View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF15432_high_23 (Length: 304)
Name: NF15432_high_23
Description: NF15432
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15432_high_23 |
 |  |
|
| [»] scaffold0091 (3 HSPs) |
 |  |
|
| [»] scaffold0218 (2 HSPs) |
 |  |  |
|
| [»] scaffold0063 (2 HSPs) |
 |  |
|
| [»] scaffold0003 (2 HSPs) |
 |  |
|
| [»] chr8 (7 HSPs) |
 |  |
|
| [»] scaffold0061 (1 HSPs) |
 |  |
|
| [»] scaffold1269 (1 HSPs) |
 |  |  |
|
| [»] scaffold1043 (1 HSPs) |
 |  |
|
| [»] chr2 (2 HSPs) |
 |  |
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| [»] chr4 (2 HSPs) |
 |  |
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| [»] scaffold0319 (1 HSPs) |
 |  |  |
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| [»] chr5 (3 HSPs) |
 |  |
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| [»] scaffold0170 (1 HSPs) |
 |  |
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| [»] scaffold0010 (1 HSPs) |
 |  |
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Alignment Details
Target: scaffold0091 (Bit Score: 103; Significance: 3e-51; HSPs: 3)
Name: scaffold0091
Description:
Target: scaffold0091; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 186 - 304
Target Start/End: Complemental strand, 28994 - 28876
Alignment:
| Q |
186 |
gggtggtgtgtaaatatatacatactgactatgagaatgaagacgtataattatgatgatgacttgaatgatggtgtctaatatacattgatgatgagat |
285 |
Q |
| |
|
|||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28994 |
gggtggtgtgtaaatatatatatattgactatgagaatgacgacgtataattatgatgatgacttgaatgatggtgtctaatatacattgatgatgagaa |
28895 |
T |
 |
| Q |
286 |
tgacgatgttgacttatga |
304 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
28894 |
tgacgatgttgacttatga |
28876 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0091; HSP #2
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 9 - 122
Target Start/End: Complemental strand, 29172 - 29058
Alignment:
| Q |
9 |
gagatgaataatgaggaatacataatgtgacgaagagtgatgacgaagatattatatacatgtaatt-aataaatacgatgagaaatgataatgtttata |
107 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
29172 |
gagatgaataatgaggaatccataatgtgacgaagagtgatgacgaagatattatatatatgtaattaaataaatacgatgagaaatgataatgtttata |
29073 |
T |
 |
| Q |
108 |
tgttagtgatgatga |
122 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
29072 |
tgttagtgatgatga |
29058 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0091; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 201 - 304
Target Start/End: Complemental strand, 24782 - 24679
Alignment:
| Q |
201 |
atatacatactgactatgagaatgaagacgtataattatgatgatgacttgaatgatggtgtctaatatacattgatgatgagattgacgatgttgactt |
300 |
Q |
| |
|
||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
24782 |
atatatatattgactatgagaatgacgacgtataattatgatgatgacttgaatgatggtgtctaatatacattgatgatgagaatgacgatgttgactt |
24683 |
T |
 |
| Q |
301 |
atga |
304 |
Q |
| |
|
|||| |
|
|
| T |
24682 |
atga |
24679 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0218 (Bit Score: 99; Significance: 7e-49; HSPs: 2)
Name: scaffold0218
Description:
Target: scaffold0218; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 9 - 122
Target Start/End: Complemental strand, 14492 - 14378
Alignment:
| Q |
9 |
gagatgaataatgaggaatacataatgtgacgaagagtgatgacgaagatattatatacatgtaatt-aataaatacgatgagaaatgataatgtttata |
107 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
14492 |
gagatgaataatgaggaatccataatgtgacgaagagtgatgacgaagatattatatatatgtaattaaataaatacgatgagaaatgataatgtttata |
14393 |
T |
 |
| Q |
108 |
tgttagtgatgatga |
122 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
14392 |
tgttagtgatgatga |
14378 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0218; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 186 - 302
Target Start/End: Complemental strand, 14314 - 14198
Alignment:
| Q |
186 |
