcatctttactcatcccatcagaatcatcatcaaaccctaattttcatattattttccaaaactattcaattaggtca-atttcagaa 200  Q
    | |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||| | |  ||||||||    
T  10389587 gaaaaactaacatcatctttacccattccatcagaatcatcatcaaaccctaattttcatattattcttaaaaactattcaattagattacttttcagaa 10389488  T
Q  201 attatagattatgattattgagagatggtctcacccttaccttag 245  Q
    |||||| ||||| || ||||| ||||  || ||||||||||||||    
T  10389487 attatacattataatcattgaaagataatcccacccttaccttag 10389443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 3 - 245
Target Start/End: Complemental strand, 10414776 - 10414532
Alignment:
Q  3 caaataatcatcaattcatacaattcatcaaaaattcaatcaatgagtggattgcagcaacagcatggattaagctttcattcttaacattaaattccga 102  Q
    |||||| |||||||||||||||||||||| |||||||||||||| | ||||||||||||||| ||||| ||||||||||||||||||| |||||||||||    
T  10414776 caaatattcatcaattcatacaattcatccaaaattcaatcaattaatggattgcagcaacaacatgggttaagctttcattcttaacgttaaattccga 10414677  T
Q  103 g-aaaactaacatcatctttactcatcccatcagaatcatcatcaaaccctaattttcatattattttccaaaactattcaattaggtca-atttcagaa 200  Q
    | |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||| | |  ||||||||    
T  10414676 gaaaaactaacatcatctttacccattccatcagaatcatcatcaaaccctaattttcatattattcttaaaaactattcaattagattacttttcagaa 10414577  T
Q  201 attatagattatgattattgagagatggtctcacccttaccttag 245  Q
    |||||| ||||| || ||||| ||||  || ||||||||||||||    
T  10414576 attatacattataatcattgaaagataatcccacccttaccttag 10414532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 3 - 245
Target Start/End: Complemental strand, 10421446 - 10421202
Alignment:
Q  3 caaataatcatcaattcatacaattcatcaaaaattcaatcaatgagtggattgcagcaacagcatggattaagctttcattcttaacattaaattccga 102  Q
    |||||| |||||||||||||||||||||| |||||||||||||| | ||||||||||||||| ||||| ||||||||||||||||||| |||||||||||    
T  10421446 caaatattcatcaattcatacaattcatccaaaattcaatcaattaatggattgcagcaacaacatgggttaagctttcattcttaacgttaaattccga 10421347  T
Q  103 g-aaaactaacatcatctttactcatcccatcagaatcatcatcaaaccctaattttcatattattttccaaaactattcaattaggtca-atttcagaa 200  Q
    | |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||| | |  ||||||||    
T  10421346 gaaaaactaacatcatctttacccattccatcagaatcatcatcaaaccctaattttcatattattcttaaaaactattcaattagattacttttcagaa 10421247  T
Q  201 attatagattatgattattgagagatggtctcacccttaccttag 245  Q
    |||||| ||||| || ||||| ||||  || ||||||||||||||    
T  10421246 attatacattataatcattgaaagataatcccacccttaccttag 10421202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 70 - 242
Target Start/End: Complemental strand, 20247966 - 20247791
Alignment:
Q  70 gattaagctttcattcttaacattaaattccgagaaaactaacatcatctttactcat--cccatcagaatcatcatcaaaccctaattttcatattatt 167  Q
    ||||||| ||||||||| ||||||| ||| | |||||| |||||| ||| |||| |||  ||| |||||||||||||||||||||||   |||  ||||     
T  20247966 gattaagttttcattctgaacattatattacaagaaaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatc 20247867  T
Q  168 ttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatggtctcacccttacct 242  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  20247866 ttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 20247791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 60 - 244
Target Start/End: Original strand, 9534196 - 9534382
Alignment:
Q  60 caacagcatggattaagctttcattcttaacattaaattccgagaaaactaacatcatctttactcatccca-tcagaatcatcatcaaaccctaatttt 158  Q
    |||||| || ||||||| ||||||||| ||||||| ||| | | | || |||||| |||  ||| ||| ||| |||||||||||||||||||||||   |    
T  9534196 caacagtatagattaagttttcattctaaacattacattacaacagaattaacatgatcaatacccattccactcagaatcatcatcaaaccctaaccct 9534295  T
Q  159 catattattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatggtctcacccttacctta 244  Q
    ||  ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  9534296 caatttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 9534382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 70 - 244
Target Start/End: Complemental strand, 14762935 - 14762758
Alignment:
Q  70 gattaagctttcattcttaacattaaattccgagaaaactaacatcatctttactcat--cccatcagaatcatcatcaaaccctaattttcatattatt 167  Q
    ||||||| ||||||||| ||||||| ||| | ||| || |||||| ||| |||| |||  ||| |||||||||||||||||||||||   |||  ||||     
T  14762935 gattaagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatc 14762836  T
Q  168 ttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatggtctcacccttacctta 244  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  14762835 ttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 14762758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 70 - 242
Target Start/End: Complemental strand, 38310977 - 38310802
Alignment:
Q  70 gattaagctttcattcttaacattaaattccgagaaaactaacatcatctttactcat--cccatcagaatcatcatcaaaccctaattttcatattatt 167  Q
    ||||||| ||||||||| ||||||| ||| | ||| || |||||| ||| |||| |||  ||| |||||||||||||||||||||||   |||  ||||     
T  38310977 gattaagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatc 38310878  T
Q  168 ttccaaaactattcaattaggtcaat-ttcagaaattatagattatgattattgagagatggtctcacccttacct 242  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  38310877 ttccaaaactatgcaattaggtcaatattcagaaattatagattatgattatcgagagatagtctcacccttacct 38310802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 57 - 242
Target Start/End: Original strand, 24192820 - 24193009
Alignment:
Q  57 cagcaacagcatggattaagctttcattcttaacattaaattccgagaaaactaacatcatctttactcat--cccatcagaatcatcatcaaaccctaa 154  Q
    |||||||||||| ||||||| ||||||||| ||||| | ||| | | | || |||||| ||| |||| |||  ||| |||||||||||||||||||||||    
T  24192820 cagcaacagcatagattaagttttcattctgaacatcacattacaacagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaa 24192919  T
Q  155 ttttcatattattttccaaaa-ctattcaattaggtcaattt-cagaaattatagattatgattattgagagatggtctcacccttacct 242  Q
       |||  |||| |||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  24192920 ccctcaatttatcttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 24193009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 60 - 245
Target Start/End: Complemental strand, 23370693 - 23370505
Alignment:
Q  60 caacagcatggattaagctttcattcttaacattaaattccgagaaaactaacatcatctttactcat-cccatcagaatcatcatcaaaccctaatttt 158  Q
    |||||| || ||||||| ||||||||| ||||||| ||| | | | || |||||| |||  ||| ||| ||| |||||||||||||||||||||||        
T  23370693 caacagtatagattaagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccca 23370594  T
Q  159 catattattttccaaaa-ctattcaattaggtcaattt-cagaaattatagattatgattattgagagatggtctcacccttaccttag 245  Q
    ||  |||| |||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  23370593 caatttatcttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtcccacccttaccttag 23370505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 193 - 307
Target Start/End: Complemental strand, 13302292 - 13302180
Alignment:
Q  193 tttcagaaattatagattatgattattgagagatggtctcacccttaccttagttttgtaggaagaattaacacagcaaaccagctcctaagtttttccc 292  Q
    |||||||||||| | |||||||||||||| ||||  |||||||||||||||||  |||||| || ||  ||||||||||| ||| ||||| |||  || |    
T  13302292 tttcagaaattacatattatgattattgaaagataatctcacccttaccttagaattgtagaaaaaa--aacacagcaaatcagttcctaggttcatctc 13302195  T
Q  293 ccttgttcttggttt 307  Q
    |||||||||||||||    
T  13302194 ccttgttcttggttt 13302180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 181 - 250
Target Start/End: Complemental strand, 16801531 - 16801462
Alignment:
Q  181 caattaggtcaattt-cagaaattatagattatgattattgagagatggtctcacccttaccttagttttg 250  Q
    |||| |||||||||| ||||||||||| || |||||||||||||||| |||||||||||||||||||||||    
T  16801531 caatcaggtcaattttcagaaattatatat-atgattattgagagatagtctcacccttaccttagttttg 16801462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 244
Target Start/End: Complemental strand, 17240595 - 17240513
Alignment:
Q  163 ttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatggtctcacccttacctta 244  Q
    |||||||| | ||| |||||||||| ||||||| ||||||||||  |||| |||||||||||||| |||||||||||||||||    
T  17240595 ttattttcaagaacaattcaattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 17240513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 307
Target Start/End: Complemental strand, 13312948 - 13312836
Alignment:
Q  193 tttcagaaattatagattatgattattgagagatggtctcacccttaccttagttttgtaggaagaattaacacagcaaaccagctcctaagtttttccc 292  Q
    ||||| |||||| | |||||||||||||| ||||  |||||||||||||||||  |||||| || ||  ||||||||||| ||| ||||| |||  || |    
T  13312948 tttcaaaaattacatattatgattattgaaagataatctcacccttaccttagaattgtagaaaaaa--aacacagcaaatcagttcctaggttcatctc 13312851  T
Q  293 ccttgttcttggttt 307  Q
    |||||||||||||||    
T  13312850 ccttgttcttggttt 13312836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 307
Target Start/End: Complemental strand, 13323839 - 13323727
Alignment:
Q  193 tttcagaaattatagattatgattattgagagatggtctcacccttaccttagttttgtaggaagaattaacacagcaaaccagctcctaagtttttccc 292  Q
    |||||||||||| | |||||||||||||| ||||  |||||||||||||||||  |||||| || ||  ||  ||||||| ||| ||||| ||| ||| |    
T  13323839 tttcagaaattacatattatgattattgaaagataatctcacccttaccttagaattgtagaaaaaa--aaatcagcaaatcagttcctaggttcttctc 13323742  T
Q  293 ccttgttcttggttt 307  Q
    |||||||||||||||    
T  13323741 ccttgttcttggttt 13323727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 244
Target Start/End: Original strand, 18929249 - 18929300
Alignment:
Q  193 tttcagaaattatagattatgattattgagagatggtctcacccttacctta 244  Q
    |||||||||||||| || |||||||||||||||| |||||||||||||||||    
T  18929249 tttcagaaattatatatcatgattattgagagatagtctcacccttacctta 18929300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 245
Target Start/End: Complemental strand, 12033496 - 12033444
Alignment:
Q  193 tttcagaaattatagattatgattattgagagatggtctcacccttaccttag 245  Q
    |||||||||||||| ||||||| |||||| ||||  || ||||||||||||||    
T  12033496 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 12033444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 17131735 - 17131787
Alignment:
Q  193 tttcagaaattatagattatgattattgagagatggtctcacccttaccttag 245  Q
    |||||||||||||| ||||||| |||||| ||||  || ||||||||||||||    
T  17131735 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 17131787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 51301592 - 51301644
Alignment:
Q  193 tttcagaaattatagattatgattattgagagatggtctcacccttaccttag 245  Q
    |||||||||||| | |||||||||||||  ||||  |||||||||||||||||    
T  51301592 tttcagaaattacatattatgattattggaagataatctcacccttaccttag 51301644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 202; Significance: 1e-110; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 12590887 - 12590638
Alignment:
Q  1 tccaaataatcatcaattcatacaattcatcaaaaattcaatcaatgagtggattgcagcaacagcatggattaagctttcattcttaacattaaattcc 100  Q
