View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15434_high_3 (Length: 717)

Name: NF15434_high_3
Description: NF15434
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15434_high_3
NF15434_high_3
[»] chr1 (95 HSPs)
chr1 (18-464)||(7989073-7989525)
chr1 (469-717)||(52134216-52134465)
chr1 (467-717)||(4716466-4716717)
chr1 (469-717)||(33442594-33442843)
chr1 (467-717)||(31514316-31514567)
chr1 (468-717)||(24905166-24905416)
chr1 (467-714)||(28011514-28011767)
chr1 (510-716)||(6367742-6367948)
chr1 (510-706)||(183263-183459)
chr1 (510-717)||(34464491-34464698)
chr1 (510-717)||(26024571-26024778)
chr1 (559-717)||(1841638-1841796)
chr1 (559-717)||(13914159-13914317)
chr1 (559-717)||(14879150-14879308)
chr1 (559-717)||(37578283-37578441)
chr1 (561-707)||(43759011-43759157)
chr1 (510-717)||(47999165-47999372)
chr1 (559-717)||(23209452-23209610)
chr1 (559-717)||(30711506-30711664)
chr1 (559-717)||(35152522-35152680)
chr1 (559-717)||(41098912-41099070)
chr1 (559-717)||(1103640-1103798)
chr1 (559-717)||(49722906-49723063)
chr1 (559-708)||(48779307-48779456)
chr1 (559-703)||(7821147-7821291)
chr1 (559-717)||(17661942-17662099)
chr1 (559-707)||(36694373-36694521)
chr1 (559-707)||(36710474-36710622)
chr1 (559-702)||(32917454-32917597)
chr1 (559-717)||(40210461-40210619)
chr1 (559-717)||(40772652-40772809)
chr1 (559-717)||(19017720-19017878)
chr1 (559-717)||(19323071-19323229)
chr1 (591-705)||(19515976-19516090)
chr1 (471-605)||(33442854-33442989)
chr1 (472-605)||(31514577-31514711)
chr1 (468-605)||(52134067-52134205)
chr1 (551-717)||(42248652-42248816)
chr1 (491-634)||(7820976-7821120)
chr1 (510-656)||(6367604-6367750)
chr1 (627-717)||(24009700-24009790)
chr1 (472-575)||(4716758-4716861)
chr1 (559-656)||(4960631-4960728)
chr1 (467-608)||(28324803-28324944)
chr1 (468-608)||(40714443-40714584)
chr1 (469-604)||(49955347-49955483)
chr1 (627-717)||(10304048-10304138)
chr1 (510-656)||(34464689-34464835)
chr1 (522-656)||(37578432-37578566)
chr1 (522-656)||(40210610-40210744)
chr1 (510-656)||(41098775-41098921)
chr1 (559-656)||(19322983-19323080)
chr1 (559-656)||(30711418-30711515)
chr1 (468-600)||(37929417-37929550)
chr1 (510-659)||(46163072-46163221)
chr1 (522-662)||(24009775-24009915)
chr1 (653-717)||(25648032-25648096)
chr1 (517-656)||(1103510-1103649)
chr1 (510-605)||(28011405-28011500)
chr1 (647-702)||(46163224-46163279)
chr1 (627-717)||(4960719-4960812)
chr1 (510-656)||(13914308-13914453)
chr1 (510-656)||(17662090-17662236)
chr1 (510-656)||(19017869-19018015)
chr1 (510-656)||(32917302-32917448)
chr1 (468-608)||(40714729-40714870)
chr1 (469-608)||(17188954-17189094)
chr1 (468-599)||(20760800-20760932)
chr1 (510-605)||(24905427-24905521)
chr1 (522-648)||(43758876-43759002)
chr1 (468-608)||(31050949-31051090)
chr1 (476-608)||(35040900-35041033)
chr1 (468-608)||(49955633-49955774)
chr1 (510-656)||(1841501-1841647)
chr1 (467-608)||(8898515-8898657)
chr1 (467-608)||(8898803-8898945)
chr1 (522-656)||(14879025-14879159)
chr1 (510-656)||(35152385-35152531)
chr1 (559-656)||(42248564-42248661)
chr1 (468-608)||(45750128-45750269)
chr1 (591-656)||(48779240-48779305)
chr1 (467-608)||(45749840-45749982)
chr1 (468-600)||(12905953-12906086)
chr1 (469-572)||(17189173-17189277)
chr1 (466-608)||(31058343-31058486)
chr1 (559-608)||(7371381-7371430)
chr1 (559-608)||(35038546-35038595)
chr1 (510-605)||(183482-183577)
chr1 (510-605)||(25647926-25648021)
chr1 (469-575)||(30326496-30326603)
chr1 (468-582)||(32558419-32558534)
chr1 (510-580)||(40772549-40772619)
chr1 (559-604)||(4960801-4960846)
chr1 (510-575)||(36694569-36694634)
chr1 (510-575)||(36710670-36710735)
[»] chr4 (110 HSPs)
chr4 (472-717)||(9144769-9145015)
chr4 (467-717)||(34837072-34837323)
chr4 (469-717)||(38012318-38012567)
chr4 (468-717)||(42738030-42738280)
chr4 (468-717)||(32950290-32950540)
chr4 (469-714)||(9400519-9400765)
chr4 (469-717)||(4982726-4982975)
chr4 (491-714)||(33247296-33247519)
chr4 (467-717)||(22566947-22567185)
chr4 (477-717)||(27934680-27934907)
chr4 (510-717)||(49879249-49879456)
chr4 (510-717)||(44967111-44967318)
chr4 (559-717)||(17356016-17356174)
chr4 (559-717)||(7451982-7452140)
chr4 (559-717)||(24711259-24711417)
chr4 (559-717)||(34765471-34765629)
chr4 (510-716)||(46661094-46661300)
chr4 (560-717)||(23613457-23613614)
chr4 (510-707)||(37248394-37248591)
chr4 (510-717)||(43155571-43155776)
chr4 (510-717)||(50418710-50418917)
chr4 (468-602)||(51203608-51203743)
chr4 (559-717)||(16005986-16006143)
chr4 (559-717)||(35028089-35028247)
chr4 (559-717)||(37976244-37976402)
chr4 (559-707)||(53702001-53702149)
chr4 (559-717)||(36008935-36009093)
chr4 (545-717)||(18831497-18831668)
chr4 (559-707)||(53129597-53129745)
chr4 (559-698)||(14801934-14802072)
chr4 (563-717)||(15507768-15507922)
chr4 (559-707)||(52909442-52909590)
chr4 (467-605)||(42738291-42738430)
chr4 (510-717)||(51692698-51692905)
chr4 (571-717)||(24411537-24411683)
chr4 (559-707)||(54086786-54086934)
chr4 (467-605)||(9145026-9145165)
chr4 (467-575)||(32950140-32950249)
chr4 (468-605)||(34837334-34837472)
chr4 (469-575)||(38012170-38012277)
chr4 (559-717)||(35508332-35508489)
chr4 (467-608)||(54858558-54858700)
chr4 (510-656)||(52909295-52909441)
chr4 (522-656)||(14801790-14801924)
chr4 (467-589)||(27149301-27149423)
chr4 (642-707)||(13058195-13058260)
chr4 (510-656)||(24411400-24411546)
chr4 (467-608)||(27069196-27069338)
chr4 (468-608)||(27068909-27069050)
chr4 (468-608)||(52573227-52573368)
chr4 (469-604)||(10408179-10408315)
chr4 (472-602)||(6237114-6237245)
chr4 (467-605)||(27934530-27934669)
chr4 (522-656)||(34765620-34765754)
chr4 (471-575)||(9400809-9400914)
chr4 (491-656)||(15507913-15508078)
chr4 (510-662)||(54086929-54087081)
chr4 (521-648)||(53701865-53701992)
chr4 (466-603)||(3032579-3032717)
chr4 (510-620)||(13058258-13058368)
chr4 (491-608)||(45463359-45463477)
chr4 (467-608)||(54858846-54858988)
chr4 (591-656)||(35028238-35028303)
chr4 (469-608)||(10407889-10408029)
chr4 (471-608)||(45463075-45463213)
chr4 (469-605)||(4982986-4983123)
chr4 (644-717)||(5369095-5369168)
chr4 (476-600)||(5818069-5818194)
chr4 (510-575)||(22566841-22566906)
chr4 (510-575)||(33247563-33247628)
chr4 (591-656)||(35508480-35508545)
chr4 (468-627)||(16605601-16605761)
chr4 (518-656)||(37976393-37976531)
chr4 (467-608)||(52573514-52573656)
chr4 (468-608)||(27891583-27891724)
chr4 (467-598)||(22987147-22987279)
chr4 (467-608)||(50503823-50503965)
chr4 (521-627)||(56014778-56014884)
chr4 (559-624)||(8439496-8439561)
chr4 (511-608)||(9731498-9731595)
chr4 (559-624)||(30642418-30642483)
chr4 (476-608)||(39701195-39701328)
chr4 (468-608)||(50504111-50504252)
chr4 (492-608)||(50750910-50751027)
chr4 (591-648)||(53129754-53129811)
chr4 (472-580)||(6236834-6236942)
chr4 (562-656)||(17356165-17356256)
chr4 (467-598)||(22717937-22718069)
chr4 (548-624)||(56015919-56015995)
chr4 (476-597)||(11523956-11524078)
chr4 (510-608)||(22923180-22923278)
chr4 (510-608)||(22927833-22927931)
chr4 (510-608)||(22984112-22984210)
chr4 (510-608)||(22997700-22997798)
chr4 (510-580)||(44967354-44967424)
chr4 (510-627)||(24349716-24349833)
chr4 (559-620)||(39539194-39539255)
chr4 (558-627)||(40388375-40388444)
chr4 (468-572)||(50751822-50751926)
chr4 (559-604)||(51859498-51859543)
chr4 (468-608)||(51859692-51859833)
chr4 (551-599)||(1178126-1178174)
chr4 (510-605)||(5368989-5369084)
chr4 (510-605)||(43155787-43155882)
chr4 (560-627)||(55866201-55866268)
chr4 (510-580)||(7451876-7451946)
chr4 (495-608)||(22718225-22718339)
chr4 (495-608)||(22986877-22986991)
chr4 (510-608)||(39667062-39667160)
chr4 (510-575)||(37248278-37248343)
[»] chr2 (59 HSPs)
chr2 (467-717)||(1695738-1695989)
chr2 (467-717)||(33062048-33062299)
chr2 (468-717)||(13995672-13995922)
chr2 (472-717)||(41248562-41248808)
chr2 (468-717)||(33739851-33740101)
chr2 (468-717)||(14900495-14900732)
chr2 (545-717)||(15848267-15848439)
chr2 (559-717)||(6658026-6658184)
chr2 (559-717)||(11163145-11163303)
chr2 (559-717)||(16099203-16099361)
chr2 (551-717)||(10712902-10713068)
chr2 (510-704)||(37895389-37895583)
chr2 (559-717)||(39498458-39498616)
chr2 (559-705)||(39423706-39423852)
chr2 (562-707)||(22051088-22051233)
chr2 (559-716)||(36479898-36480055)
chr2 (562-717)||(2318337-2318492)
chr2 (467-605)||(33739701-33739840)
chr2 (467-605)||(33062310-33062449)
chr2 (510-717)||(36755272-36755474)
chr2 (468-605)||(13995933-13996071)
chr2 (468-605)||(41248819-41248957)
chr2 (559-666)||(34448025-34448132)
chr2 (475-580)||(1696025-1696131)
chr2 (627-717)||(44713920-44714010)
chr2 (627-717)||(36382340-36382430)
chr2 (467-608)||(8710754-8710896)
chr2 (510-656)||(15848130-15848276)
chr2 (510-656)||(44714001-44714147)
chr2 (510-656)||(36382203-36382349)
chr2 (627-717)||(45556260-45556350)
chr2 (559-656)||(37895587-37895684)
chr2 (469-608)||(28226030-28226170)
chr2 (470-608)||(11830365-11830504)
chr2 (467-608)||(15604337-15604479)
chr2 (467-608)||(15604625-15604767)
chr2 (510-656)||(39423557-39423703)
chr2 (522-656)||(2318212-2318346)
chr2 (591-656)||(10712846-10712911)
chr2 (591-656)||(34447935-34448000)
chr2 (488-656)||(36479737-36479906)
chr2 (591-656)||(36755216-36755281)
chr2 (559-633)||(9076330-9076404)
chr2 (476-608)||(8342194-8342327)
chr2 (510-615)||(13692501-13692606)
chr2 (467-605)||(14900743-14900880)
chr2 (492-608)||(39936535-39936651)
chr2 (467-608)||(8342465-8342607)
chr2 (627-700)||(17266523-17266596)
chr2 (491-605)||(16099077-16099192)
chr2 (494-608)||(41588344-41588459)
chr2 (510-580)||(45556154-45556224)
chr2 (551-604)||(36382419-36382472)
chr2 (559-604)||(44713886-44713931)
chr2 (559-627)||(3653349-3653417)
chr2 (592-656)||(22051234-22051298)
chr2 (559-626)||(25231118-25231185)
chr2 (510-580)||(11163339-11163409)
chr2 (531-624)||(6848006-6848099)
[»] chr5 (86 HSPs)
chr5 (469-717)||(31482402-31482651)
chr5 (467-717)||(1506115-1506366)
chr5 (468-713)||(297013-297259)
chr5 (472-717)||(6757868-6758114)
chr5 (465-717)||(41930664-41930917)
chr5 (510-717)||(3528915-3529122)
chr5 (559-717)||(6301722-6301880)
chr5 (545-717)||(38475110-38475282)
chr5 (562-717)||(28770963-28771118)
chr5 (559-717)||(6150599-6150757)
chr5 (559-717)||(32242421-32242579)
chr5 (559-707)||(16156946-16157094)
chr5 (510-717)||(186598-186805)
chr5 (559-717)||(8322583-8322741)
chr5 (559-717)||(19517786-19517944)
chr5 (559-717)||(28269513-28269671)
chr5 (560-705)||(5024111-5024256)
chr5 (559-707)||(14194514-14194662)
chr5 (559-707)||(19892399-19892547)
chr5 (510-717)||(21265185-21265392)
chr5 (491-717)||(39453479-39453705)
chr5 (559-717)||(17202578-17202736)
chr5 (559-717)||(27587296-27587452)
chr5 (559-717)||(16083122-16083280)
chr5 (559-717)||(18670344-18670502)
chr5 (510-717)||(11761897-11762103)
chr5 (559-717)||(29646453-29646611)
chr5 (559-699)||(11047634-11047774)
chr5 (559-717)||(13362318-13362477)
chr5 (559-717)||(5994068-5994226)
chr5 (559-694)||(38442269-38442404)
chr5 (559-717)||(20814226-20814384)
chr5 (466-580)||(31482687-31482802)
chr5 (468-605)||(1505966-1506104)
chr5 (559-717)||(10684118-10684275)
chr5 (466-605)||(297274-297414)
chr5 (559-680)||(35920319-35920440)
chr5 (627-717)||(24547315-24547405)
chr5 (578-707)||(18247273-18247401)
chr5 (627-717)||(35512327-35512417)
chr5 (559-656)||(6301634-6301731)
chr5 (627-717)||(27937178-27937268)
chr5 (627-717)||(13963043-13963132)
chr5 (559-656)||(43159054-43159151)
chr5 (467-605)||(6758125-6758264)
chr5 (510-656)||(5993931-5994077)
chr5 (510-656)||(13962906-13963052)
chr5 (510-656)||(19892548-19892694)
chr5 (510-656)||(39453342-39453488)
chr5 (510-656)||(17202441-17202587)
chr5 (510-656)||(35512190-35512336)
chr5 (591-667)||(12904877-12904953)
chr5 (467-605)||(41930514-41930653)
chr5 (491-656)||(11047460-11047625)
chr5 (510-656)||(13362468-13362614)
chr5 (522-648)||(14194671-14194797)
chr5 (510-656)||(16157095-16157241)
chr5 (518-656)||(32242292-32242430)
chr5 (522-656)||(38442122-38442256)
chr5 (468-600)||(17544342-17544475)
chr5 (507-656)||(29646602-29646751)
chr5 (469-608)||(8875449-8875589)
chr5 (522-661)||(5024253-5024392)
chr5 (593-656)||(27937259-27937322)
chr5 (467-608)||(33871624-33871766)
chr5 (559-656)||(186510-186607)
chr5 (591-656)||(10684062-10684127)
chr5 (469-608)||(33871339-33871479)
chr5 (510-600)||(17544090-17544180)
chr5 (510-656)||(20814375-20814521)
chr5 (591-656)||(18247207-18247272)
chr5 (469-608)||(20152781-20152921)
chr5 (522-613)||(5255072-5255162)
chr5 (559-626)||(11740778-11740845)
chr5 (510-653)||(20840575-20840718)
chr5 (559-656)||(8322495-8322592)
chr5 (468-608)||(20153204-20153342)
chr5 (510-580)||(11761791-11761861)
chr5 (591-656)||(4700351-4700416)
chr5 (591-656)||(21265383-21265448)
chr5 (510-605)||(27587190-27587285)
chr5 (510-580)||(35920500-35920570)
chr5 (510-580)||(42063296-42063366)
chr5 (559-604)||(13963121-13963166)
chr5 (559-608)||(21287834-21287883)
chr5 (559-604)||(24547281-24547326)
[»] chr8 (83 HSPs)
chr8 (472-717)||(44406860-44407106)
chr8 (467-717)||(40775648-40775899)
chr8 (467-717)||(38845297-38845548)
chr8 (467-717)||(2266640-2266891)
chr8 (467-717)||(3041454-3041705)
chr8 (468-717)||(11674842-11675092)
chr8 (467-717)||(36325382-36325633)
chr8 (559-717)||(1425144-1425302)
chr8 (559-717)||(12199041-12199199)
chr8 (559-717)||(12443469-12443627)
chr8 (559-712)||(13186243-13186396)
chr8 (559-717)||(38955851-38956009)
chr8 (559-702)||(23663636-23663779)
chr8 (510-717)||(22915431-22915638)
chr8 (559-697)||(36928675-36928813)
chr8 (559-717)||(31608604-31608762)
chr8 (559-717)||(35756761-35756919)
chr8 (559-717)||(40318055-40318213)
chr8 (559-707)||(4405753-4405901)
chr8 (468-605)||(38845559-38845697)
chr8 (469-605)||(40775910-40776047)
chr8 (559-717)||(4994748-4994906)
chr8 (467-605)||(2266490-2266629)
chr8 (468-605)||(3041716-3041854)
chr8 (469-605)||(44407117-44407254)
chr8 (468-580)||(35449894-35450007)
chr8 (468-599)||(23505051-23505183)
chr8 (468-599)||(23507722-23507854)
chr8 (559-699)||(34685455-34685595)
chr8 (627-717)||(23698434-23698524)
chr8 (491-661)||(16388761-16388932)
chr8 (627-707)||(8316778-8316858)
chr8 (627-703)||(12273043-12273119)
chr8 (591-707)||(31873017-31873134)
chr8 (522-662)||(36928530-36928670)
chr8 (467-608)||(15230217-15230359)