gggtggtgtgtaaatatatacatactgactatgagaatgaagacgtataattatgatgatgacttgaatgatggtgtctaatatacattgatgatgagat |
285 |
Q |
| |
|
||||||||||| ||||||| ||| ||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
14314 |
gggtggtgtgtgtatatatatatattgactatgacaatgatgacgtataattatgatgatgacttatatgatggtgtctaatatacattgatgatgagaa |
14215 |
T |
 |
| Q |
286 |
tgacgatgttgacttat |
302 |
Q |
| |
|
|||||||||| |||||| |
|
|
| T |
14214 |
tgacgatgtttacttat |
14198 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 97; Significance: 1e-47; HSPs: 10)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 9 - 120
Target Start/End: Complemental strand, 16642412 - 16642300
Alignment:
| Q |
9 |
gagatgaataatgaggaatacataatgtgacgaagagtgatgacgaagatattatatacatgtaatt-aataaatacgatgagaaatgataatgtttata |
107 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
16642412 |
gagatgaataatgaggaatccataatgtgacgaagagtgatgacgaagatattatatatatgtaattaaataaatacgatgagaaatgataatgtttata |
16642313 |
T |
 |
| Q |
108 |
tgttagtgatgat |
120 |
Q |
| |
|
||||||||||||| |
|
|
| T |
16642312 |
tgttagtgatgat |
16642300 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 9 - 121
Target Start/End: Original strand, 4712800 - 4712913
Alignment:
| Q |
9 |
gagatgaataatgaggaatacataatgtgacgaagagtgatgacgaagatattatatacatgtaatt-aataaatacgatgagaaatgataatgtttata |
107 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
4712800 |
gagatgaataatgaggaatccataatgtgacgaagagtgatgacgaagataatatatatatgtaattaaataaatacgatgagaaatgataatgtttata |
4712899 |
T |
 |
| Q |
108 |
tgttagtgatgatg |
121 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
4712900 |
tgttagtgatgatg |
4712913 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 199 - 304
Target Start/End: Complemental strand, 16642197 - 16642092
Alignment:
| Q |
199 |
atatatacatactgactatgagaatgaagacgtataattatgatgatgacttgaatgatggtgtctaatatacattgatgatgagattgacgatgttgac |
298 |
Q |
| |
|
||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
16642197 |
atatatatatattgactatgagaatgacgacgtataattatgatgatgacttgaatgatggtgtctaatatacattgatgatgagaatgacgatgttgac |
16642098 |
T |
 |
| Q |
299 |
ttatga |
304 |
Q |
| |
|
|||||| |
|
|
| T |
16642097 |
ttatga |
16642092 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 9 - 122
Target Start/End: Original strand, 14062778 - 14062892
Alignment:
| Q |
9 |
gagatgaataatgaggaatacataatgtgacgaagagtgatgacgaagatattatatacatgtaatt-aataaatacgatgagaaatgataatgtttata |
107 |
Q |
| |
|
||||||||||||||||| | |||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
14062778 |
gagatgaataatgaggattccataatgtgacgaagagtgatgacgaagatattatacatatgtaattaaataaatacgatgagaaatgataatgtttata |
14062877 |
T |
 |
| Q |
108 |
tgttagtgatgatga |
122 |
Q |
| |
|
||||||| ||||||| |
|
|
| T |
14062878 |
tgttagttatgatga |
14062892 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 199 - 304
Target Start/End: Original strand, 4712995 - 4713100
Alignment:
| Q |
199 |
atatatacatactgactatgagaatgaagacgtataattatgatgatgacttgaatgatggtgtctaatatacattgatgatgagattgacgatgttgac |
298 |
Q |
| |
|
||||||| ||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
4712995 |
atatatatatattgactatgagaatgacgacgtataattatgatgataacttgaatgatggtgtctaatatacattgatgatgagaatgacgatgttgac |
4713094 |
T |
 |
| Q |
299 |
ttatga |
304 |
Q |
| |
|
|||||| |
|
|
| T |
4713095 |
ttatga |
4713100 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 9 - 122
Target Start/End: Original strand, 14055037 - 14055151
Alignment:
| Q |
9 |
gagatgaataatgaggaatacataatgtgacgaagagtgatgacgaagatattatatacatgtaatt-aataaatacgatgagaaatgataatgtttata |
107 |
Q |
| |
|
||||||||||||||||| | |||||| |||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
14055037 |
gagatgaataatgaggattctataatgcgacgaagagtgatgacgaagatattatacatatgtaattaaataaatacgatgagaaatgataatgtttata |
14055136 |
T |
 |
| Q |
108 |
tgttagtgatgatga |
122 |
Q |
| |
|
|||||||||| |||| |
|
|
| T |
14055137 |
tgttagtgataatga |