    |||||||| ||||||||  |||||||||||| |||||||||||||| | |||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  12590887 tccaaatattcatcaataaatacaattcatccaaaattcaatcaattaatggattacagcaacaacatggattaagctttcattcttaacattaaattcc 12590788  T
Q  101 gagaaaactaacatcatctttactcatcccatcagaatcatcatcaaaccctaattttcatattattttccaaaactattcaattaggtcaatttcagaa 200  Q
     |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  12590787 aagaaaactaacatcatctttactcattccatcagaatcatcatcaaaccctaactttcatattattttccaaaactattcaattaggtcaatttcagaa 12590688  T
Q  201 attatagattatgattattgagagatggtctcacccttaccttagttttg 250  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  12590687 attatagattatgattattgagagatagtctcacccttaccttagttttg 12590638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 10 - 250
Target Start/End: Original strand, 13007253 - 13007492
Alignment:
Q  10 tcatcaattcatacaattcatcaaaaattcaatcaatgagtggattgcagcaacagcatggattaagctttcattcttaacattaaattccgagaaaact 109  Q
    |||||||||||||||||||||| ||||||||||||||   |||||| |||||||| ||||||||||| |||| |||||||||||||||||| ||||| ||    
T  13007253 tcatcaattcatacaattcatccaaaattcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaagaaa-ct 13007351  T
Q  110 aacatcatctttactcatcccatcagaatcatcatcaaaccctaattttcatattattttccaaaactattcaattaggtcaatttcagaaattatagat 209  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  13007352 aacatcatctttactcattccatcagaatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaatttcagaaattatagat 13007451  T
Q  210 tatgattattgagagatggtctcacccttaccttagttttg 250  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  13007452 tatgattattgagagatagtctcacccttaccttagttttg 13007492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 70 - 249
Target Start/End: Original strand, 18873238 - 18873420
Alignment:
Q  70 gattaagctttcattcttaacattaaattccgagaaaactaacatcatctttactcat--cccatcagaatcatcatcaaaccctaattttcatattatt 167  Q
    ||||||| ||||||||| ||||||| ||| | ||| || |||||| ||| |||| |||  ||| |||||||||||||||||||||||   |||  ||||     
T  18873238 gattaagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatc 18873337  T
Q  168 ttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatggtctcacccttaccttagtttt 249  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||  ||||||||||||||||||||||    
T  18873338 ttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagaaagtctcacccttaccttagtttt 18873420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 136 - 250
Target Start/End: Complemental strand, 12709952 - 12709838
Alignment:
Q  136 aatcatcatcaaaccctaattttcatattattttccaaaactattcaattaggtcaatttcagaaattatagattatgattattgagagatggtctcacc 235  Q
    |||||||||||||||||||   |||  ||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||    
T  12709952 aatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaatttcaggaattataaattatgattattgagagatagtctcacc 12709853  T
Q  236 cttaccttagttttg 250  Q
    |||||||||||||||    
T  12709852 cttaccttagttttg 12709838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 136 - 250
Target Start/End: Complemental strand, 13123023 - 13122909
Alignment:
Q  136 aatcatcatcaaaccctaattttcatattattttccaaaactattcaattaggtcaatttcagaaattatagattatgattattgagagatggtctcacc 235  Q
    |||||||||||||||||||   |||  ||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||    
T  13123023 aatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaatttcaggaattataaattatgattattgagagatagtctcacc 13122924  T
Q  236 cttaccttagttttg 250  Q
    |||||||||||||||    
T  13122923 cttaccttagttttg 13122909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 136 - 250
Target Start/End: Original strand, 13743655 - 13743769
Alignment:
Q  136 aatcatcatcaaaccctaattttcatattattttccaaaactattcaattaggtcaatttcagaaattatagattatgattattgagagatggtctcacc 235  Q
    |||||||||||||||||||   |||  ||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||    
T  13743655 aatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaatttcaggaattataaattatgattattgagagatagtctcacc 13743754  T
Q  236 cttaccttagttttg 250  Q
    |||||||||||||||    
T  13743755 cttaccttagttttg 13743769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 70 - 244
Target Start/End: Original strand, 15168053 - 15168230
Alignment:
Q  70 gattaagctttcattcttaacattaaattccgagaaaactaacatcatctttactcat--cccatcagaatcatcatcaaaccctaattttcatattatt 167  Q
    ||||||| ||||||||| ||||||| ||| | ||| || |||||| ||| |||| |||  ||| |||||||||||||||||||||||   |||  ||||     
T  15168053 gattaagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatc 15168152  T
Q  168 ttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatggtctcacccttacctta 244  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  15168153 ttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagatagtctcacccttacctta 15168230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 70 - 248
Target Start/End: Original strand, 14422862 - 14423043
Alignment:
Q  70 gattaagctttcattcttaacattaaattccgagaaaactaacatcatctttactcat-cccatcagaatcatcatcaaaccctaattttcatattattt 168  Q
    ||||||| ||||||||| ||||||| ||| | | | || |||||| |||  ||| ||| ||| |||||||||||||||||||||||   |||  |||| |    
T  14422862 gattaagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaatttatct 14422961  T
Q  169 tccaaaa-ctattcaattaggtcaattt-cagaaattatagattatgattattgagagatggtctcacccttaccttagttt 248  Q
    ||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  14422962 tccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttt 14423043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 60 - 244
Target Start/End: Original strand, 16009445 - 16009631
Alignment:
Q  60 caacagcatggattaagctttcattcttaacattaaattccgagaaaactaacatcatctttactcat-cccatcagaatcatcatcaaaccctaatttt 158  Q
    |||||| || ||||||| ||||||||| ||||||| ||| | | | || |||||| |||  ||| ||| ||| ||||||||||||||||||| |||        
T  16009445 caacagtatagattaagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcccctcagaatcatcatcaaaccttaaccca 16009544  T
Q  159 catattattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatggtctcacccttacctta 244  Q
    ||  |||| ||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  16009545 caatttatcttccaaaaccatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 16009631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 70 - 240
Target Start/End: Complemental strand, 10895968 - 10895795
Alignment:
Q  70 gattaagctttcattcttaacattaaattccgagaaaactaacatcatctttactcat-cccatcagaatcatcatcaaaccctaattttcatattattt 168  Q
    ||||||| ||||||||| ||||||| ||| | ||| || |||||| |||  ||| ||| ||| |||||||||||||||||||||||    ||  |||| |    
T  10895968 gattaagttttcattctgaacattatattacaagagaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaacccacaatttatct 10895869  T
Q  169 tccaaaa-ctattcaattaggtcaattt-cagaaattatagattatgattattgagagatggtctcacccttac 240  Q
    ||||||| |||| ||||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||    
T  10895868 tccaaaaactatgcaattaggtcaattttcaaaaattatagattatgattattgagagatagtctcacccttac 10895795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 136 - 242
Target Start/End: Original strand, 16677239 - 16677348
Alignment:
Q  136 aatcatcatcaaaccctaa-ttttcatattattttcc-aaaactattcaattaggtcaa-tttcagaaattatagattatgattattgagagatggtctc 232  Q
    |||||||||||||||||||   || || |||| |||| |||||||| |||||||||||| ||| |||||||||||||||||||||||||||||| |||||    
T  16677239 aatcatcatcaaaccctaacccttaattttatcttccaaaaactatgcaattaggtcaatttttagaaattatagattatgattattgagagatagtctc 16677338  T
Q  233 acccttacct 242  Q
    ||||||||||    
T  16677339 acccttacct 16677348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 136 - 242
Target Start/End: Original strand, 17651475 - 17651584
Alignment:
Q  136 aatcatcatcaaaccctaa-ttttcatattattttcc-aaaactattcaattaggtcaa-tttcagaaattatagattatgattattgagagatggtctc 232  Q
    |||||||||||||||||||   || || |||| |||| |||||||| |||||||||||| ||| |||||||||||||||||||||||||||||| |||||    
T  17651475 aatcatcatcaaaccctaacccttaattttatcttccaaaaactatgcaattaggtcaatttttagaaattatagattatgattattgagagatagtctc 17651574  T
Q  233 acccttacct 242  Q
    ||||||||||    
T  17651575 acccttacct 17651584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 193 - 244
Target Start/End: Complemental strand, 11382922 - 11382871
Alignment:
Q  193 tttcagaaattatagattatgattattgagagatggtctcacccttacctta 244  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  11382922 tttcagaaattatatattatgattattgagagatagtctcacccttacctta 11382871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 193 - 244
Target Start/End: Complemental strand, 11389399 - 11389348
Alignment:
Q  193 tttcagaaattatagattatgattattgagagatggtctcacccttacctta 244  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  11389399 tttcagaaattatatattatgattattgagagatagtctcacccttacctta 11389348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 193 - 250
Target Start/End: Complemental strand, 21231011 - 21230954
Alignment:
Q  193 tttcagaaattatagattatgattattgagagatggtctcacccttaccttagttttg 250  Q
    |||||||||||||| | ||||||||||||||||| |||||||||||||||||| ||||    
T  21231011 tttcagaaattatatactatgattattgagagatagtctcacccttaccttagatttg 21230954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 193 - 245
Target Start/End: Complemental strand, 20311103 - 20311051
Alignment:
Q  193 tttcagaaattatagattatgattattgagagatggtctcacccttaccttag 245  Q
    ||||||||||||||  |||||||||||||||||| ||||||||||||||||||    
T  20311103 tttcagaaattatacgttatgattattgagagatagtctcacccttaccttag 20311051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 244
Target Start/End: Original strand, 13679438 - 13679548
Alignment:
Q  136 aatcatcatcaaaccctaattttca-tattattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatggtctca 233  Q
    ||||| ||||||||||||||| ||| | ||||  || | ||| ||| |||||| ||||||| || |||||||| || ||||| ||||| |||| ||||||    
T  13679438 aatcagcatcaaaccctaattctcagttttatcatcaagaacaatttaattagatcaattttcaaaaattatatatcatgatcattgaaagatagtctca 13679537  T
Q  234 cccttacctta 244  Q
    |||||||||||    
T  13679538 cccttacctta 13679548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 250
Target Start/End: Complemental strand, 831669 - 831628
Alignment:
Q  209 ttatgattattgagagatggtctcacccttaccttagttttg 250  Q
    |||| ||||||||||| | |||||||||||||||||||||||    
T  831669 ttataattattgagagttagtctcacccttaccttagttttg 831628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 250
Target Start/End: Complemental strand, 1196849 - 1196808
Alignment:
Q  209 ttatgattattgagagatggtctcacccttaccttagttttg 250  Q
    |||| ||||||||||| | |||||||||||||||||||||||    
T  1196849 ttataattattgagagttagtctcacccttaccttagttttg 1196808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 250
Target Start/End: Original strand, 34958578 - 34958619
Alignment:
Q  209 ttatgattattgagagatggtctcacccttaccttagttttg 250  Q
    |||| ||||||||||| | |||||||||||||||||||||||    
T  34958578 ttataattattgagagttagtctcacccttaccttagttttg 34958619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 2971257 - 2971309