chr8 (627-717)||(39071855-39071945)
chr8 (627-700)||(38862793-38862866)
chr8 (627-705)||(16388686-16388764)
chr8 (510-656)||(39071718-39071864)
chr8 (468-580)||(11674694-11674807)
chr8 (522-655)||(13186114-13186247)
chr8 (468-608)||(35634385-35634526)
chr8 (469-608)||(44664508-44664648)
chr8 (627-717)||(36186226-36186316)
chr8 (510-656)||(40318204-40318350)
chr8 (476-608)||(10445621-10445754)
chr8 (560-656)||(31608753-31608849)
chr8 (467-605)||(36325232-36325371)
chr8 (467-608)||(37542222-37542364)
chr8 (491-656)||(4994897-4995062)
chr8 (468-599)||(234035-234167)
chr8 (468-599)||(710446-710578)
chr8 (468-599)||(747658-747790)
chr8 (468-599)||(871553-871685)
chr8 (469-599)||(15229931-15230062)
chr8 (530-656)||(35756644-35756770)
chr8 (471-608)||(8997975-8998113)
chr8 (491-608)||(25124585-25124703)
chr8 (467-608)||(41353859-41354001)
chr8 (491-608)||(42945400-42945518)
chr8 (471-608)||(44664794-44664932)
chr8 (510-639)||(4405917-4406046)
chr8 (512-608)||(42945158-42945254)
chr8 (468-599)||(7983427-7983559)
chr8 (524-656)||(36186307-36186439)
chr8 (469-608)||(25124849-25124989)
chr8 (510-604)||(12272960-12273054)
chr8 (591-656)||(31873141-31873204)
chr8 (476-608)||(6471697-6471830)
chr8 (559-627)||(8747533-8747601)
chr8 (522-599)||(6471985-6472062)
chr8 (559-604)||(8316744-8316789)
chr8 (559-608)||(34061616-34061665)
chr8 (559-604)||(38862855-38862900)
chr8 (559-604)||(39071934-39071979)
chr8 (559-627)||(9337117-9337185)
chr8 (559-626)||(7295197-7295264)
chr8 (476-546)||(8997863-8997934)
chr8 (494-608)||(37542511-37542626)
chr8 (510-604)||(23698351-23698445)
chr8 (510-580)||(23698560-23698630)
chr8 (494-599)||(41353599-41353705)
[»] chr3 (77 HSPs)
chr3 (472-717)||(54466571-54466817)
chr3 (472-717)||(8041764-8042010)
chr3 (468-717)||(36314297-36314547)
chr3 (468-717)||(48322376-48322626)
chr3 (476-706)||(10770497-10770728)
chr3 (510-716)||(19740965-19741171)
chr3 (563-717)||(43384462-43384616)
chr3 (559-707)||(36417877-36418025)
chr3 (19-332)||(5031439-5031776)
chr3 (559-717)||(46474960-46475118)
chr3 (559-717)||(55052370-55052528)
chr3 (510-717)||(23458021-23458228)
chr3 (469-604)||(47921466-47921602)
chr3 (468-605)||(8041615-8041753)
chr3 (559-717)||(33689472-33689628)
chr3 (559-717)||(9294049-9294207)
chr3 (472-605)||(54466426-54466560)
chr3 (545-697)||(53756923-53757074)
chr3 (615-717)||(40033637-40033739)
chr3 (627-717)||(2796327-2796417)
chr3 (627-707)||(40758333-40758413)
chr3 (467-608)||(37778559-37778701)
chr3 (627-717)||(42342944-42343034)
chr3 (627-717)||(51994076-51994166)
chr3 (627-707)||(26463757-26463837)
chr3 (467-608)||(3469198-3469340)
chr3 (510-656)||(9294198-9294344)
chr3 (467-608)||(40788706-40788848)
chr3 (468-605)||(48322637-48322775)
chr3 (469-605)||(36314558-36314695)
chr3 (489-656)||(33689619-33689787)
chr3 (466-608)||(29118824-29118967)
chr3 (476-605)||(10770751-10770881)
chr3 (510-656)||(23458219-23458365)
chr3 (491-608)||(29685963-29686081)
chr3 (467-608)||(32306422-32306564)
chr3 (491-608)||(35643873-35643991)
chr3 (559-656)||(40758235-40758332)
chr3 (510-655)||(43384325-43384470)
chr3 (469-598)||(10294567-10294697)
chr3 (467-604)||(47551491-47551629)
chr3 (468-608)||(3469486-3469627)
chr3 (468-600)||(13948779-13948912)
chr3 (559-648)||(26463846-26463935)
chr3 (476-608)||(52032145-52032278)
chr3 (551-627)||(9367824-9367900)
chr3 (471-606)||(11910701-11910837)
chr3 (492-627)||(25108364-25108500)
chr3 (510-654)||(36417730-36417874)
chr3 (467-598)||(52032435-52032567)
chr3 (388-462)||(5031792-5031865)
chr3 (476-608)||(32306710-32306843)
chr3 (467-608)||(3596107-3596249)
chr3 (510-608)||(10307661-10307759)
chr3 (471-608)||(29686226-29686364)
chr3 (492-608)||(4323490-4323607)
chr3 (476-608)||(41421979-41422112)
chr3 (591-656)||(41988085-41988149)
chr3 (476-627)||(33156263-33156415)
chr3 (491-605)||(2796201-2796316)
chr3 (467-608)||(10294845-10294987)
chr3 (468-572)||(4322591-4322695)
chr3 (559-604)||(40758402-40758447)
chr3 (469-537)||(42855664-42855733)
chr3 (559-603)||(26463723-26463767)
chr3 (559-603)||(51994042-51994086)
chr3 (510-609)||(51994173-51994272)
chr3 (559-654)||(53756835-53756930)
chr3 (591-625)||(23272946-23272980)
chr3 (492-625)||(25107236-25107370)
chr3 (559-629)||(54317899-54317968)
chr3 (559-604)||(2796406-2796451)
chr3 (492-580)||(23276299-23276388)
chr3 (559-600)||(29118629-29118670)
chr3 (559-620)||(35712122-35712183)
chr3 (559-604)||(42343023-42343068)
chr3 (559-608)||(47857533-47857582)
[»] chr7 (80 HSPs)
chr7 (467-717)||(34928648-34928899)
chr7 (467-717)||(39686532-39686783)
chr7 (472-717)||(30948163-30948409)
chr7 (468-717)||(32680594-32680844)
chr7 (551-717)||(22871391-22871557)
chr7 (559-717)||(17102168-17102326)
chr7 (510-717)||(27991887-27992094)
chr7 (559-717)||(2640269-2640427)
chr7 (559-717)||(28469101-28469257)
chr7 (551-717)||(42731598-42731764)
chr7 (559-705)||(19204649-19204795)
chr7 (559-705)||(32053234-32053380)
chr7 (559-717)||(37657029-37657187)
chr7 (507-717)||(3914317-3914527)
chr7 (559-717)||(42019688-42019846)
chr7 (559-717)||(6253619-6253777)
chr7 (510-717)||(48788845-48789052)
chr7 (467-605)||(30948420-30948559)
chr7 (559-717)||(10935973-10936131)
chr7 (468-605)||(34928910-34929048)
chr7 (468-605)||(39686794-39686932)
chr7 (598-717)||(45010774-45010893)
chr7 (627-717)||(6571161-6571251)
chr7 (627-717)||(24388998-24389088)
chr7 (510-656)||(10935836-10935982)
chr7 (510-656)||(28469248-28469394)
chr7 (510-656)||(42731461-42731607)
chr7 (627-707)||(32298895-32298975)
chr7 (627-717)||(27396754-27396844)
chr7 (468-605)||(32680855-32680993)
chr7 (469-608)||(25453128-25453268)
chr7 (510-656)||(27396835-27396981)
chr7 (559-656)||(40379860-40379957)
chr7 (476-608)||(42618197-42618330)
chr7 (469-608)||(32068382-32068522)
chr7 (469-608)||(42617911-42618051)
chr7 (468-599)||(43266561-43266693)
chr7 (467-605)||(32934637-32934776)
chr7 (476-600)||(10600243-10600368)
chr7 (559-656)||(32053383-32053480)
chr7 (468-608)||(43266265-43266406)
chr7 (491-662)||(23181228-23181400)
chr7 (491-608)||(25628500-25628618)
chr7 (491-608)||(32934370-32934488)
chr7 (559-656)||(3914229-3914326)
chr7 (559-620)||(17885719-17885780)
chr7 (468-600)||(33828268-33828401)
chr7 (521-656)||(2640418-2640553)
chr7 (478-608)||(32688506-32688637)
chr7 (491-600)||(25628772-25628882)
chr7 (467-608)||(27138227-27138369)
chr7 (476-601)||(46204428-46204554)
chr7 (591-656)||(24388942-24389007)
chr7 (476-608)||(32068103-32068236)
chr7 (591-656)||(42019837-42019902)
chr7 (467-608)||(23058715-23058857)
chr7 (467-608)||(28890577-28890719)
chr7 (551-604)||(6571240-6571293)
chr7 (476-608)||(25453414-25453547)
chr7 (626-698)||(13311194-13311266)
chr7 (559-627)||(13386016-13386084)
chr7 (469-608)||(22081560-22081699)
chr7 (469-608)||(22081845-22081985)
chr7 (505-580)||(7356514-7356589)
chr7 (591-656)||(13311276-13311338)
chr7 (510-605)||(17102062-17102157)
chr7 (478-608)||(18087626-18087757)
chr7 (559-656)||(45010689-45010783)
chr7 (510-580)||(6253513-6253583)
chr7 (591-656)||(37656975-37657038)
chr7 (491-603)||(13044694-13044807)
chr7 (559-603)||(24389078-24389122)
chr7 (520-608)||(46205595-46205683)
chr7 (517-581)||(47733069-47733133)
chr7 (559-626)||(12229342-12229409)
chr7 (518-605)||(27991789-27991876)
chr7 (510-580)||(6571055-6571125)
chr7 (559-608)||(39274961-39275011)
chr7 (559-608)||(17886778-17886827)
chr7 (491-575)||(22871598-22871683)
[»] chr6 (48 HSPs)
chr6 (472-717)||(28000388-28000634)
chr6 (467-717)||(14196613-14196864)
chr6 (467-661)||(362868-363063)
chr6 (491-717)||(30337597-30337824)
chr6 (510-707)||(33517723-33517920)
chr6 (559-717)||(21627804-21627962)
chr6 (559-717)||(30725938-30726096)
chr6 (522-717)||(17734250-17734443)
chr6 (559-707)||(30804050-30804198)
chr6 (510-717)||(3059436-3059642)
chr6 (559-717)||(12080815-12080973)
chr6 (467-603)||(22372950-22373087)
chr6 (467-595)||(22367423-22367552)
chr6 (510-682)||(33647165-33647337)
chr6 (469-605)||(363090-363227)
chr6 (510-656)||(21627953-21628099)
chr6 (476-600)||(25485960-25486085)
chr6 (627-717)||(11393017-11393107)
chr6 (468-603)||(32593489-32593625)
chr6 (467-605)||(28000645-28000784)
chr6 (623-705)||(25486084-25486166)
chr6 (510-656)||(30725801-30725947)
chr6 (510-656)||(33517576-33517722)
chr6 (470-575)||(14196905-14197011)
chr6 (491-608)||(31407164-31407282)
chr6 (518-656)||(33647013-33647151)
chr6 (559-662)||(30803952-30804055)
chr6 (510-656)||(11392880-11393026)
chr6 (468-608)||(21836316-21836457)
chr6 (476-608)||(22502781-22502914)
chr6 (518-656)||(12080686-12080824)
chr6 (467-608)||(22503060-22503202)
chr6 (476-608)||(7160811-7160944)
chr6 (466-580)||(25486211-25486326)
chr6 (559-620)||(11434893-11434954)
chr6 (469-608)||(6517503-6517642)
chr6 (517-656)||(3059306-3059445)
chr6 (467-608)||(7905529-7905671)
chr6 (470-598)||(7905244-7905373)
chr6 (491-598)||(7161100-7161208)
chr6 (491-608)||(21836054-21836170)
chr6 (559-627)||(12407599-12407667)
chr6 (510-605)||(30337491-30337586)
chr6 (559-623)||(28498298-28498362)
chr6 (559-623)||(29810709-29810773)
chr6 (491-608)||(15913570-15913688)
chr6 (559-608)||(15913834-15913883)
chr6 (551-608)||(20651935-20651992)
[»] scaffold0024 (2 HSPs)
scaffold0024 (472-717)||(141597-141843)
scaffold0024 (468-605)||(141854-141992)
[»] scaffold0559 (2 HSPs)
scaffold0559 (467-717)||(1381-1636)
scaffold0559 (469-605)||(1233-1370)
[»] scaffold0295 (2 HSPs)
scaffold0295 (551-717)||(2322-2488)
scaffold0295 (559-662)||(2234-2337)
[»] scaffold0020 (1 HSPs)
scaffold0020 (559-717)||(139820-139978)
[»] scaffold0007 (1 HSPs)
scaffold0007 (510-717)||(1917-2127)
[»] scaffold0031 (2 HSPs)
scaffold0031 (510-717)||(69144-69351)
scaffold0031 (491-656)||(68987-69153)
[»] scaffold0075 (2 HSPs)
scaffold0075 (559-717)||(14520-14678)
scaffold0075 (591-656)||(14669-14734)
[»] scaffold0005 (2 HSPs)
scaffold0005 (559-698)||(37655-37793)
scaffold0005 (522-656)||(37803-37937)
[»] scaffold0205 (3 HSPs)
scaffold0205 (627-707)||(21128-21208)
scaffold0205 (467-577)||(21007-21118)
scaffold0205 (469-574)||(21260-21366)
[»] scaffold0006 (2 HSPs)
scaffold0006 (468-608)||(222075-222216)
scaffold0006 (491-608)||(221813-221929)
[»] scaffold0388 (1 HSPs)
scaffold0388 (476-608)||(12525-12658)
[»] scaffold0328 (2 HSPs)
scaffold0328 (468-608)||(11426-11567)
scaffold0328 (476-608)||(11147-11280)
[»] scaffold0771 (1 HSPs)
scaffold0771 (468-600)||(919-1052)
[»] scaffold0599 (1 HSPs)
scaffold0599 (471-606)||(2395-2531)
[»] scaffold0042 (1 HSPs)
scaffold0042 (471-608)||(12066-12204)
[»] scaffold0775 (1 HSPs)
scaffold0775 (551-608)||(5045-5102)


Alignment Details
Target: chr1 (Bit Score: 346; Significance: 0; HSPs: 95)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 346; E-Value: 0
Query Start/End: Original strand, 18 - 464
Target Start/End: Original strand, 7989073 - 7989525
Alignment:
Q  18 aaacgggccctaagcacacggcacaaaaagggccgaagaacaaacttttttctcaagtgcagatctgacatatttttgtttttggtagatgtaattaagg 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7989073 aaacgggccctaagcacacggcacaaaaagggccgaagaacaaacttttttctcaagtgcagatctgacatatttttgtttttggtagatgtaattaagg 7989172  T
Q  118 ttcatttgtagaaaatattgtttgagataattatggtaaaaatgattgtacaatagataattgatttcttcacaaagaatgtttgctgcaattgtttgag 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7989173 ttcatttgtagaaaatattgtttgagataattatggtaaaaatgattgtacaatagataattgatttcttcacaaagaatgtttgctgcaattgtttgag 7989272  T
Q  218 ctattc--------accaacttgaactatttgcacttcacttttatatcgcctattgtttgtgcaaattgcttcctttgtctcgagtttcatcactgtga 309  Q
    ||||||        |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  7989273 ctattcacatttgtaccaacttgaactaattgcacttcacttttatatcgcctattgtttgtgcaaattgcttcctttgtctcgagtttcatcgctgtga 7989372  T
Q  310 gtatatttggaaggtagatttcannnnnnnnnnnnnnnnnnncgaaattttagtccaagaacaaatttggagttcctgtttataagatgtgaaagaacag 409  Q
    |||||||||||||||||||||||                    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7989373 gtatatttggaaggtagatttcatttttttagactttttt---gaaattttagtccaagaacaaatttggagttcctgtttataagatgtgaaagaacag 7989469  T
Q  410 a-ttttttgggtgaaatggcaaagtggtatggagaatgttgcttagaatgtttgat 464  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7989470 atttttttgggtgaaatggcaaagtggtatggagaatgttgcttagaatgtttgat 7989525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 469 - 717
Target Start/End: Complemental strand, 52134465 - 52134216
Alignment:
Q  469 ggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatt 567  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||| ||    
T  52134465 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgttaatcctggcattttaaccctgcaattgttaatcgtt 52134366  T
Q  568 taaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaagaa 667  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  52134365 taaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgtcacacatgaaatttcaattttgcccttaagaa 52134266  T
Q  668 gaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  52134265 gaggacaaaatattgaagaaagaattggaaacccaggggtaaatttggaa 52134216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 467 - 717
Target Start/End: Original strand, 4716466 - 4716717
Alignment:
Q  467 aaggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatca 565  Q
    |||| |||||||||||||||||| ||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||     
T  4716466 aaggtttattgatgtgtttagcccttgcaattaggtggcatttaaaaattcgtccatgtaattgctaatcctgacattttaacccggcaattgttaatcg 4716565  T
Q  566 tttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaag 665  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||    
T  4716566 tttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgtcacacatgaaattccaattttgcccttaag 4716665  T
Q  666 aagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  4716666 aagaggacaaaatattgaagaaagaattggaaacccaggggtaaatttggaa 4716717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 469 - 717
Target Start/End: Original strand, 33442594 - 33442843
Alignment:
Q  469 ggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatt 567  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||||| ||    
T  33442594 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtctctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtt 33442693  T