14055151 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 200 - 304
Target Start/End: Original strand, 14055221 - 14055325
Alignment:
| Q |
200 |
tatatacatactgactatgagaatgaagacgtataattatgatgatgacttgaatgatggtgtctaatatacattgatgatgagattgacgatgttgact |
299 |
Q |
| |
|
|||||| ||| |||| |||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||| ||| |
|
|
| T |
14055221 |
tatatatatattgacgatgataatgatgacgtataattatgatgatgacttgaatgatgatgtctaatatacattgatgatgagaatgaaaatgtttact |
14055320 |
T |
 |
| Q |
300 |
tatga |
304 |
Q |
| |
|
||||| |
|
|
| T |
14055321 |
tatga |
14055325 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 119
Target Start/End: Original strand, 13926858 - 13926960
Alignment:
| Q |
19 |
atgaggaatacataatgtgacgaagagtgatgacgaa-gatattatatacatgtaattaa-taaatacgatgagaaatgataatgtttatatgttagtga |
116 |
Q |
| |
|
||||||||| |||||||||| ||||||||||||| | ||||||||||| || ||| ||| ||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
13926858 |
atgaggaatccataatgtgatgaagagtgatgacaattgatattatatatatttaaataaataaatacgatgagaaatgataatgtttatattttagtga |
13926957 |
T |
 |
| Q |
117 |
tga |
119 |
Q |
| |
|
||| |
|
|
| T |
13926958 |
tga |
13926960 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 199 - 267
Target Start/End: Original strand, 14062981 - 14063049
Alignment:
| Q |
199 |
atatatacatactgactatgagaatgaagacgtataattatgatgatgacttgaatgatggtgtctaat |
267 |
Q |
| |
|
||||||| ||| |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14062981 |
atatatatatattgacgatgagaatgatgacgtataattatgatgatgacttgaatgatggtgtctaat |
14063049 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 230 - 304
Target Start/End: Original strand, 14481808 - 14481882
Alignment:
| Q |
230 |
gtataattatgatgatgacttgaatgatggtgtctaatatacattgatgatgagattgacgatgttgacttatga |
304 |
Q |
| |
|
|||||||||||||||||| |||||||||| | |||||||||||||||||||||| |||||||||| ||||||| |
|
|
| T |
14481808 |
gtataattatgatgatgatttgaatgatgattcctaatatacattgatgatgagaatgacgatgtttgcttatga |
14481882 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 95; Significance: 2e-46; HSPs: 4)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 9 - 122
Target Start/End: Original strand, 14989375 - 14989489
Alignment:
| Q |
9 |
gagatgaataatgaggaatacataatgtgacgaagagtgatgacgaagatattatatacatgtaatt-aataaatacgatgagaaatgataatgtttata |
107 |
Q |
| |
|
|||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
14989375 |
gagatgaataatgacgaatccataatgtgacgaagagtgatgacgaagatattatatatatgtaattaaataaatacgatgagaaatgataatgtttata |
14989474 |
T |
 |
| Q |
108 |
tgttagtgatgatga |
122 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
14989475 |
tgttagtgatgatga |
14989489 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 9 - 121
Target Start/End: Original strand, 14980263 - 14980376
Alignment:
| Q |
9 |
gagatgaataatgaggaatacataatgtgacgaagagtgatgacgaagatattatatacatgtaatt-aataaatacgatgagaaatgataatgtttata |
107 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
14980263 |
gagatgaataatgaggaatccataatgtgacgaagagtgatgacgaagataatatatatatgtaattaaataaatacgatgagaaatgataatgtttata |
14980362 |
T |
 |
| Q |
108 |
tgttagtgatgatg |
121 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
14980363 |
tgttagtgatgatg |
14980376 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 199 - 304
Target Start/End: Original strand, 14980458 - 14980563
Alignment:
| Q |
199 |
atatatacatactgactatgagaatgaagacgtataattatgatgatgacttgaatgatggtgtctaatatacattgatgatgagattgacgatgttgac |
298 |
Q |
| |
|
||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
14980458 |
atatatatatattgactatgagaatgacgacgtataattatgatgatgacttgaatgatggtgtctaatatacattgatgatgagaatgacgatgttgac |
14980557 |
T |
 |
| Q |
299 |
ttatga |
304 |
Q |
| |
|
|||||| |
|
|
| T |
14980558 |
ttatga |
14980563 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 122
Target Start/End: Original strand, 10906902 - 10906938
Alignment:
| Q |
86 |
atgagaaatgataatgtttatatgttagtgatgatga |