Alignment:
Q  193 tttcagaaattatagattatgattattgagagatggtctcacccttaccttag 245  Q
    |||||||||||||| ||||||| |||||| ||||  || ||||||||||||||    
T  2971257 tttcagaaattataaattatgactattgaaagataatcccacccttaccttag 2971309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 245
Target Start/End: Complemental strand, 20906513 - 20906461
Alignment:
Q  193 tttcagaaattatagattatgattattgagagatggtctcacccttaccttag 245  Q
    |||||||||||||| ||||||| |||||| ||||  || ||||||||||||||    
T  20906513 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 20906461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 3 - 250
Target Start/End: Complemental strand, 45517 - 45269
Alignment:
Q  3 caaataatcatcaattcatacaattcatcaaaaattcaatcaatgagtggattgcagcaacagcatggattaagctttcattcttaacattaaattccga 102  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||  |||||||| ||    
T  45517 caaataatcatcaattcatacaattcatcaaaaattcaatctatgaatggattgcagcaacaacatggattaagctttcattcttaatgttaaattcaga 45418  T
Q  103 gaaaactaacatcatctttactcatcccatcagaatcatcatcaaaccctaattttcatatta-ttttccaaaactattcaattaggtcaatttcagaaa 201  Q
    ||||||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||    
T  45417 gaaaactaacatcgtctttactcattccattagaatcatcatcaaaccctaattttcatattatttttcaaaaactattcaattaggtcaatttcaggaa 45318  T
Q  202 ttatagattatgattattgagagatggtctcacccttaccttagttttg 250  Q
    ||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  45317 ttatagattatgattattgagagatagtctcacccttaccttagatttg 45269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 188; Significance: 1e-102; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 3 - 245
Target Start/End: Complemental strand, 34640229 - 34639986
Alignment:
Q  3 caaataatcatcaattcatacaattcatcaaaaattcaatcaatgagtggattgcagcaacagcatggattaagctttcattcttaacattaaattccga 102  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||| ||||||||||| ||||||||||||| |||||||| ||    
T  34640229 caaataatcatcaattcatacaattcatcaaaaattcagtcaataagtggattgcggcaacaacatggattaagttttcattcttaacgttaaattcaga 34640130  T
Q  103 gaaaactaacatcatctttactcatcccatcagaatcatcatcaaaccctaattttcatattattttccaaaactattcaattaggtcaa-tttcagaaa 201  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  34640129 gaaaactaacatcatctttactcattccatcagaaccatcatcaaaccctaattttcttattattttccaaaactattcaattaggtcaattttcagaaa 34640030  T
Q  202 ttatagattatgattattgagagatggtctcacccttaccttag 245  Q
    |||||||||| |||||||||||||| ||||||||||||||||||    
T  34640029 ttatagattaagattattgagagatagtctcacccttaccttag 34639986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 3 - 245
Target Start/End: Complemental strand, 34646903 - 34646660
Alignment:
Q  3 caaataatcatcaattcatacaattcatcaaaaattcaatcaatgagtggattgcagcaacagcatggattaagctttcattcttaacattaaattccga 102  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||| ||||||||||| ||||||||||||| |||||||| ||    
T  34646903 caaataatcatcaattcatacaattcatcaaaaattcagtcaataagtggattgcggcaacaacatggattaagttttcattcttaacgttaaattcaga 34646804  T
Q  103 gaaaactaacatcatctttactcatcccatcagaatcatcatcaaaccctaattttcatattattttccaaaactattcaattaggtcaa-tttcagaaa 201  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||||    
T  34646803 gaaaactaacatcatctttactcattccatcagaaccatcatcaaaccctaattttcttattattttccaaaattattcaattaggtcaattttcagaaa 34646704  T
Q  202 ttatagattatgattattgagagatggtctcacccttaccttag 245  Q
    |||||||||| |||||||||||||| ||||||||||||||||||    
T  34646703 ttatagattaagattattgagagatagtctcacccttaccttag 34646660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 3 - 322
Target Start/End: Complemental strand, 25469944 - 25469630
Alignment:
Q  3 caaataatcatcaattcatacaattcatcaaaaattcaatcaatgagtggattgcagcaacagcatggattaagctttcattcttaacattaaattccga 102  Q
    |||||| ||||||||||||||||||||||||| ||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||| | | |||||    
T  25469944 caaatattcatcaattcatacaattcatcaaacattcaatcaattaatggattgcagcaacaacatggattaagctttcattcttaacatcagactccga 25469845  T
Q  103 gaaaactaacatcatcttt-actcatcccatcagaatcatcatcaaaccctaattttcatattattttccaaaactattcaattaggtcaatttcagaaa 201  Q
     ||  |||||||||||||| |||||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||    
T  25469844 taa--ctaacatcatcttttactcattccatcagaattatcatcaaaccctaattttcatattattttccaaaaccattcaattaggtcaatttcag-aa 25469748  T
Q  202 ttatagattatgattattgagagatggtctcacccttaccttagttttgtaggaagaattaacacagcaaaccagctcctaagtttttcccccttgttct 301  Q
    ||||||||||||||||||||||||| ||||||||||||||||||  ||||| |||| ||||||||||| || | ||||||||||||   |||||||||||    
T  25469747 ttatagattatgattattgagagatagtctcacccttaccttag-attgtaagaaggattaacacagc-aatcggctcctaagttt---ccccttgttct 25469653  T
Q  302 tgg--tttctcttgctttctctg 322  Q
    |||  ||||||||||||||||||    
T  25469652 tggtttttctcttgctttctctg 25469630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 10 - 250
Target Start/End: Original strand, 12168184 - 12168423
Alignment:
Q  10 tcatcaattcatacaattcatcaaaaattcaatcaatgagtggattgcagcaacagcatggattaagctttcattcttaacattaaattccgagaaaact 109  Q
    |||||||||||||||||||||| ||||||||||||||   |||||| |||||||| ||||||||||| |||| |||||||||||||||||| ||||| ||    
T  12168184 tcatcaattcatacaattcatccaaaattcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaagaaa-ct 12168282  T
Q  110 aacatcatctttactcatcccatcagaatcatcatcaaaccctaattttcatattattttccaaaactattcaattaggtcaatttcagaaattatagat 209  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  12168283 aacatcatctttactcattccatcagaatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaatttcagaaattatagat 12168382  T
Q  210 tatgattattgagagatggtctcacccttaccttagttttg 250  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  12168383 tatgattattgagagatagtctcacccttaccttagttttg 12168423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 10 - 250
Target Start/End: Original strand, 19287093 - 19287332
Alignment:
Q  10 tcatcaattcatacaattcatcaaaaattcaatcaatgagtggattgcagcaacagcatggattaagctttcattcttaacattaaattccgagaaaact 109  Q
    |||||||||||||||||||||| ||||||||||||||   |||||| |||||||| ||||||||||| |||| |||||||||||||||||| ||||| ||    
T  19287093 tcatcaattcatacaattcatccaaaattcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaagaaa-ct 19287191  T
Q  110 aacatcatctttactcatcccatcagaatcatcatcaaaccctaattttcatattattttccaaaactattcaattaggtcaatttcagaaattatagat 209  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  19287192 aacatcatctttactcattccatcagaatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaatttcagaaattatagat 19287291  T
Q  210 tatgattattgagagatggtctcacccttaccttagttttg 250  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  19287292 tatgattattgagagatagtctcacccttaccttagttttg 19287332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 10 - 250
Target Start/End: Original strand, 19878277 - 19878516
Alignment:
Q  10 tcatcaattcatacaattcatcaaaaattcaatcaatgagtggattgcagcaacagcatggattaagctttcattcttaacattaaattccgagaaaact 109  Q
    |||||||||||||||||||||| ||||||||||||||   |||||| |||||||| ||||||||||| |||| |||||||||||||||||| ||||| ||    
T  19878277 tcatcaattcatacaattcatccaaaattcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaagaaa-ct 19878375  T
Q  110 aacatcatctttactcatcccatcagaatcatcatcaaaccctaattttcatattattttccaaaactattcaattaggtcaatttcagaaattatagat 209  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  19878376 aacatcatctttactcattccatcagaatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaatttcagaaattatagat 19878475  T
Q  210 tatgattattgagagatggtctcacccttaccttagttttg 250  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  19878476 tatgattattgagagatagtctcacccttaccttagttttg 19878516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 10 - 250
Target Start/End: Complemental strand, 19786103 - 19785864
Alignment:
Q  10 tcatcaattcatacaattcatcaaaaattcaatcaatgagtggattgcagcaacagcatggattaagctttcattcttaacattaaattccgagaaaact 109  Q
    |||||||||||||||||||||| ||||||||||||||   |||||| |||||||| ||||||||||| |||| |||||||||||||||||| ||||| ||    
T  19786103 tcatcaattcatacaattcatccaaaattcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaagaaa-ct 19786005  T
Q  110 aacatcatctttactcatcccatcagaatcatcatcaaaccctaattttcatattattttccaaaactattcaattaggtcaatttcagaaattatagat 209  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  19786004 aacatcatctttactcattccatcagaatcatcatcaaaccctaactttcattttattttccaaaactattcaactaggtcaatttcagaaattatagat 19785905  T
Q  210 tatgattattgagagatggtctcacccttaccttagttttg 250  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  19785904 tatgattattgagagatagtctcacccttaccttagttttg 19785864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 10 - 250
Target Start/End: Original strand, 19884053 - 19884292
Alignment:
Q  10 tcatcaattcatacaattcatcaaaaattcaatcaatgagtggattgcagcaacagcatggattaagctttcattcttaacattaaattccgagaaaact 109  Q
    |||||||||||||||||||||| ||||||||||||||   |||||| |||||||| ||||||||||| |||| |||||||||||||||||| ||||| ||    
T  19884053 tcatcaattcatacaattcatccaaaattcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaagaaa-ct 19884151  T
Q  110 aacatcatctttactcatcccatcagaatcatcatcaaaccctaattttcatattattttccaaaactattcaattaggtcaatttcagaaattatagat 209  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  19884152 aacatcatctttactcattccatcagaatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaatttcagaaattatagat 19884251  T
Q  210 tatgattattgagagatggtctcacccttaccttagttttg 250  Q
    ||||||||||||||||| |||||||||| ||||||||||||    
T  19884252 tatgattattgagagatagtctcaccctaaccttagttttg 19884292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 70 - 244
Target Start/End: Original strand, 23057816 - 23057993
Alignment:
Q  70 gattaagctttcattcttaacattaaattccgagaaaactaacatcatctttactcat--cccatcagaatcatcatcaaaccctaattttcatattatt 167  Q
    ||||||| ||||||||| ||||||| ||| | ||| || |||||| ||| |||| |||  ||| |||||||||||||||||||||||   |||  ||||     
T  23057816 gattaagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatc 23057915  T
Q  168 ttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatggtctcacccttacctta 244  Q
    |||||||||||| ||||||||||||||| ||| ||||||||||||||||||| ||||||| |||||||||||||||||    
T  23057916 ttccaaaactatgcaattaggtcaattttcaggaattatagattatgattatcgagagatagtctcacccttacctta 23057993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 127 - 250
Target Start/End: Complemental strand, 930214 - 930090
Alignment:
Q  127 tcccatcagaatcatcatcaaaccctaattttcatattattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagaga 225  Q
    |||| |||||| ||||||||||||||||   |||  ||||||| ||||||||| ||||||||||||||| |||||| |||||||||||||||||||||||    
T  930214 tcccttcagaaacatcatcaaaccctaaccctcaatttatttttcaaaactatacaattaggtcaattttcagaaactatagattatgattattgagaga 930115  T
Q  226 tggtctcacccttaccttagttttg 250  Q
    | |||||||||||||||||||||||    
T  930114 tagtctcacccttaccttagttttg 930090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 109 - 250