Q  568 taaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaagaa 667  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||    
T  33442694 taaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgtcacacatgaaattccaattttgcccttaagaa 33442793  T
Q  668 gaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    ||||||||||||||||||||||||||||||| |||||| | |||||||||    
T  33442794 gaggacaaaatattgaagaaagaattggaaatccagggataaatttggaa 33442843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 467 - 717
Target Start/End: Original strand, 31514316 - 31514567
Alignment:
Q  467 aaggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatca 565  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||| |||| ||| |||||||||||||||||||||||||     
T  31514316 aaggtttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgttcctgtaattgttaattctggcattttaaccctgcaattgttaatcg 31514415  T
Q  566 tttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaag 665  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||    
T  31514416 tttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgtcacacatgaaattccaattttgcccttaag 31514515  T
Q  666 aagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  31514516 aagaggacaaaatattgaagaaagaattggaaatccaggggtaaatttggaa 31514567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 179; E-Value: 3e-96
Query Start/End: Original strand, 468 - 717
Target Start/End: Original strand, 24905166 - 24905416
Alignment:
Q  468 aggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcat 566  Q
    ||||||| ||||||| |||| | ||||||||||||| ||||||||| ||||||||||||||||||||||||  || |||| || ||||||||||||||||    
T  24905166 aggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatccttgcaatttagccttgcaattgttaatcat 24905265  T
Q  567 ttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaaga 666  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||| |||||||||||||||||    
T  24905266 ttaaaatttggtccttggaccaacttaatcactgccacgtcactaatttgatgacgtggcaatcactgtcgcacatgaaattccaattttgcccttaaga 24905365  T
Q  667 agaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  24905366 agaggacaaaatattgaagaaagaattggaaacccaggggtaaatttggaa 24905416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 162; E-Value: 4e-86
Query Start/End: Original strand, 467 - 714
Target Start/End: Complemental strand, 28011767 - 28011514
Alignment:
Q  467 aaggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatca 565  Q
    |||||||| ||||||| |||| | ||||||||||||| ||||||||| ||||||||||||||||||||||||| || |||| || |||||||||||||||    
T  28011767 aaggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatca 28011668  T
Q  566 tttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacac-----gtgaaatttcaattttgccc 660  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||      ||||||| ||||||| |||    
T  28011667 tttaaaatttggtccttggaccaacttaatcactgtcacgtcactaatttgatgacgtggcaatcactgtcacacatgaaatgaaattccaattttaccc 28011568  T
Q  661 ttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttg 714  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  28011567 ttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaatttg 28011514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 510 - 716
Target Start/End: Complemental strand, 6367948 - 6367742
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcac 609  Q
    |||||| ||||||||| | |||||||||  ||   || || ||||||  ||||||||||||||||| |||||| |||||| |||||||||||||||||||    
T  6367948 aaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcac 6367849  T
Q  610 taatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtga 709  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  6367848 taatttgatgacgtggcaatcactgccacacatgaaattccaatttttcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaa 6367749  T
Q  710 atttgga 716  Q
    | |||||    
T  6367748 aattgga 6367742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 510 - 706
Target Start/End: Original strand, 183263 - 183459
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcac 609  Q
    |||||| ||||||||| | |||||||||  ||   || || ||||||  ||||||||||||||||| |||||| |||||| |||||||||||||||||||    
T  183263 aaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttagtcctttgaccaacttaatcactgccacgtcac 183362  T
Q  610 taatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccagggg 706  Q
    |||||||||||||||||||||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  183363 taatttgatgacgtggcaatcactgccaaacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccagggg 183459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 510 - 717
Target Start/End: Original strand, 34464491 - 34464698
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcac 609  Q
    |||||| |||| |||||| ||||||| || || |||| || ||||||  ||||||||||||||||| ||| || |||||| |||||||||||||||||||    
T  34464491 aaaattggtccatgtaatcgctaatcttggcaatttacccttgcaatgtttaatcatttaaaatttcgtcatttgaccaacttaatcactgccacgtcac 34464590  T
Q  610 taatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtga 709  Q
    ||||| |||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |    
T  34464591 taattcgatgacgtggcaatcactaccacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaaaccaggggtaa 34464690  T
Q  710 atttggaa 717  Q
    | ||||||    
T  34464691 aattggaa 34464698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 510 - 717
Target Start/End: Complemental strand, 26024778 - 26024571
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcac 609  Q
    |||||| ||||||||||| |||||||||  ||   ||  | ||||||  ||||||||||||||||| |||||| |||||| |||||||||||||||||||    
T  26024778 aaaattggtccctgtaatcgctaatccttgcaaactagtcttgcaatcattaatcatttaaaatttcgtcctttgaccaatttaatcactgccacgtcac 26024679  T
Q  610 taatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtga 709  Q
    ||||||||||||||| ||||||||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  26024678 taatttgatgacgtgacaatcactgccacacatgaaattctaattttgcccttaagaagaggacaaaatattgaagaaagaattgaaaacccaggggtaa 26024579  T
Q  710 atttggaa 717  Q
    | ||||||    
T  26024578 aattggaa 26024571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 559 - 717
Target Start/End: Complemental strand, 1841796 - 1841638
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| |||||| |||||| |||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||  ||||||||    
T  1841796 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatttgatgacgtgacaatcactaccacacatgaaattcaaattttgc 1841697  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  1841696 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaaattggaa 1841638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 559 - 717
Target Start/End: Original strand, 13914159 - 13914317
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| |||||| |||||| ||||||||| |||||||||||||||||||||||| ||||||||| ||||| ||||||| ||||||| |    
T  13914159 ttaatcatttaaaatttcgtcctttgaccaacttaatcactaccacgtcactaatttgatgacgtgacaatcactgtcacacatgaaattccaattttac 13914258  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  13914259 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaaattggaa 13914317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 559 - 717
Target Start/End: Complemental strand, 14879308 - 14879150
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| |||||| |||||| |||||||||||||||||||||||| |||||||||||||||||| |||||| ||||| | |||||||||    
T  14879308 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaattcgatgacgtggcaatcactaccacacatgaaactccaattttgc 14879209  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| || ||||||    
T  14879208 ccttaagaagatgacaaaatattgaagaaagaattggaaacccaggggtaaaattggaa 14879150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 559 - 717
Target Start/End: Original strand, 37578283 - 37578441
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| || ||| |||||| ||||||||||| | ||||||||||||||||||||||||||||| |||||| ||||||| |||||||||    
T  37578283 ttaatcatttaaaatttcgttctttgaccaacttaatcactgctatgtcactaatttgatgacgtggcaatcactaccacacatgaaattccaattttgc 37578382  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  37578383 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaaattggaa 37578441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 561 - 707
Target Start/End: Complemental strand, 43759157 - 43759011
Alignment:
Q  561 aatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgccc 660  Q
    ||||||||||||||| |||||| |||||| |||| ||||| ||| ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  43759157 aatcatttaaaatttcgtcctttgaccaacttaaccactgtcacatcactaatttgatgacgtggcaatcactgccacacatgaaattccaattttgccc 43759058  T
Q  661 ttaagaagaggacaaaatattgaagaaagaattggaaacccaggggt 707  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  43759057 ttaagaagaggacaaaatattgaagaaagaattggaaacccaggggt 43759011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 510 - 717
Target Start/End: Original strand, 47999165 - 47999372
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcac 609  Q
    |||||| ||||||||| | |||||||||  ||   || || ||||||  ||||||||||||||||| |||||| |||||| ||||| | |||||||||||    
T  47999165 aaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttagtcctttgaccaacttaattattgccacgtcac 47999264  T
Q  610 taatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtga 709  Q
     ||||||||||||||||||||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |    
T  47999265 caatttgatgacgtggcaatcactgccaaacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaactcaggggtaa 47999364  T
Q  710 atttggaa 717  Q
    | ||||||    
T  47999365 aattggaa 47999372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 559 - 717
Target Start/End: Original strand, 23209452 - 23209610
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| || ||| |||||| |||||||||||||||||||||||| ||||||||| |||||||| |||||| ||||||| ||||||| |    
T  23209452 ttaatcatttaaaattttgttctttgaccaacttaatcactgccacgtcactaattcgatgacgtgacaatcactaccacacatgaaattccaatttttc 23209551  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  23209552 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaaattggaa 23209610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 559 - 717
Target Start/End: Complemental strand, 30711664 - 30711506
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| ||| || |||||| ||||||||||||||||||||||||||||||||| |||||| || |||||| ||||||| |||||||||    
T  30711664 ttaatcatttaaaatttcgtcatttgaccaacttaatcactgccacgtcactaatttgatgacgttgcaatcgctaccacacatgaaattccaattttgc 30711565  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||    
T  30711564 ccttaagaagaggacaaaatattgaagaaagaattggaaactcaggggtaaaattggaa 30711506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 559 - 717
Target Start/End: Complemental strand, 35152680 - 35152522
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| |||||| |||||| |||||||||| ||| ||||||||| |||||||||||||||||| |||||| ||||||| |||||||||    
T  35152680 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgtcacatcactaattcgatgacgtggcaatcactaccacacatgaaattccaattttgc 35152581  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| || ||||||    
T  35152580 ccttaagaagaggacaaaatattgaagaaagaattgaaaacccaggggtaaaattggaa 35152522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 559 - 717
Target Start/End: Complemental strand, 41099070 - 41098912
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| ||| || |||||| |||||||||| || |||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  41099070 ttaatcatttaaaatttcgtcatttgaccaacttaatcactgtcatgtcactaatttgatgacgtggcaatcactgtcacacgtgaaattccaattttgc 41098971  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||| || ||||||    
T  41098970 ccttaagaagaggacaaaatattgaagaaagaattggaagcccatgggtaaaattggaa 41098912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 559 - 717
Target Start/End: Complemental strand, 1103798 - 1103640
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| |||||| |||||| ||| |||||||||||||||||||||||||| |||||||||||| |||| | ||||||| ||||||| |    
T  1103798 ttaatcatttaaaatttcgtcctttgaccaacttattcactgccacgtcactaatttgatgatgtggcaatcactaccactcatgaaattccaattttac 1103699  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| || ||||||    
T  1103698 ccttaagaagaggacaaaatattgaagaaagaattgaaaacccaggggtaaaattggaa 1103640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 559 - 717
Target Start/End: Complemental strand, 49723063 - 49722906
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    |||||||||||||||||  ||||| |||||| |||||||||||||||||||||||||||| |||||||||||||| |||||| |||||  || |||||||    
T  49723063 ttaatcatttaaaatttcatcctttgaccaacttaatcactgccacgtcactaatttgataacgtggcaatcactaccacacatgaaa-ctccattttgc 49722965  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  49722964 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaaattggaa 49722906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 559 - 708
Target Start/End: Complemental strand, 48779456 - 48779307
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| |||||| |||||| |||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||| |||||||||    
T  48779456 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaattcgatgacgtggcaatcactaccacacatgaaattccaattttgc 48779357  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtg 708  Q
    ||||||||||| |||||||| ||||||||||||| ||||||| |||||||    
T  48779356 ccttaagaagatgacaaaatgttgaagaaagaatgggaaacctaggggtg 48779307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 559 - 703
Target Start/End: Complemental strand, 7821291 - 7821147
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||| ||||| |||||| |||||| |||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||| || ||||||    
T  7821291 ttaatcatttataatttcgtcctttgaccaacttaatcactgtcacgtcactaatttgatgacgtggcaatcactaccacacatgaaattccatttttgc 7821192  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccag 703  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  7821191 ccttaagaagaggacaaaatattgaagaaagaattgaaaacccag 7821147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 559 - 717
Target Start/End: Original strand, 17661942 - 17662099
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| |||||| |||||| ||||||| |||||||||||||||| ||||||| ||||||||||  ||||| ||||||| |||||||||    