122 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
10906902 |
atgagaaatgataatgtttatattttagtgatgatga |
10906938 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 95; Significance: 2e-46; HSPs: 5)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 9 - 122
Target Start/End: Original strand, 51658662 - 51658776
Alignment:
| Q |
9 |
gagatgaataatgaggaatacataatgtgacgaagagtgatgacgaagatattatatacatgtaatt-aataaatacgatgagaaatgataatgtttata |
107 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| |||||| |
|
|
| T |
51658662 |
gagatgaataatgaggaatccataatgtgacgaagagtgatgacgaagatattatatatatgtaattaaataaatacgatgagaaatgataatatttata |
51658761 |
T |
 |
| Q |
108 |
tgttagtgatgatga |
122 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
51658762 |
tgttagtgatgatga |
51658776 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 16 - 122
Target Start/End: Original strand, 13882243 - 13882350
Alignment:
| Q |
16 |
ataatgaggaatacataatgtgacgaagagtgatgacgaagatattatatacatgtaatt-aataaatacgatgagaaatgataatgtttatatgttagt |
114 |
Q |
| |
|
|||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13882243 |
ataatgaggaatccatattgtgacgaagagtgatgacgaagatattatatatatgtaattaaataaatacgatgagaaatgataatgtttatatgttagt |
13882342 |
T |
 |
| Q |
115 |
gatgatga |
122 |
Q |
| |
|
|||||||| |
|
|
| T |
13882343 |
gatgatga |
13882350 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 199 - 304
Target Start/End: Original strand, 13882462 - 13882567
Alignment:
| Q |
199 |
atatatacatactgactatgagaatgaagacgtataattatgatgatgacttgaatgatggtgtctaatatacattgatgatgagattgacgatgttgac |
298 |
Q |
| |
|
||||||| ||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
13882462 |
atatatatatatagacaatgagaatgacgacgtataattatgatgatgacttgaatgatggtgtctaatatacattgatgatgagaatgacgatgttgac |
13882561 |
T |
 |
| Q |
299 |
ttatga |
304 |
Q |
| |
|
|||||| |
|
|
| T |
13882562 |
ttatga |
13882567 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 202 - 301
Target Start/End: Original strand, 51658854 - 51658953
Alignment:
| Q |
202 |
tatacatactgactatgagaatgaagacgtataattatgatgatgacttgaatgatggtgtctaatatacattgatgatgagattgacgatgttgactta |
301 |
Q |
| |
|
|||| ||| |||| |||||||||| ||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||| |||||||||| ||||| |
|
|
| T |
51658854 |
tatatatattgacgatgagaatgatgacgtataattatgatgatgacttgaacgatgatatctaatatacattgatgatgagaatgacgatgtttactta |
51658953 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 108
Target Start/End: Original strand, 1567069 - 1567166
Alignment:
| Q |
15 |
aataatgaggaat-acataat-gtgacgaagagtgatgacgaa-gatattatatacatgtaattaa-taaatacgatgagaaatgataatgtttatat |
108 |
Q |
| |
|
||||||||||||| | ||||| ||||| |||||||||||||| ||||||||||| |||||| || ||||||||||||||||||| ||| ||||||| |
|
|
| T |
1567069 |
aataatgaggaatcatataattgtgacaaagagtgatgacgattgatattatatatatgtaaacaaataaatacgatgagaaatgacaatatttatat |
1567166 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 94; Significance: 7e-46; HSPs: 8)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 186 - 302
Target Start/End: Complemental strand, 16060449 - 16060335
Alignment:
| Q |
186 |
gggtggtgtgtaaatatatacatactgactatgagaatgaagacgtataattatgatgatgacttgaatgatggtgtctaatatacattgatgatgagat |
285 |
Q |
| |
|
|||||||||||||||||||| || ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16060449 |
gggtggtgtgtaaatatatatat--tgactatgagaatgacgacgtataattatgatgatgacttgaatgatggtgtctaatatacattgatgatgagaa |
16060352 |
T |
 |
| Q |
286 |
tgacgatgttgacttat |
302 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
16060351 |
tgacgatgttgacttat |
16060335 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 9 - 122
Target Start/End: Complemental strand, 48376902 - 48376788
Alignment:
| Q |
9 |
gagatgaataatgaggaatacataatgtgacgaagagtgatgacgaagatattatatacatgtaatt-aataaatacgatgagaaatgataatgtttata |
107 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