Target Start/End: Original strand, 18800354 - 18800498
Alignment:
Q  109 taacatcatctttactcatcccatc-agaatcatcatcaaaccctaattttcatat-tattttccaaaactattcaattaggtcaattt-cagaaattat 205  Q
    |||||| ||| |||||||| || || |||||||||||||||||||||   |||  | |||||||||||||||  ||||||||||||||| ||||||||||    
T  18800354 taacatgatcattactcattccctccagaatcatcatcaaaccctaaccctcaattctattttccaaaactaagcaattaggtcaattttcagaaattat 18800453  T
Q  206 agattatgattattgagagatggtctcacccttaccttagttttg 250  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||    
T  18800454 agattatgattattgagagatagtctcacccttacattagttttg 18800498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 60 - 244
Target Start/End: Original strand, 23839066 - 23839253
Alignment:
Q  60 caacagcatggattaagctttcattcttaacattaaattccgagaaaactaacatcatctttactcat-cccatcagaatcatcatcaaaccctaatttt 158  Q
    |||||| || ||||||| ||||||||| ||||||| ||| | | | || |||||| |||  ||| ||| ||| | |||||||||||||||||||||   |    
T  23839066 caacagtatagattaagttttcattctgaacattacattacaacagaattaacatgatcaatacccattccccttagaatcatcatcaaaccctaaccct 23839165  T
Q  159 catattattttccaaa-actattcaattaggtcaattt-cagaaattatagattatgattattgagagatggtctcacccttacctta 244  Q
    ||  |||| ||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  23839166 caatttatcttccaaacactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 23839253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 57 - 250
Target Start/End: Complemental strand, 29614337 - 29614141
Alignment:
Q  57 cagcaacagcatggattaagctttcattcttaacattaaattccgagaaaactaacatcatctttactcat--cccatcagaatcatcatcaaaccctaa 154  Q
    |||||||| ||  ||||||| ||||||||| |||||| ||| |  ||| || |||||| ||| |||| |||  ||| ||| |||||||||||||||||||    
T  29614337 cagcaacaacaaagattaagttttcattctaaacattcaataca-agagaattaacatgatcattacccatttcccttcataatcatcatcaaaccctaa 29614239  T
Q  155 ttttcatatta-ttttccaaaactattcaattaggtcaa-tttcagaaattatagattatgattattgagagatggtctcacccttaccttagttttg 250  Q
       |||  ||| |||||||||| ||| ||| |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  29614238 ccctcaatttatttttccaaaattatgcaactaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttg 29614141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 60 - 245
Target Start/End: Complemental strand, 10986368 - 10986180
Alignment:
Q  60 caacagcatggattaagctttcattcttaacattaaattccgagaaaactaacatcatctttactcat-cccatcagaatcatcatcaaaccctaatttt 158  Q
    |||||| || ||||||| ||||||||| ||||||| ||| | | | || |||||| |||  ||| ||| ||| |||||||||||||||||||||||   |    
T  10986368 caacagtatagattaagttttcattctgaacattacattacaacagaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccct 10986269  T
Q  159 catattattttccaaaa-ctattcaattaggtcaatttc-agaaattatagattatgattattgagagatggtctcacccttaccttag 245  Q
    ||  |||| |||||||| |||| |||||||||||||||  ||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  10986268 caatttatcttccaaaaactatgcaattaggtcaatttttagaaattatagattatgattattgaaagatagtctcacccttaccttag 10986180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 229 - 321
Target Start/End: Complemental strand, 14581167 - 14581076
Alignment:
Q  229 tctcacccttaccttagttttgtaggaagaattaacacagcaaaccagctcctaagtttttcccccttgttcttggtttctcttgctttctct 321  Q
    |||||||||||||||||  ||| ||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||    
T  14581167 tctcacccttaccttagaattgcaggaagaattaacacagcaaaacagctcctaag-ttttcccccttgttattggtttctcttgctttctct 14581076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 127 - 244
Target Start/End: Original strand, 4477793 - 4477912
Alignment:
Q  127 tcccatcagaatcatcatcaaaccctaattttcatattattttccaaaa-ctattcaattaggtcaattt-cagaaattatagattatgattattgagag 224  Q
    |||| |||||||||||||||||||||||    ||  |||| |||||||| |||| ||||||||||||||| |||||||||||||||||||||||||||||    
T  4477793 tcccctcagaatcatcatcaaaccctaacccacaatttatcttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagag 4477892  T
Q  225 atggtctcacccttacctta 244  Q
    || |||||||||||||||||    
T  4477893 atagtctcacccttacctta 4477912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 193 - 250
Target Start/End: Complemental strand, 24512895 - 24512838
Alignment:
Q  193 tttcagaaattatagattatgattattgagagatggtctcacccttaccttagttttg 250  Q
    |||||||||||||| | ||||||||||||||||| |||||||||| ||||||| ||||    
T  24512895 tttcagaaattatatactatgattattgagagatagtctcaccctcaccttagatttg 24512838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 244
Target Start/End: Original strand, 9187499 - 9187550
Alignment:
Q  193 tttcagaaattatagattatgattattgagagatggtctcacccttacctta 244  Q
    |||||||||||||  |||| |||||||||||||| |||||||||||||||||    
T  9187499 tttcagaaattatgtattaagattattgagagatagtctcacccttacctta 9187550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 244
Target Start/End: Original strand, 25348491 - 25348542
Alignment:
Q  193 tttcagaaattatagattatgattattgagagatggtctcacccttacctta 244  Q
    ||||||||||| || | ||| ||||||||||||| |||||||||||||||||    
T  25348491 tttcagaaattctatactattattattgagagatagtctcacccttacctta 25348542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 242
Target Start/End: Original strand, 25598648 - 25598697
Alignment:
Q  193 tttcagaaattatagattatgattattgagagatggtctcacccttacct 242  Q
    ||||||||| |||| |||||||| |||||||| | |||||||||||||||    
T  25598648 tttcagaaaatatatattatgatcattgagagttagtctcacccttacct 25598697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 245
Target Start/End: Complemental strand, 20007998 - 20007946
Alignment:
Q  193 tttcagaaattatagattatgattattgagagatggtctcacccttaccttag 245  Q
    ||||| |||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  20007998 tttcataaattatatattatgactattgaaagatgatcccacccttaccttag 20007946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 245
Target Start/End: Original strand, 31252406 - 31252478
Alignment:
Q  174 aactattcaattaggtcaattt-cagaaattatagattatgattattgagagatggtctcacccttaccttag 245  Q
    |||||||||||||| | ||||| ||||||||||| ||||| || ||| | ||||  |||||||||||||||||    
T  31252406 aactattcaattagattaattttcagaaattatatattataatcattaaaagataatctcacccttaccttag 31252478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 186; Significance: 1e-101; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 53483515 - 53483760
Alignment:
Q  1 tccaaataatcatcaattcatacaattcatcaaaaattcaatcaatgagtggattgcagcaacagcatggattaagctttcattcttaacattaaattcc 100  Q
    |||| ||| ||||||||||||||||||||||||||||||| ||||| |||||||||| |||||| ||||||||||| ||||||||||||| ||||||||     
T  53483515 tccacatattcatcaattcatacaattcatcaaaaattcagtcaataagtggattgcggcaacaacatggattaagttttcattcttaacgttaaattca 53483614  T
Q  101 gagaaaactaacatcatctttactcatcccatcagaatcatcatcaaaccctaattttcatatta-ttttccaaaactattcaattaggtcaatttcaga 199  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||     
T  53483615 gagaaaactaacatcatctttactcattccatcagaatcatcatcaaaccctaattttcatattatttttcaaaaactattcaattaggtcaatttcagg 53483714  T
Q  200 aattatagattatgattattgagagatggtctcacccttaccttag 245  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  53483715 aattatagattatgattattgagagatagtctcacccttaccttag 53483760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 57 - 250
Target Start/End: Complemental strand, 8046022 - 8045827
Alignment:
Q  57 cagcaacagcatggattaagctttcattcttaacattaaattccgagaaaactaacatcatctttactcat--cccatcagaatcatcatcaaaccctaa 154  Q
    |||||||| || |||||||| ||||||||| ||||||| ||| | ||| || |||||| |||||||| |||  ||| |||||||  || |||||||||||    
T  8046022 cagcaacaacaaggattaagttttcattctgaacattatattacaagagaattaacattatctttacccatttcccttcagaattctcgtcaaaccctaa 8045923  T
Q  155 ttttcatattattttccaaaactattcaattaggtcaatttcagaaattatagattatgattattgagagatggtctcacccttaccttagttttg 250  Q
       |||  ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  8045922 ccctcaatttattttccaaaactatgcaattaggtcaatttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttg 8045827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 165 - 250
Target Start/End: Original strand, 11848088 - 11848174
Alignment:
Q  165 attttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatggtctcacccttaccttagttttg 250  Q
    ||||| ||||||||| | | ||||||||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  11848088 atttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttg 11848174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 15408143 - 15408195
Alignment:
Q  193 tttcagaaattatagattatgattattgagagatggtctcacccttaccttag 245  Q
    |||||||||||||| | ||||||||||||||||| ||||||||||||||||||    
T  15408143 tttcagaaattatatactatgattattgagagatagtctcacccttaccttag 15408195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 244
Target Start/End: Original strand, 8834900 - 8834951
Alignment:
Q  193 tttcagaaattatagattatgattattgagagatggtctcacccttacctta 244  Q
    |||||||||||||| |||||||| |||||||| | | |||||||||||||||    
T  8834900 tttcagaaattatatattatgatcattgagagttagcctcacccttacctta 8834951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 244
Target Start/End: Original strand, 13888646 - 13888697
Alignment:
Q  193 tttcagaaattatagattatgattattgagagatggtctcacccttacctta 244  Q
    |||||||||||||| |||||||| |||||||| | | |||||||||||||||    
T  13888646 tttcagaaattatacattatgatcattgagagttagcctcacccttacctta 13888697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 242
Target Start/End: Original strand, 14486664 - 14486713
Alignment:
Q  193 tttcagaaattatagattatgattattgagagatggtctcacccttacct 242  Q
    |||||||||||||| |||||||| |||||  ||| |||||||||||||||    
T  14486664 tttcagaaattatatattatgatcattgaaggatagtctcacccttacct 14486713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 250
Target Start/End: Complemental strand, 15747592 - 15747551
Alignment:
Q  209 ttatgattattgagagatggtctcacccttaccttagttttg 250  Q
    |||| ||||||||||| | |||||||||||||||||||||||    
T  15747592 ttataattattgagagttagtctcacccttaccttagttttg 15747551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 184; Significance: 1e-99; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 10 - 249
Target Start/End: Original strand, 23528451 - 23528690
Alignment:
Q  10 tcatcaattcatacaattcatcaaaaattcaatcaatgagtggattgcagcaacagcatggattaagctttcattcttaacattaaattccgagaaaact 109  Q
    |||||||||||||||||||||| ||||||||||||||   |||||| |||||||| ||||||||||| |||| |||||||||||||||||| ||||||||    
T  23528451 tcatcaattcatacaattcatccaaaattcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaagaaaact 23528550  T
Q  110 aacatcatctttactcatcccatcagaatcatcatcaaaccctaattttcatattattttccaaaactattcaattaggtcaatttcagaaattatagat 209  Q
    ||||||||| |||||||| |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  23528551 aacatcatccttactcattccatcagaatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaatttcagaaattatagat 23528650  T
Q  210 tatgattattgagagatggtctcacccttaccttagtttt 249  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  23528651 tatgattattgagagatagtctcacccttaccttagtttt 23528690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 60 - 250
