View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15432_high_9 (Length: 349)
Name: NF15432_high_9
Description: NF15432
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15432_high_9 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 311; Significance: 1e-175; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 23 - 349
Target Start/End: Complemental strand, 5942008 - 5941682
Alignment:
| Q |
23 |
catcatcagtttcaaataaagtggtgtacattaaagctaatgttagttttaatatgtacaaaactacaagaaacgtaacctatcaatgttggtccactat |
122 |
Q |
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| T |
5942008 |
catcatcagtttcaaataaagtggtgtacattaaagctaatgttggttttaatatgtacaaaactacaagaaatgtaacctatcaatgttggtccactat |
5941909 |
T |
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| Q |
123 |
tattgtatggtcaatttaatattttggagacagtgttataaacaatttttattgatgttataatgtattgtaccggacgaactatcttttcctttgtata |
222 |
Q |
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| T |
5941908 |
tattgtatggtcaatttaatattttggagacagtgttataaacaatttttattgatgttataatgtattgtaccggacgaattatcttttcctttgtata |
5941809 |
T |
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| Q |
223 |
ttagggtaacataaataagaagttgttgtaatgagttaattttctcttatttctgttctcaattttctcttatttaatcctcacctgccttaatcattca |
322 |
Q |
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| T |
5941808 |
ttagggtaacataaataaggagttgttgtaatgagttaattttctcttatttctgttctcaattttctcttatttaatcctcacctgccttaatcattca |
5941709 |
T |
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| Q |
323 |
aattattttattaatcaatgttatggt |
349 |
Q |
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| T |
5941708 |
aattattttattaatcaatgttatggt |
5941682 |
T |
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