48376902 |
gagatgaataatgaggaatctataatgtgacgaagagtgatgacgaagatattatatatatgtaattaaataaatacgatgagaaatgataatgtttata |
48376803 |
T |
 |
| Q |
108 |
tgttagtgatgatga |
122 |
Q |
| |
|
||||| ||||||||| |
|
|
| T |
48376802 |
tgttattgatgatga |
48376788 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 9 - 122
Target Start/End: Complemental strand, 16060627 - 16060513
Alignment:
| Q |
9 |
gagatgaataatgaggaatacataatgtgacgaagagtgatgacgaagatattatatacatgtaatt-aataaatacgatgagaaatgataatgtttata |
107 |
Q |
| |
|
||||||||||||||||||| ||||||||| || |||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||| |
|
|
| T |
16060627 |
gagatgaataatgaggaatctataatgtgatgaggagtgatgacgaagatattatatatatgtaattaaataaatatgatgagaaatgataatgtttata |
16060528 |
T |
 |
| Q |
108 |
tgttagtgatgatga |
122 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
16060527 |
tgttagtgatgatga |
16060513 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 200 - 304
Target Start/End: Complemental strand, 9080269 - 9080165
Alignment:
| Q |
200 |
tatatacatactgactatgagaatgaagacgtataattatgatgatgacttgaatgatggtgtctaatatacattgatgatgagattgacgatgttgact |
299 |
Q |
| |
|
|||||| ||| |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |
|
|
| T |
9080269 |
tatatatatattgacgatgagaatgatgacgtataattatgatgatgacttgaatgatggtgtctaatatacattgatgatgagaatgacgatgtttact |
9080170 |
T |
 |
| Q |
300 |
tatga |
304 |
Q |
| |
|
||||| |
|
|
| T |
9080169 |
tatga |
9080165 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 211 - 304
Target Start/End: Complemental strand, 48376689 - 48376596
Alignment:
| Q |
211 |
tgactatgagaatgaagacgtataattatgatgatgacttgaatgatggtgtctaatatacattgatgatgagattgacgatgttgacttatga |
304 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| |||||||| |
|
|
| T |
48376689 |
tgactatgagaatgatgacgtataattatgatgatgacttaaatgatggtgtctaatatacattgatgatgagaatgacgatgtttacttatga |
48376596 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 211 - 304
Target Start/End: Original strand, 16069015 - 16069108
Alignment:
| Q |
211 |
tgactatgagaatgaagacgtataattatgatgatgacttgaatgatggtgtctaatatacattgatgatgagattgacgatgttgacttatga |
304 |
Q |
| |
|
|||| |||||||||| ||||||||||||||||||||| |||||||||| |||||||||||||||||||| |||| |||||||||| |||||||| |
|
|
| T |
16069015 |
tgacgatgagaatgatgacgtataattatgatgatgatttgaatgatgatgtctaatatacattgatgacgagaatgacgatgtttacttatga |
16069108 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 122
Target Start/End: Original strand, 4531759 - 4531864
Alignment:
| Q |
19 |
atgaggaatacataatgtgacgaagagtgatgacga-agatattatatacatgt-aattaataaatacgatgagaaatgataatgtttatatgttagtga |
116 |
Q |
| |
|
||||||||| |||||||||||||||||||||||| | ||||||||||| |||| ||| ||||||||| ||||||||| |||||| |||||| ||| ||| |
|
|
| T |
4531759 |
atgaggaatccataatgtgacgaagagtgatgacaattgatattatatatatgtaaataaataaatacaatgagaaataataatgcttatattttattga |
4531858 |
T |
 |
| Q |
117 |
tgatga |
122 |
Q |
| |
|
|||||| |
|
|
| T |
4531859 |
tgatga |
4531864 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 86 - 122
Target Start/End: Complemental strand, 9080375 - 9080339
Alignment:
| Q |
86 |
atgagaaatgataatgtttatatgttagtgatgatga |
122 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9080375 |
atgagaaatgataatgtttatatgttagtgatgatga |
9080339 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0063 (Bit Score: 92; Significance: 1e-44; HSPs: 2)
Name: scaffold0063
Description:
Target: scaffold0063; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 186 - 304
Target Start/End: Original strand, 28443 - 28559
Alignment:
| Q |
186 |
gggtggtgtgtaaatatatacatactgactatgagaatgaagacgtataattatgatgatgacttgaatgatggtgtctaatatacattgatgatgagat |
285 |
Q |
| |
|
|||||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
28443 |
gggtggtgtgtaaatatatatat--tgactatgagaatgacgacgtataattatgatgatgaattgaatgatggtgtctaatatacattgatgatgagaa |
28540 |
T |
 |
| Q |
286 |
tgacgatgttgacttatga |