Target Start/End: Complemental strand, 38144723 - 38144531
Alignment:
Q  60 caacagcatggattaagctttcattcttaacattaaattccgagaaaactaacatcatctttactcat-cccatcagaatcatcatcaaaccctaatttt 158  Q
    |||||| || ||||||| ||||||||| ||||||| ||| | | | || |||||| |||  ||| ||| ||| |||||||||||||||||||||||   |    
T  38144723 caacagtatagattaagttttcattctaaacattacattacaatagaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccct 38144624  T
Q  159 catattattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatggtctcacccttaccttagttttg 250  Q
    ||  ||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  38144623 caatttattttccaaaattatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttg 38144531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 70 - 249
Target Start/End: Original strand, 22751019 - 22751201
Alignment:
Q  70 gattaagctttcattcttaacattaaattccgagaaaactaacatcatctttactcat--cccatcagaatcatcatcaaaccctaattttcatattatt 167  Q
    ||||||| ||||||||| ||||||| ||| | ||| || |||||| ||| |||| |||  ||| |||||||||||||||||||||||   |||  ||||     
T  22751019 gattaagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatc 22751118  T
Q  168 ttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatggtctcacccttaccttagtttt 249  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||  ||||||||||||||||||||||    
T  22751119 ttccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagaaagtctcacccttaccttagtttt 22751201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 127 - 244
Target Start/End: Complemental strand, 28370173 - 28370055
Alignment:
Q  127 tcccatcagaatcatcatcaaaccctaattttcatattattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagaga 225  Q
    |||| ||| |||||||||||||||||||   |||  ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  28370173 tcccctcaaaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagaga 28370074  T
Q  226 tggtctcacccttacctta 244  Q
    | |||||||||||||||||    
T  28370073 tagtctcacccttacctta 28370055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 127 - 244
Target Start/End: Original strand, 19512322 - 19512441
Alignment:
Q  127 tcccatcagaatcatcatcaaaccctaattttcatattattttccaaaa-ctattcaattaggtcaattt-cagaaattatagattatgattattgagag 224  Q
    |||| ||| |||||||||||||||||||   |||  |||| |||||||| |||| ||||||||||||||| |||||||||||||||||||||||||||||    
T  19512322 tcccctcaaaatcatcatcaaaccctaaccctcaatttatcttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagag 19512421  T
Q  225 atggtctcacccttacctta 244  Q
    || |||||||||||||||||    
T  19512422 atagtctcacccttacctta 19512441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 163 - 244
Target Start/End: Complemental strand, 18408026 - 18407944
Alignment:
Q  163 ttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatggtctcacccttacctta 244  Q
    |||||||| | ||| |||||||||| ||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  18408026 ttattttcaagaacaattcaattagatcaattttcagaaattatatattatgattattgagagatagtctcacccttacctta 18407944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 163 - 244
Target Start/End: Complemental strand, 23111282 - 23111200
Alignment:
Q  163 ttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatggtctcacccttacctta 244  Q
    |||||||| | ||| |||||||||| ||||||| ||||||||||| | ||||||||||||||||| |||||||||||||||||    
T  23111282 ttattttcaagaacaattcaattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23111200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 193 - 245
Target Start/End: Complemental strand, 22438799 - 22438747
Alignment:
Q  193 tttcagaaattatagattatgattattgagagatggtctcacccttaccttag 245  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  22438799 tttcagaaattatacattatgattattgagagatagtctcacccttaccttag 22438747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 19236903 - 19236955
Alignment:
Q  193 tttcagaaattatagattatgattattgagagatggtctcacccttaccttag 245  Q
    |||||||||||||| ||||||| |||||| ||||  || ||||||||||||||    
T  19236903 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 19236955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 22461159 - 22461211
Alignment:
Q  193 tttcagaaattatagattatgattattgagagatggtctcacccttaccttag 245  Q
    |||||||||||||| ||||||| |||||| ||||  || ||||||||||||||    
T  22461159 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 22461211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 22467783 - 22467835
Alignment:
Q  193 tttcagaaattatagattatgattattgagagatggtctcacccttaccttag 245  Q
    |||||||||||||| ||||||| |||||| ||||  || ||||||||||||||    
T  22467783 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 22467835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 174; Significance: 1e-93; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 5706267 - 5706023
Alignment:
Q  1 tccaaataatcatcaattcatacaattcatcaaaaattcaatcaatgagtggattgcagcaacagcatggattaagctttcattcttaacattaaattcc 100  Q
    |||| ||| |||||||||||||||||||||||||| |||||||||| | ||||||| ||||||| ||||||| ||||||||||||||||||||||||||     
T  5706267 tccacatattcatcaattcatacaattcatcaaaatttcaatcaattaatggattgtagcaacaacatggatcaagctttcattcttaacattaaattca 5706168  T
Q  101 gagaaaactaacatcatctttactcatcccatcagaatcatcatcaaaccctaattttcatatta-ttttccaaaactattcaattaggtcaatttcaga 199  Q
    ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||     
T  5706167 gag-aaactaacatcatctttactcattccatcagaatcatcatcaaaccctaattttcatattatttttcaaaaactattcaattaggtcaatttcagg 5706069  T
Q  200 aattatagattatgattattgagagatggtctcacccttaccttag 245  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||    
T  5706068 aattatagattatgattaatgagagatagtctcacccttaccttag 5706023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 127 - 250
Target Start/End: Original strand, 26583764 - 26583887
Alignment:
Q  127 tcccatcagaatcatcatcaaaccctaattttcatattattttccaaaactattcaattaggtcaatttcagaaattatagattatgattattgagagat 226  Q
    |||| |||||||||||||||| ||||||   |||  ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  26583764 tcccctcagaatcatcatcaagccctaaccctcaatttattttccaaaactatgcaattaggtcaatttcagaaattatagattatgattattgagagat 26583863  T
Q  227 ggtctcacccttaccttagttttg 250  Q
     |||||||||||||||||||||||    
T  26583864 agtctcacccttaccttagttttg 26583887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 127 - 244
Target Start/End: Original strand, 6483654 - 6483772
Alignment:
Q  127 tcccatcagaatcatcatcaaaccctaattttcatattattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagaga 225  Q
    |||| ||| |||||||||||||||||||   |||  ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  6483654 tcccctcaaaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagaga 6483753  T
Q  226 tggtctcacccttacctta 244  Q
    | |||||||||||||||||    
T  6483754 tagtctcacccttacctta 6483772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 127 - 244
Target Start/End: Original strand, 6487121 - 6487239
Alignment:
Q  127 tcccatcagaatcatcatcaaaccctaattttcatattattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagaga 225  Q
    |||| ||| |||||||||||||||||||   |||  ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  6487121 tcccctcaaaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagaga 6487220  T
Q  226 tggtctcacccttacctta 244  Q
    | |||||||||||||||||    
T  6487221 tagtctcacccttacctta 6487239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 70 - 244
Target Start/End: Complemental strand, 19661630 - 19661454
Alignment:
Q  70 gattaagctttcattcttaacattaaattccgagaaaactaacatcatctttactcat-cccatcagaatcatcatcaaaccctaattttcatattattt 168  Q
    ||||||| ||||||||| ||||||| ||| | | | || |||||| |||  ||| ||| ||| |||||||||||||||||||||||   |||  |||| |    
T  19661630 gattaagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccctcaatttatct 19661531  T
Q  169 tccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatggtctcacccttacctta 244  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||  |||||||||||||||||    
T  19661530 tccaaaactatgcaattaggtcaattttcagaaattatagattatgattatcgagagaaagtctcacccttacctta 19661454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 163 - 244
Target Start/End: Original strand, 23265115 - 23265197
Alignment:
Q  163 ttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatggtctcacccttacctta 244  Q
    |||||||| | ||| |||||||||| ||||||| ||||||||||| | ||||||||||||||||| |||||||||||||||||    
T  23265115 ttattttcaagaacaattcaattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23265197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 163 - 244
Target Start/End: Original strand, 23280183 - 23280265
Alignment:
Q  163 ttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatggtctcacccttacctta 244  Q
    |||||||| | ||| |||||||||| ||||||| ||||||||||| | ||||||||||||||||| |||||||||||||||||    
T  23280183 ttattttcaagaacaattcaattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23280265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 244
Target Start/End: Original strand, 21908363 - 21908414
Alignment:
Q  193 tttcagaaattatagattatgattattgagagatggtctcacccttacctta 244  Q
    |||||||||||||| || |||||||||||||||| |||||||||||||||||    
T  21908363 tttcagaaattatatatcatgattattgagagatagtctcacccttacctta 21908414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 10580 - 10632
Alignment:
Q  193 tttcagaaattatagattatgattattgagagatggtctcacccttaccttag 245  Q
    |||||||||||||| ||||||| |||||| ||||  || ||||||||||||||    
T  10580 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 10632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 245
Target Start/End: Complemental strand, 25180981 - 25180929
Alignment:
Q  193 tttcagaaattatagattatgattattgagagatggtctcacccttaccttag 245  Q
    |||||||||||||| ||||||| |||||| ||||  || ||||||||||||||    
T  25180981 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 25180929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 169; Significance: 1e-90; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 10 - 250
Target Start/End: Original strand, 17054412 - 17054651
Alignment:
Q  10 tcatcaattcatacaattcatcaaaaattcaatcaatgagtggattgcagcaacagcatggattaagctttcattcttaacattaaattccgagaaaact 109  Q
    |||||||||||||||||||||| | ||||||||||||   |||||| |||||||| ||||||||||| |||| |||||||||||||||||| ||||| ||    
T  17054412 tcatcaattcatacaattcatccacaattcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaagaaa-ct 17054510  T
Q  110 aacatcatctttactcatcccatcagaatcatcatcaaaccctaattttcatattattttccaaaactattcaattaggtcaatttcagaaattatagat 209  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  17054511 aacatcatctttactcattccatcagaatcatcatcaaaccctaactttcatcttattttccaaaactattcaattaggtcaatttcaggaattatagat 17054610  T
Q  210 tatgattattgagagatggtctcacccttaccttagttttg 250  Q
    ||||||||||||||||| |||||||||||||||| ||||||    
T  17054611 tatgattattgagagatagtctcacccttaccttggttttg 17054651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 136 - 250