T  17661942 ttaatcatttaaaatttcgtcctttgaccaacttaatca-tgccacgtcactaattcgatgacgcggcaatcactatcacacatgaaattccaattttgc 17662040  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| || ||||||    
T  17662041 ccttaagaagaggacaaaatattgaagaaagaattgaaaacccaggggtaaaattggaa 17662099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 559 - 707
Target Start/End: Original strand, 36694373 - 36694521
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| | |||| |||||| |||||||||| || |||||||||| |||||||| ||||||||| |||||| ||||||| |||||||||    
T  36694373 ttaatcatttaaaatttcgccctttgaccaacttaatcactgtcaagtcactaattcgatgacgtagcaatcactaccacacatgaaattccaattttgc 36694472  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggt 707  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||    
T  36694473 ctttaagaagaggacaaaatattgaagaaagaattggaaacccaggggt 36694521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 559 - 707
Target Start/End: Original strand, 36710474 - 36710622
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| | |||| |||||| |||||||||| || |||||||||| |||||||| ||||||||| |||||| ||||||| |||||||||    
T  36710474 ttaatcatttaaaatttcgccctttgaccaacttaatcactgtcaagtcactaattcgatgacgtagcaatcactaccacacatgaaattccaattttgc 36710573  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggt 707  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||    
T  36710574 ctttaagaagaggacaaaatattgaagaaagaattggaaacccaggggt 36710622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 559 - 702
Target Start/End: Complemental strand, 32917597 - 32917454
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    |||||||||||||||||  ||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||| |    
T  32917597 ttaatcatttaaaatttcatcctttgaccaacttaatcattgccacgtcactaatttgatgacgtggcaatcactgccacatatgaaattccaattttac 32917498  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaaccca 702  Q
    |||||| || ||||||||||||||||||||||||||||||||||    
T  32917497 ccttaaaaataggacaaaatattgaagaaagaattggaaaccca 32917454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 559 - 717
Target Start/End: Original strand, 40210461 - 40210619
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| |||||| |||||| ||||||||||||||| || |||||||||||| ||||||||||||  ||| |||||||| |||||||||    
T  40210461 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgacattaatttgatgacatggcaatcactgttacatgtgaaattccaattttgc 40210560  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    |||||||||||| ||||||||||||||||| |||||||| ||||||||| || ||||||    
T  40210561 ccttaagaagagaacaaaatattgaagaaaaaattggaagcccaggggtaaaattggaa 40210619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 559 - 717
Target Start/End: Complemental strand, 40772809 - 40772652
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||| |||| |||||| |||||| |||||| ||||||||||| |||||||||||| |||||| ||||||||||| |||||| ||||||| |||||||||    
T  40772809 ttaattatttcaaatttcgtcctttgaccaacttaatcactgc-acgtcactaattcgatgacttggcaatcactcccacacatgaaattccaattttgc 40772711  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| || ||||||    
T  40772710 ccttaagaagaggacaaaatattgaagaaagatttggaaacccaggggtaaaattggaa 40772652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 559 - 717
Target Start/End: Original strand, 19017720 - 19017878
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| || | | |||||| ||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||| |||||||||    
T  19017720 ttaatcatttaaaatttcgttcgttgaccaacttaatcactgccacgtcactaatttgatgacgtggcaatcattgtcacacatgaaattccaattttgc 19017819  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    |||| |||||||||||||||||||| |||| ||||||||| ||||| || || ||||||    
T  19017820 ccttgagaagaggacaaaatattgatgaaataattggaaatccaggagtaaaattggaa 19017878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 559 - 717
Target Start/End: Complemental strand, 19323229 - 19323071
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    |||||||||||||| || || ||| |||||| ||||||||| ||| |||||||||||||||||||| ||||||||| ||||| ||||||||||||||| |    
T  19323229 ttaatcatttaaaagttcgttctttgaccaacttaatcactaccatgtcactaatttgatgacgtgacaatcactgtcacacatgaaatttcaattttac 19323130  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    ||| ||||| |||| |||||||||||||||||||||||||||||||||| || ||||||    
T  19323129 cctcaagaaaaggataaaatattgaagaaagaattggaaacccaggggtaaaattggaa 19323071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 591 - 705
Target Start/End: Complemental strand, 19516090 - 19515976
Alignment:
Q  591 ttaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaaga 690  Q
    ||||||| |||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  19516090 ttaatcattgccacgtcactaattcgatgacgtggcaatcactaccacacgtgaaattccaattttgcccttaagaagaggacaaaatattgaagagaga 19515991  T
Q  691 attggaaacccaggg 705  Q
    |||||||||||||||    
T  19515990 attggaaacccaggg 19515976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 471 - 605
Target Start/End: Complemental strand, 33442989 - 33442854
Alignment:
Q  471 cttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcattta 569  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  33442989 cttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcattta 33442890  T
Q  570 aaatttggtccttggaccaaattaatcactgccacg 605  Q
    |||||| |||| |   || | |||||||||||||||    
T  33442889 aaatttcgtccctctccccacttaatcactgccacg 33442854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 472 - 605
Target Start/End: Complemental strand, 31514711 - 31514577
Alignment:
Q  472 ttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaa 570  Q
    |||||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  31514711 ttattgatgtgtttagcccttacaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattattaatcatttaa 31514612  T
Q  571 aatttggtccttggaccaaattaatcactgccacg 605  Q
    ||||| |||| |   || | |||||||||||||||    
T  31514611 aatttcgtccctctccccacttaatcactgccacg 31514577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 468 - 605
Target Start/End: Original strand, 52134067 - 52134205
Alignment:
Q  468 aggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcat 566  Q
    |||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||| ||||||||||| |    
T  52134067 aggcttattgatgtgtttagcccttgcaattaggcggtatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgtaattgttaatcgt 52134166  T
Q  567 ttaaaatttggtccttggaccaaattaatcactgccacg 605  Q
    ||||||||| |||| |   || | |||||||||||||||    
T  52134167 ttaaaatttcgtccctctccccacttaatcactgccacg 52134205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 551 - 717
Target Start/End: Complemental strand, 42248816 - 42248652
Alignment:
Q  551 tgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttc 650  Q
    ||||||| ||||| ||||||||||| | | || |||||| ||||||| || ||||||||||||| |||||||  ||||||||| |||||| ||||||| |    
T  42248816 tgcaattattaattatttaaaatttcgacatttgaccaacttaatcattgtcacgtcactaattcgatgacg--gcaatcactaccacacatgaaattcc 42248719  T
Q  651 aattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    ||||||||||||||||||| |||||||||||||||||| | ||||||||||| |||| || ||||||    
T  42248718 aattttgcccttaagaagatgacaaaatattgaagaaatatttggaaacccacgggtaaaattggaa 42248652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 491 - 634
Target Start/End: Original strand, 7820976 - 7821120
Alignment:
Q  491 ttgcaattaggcggcatttaa-aattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaa 589  Q
    ||||||||||| | | ||||| |||| ||||||||||| ||||||||| ||| |||| || |||| |  ||||||||||||||||| |||||| ||||||    
T  7820976 ttgcaattaggggtcctttaataattagtccctgtaatcgctaatccttacaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaa 7821075  T
Q  590 attaatcactgccacgtcactaatttgatgacgtggcaatcactg 634  Q
      |||||||||||||||||||||||||||||||||||||||||||    
T  7821076 cgtaatcactgccacgtcactaatttgatgacgtggcaatcactg 7821120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 510 - 656
Target Start/End: Original strand, 6367604 - 6367750
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcac 609  Q
    |||||| ||||||||||| |||||||||| || |||| || |||| |  ||||||||||||||||| |||| |   || | |||||||||||||||||||    
T  6367604 aaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcac 6367703  T
Q  610 taatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    ||||||||||||||| ||||||||| ||||| ||||| | |||||||    
T  6367704 taatttgatgacgtgacaatcactgtcacacatgaaactccaatttt 6367750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 627 - 717
Target Start/End: Original strand, 24009700 - 24009790
Alignment:
Q  627 aatcactgccacacgtgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    |||||||| |||  |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || ||||||    
T  24009700 aatcactgtcacgtgtgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaagggtaaaattggaa 24009790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 472 - 575
Target Start/End: Complemental strand, 4716861 - 4716758
Alignment:
Q  472 ttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaa 570  Q
    |||||||||||||||||| ||||||||||||   |||||||| || |||| || |||||||||||||| |||||||||||||||||||||||||||||||    
T  4716861 ttattgatgtgtttagcccttgcaattaggcaatatttaaaaatttgtcc-tgaaattgctaatcctggcattttaaccctgcaattgttaatcatttaa 4716763  T
Q  571 aattt 575  Q
    |||||    
T  4716762 aattt 4716758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 559 - 656
Target Start/End: Original strand, 4960631 - 4960728
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    ||||||||||||||||| |||| |   || | |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||    
T  4960631 ttaatcatttaaaatttcgtccctcttcccacttaatcactgccacgtcactaatttgatgacgtggcaatcactgtcacacatgaaattccaatttt 4960728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 467 - 608
Target Start/End: Original strand, 28324803 - 28324944
Alignment:
Q  467 aaggcttattgatgtgtttagcctttgcaattaggcggcatttaaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcat 566  Q
    |||||||| ||||||||||   | ||||||||||||| | ||||||||| || | |||||| ||||||||||||| |||| || |||| |  ||||||||    
T  28324803 aaggcttaatgatgtgtttcctccttgcaattaggcgtcgtttaaaattagttcatgtaatcgctaatcctgacaatttacccttgcattatttaatcat 28324902  T
Q  567 ttaaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    ||||||||| ||| || |||||| ||||||||||||||||||    
T  28324903 ttaaaatttcgtcttttgaccaacttaatcactgccacgtca 28324944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 468 - 608
Target Start/End: Original strand, 40714443 - 40714584
Alignment:
Q  468 aggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcat 566  Q
    ||||||| |||||||||| | | ||||||||||||| ||||||||| || ||||||||||| | |||||||| || |||| || |||| |  ||||||||    
T  40714443 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctggcaatttacccttgcattgtttaatcat 40714542  T
Q  567 ttaaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    ||||||||| ||| || |||||| ||||||||||||||||||    
T  40714543 ttaaaatttcgtcatttgaccaacttaatcactgccacgtca 40714584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 469 - 604
Target Start/End: Original strand, 49955347 - 49955483
Alignment:
Q  469 ggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatt 567  Q
    |||||| |||||||||| | | ||||||||||||  ||||||||| || ||||||||||| |||||||||| || |||| || |||| |  |||||||||    
T  49955347 ggcttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatt 49955446  T
Q  568 taaaatttggtccttggaccaaattaatcactgccac 604  Q
    |||||||| |||||| |||||| ||||||||||||||    
T  49955447 taaaattttgtcctttgaccaacttaatcactgccac 49955483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 627 - 717
Target Start/End: Original strand, 10304048 - 10304138
Alignment:
Q  627 aatcactgccacacgtgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||| | || || ||||||||||||||||||||| |||| || ||||||    
T  10304048 aatcactgccacacatgaaattccaattttgcccttaagaagaggaaagaagatggaagaaagaattggaaacccatgggtaaaattggaa 10304138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 510 - 656
Target Start/End: Complemental strand, 34464835 - 34464689
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcac 609  Q
    |||||| |||| |||||| ||||||| || || |||| || ||||||  ||||||||||||||||| |||| |   || | ||||||||||||| |||||    
T  34464835 aaaattggtccatgtaatcgctaatcttggcaatttacccttgcaatgtttaatcatttaaaattttgtccctctccccacttaatcactgccatgtcac 34464736  T
Q  610 taatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    ||||||||||||||| ||||||||| || || ||||||| |||||||    
T  34464735 taatttgatgacgtgacaatcactgtcatacatgaaattccaatttt 34464689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 522 - 656
Target Start/End: Complemental strand, 37578566 - 37578432
Alignment:
Q  522 tgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgac 621  Q
    |||||| |||||||||| || |||| || | || |  ||||||||||||||||| |||  |   || | |||||||||||||||||||||||||||||||    
T  37578566 tgtaatcgctaatcctggcaatttacccttacattgattaatcatttaaaatttcgtcactctccccacttaatcactgccacgtcactaatttgatgac 37578467  T
Q  622 gtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    ||||||||||||| ||||| ||||||| |||||||    
T  37578466 gtggcaatcactgtcacacatgaaattccaatttt 37578432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 522 - 656
Target Start/End: Complemental strand, 40210744 - 40210610
Alignment:
Q  522 tgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgac 621  Q
    |||||| |||||| ||| || |||| || |||| |  ||||||||||||||||| |||| |   || | |||||||||||||||||||||| ||||||||    
T  40210744 tgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaaattgatgac 40210645  T
Q  622 gtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    ||||||||||||| ||||| ||||||| |||||||    
T  40210644 gtggcaatcactgtcacacatgaaattccaatttt 40210610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 510 - 656
Target Start/End: Original strand, 41098775 - 41098921
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcac 609  Q
    |||||| ||| ||||||| ||||||||||||| |||| || |||| |  ||||||||||||||||| ||||     || | ||||||||| |||| ||||    
T  41098775 aaaattggtctctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaattttgtccccctccccacttaatcactaccacatcac 41098874  T