304 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
28541 |
tgacgatgttgacttatga |
28559 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0063; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 28342 - 28379
Alignment:
| Q |
85 |
gatgagaaatgataatgtttatatgttagtgatgatga |
122 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
28342 |
gatgagaaatgatgatgtttatatgttagtgatgatga |
28379 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0003 (Bit Score: 86; Significance: 4e-41; HSPs: 2)
Name: scaffold0003
Description:
Target: scaffold0003; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 199 - 304
Target Start/End: Complemental strand, 130697 - 130592
Alignment:
| Q |
199 |
atatatacatactgactatgagaatgaagacgtataattatgatgatgacttgaatgatggtgtctaatatacattgatgatgagattgacgatgttgac |
298 |
Q |
| |
|
||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |
|
|
| T |
130697 |
atatatatatattgactatgagaatgacgacgtataattatgatgatgacttgaatgatggtgtctaatatacattgatggtgagaatgacgatgttgac |
130598 |
T |
 |
| Q |
299 |
ttatga |
304 |
Q |
| |
|
|||||| |
|
|
| T |
130597 |
ttatga |
130592 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0003; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 49 - 122
Target Start/End: Complemental strand, 130870 - 130796
Alignment:
| Q |
49 |
tgacgaagatattatatacatgtaattaa-taaatacgatgagaaatgataatgtttatatgttagtgatgatga |
122 |
Q |
| |
|
|||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
130870 |
tgacgaagatattatatatatgtaattaaataaatacgatgagaaatgataatgtttatatgttagtgatgatga |
130796 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 81; Significance: 4e-38; HSPs: 7)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 212 - 304
Target Start/End: Complemental strand, 23657699 - 23657607
Alignment:
| Q |
212 |
gactatgagaatgaagacgtataattatgatgatgacttgaatgatggtgtctaatatacattgatgatgagattgacgatgttgacttatga |
304 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |
|
|
| T |
23657699 |
gactatgagaatgacgacgtataattatgatgatgacttgaatgatggtgtctaatatacattgatgatgaaaatgacgatgttgacttatga |
23657607 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 212 - 304
Target Start/End: Complemental strand, 23658474 - 23658382
Alignment:
| Q |
212 |
gactatgagaatgaagacgtataattatgatgatgacttgaatgatggtgtctaatatacattgatgatgagattgacgatgttgacttatga |
304 |
Q |
| |
|
|||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |
|
|
| T |
23658474 |
gactatgagaatgacgacttataattatgatgatgacttgaatgatggtgtctaatatacattgatgatgaaaatgacgatgttgacttatga |
23658382 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 9 - 122
Target Start/End: Complemental strand, 23658649 - 23658527
Alignment:
| Q |
9 |
gagatgaataatgaggaatacataatgtgacgaagagtgatgacgaagatattatataca--------tgtaatt-aataaatacgatgagaaatgataa |
99 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||||||||| |||| |
|
|
| T |
23658649 |
gagatgaataatgaggaatccataatgtgacgaagagtgatgacgaagatattatatatatatgtgtgtgtaattaaataaatacgatgagaaattataa |
23658550 |
T |
 |
| Q |
100 |
tgtttatatgttagtgatgatga |
122 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
23658549 |
tgtttatatgttagtgatgatga |
23658527 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 211 - 304
Target Start/End: Original strand, 17862251 - 17862344
Alignment:
| Q |
211 |
tgactatgagaatgaagacgtataattatgatgatgacttgaatgatggtgtctaatatacattgatgatgagattgacgatgttgacttatga |
304 |
Q |
| |
|
|||| |||||||||| | |||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||| |||||||| |
|
|
| T |
17862251 |
tgacgatgagaatgataaggtataattatgatgatgatttgaatgatgatgtctaatatacattgatgatgagaatgacgatgtttacttatga |
17862344 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 23657884 - 23657827
Alignment:
| Q |
9 |
gagatgaataatgaggaatacataatgtgacgaagagtgatgacgaagatattatata |
66 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23657884 |
gagatgaataatgaggaatccataatgtgacgaagagtgatgacgaagatattatata |