Target Start/End: Original strand, 23866561 - 23866675
Alignment:
Q  136 aatcatcatcaaaccctaattttcatattattttccaaaactattcaattaggtcaatttcagaaattatagattatgattattgagagatggtctcacc 235  Q
    |||||||||||||||||||   |||  ||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||    
T  23866561 aatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaatttcaggaattataaattatgattattgagagatagtctcacc 23866660  T
Q  236 cttaccttagttttg 250  Q
    |||||||||||||||    
T  23866661 cttaccttagttttg 23866675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 127 - 245
Target Start/End: Original strand, 44477559 - 44477678
Alignment:
Q  127 tcccatcagaatcatcatcaaaccctaattttcatattattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagaga 225  Q
    |||| ||| |||||||||||||||||||   |||  ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  44477559 tcccctcaaaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagaga 44477658  T
Q  226 tggtctcacccttaccttag 245  Q
    | ||||||||||||||||||    
T  44477659 tagtctcacccttaccttag 44477678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 127 - 245
Target Start/End: Original strand, 44492717 - 44492836
Alignment:
Q  127 tcccatcagaatcatcatcaaaccctaattttcatattattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagaga 225  Q
    |||| ||| |||||||||||||||||||   |||  ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  44492717 tcccctcaaaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagaga 44492816  T
Q  226 tggtctcacccttaccttag 245  Q
    | ||||||||||||||||||    
T  44492817 tagtctcacccttaccttag 44492836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 60 - 242
Target Start/End: Complemental strand, 8727920 - 8727735
Alignment:
Q  60 caacagcatggattaagctttcattcttaacattaaattccgagaaaactaacatcatctttactcat-cccatcagaatcatcatcaaaccctaatttt 158  Q
    |||||| || ||||||| ||||||||| ||||||| ||| | | | || |||||| |||  ||| ||| ||| ||||||||||| |||||||||||   |    
T  8727920 caacagtatagattaagttttcattctgaacattacattacaacagaattaacatgatcaatacccatacccctcagaatcatcgtcaaaccctaaccct 8727821  T
Q  159 catattattttccaaaa-ctattcaattaggtcaattt-cagaaattatagattatgattattgagagatggtctcacccttacct 242  Q
    ||  |||| |||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||| |||  ||||||||||||||    
T  8727820 caatttatcttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagggataatctcacccttacct 8727735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 163 - 244
Target Start/End: Complemental strand, 23482135 - 23482053
Alignment:
Q  163 ttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatggtctcacccttacctta 244  Q
    |||||||| | ||| |||||||||| ||||||| ||||||||||| | ||||||||||||||||| |||||||||||||||||    
T  23482135 ttattttcaagaacaattcaattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23482053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 136 - 244
Target Start/End: Original strand, 18614217 - 18614327
Alignment:
Q  136 aatcatcatcaaaccctaattttca-tattattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatggtctca 233  Q
    ||||| ||| ||||||||||| ||| | |||| ||| | ||| |||||||| | ||||||| ||||||||||| || |||||||||||||||| ||||||    
T  18614217 aatcagcataaaaccctaattctcaattttatcttcaagaacaattcaattggatcaattttcagaaattatatatcatgattattgagagatagtctca 18614316  T
Q  234 cccttacctta 244  Q
    |||||||||||    
T  18614317 cccttacctta 18614327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 193 - 258
Target Start/End: Original strand, 25111980 - 25112045
Alignment:
Q  193 tttcagaaattatagattatgattattgagagatggtctcacccttaccttagttttgtaggaaga 258  Q
    |||||||| ||| | | ||| ||||||||||||| |||||||||||||||||| ||||||| ||||    
T  25111980 tttcagaatttacatactattattattgagagatagtctcacccttaccttagatttgtagaaaga 25112045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 244
Target Start/End: Complemental strand, 29643437 - 29643386
Alignment:
Q  193 tttcagaaattatagattatgattattgagagatggtctcacccttacctta 244  Q
    |||||||||||| | |||||||||||||| ||||  ||||||||||||||||    
T  29643437 tttcagaaattacatattatgattattgaaagataatctcacccttacctta 29643386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 244
Target Start/End: Original strand, 39364924 - 39364975
Alignment:
Q  193 tttcagaaattatagattatgattattgagagatggtctcacccttacctta 244  Q
    ||||||||||| || | ||| ||||||||||||| |||||||||||||||||    
T  39364924 tttcagaaattctatactattattattgagagatagtctcacccttacctta 39364975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 250
Target Start/End: Complemental strand, 14056615 - 14056558
Alignment:
Q  193 tttcagaaattatagattatgattattgagagatggtctcacccttaccttagttttg 250  Q
    |||||||| ||| | | ||| ||||||||||||| |||||||||||||||||| ||||    
T  14056615 tttcagaatttacatactattattattgagagatagtctcacccttaccttagatttg 14056558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 245
Target Start/End: Complemental strand, 24320722 - 24320670
Alignment:
Q  193 tttcagaaattatagattatgattattgagagatggtctcacccttaccttag 245  Q
    |||||||||||||| ||||||| |||||| ||||  || ||||||||||||||    
T  24320722 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 24320670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 169; Significance: 1e-90; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 10 - 250
Target Start/End: Original strand, 41111856 - 41112095
Alignment:
Q  10 tcatcaattcatacaattcatcaaaaattcaatcaatgagtggattgcagcaacagcatggattaagctttcattcttaacattaaattccgagaaaact 109  Q
    |||||||||||||||||||||| ||||||||||||||   |||||| |||||||| ||||||||||| |||| |||||||||||||||||| ||||| ||    
T  41111856 tcatcaattcatacaattcatccaaaattcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaagaaa-ct 41111954  T
Q  110 aacatcatctttactcatcccatcagaatcatcatcaaaccctaattttcatattattttccaaaactattcaattaggtcaatttcagaaattatagat 209  Q
    |||| | ||||||||||| |||||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  41111955 aacaccgtctttactcattccatcagaatcatcatcaaaccctaactttcatcttatttttcaaaactattcaattaggtcaatttcagaaattatagat 41112054  T
Q  210 tatgattattgagagatggtctcacccttaccttagttttg 250  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  41112055 tatgattattgagagatagtctcacccttaccttagttttg 41112095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 60 - 244
Target Start/End: Complemental strand, 20437211 - 20437024
Alignment:
Q  60 caacagcatggattaagctttcattcttaacattaaattccgagaaaactaacatcatctttactcat-cccatcagaatcatcatcaaaccctaatttt 158  Q
    |||||| || ||||||| ||||||||| ||||||| ||| | | | || |||||| |||  ||| ||| ||| |||||||||||||||||||||||   |    
T  20437211 caacagtatagattaagttttcattctgaacattacattacaacataattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccct 20437112  T
Q  159 catattattttccaaaa-ctattcaattaggtcaattt-cagaaattatagattatgattattgagagatggtctcacccttacctta 244  Q
    ||  |||| |||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  20437111 caatttatcttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacctta 20437024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 193 - 321
Target Start/End: Complemental strand, 20045003 - 20044876
Alignment:
Q  193 tttcagaaattatagattatgattattgagagatggtctcacccttaccttagttttgtaggaagaattaacacagcaaaccagctcctaagtttttccc 292  Q
    |||||||| ||||| |||| ||| |||||  |||  || ||||||||||||||  ||||||||||||||||||||||||| ||||||||||| |||||||    
T  20045003 tttcagaatttatatattaagatcattgaaggataatcccacccttaccttagaattgtaggaagaattaacacagcaaatcagctcctaag-ttttccc 20044905  T
Q  293 ccttgttcttggtttctcttgctttctct 321  Q
    ||||||||||| |||||||||||||||||    
T  20044904 ccttgttcttgttttctcttgctttctct 20044876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 244
Target Start/End: Original strand, 32651545 - 32651627
Alignment:
Q  163 ttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatggtctcacccttacctta 244  Q
    |||||||| | ||| | |||||||| ||||||| ||||||||||| | ||||||||||||||||| |||||||||||||||||    
T  32651545 ttattttcaagaacaactcaattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 32651627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 244
Target Start/End: Original strand, 18712787 - 18712854
Alignment:
Q  178 attcaattaggtcaattt-cagaaattatagattatgattattgagagatggtctcacccttacctta 244  Q
    |||||||||| ||||||| ||||||||||| | ||||||||||||||||| ||||||||| |||||||    
T  18712787 attcaattagatcaattttcagaaattatatactatgattattgagagatagtctcacccatacctta 18712854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 244
Target Start/End: Complemental strand, 19663568 - 19663517
Alignment:
Q  193 tttcagaaattatagattatgattattgagagatggtctcacccttacctta 244  Q
    |||||||||||||| | ||||||||| ||||||| |||||||||||||||||    
T  19663568 tttcagaaattatatactatgattatcgagagatagtctcacccttacctta 19663517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 244
Target Start/End: Original strand, 11158097 - 11158148
Alignment:
Q  193 tttcagaaattatagattatgattattgagagatggtctcacccttacctta 244  Q
    |||||||||||||| |||| ||| |||||||| | |||||||||||||||||    
T  11158097 tttcagaaattatatattaagatcattgagagttagtctcacccttacctta 11158148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 244
Target Start/End: Original strand, 20805325 - 20805376
Alignment:
Q  193 tttcagaaattatagattatgattattgagagatggtctcacccttacctta 244  Q
    |||||||||||||| |||||||| |||||||| | | |||||||||||||||    
T  20805325 tttcagaaattatatattatgatcattgagagttagcctcacccttacctta 20805376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 242
Target Start/End: Complemental strand, 10811834 - 10811785
Alignment:
Q  193 tttcagaaattatagattatgattattgagagatggtctcacccttacct 242  Q
    ||||||||||| || | ||| ||||||||||||| |||||||||||||||    
T  10811834 tttcagaaattctacactattattattgagagatagtctcacccttacct 10811785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 245
Target Start/End: Complemental strand, 20851184 - 20851132
Alignment:
Q  193 tttcagaaattatagattatgattattgagagatggtctcacccttaccttag 245  Q
    |||||||||||||| ||||||| |||||| ||||  || ||||||||||||||    
T  20851184 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 20851132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 245
Target Start/End: Complemental strand, 20857811 - 20857759
Alignment:
Q  193 tttcagaaattatagattatgattattgagagatggtctcacccttaccttag 245  Q
    |||||||||||||| ||||||| |||||| ||||  || ||||||||||||||    
T  20857811 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 20857759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 21706279 - 21706331
Alignment:
Q  193 tttcagaaattatagattatgattattgagagatggtctcacccttaccttag 245  Q
    |||||||||||||| ||||||| |||||| ||||  || ||||||||||||||    
T  21706279 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 21706331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 21710821 - 21710873
Alignment:
Q  193 tttcagaaattatagattatgattattgagagatggtctcacccttaccttag 245  Q
    |||||||||||||| ||||||| |||||| ||||  || ||||||||||||||    