Q  610 taatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    ||||||||||||||||||||||||| ||||  ||||||| |||||||    
T  41098875 taatttgatgacgtggcaatcactgtcacatatgaaattccaatttt 41098921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 559 - 656
Target Start/End: Original strand, 19322983 - 19323080
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    |||||||||||||| || || ||| |||||| ||||||||| ||| |||||||||||||||||||| ||||||||| ||||| ||||||| |||||||    
T  19322983 ttaatcatttaaaagttcgttctttgaccaacttaatcactaccatgtcactaatttgatgacgtgacaatcactgtcacacatgaaattccaatttt 19323080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 559 - 656
Target Start/End: Original strand, 30711418 - 30711515
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    ||||||||||||||||| |||| | | || | ||||||||||||| ||||||||||||| ||||||||||||||||||| || ||||||| |||||||    
T  30711418 ttaatcatttaaaatttcgtccctcgccccacttaatcactgccatgtcactaatttgacgacgtggcaatcactgccatacatgaaattccaatttt 30711515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 468 - 600
Target Start/End: Original strand, 37929417 - 37929550
Alignment:
Q  468 aggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcat 566  Q
    ||||||| |||||||||| | | ||||||||||||| ||||||||| || |||||||| || ||||||||||||| |||| || | || |  ||||||||    
T  37929417 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgttatcgctaatcctgacaatttacccttacattatttaatcat 37929516  T
Q  567 ttaaaatttggtccttggaccaaattaatcactg 600  Q
    ||||||||| |||||| |||||| ||||||||||    
T  37929517 ttaaaatttcgtcctttgaccaacttaatcactg 37929550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 510 - 659
Target Start/End: Original strand, 46163072 - 46163221
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcac 609  Q
    |||||| |||| |||||| ||||||||||||| |||| || |||| |  ||||||||||||||||| |||  |   || | ||||| |||| || |||||    
T  46163072 aaaattggtccatgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtctctctccccacttaattactgtcatgtcac 46163171  T
Q  610 taatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcc 659  Q
    |||||||||||||||||||| ||||||| || ||||||| ||||||||||    
T  46163172 taatttgatgacgtggcaattactgccatacatgaaattccaattttgcc 46163221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 522 - 662
Target Start/End: Complemental strand, 24009915 - 24009775
Alignment:
Q  522 tgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgac 621  Q
    |||||| || ||||||| || |||| || |||| |  ||||||||||||||||| |||| |   || | |||||||||||||| ||||||||||||||||    
T  24009915 tgtaatcgccaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacatcactaatttgatgac 24009816  T
Q  622 gtggcaatcactgccacacgtgaaatttcaattttgccctt 662  Q
    ||||||||||||| | ||| ||||||| ||||||| |||||    
T  24009815 gtggcaatcactgtcgcacatgaaattccaattttaccctt 24009775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 653 - 717
Target Start/End: Complemental strand, 25648096 - 25648032
Alignment:
Q  653 ttttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||    
T  25648096 ttttgcccttaagaagaggacaaaatattgaagaaagaattggaaactcaggggtaaaattggaa 25648032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 517 - 656
Target Start/End: Original strand, 1103510 - 1103649
Alignment:
Q  517 gtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttg 616  Q
    ||||||||||| |||||||||| || |||| || |||| |  ||||||||||||||||| |||| |   || | |||||||||| || ||||||||||||    
T  1103510 gtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgtcatgtcactaatttg 1103609  T
Q  617 atgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    |||| ||||||||||||| || || ||||||| |||||||    
T  1103610 atgatgtggcaatcactgtcatacatgaaattccaatttt 1103649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 510 - 605
Target Start/End: Original strand, 28011405 - 28011500
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacg 605  Q
    ||||||||||||||||||||||||||||| || |||| || ||||||||||||||||||||||||| |||| |   || | |||||||||||||||    
T  28011405 aaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 28011500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 647 - 702
Target Start/End: Complemental strand, 46163279 - 46163224
Alignment:
Q  647 tttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaaccca 702  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  46163279 tttcaattttgcctttaagaagaggacaaaatattgaagaaagaattggaaaccca 46163224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 627 - 717
Target Start/End: Complemental strand, 4960812 - 4960719
Alignment:
Q  627 aatcactgccacacgtgaaatttcaatttt--gcccttaagaagaggacaaaatattgaag-aaagaattggaaacccaggggtgaatttggaa 717  Q
    |||||||||||||| |||||||||||||||  || ||||| |||||||||||||||||||| |||||||||||||| ||||||| || ||||||    
T  4960812 aatcactgccacacatgaaatttcaattttttgcacttaacaagaggacaaaatattgaagaaaagaattggaaactcaggggtaaaattggaa 4960719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 510 - 656
Target Start/End: Complemental strand, 13914453 - 13914308
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcac 609  Q
    |||||| |||| |||||| |||||||||| || |||| || || | |  ||||||||||||||||| |||| |   || | | |||||||||||||||||    
T  13914453 aaaattggtccatgtaatcgctaatcctggcaatttacccttgtattgtttaatcatttaaaatttcgtccctctccccactaaatcactgccacgtcac 13914354  T
Q  610 taatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    |||||||||||||| |||||||||| ||||| ||||||| |||||||    
T  13914353 taatttgatgacgt-gcaatcactgtcacacatgaaattccaatttt 13914308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 510 - 656
Target Start/End: Complemental strand, 17662236 - 17662090
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcac 609  Q
    |||||| || ||| |||| | |||||||| || |||| || |||| |  ||||||||||||||||| |||| |   || | |||||||||||||||||||    
T  17662236 aaaattggttcctttaatcgttaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctcttcccacttaatcactgccacgtcac 17662137  T
Q  610 taatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    ||||||||||| ||||||||||||| || || ||||||| |||||||    
T  17662136 taatttgatgaagtggcaatcactgacatacatgaaattccaatttt 17662090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 510 - 656
Target Start/End: Complemental strand, 19018015 - 19017869
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcac 609  Q
    |||||| |||| |||| | |||||||||| || |||| || |||| |  ||||||||||||||||| |||| |   || | |||||||||||| | ||||    
T  19018015 aaaattggtccatgtattcgctaatcctggcaatttacccttgcattatttaatcatttaaaattttgtccctcttcccacttaatcactgccgcatcac 19017916  T
Q  610 taatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    ||||||||||||||| ||||||||||||| | ||||||| |||||||    
T  19017915 taatttgatgacgtgacaatcactgccacgcatgaaattccaatttt 19017869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 510 - 656
Target Start/End: Original strand, 32917302 - 32917448
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcac 609  Q
    |||||| ||||||||||| ||||||||||||| ||||  | |||| |  ||||||||||||||||| |||  |   || | |||||||||||||| ||||    
T  32917302 aaaattggtccctgtaatcgctaatcctgacagtttactcttgcattgtttaatcatttaaaatttcgtctctctccccacttaatcactgccacatcac 32917401  T
Q  610 taatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    |||||||| ||||||||||| |||| ||||| ||| ||| |||||||    
T  32917402 taatttgacgacgtggcaattactgtcacacatgacattccaatttt 32917448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 468 - 608
Target Start/End: Complemental strand, 40714870 - 40714729
Alignment:
Q  468 aggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcat 566  Q
    ||||||| |||||||||| | | ||||||||||||| ||||||||| || |||| |||||| |||||||||| || |||| |  |||| |  ||||||||    
T  40714870 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcgctaatcctggcaatttacctttgcattgtttaatcat 40714771  T
Q  567 ttaaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    ||||||||| |||||| |||||| ||||||||| ||| ||||    
T  40714770 ttaaaatttcgtcctttgaccaacttaatcactaccaagtca 40714729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 469 - 608
Target Start/End: Original strand, 17188954 - 17189094
Alignment:
Q  469 ggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatt 567  Q
    |||||| |||||||||| | | ||||||||||||| ||||||||| || ||||||||||| |||||||||| || |||| || |||| |  |||||||||    
T  17188954 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattatttaatcatt 17189053  T
Q  568 taaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    |||||||| ||| || |||||  ||||||||| ||| ||||    
T  17189054 taaaatttcgtcatttgaccagcttaatcactaccaagtca 17189094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 468 - 599
Target Start/End: Complemental strand, 20760932 - 20760800
Alignment:
Q  468 aggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcat 566  Q
    ||||||| |||||||||| | | || |||||||||| ||||||||| || ||| ||||||| |||||||||| || |||| || |||| |  ||||||||    
T  20760932 aggcttaatgatgtgtttcgtccttacaattaggcgtcatttaaaaattagtctctgtaatcgctaatcctggcaatttacccttgcattgtttaatcat 20760833  T
Q  567 ttaaaatttggtccttggaccaaattaatcact 599  Q
    ||||||||| |||||| |||||| |||||||||    
T  20760832 ttaaaatttcgtcctttgaccaacttaatcact 20760800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 510 - 605
Target Start/End: Complemental strand, 24905521 - 24905427
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacg 605  Q
    ||||||||||| ||||||||||||||||| || |||| |||||||||||||||||||||||||||| |||| |   || | |||||||||||||||    
T  24905521 aaaattcgtcc-tgtaattgctaatcctggcaatttagccctgcaattgttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 24905427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 522 - 648
Target Start/End: Original strand, 43758876 - 43759002
Alignment:
Q  522 tgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgac 621  Q
    |||||| |||||| |||||| ||||  | |||| |  ||||||||||||||||| |||| |    | | ||||||||||||| |||||||||||||||||    
T  43758876 tgtaatcgctaattctgacaatttactcttgcattgtttaatcatttaaaatttcgtccctctctccacttaatcactgccatgtcactaatttgatgac 43758975  T
Q  622 gtggcaatcactgccacacgtgaaatt 648  Q
    ||||||||||||| ||||| |||||||    
T  43758976 gtggcaatcactgtcacacatgaaatt 43759002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 468 - 608
Target Start/End: Original strand, 31050949 - 31051090
Alignment:
Q  468 aggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcat 566  Q
    ||||||| |||||||||| | | |||||||||||||  |||||||| || ||| ||||||| |||||||||| || |||| |  |||| |  ||||||||    
T  31050949 aggcttaatgatgtgtttcgtccttgcaattaggcgttatttaaaaattagtctctgtaatcgctaatcctggcaatttacctttgcattgtttaatcat 31051048  T
Q  567 ttaaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    ||||||||| |||||| |||||| ||||||||| ||| ||||    
T  31051049 ttaaaatttcgtcctttgaccaacttaatcactaccaagtca 31051090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 476 - 608
Target Start/End: Complemental strand, 35041033 - 35040900
Alignment:
Q  476 tgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatt 574  Q
    |||||||||| | | ||| |||||| || ||||||||| || |||| |||||| ||||||||||||| |||| || |||| |  ||||||||||||||||    
T  35041033 tgatgtgtttcgtccttgtaattagccgtcatttaaaaattagtccatgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatt 35040934  T
Q  575 tggtccttggaccaaattaatcactgccacgtca 608  Q
    | |||||| |||||| ||||||||| ||| ||||    
T  35040933 tcgtcctttgaccaacttaatcactaccaagtca 35040900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 468 - 608
Target Start/End: Complemental strand, 49955774 - 49955633
Alignment:
Q  468 aggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcat 566  Q
    ||||||| |||||||||| | | ||||||||||||| ||||||||| || |||  |||||| | |||||||| || |||| || |||| |  ||||||||    
T  49955774 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctttgtaatcgttaatcctggcaatttacccttgcattgtttaatcat 49955675  T
Q  567 ttaaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    ||||||||| |||||| |||||| |||||||| |||| ||||    
T  49955674 ttaaaatttcgtcctttgaccaacttaatcaccgccaagtca 49955633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 510 - 656
Target Start/End: Original strand, 1841501 - 1841647
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcac 609  Q
    |||||| ||| | ||||| ||||||||||||| |||| || | || |  ||||||||||||||||| |||  |   || | ||||||||||||| |||||    
T  1841501 aaaattggtctccgtaatcgctaatcctgacaatttacccttacattgtttaatcatttaaaatttcgtcactctccccacttaatcactgccatgtcac 1841600  T
Q  610 taatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    ||||||||||| ||| |||||||||||| |  ||||||| |||||||    
T  1841601 taatttgatgatgtgacaatcactgccatatatgaaattccaatttt 1841647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 467 - 608
Target Start/End: Original strand, 8898515 - 8898657
Alignment:
Q  467 aaggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatca 565  Q
    |||||||| |||||||||| | | ||||||||||||| ||||||||| || ||| ||||||| |||||| |||  | ||||  | || | |  |||||||    
T  8898515 aaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtcactgtaatcgctaattctggtaatttactcttgtattgtttaatca 8898614  T
Q  566 tttaaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    |||||||||| |||||| |||||| |||||||||| |||||||    
T  8898615 tttaaaatttcgtcctttgaccaatttaatcactgtcacgtca 8898657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 467 - 608
Target Start/End: Complemental strand, 8898945 - 8898803
Alignment:
Q  467 aaggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatca 565  Q
    |||||||| |||||||||| | | ||| ||||||||| ||||||||| || ||| |||||||  ||||| |||||| |||| || |||| |  |||||||    
T  8898945 aaggcttaatgatgtgtttcgtccttgtaattaggcgtcatttaaaaattagtctctgtaatcactaatactgacaatttacccttgcattgtttaatca 8898846  T
Q  566 tttaaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    |||||||||| ||| || |||||| ||||||||| ||| ||||    
T  8898845 tttaaaatttcgtcatttgaccaacttaatcactaccaagtca 8898803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 522 - 656
Target Start/End: Original strand, 14879025 - 14879159
Alignment:
Q  522 tgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgac 621  Q
    |||||| ||||||| || || |||| || |||| |  ||||||||||||||||| |||| |   || | |||||||||| || |||||||||||||||||    
T  14879025 tgtaatcgctaatcttggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgtcatgtcactaatttgatgac 14879124  T
Q  622 gtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    |||||||||||||  | || ||||||| |||||||    
T  14879125 gtggcaatcactgagatacatgaaattccaatttt 14879159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 510 - 656
Target Start/End: Original strand, 35152385 - 35152531
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcac 609  Q
    |||||| |||||| |||| |||||| ||| || |||| || | || |  ||||||||||||||||| |||| |   || | ||||||||||| | |||||    
T  35152385 aaaattggtccctataatcgctaatactgccaatttacccttacattgtttaatcatttaaaattttgtccctctccccacttaatcactgcaatgtcac 35152484  T
Q  610 taatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    ||||||||||||||| |||||||| ||| || ||||||| |||||||    
T  35152485 taatttgatgacgtgacaatcactaccatacatgaaattccaatttt 35152531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 559 - 656
Target Start/End: Original strand, 42248564 - 42248661
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    ||||||||||||||||| |||| |   || | |||||||||||||||| ||||||||| ||| |||||||||||| ||| || ||||||| |||||||    
T  42248564 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtgactaatttgttgatgtggcaatcactaccatacatgaaattccaatttt 42248661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 468 - 608
Target Start/End: Complemental strand, 45750269 - 45750128
Alignment:
Q  468 aggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcat 566  Q
    ||||||| |||||||||| | | ||||||||||||| ||||||||| || |||  |||||| |||||||||  || ||||  | |||| |  ||||||||    
T  45750269 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctttgtaatcgctaatcctagcaatttactcttgcattgtttaatcat 45750170  T
Q  567 ttaaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    |||||||||  || || |||||| ||||||||||||||||||    
T  45750169 ttaaaatttcatcatttgaccaacttaatcactgccacgtca 45750128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 591 - 656
Target Start/End: Original strand, 48779240 - 48779305
Alignment:
Q  591 ttaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    ||||||||||||| |||||||||||||||||||| ||||||||| || || ||||||| |||||||    
T  48779240 ttaatcactgccatgtcactaatttgatgacgtgacaatcactgtcatacatgaaattccaatttt 48779305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 467 - 608
Target Start/End: Original strand, 45749840 - 45749982
Alignment:
Q  467 aaggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatca 565  Q
    |||||||| ||||||||||   | ||||||||||||| ||||||||| || |||  |||||| | ||||||||||| ||||  | |||| |  |||||||    
T  45749840 aaggcttaatgatgtgtttcatccttgcaattaggcgtcatttaaaaattagtctttgtaatcgttaatcctgacaatttacacttgcattgtttaatca 45749939  T
Q  566 tttaaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    |||||||||| |||||| ||| || ||||||||| ||| ||||    
T  45749940 tttaaaatttcgtcctttgacaaacttaatcactaccaagtca 45749982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 468 - 600
Target Start/End: Complemental strand, 12906086 - 12905953
Alignment:
Q  468 aggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcat 566  Q
    ||||||| |||||||||| | | |||||||| | |  ||||||||| || |||| |||||| |||||||||| || |||| || |||| |  ||||||||    
T  12906086 aggcttaatgatgtgtttcgtccttgcaatttgacatcatttaaaaattagtccatgtaatcgctaatcctggcaatttacccttgcattgtttaatcat 12905987  T
Q  567 ttaaaatttggtccttggaccaaattaatcactg 600  Q
    ||||||||| ||| || |||||| ||||||||||    
T  12905986 ttaaaatttcgtcatttgaccaacttaatcactg 12905953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 469 - 572
Target Start/End: Complemental strand, 17189277 - 17189173
Alignment:
Q  469 ggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatt 567  Q
    |||||| |||||||||| | | |||||||||| || ||||||||| || ||||||||||| |||||||||| || |||| || |||| |  |||||||||    
T  17189277 ggcttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatt 17189178  T
Q  568 taaaa 572  Q
    |||||    
T  17189177 taaaa 17189173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 466 - 608
Target Start/End: Complemental strand, 31058486 - 31058343
Alignment:
Q  466 gaaggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatc 564  Q
    ||||||||| |||||||||| | | |||||||||| |  ||||||||| || |||  |||||| | ||||| || || |||| || |||| |  ||||||    
T  31058486 gaaggcttaatgatgtgtttcgtccttgcaattagacatcatttaaaaattagtcaatgtaatcgataatcttggcaatttacccttgcattgtttaatc 31058387  T
Q  565 atttaaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    ||||||||||| ||  || |||||| ||||||||||||||||||    
T  31058386 atttaaaatttcgtattttgaccaacttaatcactgccacgtca 31058343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 559 - 608
Target Start/End: Original strand, 7371381 - 7371430
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    ||||| ||||||||||| |||||| |||||| ||||||||||||||||||    
T  7371381 ttaattatttaaaatttcgtcctttgaccaacttaatcactgccacgtca 7371430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 559 - 608
Target Start/End: Original strand, 35038546 - 35038595
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    ||||||||||||||||| |||||| |||||| | ||||||||||||||||    
T  35038546 ttaatcatttaaaatttcgtcctttgaccaactcaatcactgccacgtca 35038595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 510 - 605
Target Start/End: Complemental strand, 183577 - 183482
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacg 605  Q
    |||||| ||||||||||| |||||||||  || |||| ||||||| |  ||||||||||||||||| |||| |   || | |||||||||||||||    
T  183577 aaaattggtccctgtaatcgctaatcctagcaatttacccctgcattatttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 183482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 510 - 605
Target Start/End: Original strand, 25647926 - 25648021
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacg 605  Q
    |||||| ||||||||||| | |||||||| || |||| ||||||| |  ||||||||||||||||| |||| |   || | |||||||||||||||    
T  25647926 aaaattggtccctgtaatcgttaatcctggcaatttacccctgcattatttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 25648021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 469 - 575
Target Start/End: Original strand, 30326496 - 30326603
Alignment:
Q  469 ggcttattgatgtgtttagcctttgcaattaggcggcattt-aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatt 567  Q
    |||||| |||||||||| | | ||||||||||||| ||||| |||||| ||| ||||||| |||||| |||  | |||| || |||| |  |||||||||    
T  30326496 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctctgtaatcgctaattctggtaatttacccttgcattgtttaatcatt 30326595  T
Q  568 taaaattt 575  Q
    ||||||||    
T  30326596 taaaattt 30326603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 468 - 582
Target Start/End: Complemental strand, 32558534 - 32558419
Alignment:
Q  468 aggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcat 566  Q
    ||||||| |||||||||| | | || ||||||| || ||||||||| || || ||| |||| ||||||||||| | |||| || || |||  ||||||||    
T  32558534 aggcttaatgatgtgttttgtccttacaattagacgtcatttaaaaattagttcctataatcgctaatcctgataatttacccttgtaatgtttaatcat 32558435  T
Q  567 ttaaaatttggtcctt 582  Q
    ||||||||| ||||||    
T  32558434 ttaaaatttcgtcctt 32558419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 510 - 580
Target Start/End: Original strand, 40772549 - 40772619
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtcc 580  Q
    |||||| ||||||||||| ||||||||||||| ||||  | |||| |  ||||||||||||||||| ||||    
T  40772549 aaaattggtccctgtaatcgctaatcctgacaatttactcttgcattgtttaatcatttaaaatttcgtcc 40772619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 559 - 604
Target Start/End: Complemental strand, 4960846 - 4960801
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccac 604  Q
    ||||||||||||||||| |||||| || ||| ||||||||||||||    
T  4960846 ttaatcatttaaaatttcgtcctttgatcaacttaatcactgccac 4960801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 510 - 575
Target Start/End: Complemental strand, 36694634 - 36694569
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaattt 575  Q
    |||||| ||| ||||||| ||||||||||||| |||| || |||| |  |||||||||||||||||    
T  36694634 aaaattggtctctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaattt 36694569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 510 - 575
Target Start/End: Complemental strand, 36710735 - 36710670
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaattt 575  Q
    |||||| ||| ||||||| ||||||||||||| |||| || |||| |  |||||||||||||||||    
T  36710735 aaaattggtctctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaattt 36710670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 219; Significance: 1e-120; HSPs: 110)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 472 - 717
Target Start/End: Original strand, 9144769 - 9145015
Alignment:
Q  472 ttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaa 570  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  9144769 ttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcatttaa 9144868  T
Q  571 aatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaagaagag 670  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  9144869 aatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgtcacacatgaaatttcaattttgcccttaagaagag 9144968  T
Q  671 gacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||    
T  9144969 gacaaaatattgaagaaagaattggaaacccaggggtaaatttggaa 9145015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 467 - 717
Target Start/End: Original strand, 34837072 - 34837323
Alignment:
Q  467 aaggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatca 565  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||     
T  34837072 aaggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcg 34837171  T
Q  566 tttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaag 665  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||    
T  34837172 tttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgtcacacatgaaattccaattttgcccttaag 34837271  T
Q  666 aagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  34837272 aagaggacaaaatattgaagaaagaattggaaacccaggggtaaatttggaa 34837323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 469 - 717
Target Start/End: Complemental strand, 38012567 - 38012318
Alignment:
Q  469 ggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatt 567  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||    
T  38012567 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtt 38012468  T
Q  568 taaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaagaa 667  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||| ||||||||||||||||||    
T  38012467 taaaatttggtcctttgaccaaattaatcactgccacgtcactaatttgatgatgtggcaatcactgtcacacatgaaattccaattttgcccttaagaa 38012368  T
Q  668 gaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  38012367 gaggacaaaatattgaagaaagaattggaaacccaggggtaaatttggaa 38012318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 468 - 717
Target Start/End: Original strand, 42738030 - 42738280
Alignment:
Q  468 aggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcat 566  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||| |||||||||||||| |    
T  42738030 aggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgttaatcctggcattttaaccttgcaattgttaatcgt 42738129  T
Q  567 ttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaaga 666  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||    
T  42738130 ttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgtcacacatgaaattccaattttgcccttaaga 42738229  T
Q  667 agaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    |||||||||||||||||||||||||||||||| ||| |||| |||||||||    
T  42738230 agaggacaaaatattgaagaaagaattggaaatccaagggtaaatttggaa 42738280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 468 - 717
Target Start/End: Complemental strand, 32950540 - 32950290
Alignment:
Q  468 aggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcat 566  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| |    
T  32950540 aggcttattgatgtgtttagcccttgcaattaggtggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgt 32950441  T
Q  567 ttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaaga 666  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| | ||||| |||||||||||||||||    
T  32950440 ttaaaatttggtccttggaccaaattaatcactgccacatcactaatttgatgacgtggcaatcactgtcacacataaaattacaattttgcccttaaga 32950341  T
Q  667 agaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    |||||||||||| ||||||||||||||| |||||||||||| |||||||||    
T  32950340 agaggacaaaatgttgaagaaagaattgaaaacccaggggtaaatttggaa 32950290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 469 - 714
Target Start/End: Original strand, 9400519 - 9400765
Alignment:
Q  469 ggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatt 567  Q
    |||||| ||||||| |||| | ||||||||||| | ||||||||| ||||||||||||||||||||||||| || |||| || |||||||||||||||||    
T  9400519 ggcttaatgatgtgattagtccttgcaattaggtgtcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatt 9400618  T
Q  568 taaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaagaa 667  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| ||||  ||||||| ||||||||||||||||||    
T  9400619 taaaatttggtccttggaccaacttaatcactgtcacgtcactaatttgatgacgtggcaatcactgtcacagatgaaattccaattttgcccttaagaa 9400718  T
Q  668 gaggacaaaatattgaagaaagaattggaaacccaggggtgaatttg 714  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||    
T  9400719 gaggacaaaatattgaagaaagaattggaaacccaggggtaaatttg 9400765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 162; E-Value: 4e-86
Query Start/End: Original strand, 469 - 717
Target Start/End: Original strand, 4982726 - 4982975
Alignment:
Q  469 ggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatt 567  Q
    |||||| ||||||| |||| | |||||||||| ||  |||||||| ||||||| |||||||||||||| || || |||| || |||||||||||||||||    
T  4982726 ggcttaatgatgtgattagtccttgcaattagacgtaatttaaaaattcgtccatgtaattgctaatcttggcaatttagccttgcaattgttaatcatt 4982825  T
Q  568 taaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaagaa 667  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||    
T  4982826 taaaatttggtccttggaccaacttaatcactgcctcgtcactaatttgatgacgtggcaatcactgtcacacatgaaattccaattttgcccttaagaa 4982925  T