23657827 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 68 - 122
Target Start/End: Complemental strand, 23657807 - 23657752
Alignment:
| Q |
68 |
atgtaattaa-taaatacgatgagaaatgataatgtttatatgttagtgatgatga |
122 |
Q |
| |
|
|||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
23657807 |
atgtaattaaataaatacgatgagaaattataatgtttatatgttagtgatgatga |
23657752 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 54
Target Start/End: Complemental strand, 29293964 - 29293929
Alignment:
| Q |
19 |
atgaggaatacataatgtgacgaagagtgatgacga |
54 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||| |
|
|
| T |
29293964 |
atgaggaatccataatgtgacgaagagtgatgacga |
29293929 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0061 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold0061
Description:
Target: scaffold0061; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 199 - 304
Target Start/End: Original strand, 18097 - 18202
Alignment:
| Q |
199 |
atatatacatactgactatgagaatgaagacgtataattatgatgatgacttgaatgatggtgtctaatatacattgatgatgagattgacgatgttgac |
298 |
Q |
| |
|
||||||| ||| ||||||||||||||| || |||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| || |
|
|
| T |
18097 |
atatatatatattgactatgagaatgacgaagtatgattatgatgatgacttgaatgatggtatctaatatacattgatgatgagaatgacgatgttaac |
18196 |
T |
 |
| Q |
299 |
ttatga |
304 |
Q |
| |
|
|||||| |
|
|
| T |
18197 |
ttatga |
18202 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1269 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold1269
Description:
Target: scaffold1269; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 9 - 100
Target Start/End: Complemental strand, 93 - 1
Alignment:
| Q |
9 |
gagatgaataatgaggaatacataatgtgacgaagagtgatgacgaagatattatatacatgtaatt-aataaatacgatgagaaatgataat |
100 |
Q |
| |
|
||||||||||||||||| | |||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||||| |
|
|
| T |
93 |
gagatgaataatgaggattccataatgtgacgaagagtgatgacgaagatattatacatatgtaattaaataaatacgatgagaaatgataat |
1 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1043 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold1043
Description:
Target: scaffold1043; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 211 - 304
Target Start/End: Original strand, 1432 - 1525
Alignment:
| Q |
211 |
tgactatgagaatgaagacgtataattatgatgatgacttgaatgatggtgtctaatatacattgatgatgagattgacgatgttgacttatga |
304 |
Q |
| |
|
|||| |||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||| |||||||| |
|
|
| T |
1432 |
tgacgatgagaatgataacgtataattatgatgatgatttgaatgatgatgtctaatatacattgatgatgagaatgacgatgtttacttatga |
1525 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 211 - 304
Target Start/End: Complemental strand, 23907839 - 23907746
Alignment:
| Q |
211 |
tgactatgagaatgaagacgtataattatgatgatgacttgaatgatggtgtctaatatacattgatgatgagattgacgatgttgacttatga |
304 |
Q |
| |
|
|||| |||||||||| |||||||| |||||||||| | |||||||||| ||| ||||||||||||||||||||| |||||||||| |||||||| |
|
|
| T |
23907839 |
tgacgatgagaatgatgacgtatatttatgatgataatttgaatgatgatgtataatatacattgatgatgagaatgacgatgtttacttatga |
23907746 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 122
Target Start/End: Original strand, 23656470 - 23656575
Alignment:
| Q |
19 |
atgaggaatacataatgtgacgaagagtgatgacga-agatattatatacatgtaa-ttaataaatacgatgagaaatgataatgtttatatgttagtga |
116 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||| ||||||||||| ||| || | ||||||||| ||||||||||||||| ||||||| ||| ||| |
|
|
| T |
23656470 |
atgaggaatccataatgtgacgaagagtgatgacgattgatattatatatatgaaagtaaataaatacaatgagaaatgataatatttatattttaatga |
23656569 |
T |
 |
| Q |
117 |
tgatga |
122 |
Q |
| |
|
| |||| |
|
|
| T |
23656570 |
taatga |
23656575 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 57; Significance: 8e-24; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 216 - 304
Target Start/End: Original strand, 19728457 - 19728545