T  21710821 tttcagaaattatatattatgactattgaaagataatcccacccttaccttag 21710873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 101; Significance: 5e-50; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 57 - 250
Target Start/End: Complemental strand, 2087 - 1892
Alignment:
Q  57 cagcaacagcatggattaagctttcattcttaacattaaattccgagaaaactaacatcatctttactcatcccatcagaatcatcatcaaaccctaatt 156  Q
    |||||||| || |||||||| ||||||| | ||||||||||| | ||| || |||||| ||| |||| ||| |||||| |||||||||||||||||||      
T  2087 cagcaacaacaaggattaagttttcattatgaacattaaattacaagagaattaacataatcattacccattccatcaaaatcatcatcaaaccctaacc 1988  T
Q  157 ttcatattattttccaaaactattcaattaggtcaa--tttcagaaattatagattatgattattgagagatggtctcacccttaccttagttttg 250  Q
     ||| |||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  1987 ctcaaattattttccaaaactatacaattaggtcaatttttcagaaattatagattatgattattgagatatagtctcacccttaccttagttttg 1892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 57 - 250
Target Start/End: Complemental strand, 8764 - 8569
Alignment:
Q  57 cagcaacagcatggattaagctttcattcttaacattaaattccgagaaaactaacatcatctttactcatcccatcagaatcatcatcaaaccctaatt 156  Q
    |||||||| || |||||||| ||||||| | ||||||||||| | ||| || |||||| ||| |||| ||| |||||| |||||||||||||||||||      
T  8764 cagcaacaacaaggattaagttttcattttgaacattaaattacaagagaattaacataatcattacccattccatcataatcatcatcaaaccctaacc 8665  T
Q  157 ttcatattattttccaaaactattcaattaggtcaa--tttcagaaattatagattatgattattgagagatggtctcacccttaccttagttttg 250  Q
     ||| |||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  8664 ctcaaattattttccaaaactatacaattaggtcaatttttcagaaattatagattatgattattgagatatagtctcacccttaccttagttttg 8569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 94; Significance: 7e-46; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 57 - 250
Target Start/End: Complemental strand, 12041 - 11845
Alignment:
Q  57 cagcaacagcatggattaagctttcattcttaacattaaattccgagaaaactaacatcatctttactcat--cccatcagaatcatcatcaaaccctaa 154  Q
    |||||||| ||  ||||||| ||||||||| || |||| ||| | ||| || |||||| ||| |||| |||  ||| |||||||||||||||||||||||    
T  12041 cagcaacaacaaagattaagttttcattctgaagattatattacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaa 11942  T
Q  155 ttttcatattattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatggtctcacccttaccttagttttg 250  Q
     | |||  ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  11941 ctctcaatttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttg 11845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 60 - 245
Target Start/End: Original strand, 111554 - 111741
Alignment:
Q  60 caacagcatggattaagctttcattcttaacattaaattccgagaaaactaacatcatctttactcat-cccatcagaatcatcatcaaaccctaatttt 158  Q
    |||||| || ||||||| ||||||||| ||||||| ||| | | | || |||||| |||  ||| ||| ||| |||||||||||||||||||||||   |    
T  111554 caacagtatagattaagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccct 111653  T
Q  159 catattattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatggtctcacccttaccttag 245  Q
    ||  ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  111654 caatttattttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttag 111741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 102 - 250
Target Start/End: Original strand, 202 - 351
Alignment:
Q  102 agaaaactaacatcatctttactcat-cccatcagaatcatcatcaaaccctaattttcatattattttccaaaactattcaattaggtcaatttcagaa 200  Q
    |||||| |||||| ||| |||| ||| ||| |||||||||||||||||||||||   |||  ||||||||||||||||| ||||||||||||||||||||    
T  202 agaaaattaacatgatcattacccattcccctcagaatcatcatcaaaccctaaccctcaatttattttccaaaactatgcaattaggtcaatttcagaa 301  T
Q  201 attatagattatgattattgagagatggtctcacccttaccttagttttg 250  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  302 attatagattatggttattgagagatagtctcacccttaccttagttttg 351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 88; Significance: 3e-42; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 70 - 250
Target Start/End: Original strand, 1056 - 1238
Alignment:
Q  70 gattaagctttcattcttaacattaaattccgagaaaactaacatcatctttactcat--cccatcagaatcatcatcaaaccctaattttcatattatt 167  Q
    ||||||| ||||||||| ||||||| ||| | ||| || |||||| ||| |||| |||  ||| ||| |||| ||||||||||||||   |||  |||||    
T  1056 gattaagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaatttatt 1155  T
Q  168 ttccaaaactattcaattaggtcaatttcagaaattatagattatgattattgagagatggtctcacccttaccttagttttg 250  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  1156 ttccaaaactatgcaattaggtcaatttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttg 1238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 88; Significance: 3e-42; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 70 - 250
Target Start/End: Original strand, 50057 - 50239
Alignment:
Q  70 gattaagctttcattcttaacattaaattccgagaaaactaacatcatctttactcat--cccatcagaatcatcatcaaaccctaattttcatattatt 167  Q
    ||||||| ||||||||| ||||||| ||| | ||| || |||||| ||| |||| |||  ||| ||| |||| ||||||||||||||   |||  |||||    
T  50057 gattaagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaatttatt 50156  T
Q  168 ttccaaaactattcaattaggtcaatttcagaaattatagattatgattattgagagatggtctcacccttaccttagttttg 250  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  50157 ttccaaaactatgcaattaggtcaatttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttg 50239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 87; Significance: 1e-41; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 70 - 250
Target Start/End: Original strand, 111759 - 111943
Alignment:
Q  70 gattaagctttcattcttaacattaaattccgagaaaactaacatcatctttactcat--cccatcagaatcatcatcaaaccctaattttcatattatt 167  Q
    ||||||| ||||||||| ||||||| ||| | ||| || |||||| ||| |||| |||  ||| |||||||||||||||||||||||   |||  ||||     
T  111759 gattaagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttatc 111858  T
Q  168 ttccaaaactattcaattaggtcaattt--cagaaattatagattatgattattgagagatggtctcacccttaccttagttttg 250  Q
    |||||||||||| |||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  111859 ttccaaaactatgcaattaggtcaatttttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttg 111943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 245
Target Start/End: Complemental strand, 91254 - 91202
Alignment:
Q  193 tttcagaaattatagattatgattattgagagatggtctcacccttaccttag 245  Q
    |||||||||| ||| ||||| |||||||| ||||| || ||||||||||||||    
T  91254 tttcagaaatcatatattatcattattgaaagatgatcccacccttaccttag 91202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 245
Target Start/End: Complemental strand, 96980 - 96928
Alignment:
Q  193 tttcagaaattatagattatgattattgagagatggtctcacccttaccttag 245  Q
    |||||||||| ||| ||||| |||||||| ||||| || ||||||||||||||    
T  96980 tttcagaaatcatatattatcattattgaaagatgatcccacccttaccttag 96928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 57 - 250
Target Start/End: Original strand, 11206 - 11402
Alignment:
Q  57 cagcaacagcatggattaagctttcattcttaacattaaattccgagaaaactaacatcatctttactcatcccatc-agaatcatcatcaaaccctaat 155  Q
    ||||||||| |||||||||| ||||||| | ||||| | ||| | | | || |||||| ||| |||||||| || || |||||||||||||||||||||     
T  11206 cagcaacagtatggattaagatttcattttgaacatcacattacaacagaattaacatgatcattactcattccctccagaatcatcatcaaaccctaac 11305  T
Q  156 tttcatat-tattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatggtctcacccttaccttagttttg 250  Q
      |||  | |||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  11306 cctcaattctattttccaaaactaagcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttg 11402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 193 - 321
Target Start/End: Complemental strand, 16116 - 15989
Alignment:
Q  193 tttcagaaattatagattatgattattgagagatggtctcacccttaccttagttttgtaggaagaattaacacagcaaaccagctcctaagtttttccc 292  Q
    |||||||||| ||| ||||| | |||||| ||||  || ||||||||||||||  ||||||||||||||||||||||||| ||||||||||| |||||||    
T  16116 tttcagaaatcatatattataactattgaaagataatcccacccttaccttagaattgtaggaagaattaacacagcaaatcagctcctaag-ttttccc 16018  T
Q  293 ccttgttcttggtttctcttgctttctct 321  Q
    |||||||||||||||||||||||||||||    
T  16017 ccttgttcttggtttctcttgctttctct 15989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 127 - 250
Target Start/End: Original strand, 30793 - 30918
Alignment:
Q  127 tcccatcagaatcatcatcaaaccctaattttca-tattattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagag 224  Q
    |||| ||| ||||||||||||||||||||  ||| | |||  |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||    
T  30793 tcccctcaaaatcatcatcaaaccctaatcctcaattttaccttccaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagag 30892  T
Q  225 atggtctcacccttaccttagttttg 250  Q
    || |||||||||||||||||||||||    
T  30893 atagtctcacccttaccttagttttg 30918  T

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Target: scaffold0025 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 57 - 242
Target Start/End: Complemental strand, 14587 - 14398
Alignment:
Q  57 cagcaacagcatggattaagctttcattcttaacattaaattccgagaaaactaacatcatctttactca--tcccatcagaatcatcatcaaaccctaa 154  Q
    |||||||||||| ||||||| ||||||||  ||||| | ||| | | | || |||||| ||| |||| ||  |||| |||||||||||||||||||||||    
T  14587 cagcaacagcatagattaagttttcattcggaacatcacattacaacagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaa 14488  T
Q  155 ttttcatattattttcc-aaaactattcaattaggtcaa-tttcagaaattatagattatgattattgagagatggtctcacccttacct 242  Q
       |||  |||| |||| |||||||| |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  14487 ccctcaatttatcttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttacct 14398  T

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Target: scaffold0924 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 127 - 250
Target Start/End: Complemental strand, 870 - 745
Alignment:
Q  127 tcccatcagaatcatcatcaaaccctaattttcatattattttccaaaa-ctattcaattaggtcaattt-cagaaattatagattatgattattgagag 224  Q
    |||| ||| |||| ||||||||||||||   |||  ||||||||||||| |||| ||||||||||||||| |||||||||||||||||||||||||||||    
T  870 tcccttcataatcctcatcaaaccctaaccctcaatttattttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagag 771  T
Q  225 atggtctcacccttaccttagttttg 250  Q
    || |||||||||||||||||||||||    
T  770 atagtctcacccttaccttagttttg 745  T

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Target: scaffold0553 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 60 - 245
Target Start/End: Complemental strand, 10383 - 10195
Alignment:
Q  60 caacagcatggattaagctttcattcttaacattaaattccgagaaaactaacatcatctttactcat-cccatcagaatcatcatcaaaccctaatttt 158  Q
    |||||| || ||||||| ||||||||| ||||||| ||| | | | || |||||| |||  ||| ||| ||| |||||||||||||||||||||||        
T  10383 caacagtatagattaagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccca 10284  T
Q  159 catattattttccaaaa-ctattcaattaggtcaattt-cagaaattatagattatgattattgagagatggtctcacccttaccttag 245  Q
