View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15432_high_17 (Length: 321)
Name: NF15432_high_17
Description: NF15432
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15432_high_17 |
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| [»] scaffold0115 (1 HSPs) |
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Alignment Details
Target: scaffold0115 (Bit Score: 266; Significance: 1e-148; HSPs: 1)
Name: scaffold0115
Description:
Target: scaffold0115; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 1 - 314
Target Start/End: Complemental strand, 45840 - 45527
Alignment:
| Q |
1 |
aagagtttcatgacacacctctttcaggacactccagtctccagccaactctatccagaatggccgcatcgtttctttaaccatatgcctataaagatat |
100 |
Q |
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| T |
45840 |
aagagtttcatgacacacctctttcaggacactccagtctccagccaactctagccagaatggccgcatcgtttctttgaccagatgcctataaagatgt |
45741 |
T |
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| Q |
101 |
caaacactgggtccttaggtgcgaaattttccataagagtaagtacatgccaaccaaaaaacaggggttactcaaaccattaccaatccctcaacaagtg |
200 |
Q |
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| T |
45740 |
gaaacattgggtcctcaggtgcgaaatttttcagaagagtaagtaaatgccaaccaagaaacaggggttactcaaaccattaccaatccctcaacaagtg |
45641 |
T |
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| Q |
201 |
tggatagatctatctatggattttataacgcacttaccaagttcctttgggtcatctgtgatcggctttcaaaatatgtctacttcatcgcttttcctac |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
45640 |
tggatagatctatctatggattttataacgcacttaccaagttcctttgggtcatctgtgatcggctttcaaaatatgtctacttcatcgcttttcccac |
45541 |
T |
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| Q |
301 |
aaagttctctgctc |
314 |
Q |
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|||||||||||||| |
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| T |
45540 |
aaagttctctgctc |
45527 |
T |
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