View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15434_high_20 (Length: 302)
Name: NF15434_high_20
Description: NF15434
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15434_high_20 |
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Alignment Details
Target: chr1 (Bit Score: 270; Significance: 1e-151; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 21 - 294
Target Start/End: Complemental strand, 11393566 - 11393293
Alignment:
| Q |
21 |
tttcttaacatttcctttaaaaatttatattttttaggtttgttgcatcgaaatttgaagaaatcttcgtcaaacatgcacatacacatccaaatgcttt |
120 |
Q |
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| T |
11393566 |
tttcttaacatttcctttaaaaatttatattttttaggtttgttgcatcgaaatttgaagaaattttcgtcaaacatgcacatacacatccaaatgcttt |
11393467 |
T |
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| Q |
121 |
aacatatgatgagctaaatgagttgataaagacaaatagagagcctaaagatgtcaaaggaaggttagttcttgatttctatatacgatgcgcatggaat |
220 |
Q |
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| T |
11393466 |
aacatatgatgagctaaatgagttgataaagacaaatagagagcctaaagatgtcaaaggaaggttagttcttgatttctatatacgatgcgcatggaat |
11393367 |
T |
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| Q |
221 |
aacatttcttagtaataattaaatttattttccctattaattaaaaaataatagccagtaattaatactcctat |
294 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11393366 |
aacatttcttagtaataattaaatttattttccctattaattaaaaaataatagccagtaattaatactcctat |
11393293 |
T |
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