    ||  |||| |||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  10283 caatttatcttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtcccacccttaccttag 10195  T

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Target: scaffold0553; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 232 - 321
Target Start/End: Complemental strand, 11096 - 11008
Alignment:
Q  232 cacccttaccttagttttgtaggaagaattaacacagcaaaccagctcctaagtttttcccccttgttcttggtttctcttgctttctct 321  Q
    ||||||||||||||  || |||||||||||||||||||||| ||||||||||| |||||||||||||||||| |||||||||||||||||    
T  11096 cacccttaccttagaattttaggaagaattaacacagcaaatcagctcctaag-ttttcccccttgttcttgttttctcttgctttctct 11008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 60 - 245
Target Start/End: Complemental strand, 1713 - 1525
Alignment:
Q  60 caacagcatggattaagctttcattcttaacattaaattccgagaaaactaacatcatctttactcat-cccatcagaatcatcatcaaaccctaatttt 158  Q
    |||||| || ||||||| ||||||||| ||||||| ||| | | | || |||||| |||  ||| ||| ||| |||||||||||||||||||||||        
T  1713 caacagtatagattaagttttcattctaaacattacattacaacagaattaacatgatcaatacccattcccctcagaatcatcatcaaaccctaaccca 1614  T
Q  159 catattattttccaaaa-ctattcaattaggtcaattt-cagaaattatagattatgattattgagagatggtctcacccttaccttag 245  Q
    ||  |||| |||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  1613 caatttatcttccaaaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtcccacccttaccttag 1525  T

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Target: scaffold0456 (Bit Score: 64; Significance: 6e-28; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 159 - 249
Target Start/End: Original strand, 900 - 991
Alignment:
Q  159 catattattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatggtctcacccttaccttagtttt 249  Q
    |||||||| |||||| ||||| ||||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  900 catattatcttccaagactatgcaattaggtcaattttcagaaactatagattatgattattgagagatagtctcacccttaccttagtttt 991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 159 - 249
Target Start/End: Original strand, 8045 - 8136
Alignment:
Q  159 catattattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatggtctcacccttaccttagtttt 249  Q
    |||||||| |||||| ||||| ||||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  8045 catattatcttccaagactatgcaattaggtcaattttcagaaactatagattatgattattgagagatagtctcacccttaccttagtttt 8136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 181 - 250
Target Start/End: Original strand, 18160 - 18230
Alignment:
Q  181 caattaggtcaattt-cagaaattatagattatgattattgagagatggtctcacccttaccttagttttg 250  Q
    ||||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  18160 caattaggtcaattttcaaaaattatagattatgattattgagagatagtctcacccttaccttagttttg 18230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 163 - 244
Target Start/End: Original strand, 16793 - 16875
Alignment:
Q  163 ttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatggtctcacccttacctta 244  Q
    |||||||| | ||| |||||||||| ||||||| ||||||||||| | ||||||||||||||||| |||||||||||||||||    
T  16793 ttattttcaagaacaattcaattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 16875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 163 - 244
Target Start/End: Original strand, 116869 - 116951
Alignment:
Q  163 ttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatggtctcacccttacctta 244  Q
    |||||||| | ||| |||||||||| ||||||| ||||||||||| | ||||||||||||||||| |||||||||||||||||    
T  116869 ttattttcaagaacaattcaattagatcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 116951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 244
Target Start/End: Complemental strand, 90 - 8
Alignment:
Q  163 ttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatggtctcacccttacctta 244  Q
    |||||||| | ||| |||||||||| ||||||| ||||||||||  |||| |||||||||||||| |||||||||||||||||    
T  90 ttattttcaagaacaattcaattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 8  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 244
Target Start/End: Original strand, 13605 - 13687
Alignment:
Q  163 ttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatggtctcacccttacctta 244  Q
    |||||||| | ||| |||||||||| ||||||| ||||||||||  |||| |||||||||||||| |||||||||||||||||    
T  13605 ttattttcaagaacaattcaattagatcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 13687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 244
Target Start/End: Complemental strand, 102010 - 101928
Alignment:
Q  163 ttattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatggtctcacccttacctta 244  Q
    |||||||| | ||| |||||||||| ||||||| ||| ||||||| | ||||||||||||||||| |||||||||||||||||    
T  102010 ttattttcaagaacaattcaattagatcaattttcaggaattatatactatgattattgagagatagtctcacccttacctta 101928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 193 - 250
Target Start/End: Complemental strand, 40583 - 40526
Alignment:
Q  193 tttcagaaattatagattatgattattgagagatggtctcacccttaccttagttttg 250  Q
    |||||||||||||| | ||||||||||||||||| |||||||||||||||||| ||||    
T  40583 tttcagaaattatatactatgattattgagagatagtctcacccttaccttagatttg 40526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 17647 - 17699
Alignment:
Q  193 tttcagaaattatagattatgattattgagagatggtctcacccttaccttag 245  Q
    |||||||||||||| |||||| |||||||||||| ||||||||||||||||||    
T  17647 tttcagaaattatacattatggttattgagagatagtctcacccttaccttag 17699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 135477 - 135529
Alignment:
Q  193 tttcagaaattatagattatgattattgagagatggtctcacccttaccttag 245  Q
    |||||||||||||| | ||||||||||||||||| ||||||||||||||||||    
T  135477 tttcagaaattatatactatgattattgagagatagtctcacccttaccttag 135529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 193 - 243
Target Start/End: Complemental strand, 22644 - 22594
Alignment:
Q  193 tttcagaaattatagattatgattattgagagatggtctcacccttacctt 243  Q
    |||||||||||||| | ||||||||||||||||| ||||||||||||||||    
T  22644 tttcagaaattatatactatgattattgagagatagtctcacccttacctt 22594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 259
Target Start/End: Original strand, 1450 - 1519
Alignment:
Q  190 caatttcagaaattatagattatgattattgagagatggtctcacccttaccttagttttgtaggaagaa 259  Q
    ||||||||||||||||| |||| ||| |||||||| | ||||||||||||||||| ||||| || |||||    
T  1450 caatttcagaaattatacattaagatcattgagagttagtctcacccttaccttaattttgcagaaagaa 1519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 321
Target Start/End: Original strand, 9339 - 9467
Alignment:
Q  193 tttcagaaattatagattatgattattgagagatggtctcacccttaccttagttttgtaggaagaatta-acacagcaaaccagct-cctaagtttttc 290  Q
    |||||||||||||| ||||||| |||||| ||||  || ||||||||||||||  ||||||  |||   | |||||||||  ||| | |||||||| | |    
T  9339 tttcagaaattatatattatgactattgaaagataatcccacccttaccttagaattgtag--agacagagacacagcaattcagtttcctaagttctcc 9436  T
Q  291 ccccttgttcttggtttctcttgctttctct 321  Q
    |||||||||||||||||||||||||| ||||    
T  9437 ccccttgttcttggtttctcttgcttcctct 9467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 244
Target Start/End: Complemental strand, 34327 - 34276
Alignment:
Q  193 tttcagaaattatagattatgattattgagagatggtctcacccttacctta 244  Q
    |||||||||||||| | ||||||||| ||||||| |||||||||||||||||    
T  34327 tttcagaaattatatactatgattatcgagagatagtctcacccttacctta 34276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 244
Target Start/End: Complemental strand, 15048 - 14997
Alignment:
Q  193 tttcagaaattatagattatgattattgagagatggtctcacccttacctta 244  Q
    |||||||||||||| |||| ||| |||||||| | |||||||||||||||||    
T  15048 tttcagaaattatatattaagatcattgagagttagtctcacccttacctta 14997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 193 - 244
Target Start/End: Original strand, 12301 - 12352
Alignment:
Q  193 tttcagaaattatagattatgattattgagagatggtctcacccttacctta 244  Q
    |||||||||||||| |||||||| |||||||| | | |||||||||||||||    
T  12301 tttcagaaattatatattatgatcattgagagttagcctcacccttacctta 12352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2054 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 250
Target Start/End: Original strand, 686 - 775
Alignment:
Q  163 ttattttccaaaactattcaattaggtcaattt--cagaaattatagattatgattattgagagatggtctcacccttaccttagttttg 250  Q
    |||||||| | ||||||||  |||||| |||||  ||||||||||| |||| ||| ||||| ||||  || |||||||||||||||||||    
T  686 ttattttcaagaactattcttttaggttaatttttcagaaattatatattaagatcattgaaagataatcccacccttaccttagttttg 775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 244
Target Start/End: Original strand, 1331 - 1441
Alignment:
Q  136 aatcatcatcaaaccctaattttca-tattattttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatggtctca 233  Q
    ||||| ||||||||||||||| ||| | ||||  || | ||| ||| |||||| ||||||| || |||||||| || ||||| ||||| |||| ||||||    
T  1331 aatcagcatcaaaccctaattctcagttttatcatcaagaacaatttaattagatcaattttcaaaaattatatatcatgatcattgaaagatagtctca 1430  T
Q  234 cccttacctta 244  Q
    |||||||||||    
T  1431 cccttacctta 1441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 245
Target Start/End: Complemental strand, 5929 - 5857
Alignment:
Q  174 aactattcaattaggtcaattt-cagaaattatagattatgattattgagagatggtctcacccttaccttag 245  Q
    |||||||||||||| | ||||| ||||||||||| ||||| || ||||| ||||  || ||||||||||||||    
T  5929 aactattcaattagattaattttcagaaattatatattataatcattgaaagataatcccacccttaccttag 5857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 172 - 245
Target Start/End: Complemental strand, 13969 - 13894
Alignment:
Q  172 aaaactattcaattaggtcaattt--cagaaattatagattatgattattgagagatggtctcacccttaccttag 245  Q
    |||||||||||||||| | |||||  ||||||||||| ||||| || ||||| ||||  || ||||||||||||||    
T  13969 aaaactattcaattagattaatttttcagaaattatatattataatcattgaaagataatcccacccttaccttag 13894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 1000 - 1052
Alignment:
Q  193 tttcagaaattatagattatgattattgagagatggtctcacccttaccttag 245  Q
    |||||||||| ||| ||||| | |||||||||||| || ||||||||||||||    
T  1000 tttcagaaatcatatattatcactattgagagatgatcccacccttaccttag 1052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 10242 - 10294
Alignment:
Q  193 tttcagaaattatagattatgattattgagagatggtctcacccttaccttag 245  Q
    |||||||||||| | |||||||||||||  ||||  |||||||||||||||||    
T  10242 tttcagaaattacatattatgattattggaagataatctcacccttaccttag 10294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 135441 - 135493
Alignment:
Q  193 tttcagaaattatagattatgattattgagagatggtctcacccttaccttag 245  Q
    |||||||||||||| ||||||| |||||| ||||  |||||| ||||||||||    
T  135441 tttcagaaattatatattatgactattgaaagataatctcacgcttaccttag 135493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 245
Target Start/End: Complemental strand, 493079 - 493028
Alignment:
Q  193 tttcagaaattatagattatgattattgagagatggtctcacccttaccttag 245  Q
    |||||||||||||| |||| ||||||||| ||||  |||||||||||||||||    
T  493079 tttcagaaattatacatta-gattattgaaagataatctcacccttaccttag 493028  T

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