Alignment:
| Q |
216 |
atgagaatgaagacgtataattatgatgatgacttgaatgatggtgtctaatatacattgatgatgagattgacgatgttgacttatga |
304 |
Q |
| |
|
|||||||||| | |||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||||||||| |||||||| |
|
|
| T |
19728457 |
atgagaatgataaagtataattatgatgatgatttgaatgatgatgtctaatatacattgatgatgagaacgacgatgtttacttatga |
19728545 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 33 - 102
Target Start/End: Original strand, 3576240 - 3576311
Alignment:
| Q |
33 |
atgtgacgaagagtgatgacga-agatattatatacatgta-attaataaatacgatgagaaatgataatgt |
102 |
Q |
| |
|
|||||||||||||||||||||| ||| ||||||| ||||| || |||||||||||||||| ||||| |||| |
|
|
| T |
3576240 |
atgtgacgaagagtgatgacgattgattttatataaatgtatataaataaatacgatgagagatgatgatgt |
3576311 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0319 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0319
Description:
Target: scaffold0319; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 13570 - 13638
Alignment:
| Q |
9 |
gagatgaataatgaggaatacataatgtgacgaagagtgatgacgaagatattatatacatgtaattaa |
77 |
Q |
| |
|
||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||| |||||||||| |
|
|
| T |
13570 |
gagatgaataatgaggaatccatgatgtgacaaagagtgatgacgaagatattatatatatgtaattaa |
13638 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 53; Significance: 2e-21; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 216 - 304
Target Start/End: Original strand, 24832209 - 24832297
Alignment:
| Q |
216 |
atgagaatgaagacgtataattatgatgatgacttgaatgatggtgtctaatatacattgatgatgagattgacgatgttgacttatga |
304 |
Q |
| |
|
|||||||||| || |||||||||||||||||| |||||||||| | |||||||||||||||||||||| |||||||||| ||||||| |
|
|
| T |
24832209 |
atgagaatgatgatgtataattatgatgatgatttgaatgatgattcctaatatacattgatgatgagaatgacgatgtttgcttatga |
24832297 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 211 - 268
Target Start/End: Original strand, 25756788 - 25756845
Alignment:
| Q |
211 |
tgactatgagaatgaagacgtataattatgatgatgacttgaatgatggtgtctaata |
268 |
Q |
| |
|
|||| |||||||||| ||| ||||||||||||||||| |||||||||| |||| |||| |
|
|
| T |
25756788 |
tgacgatgagaatgatgacttataattatgatgatgatttgaatgatgatgtcaaata |
25756845 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 211 - 268
Target Start/End: Complemental strand, 25791013 - 25790956
Alignment:
| Q |
211 |
tgactatgagaatgaagacgtataattatgatgatgacttgaatgatggtgtctaata |
268 |
Q |
| |
|
|||| |||||||||| ||| ||||||||||||||||| |||||||||| |||| |||| |
|
|
| T |
25791013 |
tgacgatgagaatgatgacttataattatgatgatgatttgaatgatgatgtcgaata |
25790956 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0170 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0170
Description:
Target: scaffold0170; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 211 - 304
Target Start/End: Complemental strand, 17301 - 17208
Alignment:
| Q |
211 |
tgactatgagaatgaagacgtataattatgatgatgacttgaatgatggtgtctaatatacattgatgatgagattgacgatgttgacttatga |
304 |
Q |
| |
|
|||| |||||||||| | |||||| |||||||||| | |||||||||| ||| ||||||||||||||||||||| ||||||||| |||||||| |
|
|
| T |
17301 |
tgacgatgagaatgatggcgtatatttatgatgataatttgaatgatgatgtataatatacattgatgatgagaacgacgatgtttacttatga |
17208 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0010 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0010
Description:
Target: scaffold0010; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 232 - 304
Target Start/End: Complemental strand, 142273 - 142201
Alignment:
| Q |
232 |
ataattatgatgatgacttgaatgatggtgtctaatatacattgatgatgagattgacgatgttgacttatga |
304 |
Q |
| |
|
|||||||||||||||| || ||||||| |||||||| |||||||||||||||| |||||||||| |||||||| |
|
|
| T |
142273 |
ataattatgatgatgatttaaatgatgatgtctaatttacattgatgatgagaatgacgatgtttacttatga |
142201 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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