Q  668 gaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    |||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  4982926 gaggacaaaatattgaagaaagaattagaaacccaggggtaaatttggaa 4982975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 491 - 714
Target Start/End: Original strand, 33247296 - 33247519
Alignment:
Q  491 ttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaa 589  Q
    ||||||||||| | ||||||||| ||||||||||||||||||||||||| || |||| || ||||||||||||||||||||| |||||||||||||||||    
T  33247296 ttgcaattaggtgtcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaaa-tttggtccttggaccaa 33247394  T
Q  590 attaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaag 689  Q
     |||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  33247395 cttaatcactgccacgtcactaatttgatgacgtggcaatcactgtcacagatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaag 33247494  T
Q  690 aattggaaacccaggggtgaatttg 714  Q
    |||||||||||||||||| ||||||    
T  33247495 aattggaaacccaggggtaaatttg 33247519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 467 - 717
Target Start/End: Complemental strand, 22567185 - 22566947
Alignment:
Q  467 aaggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatca 565  Q
    |||||||| ||||||| |||| | ||||||||||||| ||||||||| ||||||||||||||||||||||||             |||||||||||||||    
T  22567185 aaggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatcct-------------tgcaattgttaatca 22567099  T
Q  566 tttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaag 665  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||    
T  22567098 tttaaaatttggtccttggaccaacttaatcactgccacgtcaataatttgatgacgtggcaatcactgtcacacatgaaattccaattttgcccttaag 22566999  T
Q  666 aagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    || ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  22566998 aaaaggacaaaatattgaagaaagaattggaaacccaggggtaaatttggaa 22566947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 138; E-Value: 9e-72
Query Start/End: Original strand, 477 - 717
Target Start/End: Complemental strand, 27934907 - 27934680
Alignment:
Q  477 gatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaattt 575  Q
    |||||| |||| | ||||||||||||| ||||||||| ||||||||||||||||||||||||             |||||||||||||||||||||||||    
T  27934907 gatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatcct-------------tgcaattgttaatcatttaaaattt 27934821  T
Q  576 ggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaagaagaggacaa 675  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||| ||||| ||||||| ||||||||||||||||||||||||||    
T  27934820 ggtccttggaccaacttaatcactgccatgtcactaatttgatgacgtg-caatcactgtcacacatgaaattccaattttgcccttaagaagaggacaa 27934722  T
Q  676 aatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    |||||||||||||||||||||||||||||||| || ||||||    
T  27934721 aatattgaagaaagaattggaaacccaggggtaaaattggaa 27934680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 510 - 717
Target Start/End: Original strand, 49879249 - 49879456
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcac 609  Q
    |||||| |||||||||||||||||||||  ||   || || ||||||  ||||||||||||||||| |||||| |||||| ||||||||||||| |||||    
T  49879249 aaaattggtccctgtaattgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgaccaatttaatcactgccatgtcac 49879348  T
Q  610 taatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtga 709  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  49879349 taatttgatgacgtggcaatcactgccacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaa 49879448  T
Q  710 atttggaa 717  Q
    | ||||||    
T  49879449 aattggaa 49879456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 510 - 717
Target Start/End: Original strand, 44967111 - 44967318
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcac 609  Q
    |||||| ||| ||||| | ||||||||| |||   || || ||||||  ||||||||||||||||| |||||| |||||| |||||||||||||||||||    
T  44967111 aaaattggtctctgtattcgctaatccttacaaactagccttgcaatcattaatcatttaaaatttagtcctttgaccaacttaatcactgccacgtcac 44967210  T
Q  610 taatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtga 709  Q
    |||||||||||||||||||||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  44967211 taatttgatgacgtggcaatcactgccaaacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaa 44967310  T
Q  710 atttggaa 717  Q
    | ||||||    
T  44967311 aattggaa 44967318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 559 - 717
Target Start/End: Original strand, 17356016 - 17356174
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| ||| || |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  17356016 ttaatcatttaaaatttcgtcatttgaccaacttaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacatgaaattccaattttgc 17356115  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  17356116 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaaattggaa 17356174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 559 - 717
Target Start/End: Complemental strand, 7452140 - 7451982
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| |||||||||    
T  7452140 ttaatcatttaaaatttagtcctttgaccaacttaatcactgccacgtcactaatttgatgacgtggcaatcactgccaaacatgaaattccaattttgc 7452041  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||    
T  7452040 ccttaagaagaggacaaaatattgaagaaagaattggaaactcaggggtaaaattggaa 7451982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 559 - 717
Target Start/End: Complemental strand, 24711417 - 24711259
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| ||| || |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||    
T  24711417 ttaatcatttaaaatttcgtcatttgaccaatttaatcactgccacgtcactaatttgatgacatggcaatcactgccacacatgaaattccaattttgc 24711318  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| || ||||||    
T  24711317 ccttaagaagatgacaaaatattgaagaaagaattggaaacccaggggtaaaattggaa 24711259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 559 - 717
Target Start/End: Original strand, 34765471 - 34765629
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| |||||| || ||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  34765471 ttaatcatttaaaatttcgtcctttgatcaacttaatcactgtcacgtcactaatttgatgacgtggcaatcactgccacacatgaaattccaattttgc 34765570  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| || ||||||    
T  34765571 ccttaagaagaggacaaaatattgaagaaagaattggaaacccagtggtaaaattggaa 34765629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 510 - 716
Target Start/End: Complemental strand, 46661300 - 46661094
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcac 609  Q
    |||||| ||||||||| || ||||||||  ||   || || ||||||  ||||||||||||||||| |||||| |||||| |||||||||||||||||||    
T  46661300 aaaattggtccctgtatttactaatcctcgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcac 46661201  T
Q  610 taatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtga 709  Q
    |||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||| || |||||||||| ||||||||||||||||||||||||| |    
T  46661200 taatttgatgacgtggcaatcactaccacacatgaaattccaattttgcccttaagaatagaacaaaatattaaagaaagaattggaaacccaggggtaa 46661101  T
Q  710 atttgga 716  Q
    |||||||    
T  46661100 atttgga 46661094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 560 - 717
Target Start/End: Complemental strand, 23613614 - 23613457
Alignment:
Q  560 taatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcc 659  Q
    |||||||||||||||| || ||| |||||| ||||||||| |||||||||||||||||||||||| |||||||||||| || ||||||||||||||||||    
T  23613614 taatcatttaaaatttagttctttgaccaacttaatcactaccacgtcactaatttgatgacgtgacaatcactgccaaacatgaaatttcaattttgcc 23613515  T
Q  660 cttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  23613514 cttaagaagaggacaaaatattgaagaaagaattggaaatccaggggtaaatttggaa 23613457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 510 - 707
Target Start/End: Complemental strand, 37248591 - 37248394
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcac 609  Q
    |||||| ||||||||||| |||||||||  ||   ||  | ||||||  |||||||||| |||||| |||||| |||||| ||||||| |||||||||||    
T  37248591 aaaattggtccctgtaatcgctaatccttgcaaactagtcttgcaatcattaatcattttaaatttcgtcctttgaccaatttaatcattgccacgtcac 37248492  T
Q  610 taatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggt 707  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  37248491 taatttgatgacgtggcaatcactgccacacatgaaattccaattttgcccttaagaagaggacaaaataatgaagaaagaattggaaacccaggggt 37248394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 510 - 717
Target Start/End: Original strand, 43155571 - 43155776
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcac 609  Q
    |||||| ||||||||| | |||||||||  ||   || || |||||| |||||||||||||||||| ||| || |||||| |||||||||||||||||||    
T  43155571 aaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcgttaatcatttaaaatttagtcatttgaccaacttaatcactgccacgtcac 43155670  T
Q  610 taatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtga 709  Q
    ||||||||||| |||||||||||||||| || ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| |    
T  43155671 taatttgatgatgtggcaatcactgccaaacatgaaatttcaattttgcccttaagaagaggac--aatattgaagaaagaattggaaacccaggggtaa 43155768  T
Q  710 atttggaa 717  Q
    | ||||||    
T  43155769 aattggaa 43155776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 510 - 717
Target Start/End: Original strand, 50418710 - 50418917
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcac 609  Q
    |||||| ||||||||||| | |||||||  ||   || || ||||||  ||||||||||||||||| |||||| |||||| |||||||||||||||||||    
T  50418710 aaaattggtccctgtaatcgttaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgaccaatttaatcactgccacgtcac 50418809  T
Q  610 taatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtga 709  Q
    ||||||||||||||| ||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| |||| |||| |    
T  50418810 taatttgatgacgtgacaatcactgccacacatgaaattccaattttgcccttaaggagaggacaaaatattgaagaaagaattggaatcccaagggtaa 50418909  T
Q  710 atttggaa 717  Q
    | ||||||    
T  50418910 aattggaa 50418917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 468 - 602
Target Start/End: Original strand, 51203608 - 51203743
Alignment:
Q  468 aggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcat 566  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| |    
T  51203608 aggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgt 51203707  T
Q  567 ttaaaatttggtccttggaccaaattaatcactgcc 602  Q
    ||||||||||||||||||||||||||||||||||||    
T  51203708 ttaaaatttggtccttggaccaaattaatcactgcc 51203743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 559 - 717
Target Start/End: Complemental strand, 16006143 - 16005986
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| ||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| |||||||||    
T  16006143 ttaatcatttaaaatttagtccttt-accaacttaatcactgccacgtcactaatttgatgacgtggcaatcactgccaaacatgaaattccaattttgc 16006045  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| || ||||||    
T  16006044 ccttaagaagaggacaaaatattgaagaaagaattggaaatccaggggtaaaattggaa 16005986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 559 - 717
Target Start/End: Original strand, 35028089 - 35028247
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| ||| || |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||    
T  35028089 ttaatcatttaaaatttcgtcttttgaccaacttaatcaccgccacgtcactaatttgatgacgtggcaatcactgccacacatgaaattccaactttgc 35028188  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||    
T  35028189 ccttaagaagaggacaaaatattgaagaaagaattggaaaccctggggtaaaattggaa 35028247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 559 - 717
Target Start/End: Original strand, 37976244 - 37976402
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| |||||| |||||| ||||||| |||||||||||||||| |||||||||||||||||| |||||  ||||||| |||||||||    
T  37976244 ttaatcatttaaaatttcgtcctttgaccaacttaatcattgccacgtcactaattcgatgacgtggcaatcactaccacatatgaaattccaattttgc 37976343  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  37976344 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaaattggaa 37976402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 559 - 707
Target Start/End: Complemental strand, 53702149 - 53702001
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| ||| || |||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||| |||    
T  53702149 ttaatcatttaaaatttcgtcatttgaccaacttaatcaatgccacgtcactaatttgatgacgtggcaatcactgtcacacatgaaattccaattctgc 53702050  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggt 707  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  53702049 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggt 53702001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 559 - 717
Target Start/End: Original strand, 36008935 - 36009093
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| |||||| |||||| ||||||||| ||||||||||||||||||||||||||||||||||||| || ||||||| |||||||||    
T  36008935 ttaatcatttaaaatttagtcctttgaccaacttaatcactaccacgtcactaatttgatgacgtggcaatcactgccaaacatgaaattccaattttgc 36009034  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    |||||||||||||||||||||||||||||||||||| |||  ||||||| || ||||||    
T  36009035 ccttaagaagaggacaaaatattgaagaaagaattgaaaaatcaggggtaaaattggaa 36009093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 545 - 717
Target Start/End: Complemental strand, 18831668 - 18831497
Alignment:
Q  545 taaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtga 644  Q
    ||||| ||||||  |||||||||||||||||  || || |||||| |||||||| ||||||||||| |||||||||||| |||||||||||||||| |||    
T  18831668 taaccttgcaatcattaatcatttaaaatttcatcatttgaccaacttaatcaccgccacgtcacttatttgatgacgtcgcaatcactgccacacatga 18831569  T
Q  645 aatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || ||||||    
T  18831568 aattccaattttgcccttaagaagaggacaaaatattgaagaaagaattgg-aacccaggggtaaaattggaa 18831497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 559 - 707
Target Start/End: Original strand, 53129597 - 53129745
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| || ||| |||||| ||||||||||| || ||||||||||||||||||| ||||||||||||||| ||||||| |||||||||    
T  53129597 ttaatcatttaaaatttcgttctttgaccaacttaatcactgcaacttcactaatttgatgacgtgacaatcactgccacacatgaaattccaattttgc 53129696  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggt 707  Q
    ||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  53129697 ccttaagaagatgacaaaatattgaagaaagaattggaaaccccggggt 53129745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 559 - 698
Target Start/End: Complemental strand, 14802072 - 14801934
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| |||||| |||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||| |||||||||    
T  14802072 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacatcactaatttg-tgacgtggcaatcactgccacacatgaaattccaattttgc 14801974  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaa 698  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  14801973 ccttaagaagagaacaaaatattgaagaaagaattggaaa 14801934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 563 - 717
Target Start/End: Original strand, 15507768 - 15507922
Alignment:
Q  563 tcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgccctt 662  Q
    |||||| |||||| |||||| |||||| ||||||| || ||||||||||||||||||||||||||||||||||||||  | ||||| |||||||||||||    
T  15507768 tcatttcaaatttcgtcctttgaccaacttaatcattgtcacgtcactaatttgatgacgtggcaatcactgccacatataaaattccaattttgccctt 15507867  T
Q  663 aagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| || ||||||    
T  15507868 aagaagaggacaaaatattgaagaaagaattggaaactcaggggtaaaattggaa 15507922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 559 - 707
Target Start/End: Complemental strand, 52909590 - 52909442
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||| ||||||||||| |||||| |||||| |||||||||| |||||||| |||| ||||| |||||||||||  |||||| ||||||| |||||||||    
T  52909590 ttaattatttaaaatttcgtcctttgaccaacttaatcactgtcacgtcacaaattcgatgatgtggcaatcacaaccacacatgaaattccaattttgc 52909491  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggt 707  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  52909490 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggt 52909442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 467 - 605
Target Start/End: Complemental strand, 42738430 - 42738291
Alignment:
Q  467 aaggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatca 565  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  42738430 aaggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatca 42738331  T
Q  566 tttaaaatttggtccttggaccaaattaatcactgccacg 605  Q
    |||||||||| |||| |   || | |||||||||||||||    
T  42738330 tttaaaatttcgtccctctccccacttaatcactgccacg 42738291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 510 - 717
Target Start/End: Complemental strand, 51692905 - 51692698
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcac 609  Q
    |||||| ||||||||| | |||||||||  ||   || || ||||||  ||||||||||||||||| |||||| |||||| |||||||||| || |||||    
T  51692905 aaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgaccaacttaatcactgtcatgtcac 51692806  T
Q  610 taatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtga 709  Q
    ||||| |||||||||||||| |||  ||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| |    
T  51692805 taattcgatgacgtggcaattactatcacacatgaaattctaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaatccatgggtaa 51692706  T
Q  710 atttggaa 717  Q
    | ||||||    
T  51692705 aattggaa 51692698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 571 - 717
Target Start/End: Complemental strand, 24411683 - 24411537
Alignment:
Q  571 aatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaagaagag 670  Q
    ||||| |||||| |||||| ||||||||| |||||||||||||||||||| ||||||||||||||||| | ||||||| ||||||||||||||||||||     
T  24411683 aatttcgtcctttgaccaacttaatcactaccacgtcactaatttgatgatgtggcaatcactgccacccatgaaattccaattttgcccttaagaagat 24411584  T
Q  671 gacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    ||||||||||||||||||||||||||||  ||||||| || ||||||    
T  24411583 gacaaaatattgaagaaagaattggaaattcaggggtaaaattggaa 24411537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 559 - 707
Target Start/End: Original strand, 54086786 - 54086934
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| |||||| |||||| |||||||||||||||||||||||| |||||| || |||||||| |||||  ||||||| |||||||||    
T  54086786 ttaatcatttaaaattttgtcctttgaccaacttaatcactgccacgtcactaattcgatgacatgacaatcactaccacatatgaaattccaattttgc 54086885  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggt 707  Q
    |||||||||||||| ||||||||||||||||||||| ||| ||| ||||    
T  54086886 ccttaagaagaggataaaatattgaagaaagaattgaaaagccaagggt 54086934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 467 - 605
Target Start/End: Complemental strand, 9145165 - 9145026
Alignment:
Q  467 aaggcttattgatgtgtttagcctttgcaattaggcggcatttaaaatt-cgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatca 565  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  9145165 aaggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaatgcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatca 9145066  T
Q  566 tttaaaatttggtccttggaccaaattaatcactgccacg 605  Q
    |||||||||| |||| |   || | |||||||||||||||    
T  9145065 tttaaaatttcgtccctctccccacttaatcactgccacg 9145026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 467 - 575
Target Start/End: Original strand, 32950140 - 32950249
Alignment:
Q  467 aaggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatca 565  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  32950140 aaggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtcccagtaattgctaatcctggcattttaaccctgcaattgttaatca 32950239  T
Q  566 tttaaaattt 575  Q
    ||||||||||    
T  32950240 tttaaaattt 32950249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 468 - 605
Target Start/End: Complemental strand, 34837472 - 34837334
Alignment:
Q  468 aggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcat 566  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||||| |    
T  34837472 aggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtctctgtaattgctaatcctggcattttaaccctgcaattgttaatcgt 34837373  T
Q  567 ttaaaatttggtccttggaccaaattaatcactgccacg 605  Q
    ||||||||| |||| |   || | |||||||||||||||    
T  34837372 ttaaaatttcgtccctctccccacttaatcactgccacg 34837334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 469 - 575
Target Start/End: Original strand, 38012170 - 38012277
Alignment:
Q  469 ggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatt 567  Q
    |||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||    
T  38012170 ggcttattgatgtgttcagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtt 38012269  T
Q  568 taaaattt 575  Q
    ||||||||    
T  38012270 taaaattt 38012277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 559 - 717
Target Start/End: Original strand, 35508332 - 35508489
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| ||| ||| ||||| |||||||||| ||||||||||||| || |||||||||| |||| |||||| | ||||| ||||||| |    
T  35508332 ttaatcatttaaaattttgtctttg-accaacttaatcactgtcacgtcactaattcgaagacgtggcaaacactaccacacattaaattccaattttac 35508430  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    |||||||||| ||||||||||||||||||||||||| ||| |||||||| || ||||||    
T  35508431 ccttaagaagcggacaaaatattgaagaaagaattgaaaatccaggggtaaaattggaa 35508489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 467 - 608
Target Start/End: Original strand, 54858558 - 54858700
Alignment:
Q  467 aaggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatca 565  Q
    |||||||| |||||||||| | | ||||||||||||| ||||||||| || ||||||||||| ||||||||||||| |||| || |||| |  |||||||    
T  54858558 aaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatca 54858657  T
Q  566 tttaaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    |||||||||| |||||| |||||| ||||||||||||||||||    
T  54858658 tttaaaatttcgtcctttgaccaacttaatcactgccacgtca 54858700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 510 - 656
Target Start/End: Original strand, 52909295 - 52909441
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcac 609  Q
    |||||| ||| ||||||| ||||||||||||| |||| || |||| |  ||||||||||||||||| |||| |   || | ||||||||||||| |||||    
T  52909295 aaaattggtcactgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtccatctccccacttaatcactgccatgtcac 52909394  T
Q  610 taatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    ||||||||||| |||||||||||||||| || |||||||||||||||    
T  52909395 taatttgatgatgtggcaatcactgccatacatgaaatttcaatttt 52909441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 522 - 656
Target Start/End: Original strand, 14801790 - 14801924
Alignment:
Q  522 tgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgac 621  Q
    |||||| ||||||||||||| |||| || || | |  ||||||||||||||||| |||| |   || | |||||||||||||||||||||||||||||||    
T  14801790 tgtaatcgctaatcctgacaatttacccttgtattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaatttgatgac 14801889  T
Q  622 gtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    ||||||||||||| ||||| ||||||| |||||||    
T  14801890 gtggcaatcactgtcacacatgaaattccaatttt 14801924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 467 - 589
Target Start/End: Complemental strand, 27149423 - 27149301
Alignment:
Q  467 aaggcttattgatgtgtttagcctttgcaattaggcggcatttaaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcat 566  Q
    |||||||| |||||||||| | | ||||||||||||| ||||||||||| |||||||||||||||||||||| || |||| || |||| |  ||||||||    
T  27149423 aaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaattagtccctgtaattgctaatcctggcaatttacccttgcattgtttaatcat 27149324  T
Q  567 ttaaaatttggtccttggaccaa 589  Q
    ||||||||| |||||| ||||||    
T  27149323 ttaaaatttcgtcctttgaccaa 27149301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 642 - 707
Target Start/End: Complemental strand, 13058260 - 13058195
Alignment:
Q  642 tgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggt 707  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13058260 tgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggt 13058195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 510 - 656
Target Start/End: Original strand, 24411400 - 24411546
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcac 609  Q
    |||||| ||||||||||| ||||| ||||||| |||| || |||| |  |||||||||||||  || |||| |   || | ||||||||| |||||||||    
T  24411400 aaaattggtccctgtaatcgctaaccctgacaatttacccttgcattgtttaatcatttaaagattcgtccctcttcccacttaatcactcccacgtcac 24411499  T
Q  610 taatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    ||||||||||||||||||||||||| ||||| ||||||| |||||||    
T  24411500 taatttgatgacgtggcaatcactgtcacacatgaaattccaatttt 24411546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 467 - 608
Target Start/End: Complemental strand, 27069338 - 27069196
Alignment:
Q  467 aaggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatca 565  Q
    |||||||| |||||||||| | | ||||||||||||| ||||||||| || |||||||||||||||||||||| || |||| || |||| |  |||||||    
T  27069338 aaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaattgctaatcctggcaatttacccttgcattgtttaatca 27069239  T
Q  566 tttaaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    |||||||||| ||| || |||||| |||||||| |||| ||||    
T  27069238 tttaaaatttcgtcttttgaccaatttaatcaccgccaagtca 27069196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 468 - 608
Target Start/End: Original strand, 27068909 - 27069050
Alignment:
Q  468 aggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcat 566  Q
    |||||||  ||||||||| | | ||||||||||||  ||||||||| || ||||||||||| |||||||||| || |||| || |||| |  ||||||||    
T  27068909 aggcttaaggatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcat 27069008  T
Q  567 ttaaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    ||||||||| |||||| |||||| ||||||||||||||||||    
T  27069009 ttaaaatttcgtcctttgaccaacttaatcactgccacgtca 27069050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 468 - 608
Target Start/End: Original strand, 52573227 - 52573368
Alignment:
Q  468 aggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcat 566  Q
    ||||||| |||||||||| | ||||||||||||||| ||||||||| || || |||||||| |||||||||| || ||||  | | || |  ||||||||    
T  52573227 aggcttaatgatgtgtttcgtctttgcaattaggcgtcatttaaaaattagtacctgtaatcgctaatcctggcaatttactcttacattgtttaatcat 52573326  T
Q  567 ttaaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    ||||||||| |||||| |||||| ||||||||||||||||||    
T  52573327 ttaaaatttcgtcctttgaccaacttaatcactgccacgtca 52573368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 469 - 604
Target Start/End: Complemental strand, 10408315 - 10408179
Alignment:
Q  469 ggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatt 567  Q
    |||||| || ||||||| | | ||||||||||||| ||||||||| || ||||||||||| |||||||||| || |||| || |||| |  |||||||||    
T  10408315 ggcttaatgttgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatt 10408216  T
Q  568 taaaatttggtccttggaccaaattaatcactgccac 604  Q
    |||||||| |||||| |||||| ||||||||||||||    
T  10408215 taaaatttcgtcctttgaccaacttaatcactgccac 10408179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 472 - 602
Target Start/End: Complemental strand, 6237245 - 6237114
Alignment:
Q  472 ttattgatgtgtttagcctttgcaattaggcggcatttaaaattc-gtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaa 570  Q
    |||||||||| |||||   || |||||||||| |||||||||||  ||| ||||||||||||||||||| | |||| || | ||||||||||||||||||    
T  6237245 ttattgatgtctttagttcttacaattaggcgtcatttaaaatttagtctctgtaattgctaatcctgagaatttacccttacaattgttaatcatttaa 6237146  T
Q  571 aatttggtccttggaccaaattaatcactgcc 602  Q
    |||||||| |||| ||||| ||||| ||||||    
T  6237145 aatttggttcttgaaccaacttaatgactgcc 6237114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 467 - 605
Target Start/End: Original strand, 27934530 - 27934669
Alignment:
Q  467 aaggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatca 565  Q
    |||||||| ||||||| |||| | ||||||||||| | | ||||||| || |||||||||||||||||||||| || |||| || |||||||||||||||    
T  27934530 aaggcttaatgatgtgattagtccttgcaattaggggtcgtttaaaaatttgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatca 27934629  T
Q  566 tttaaaatttggtccttggaccaaattaatcactgccacg 605  Q
    |||||||||| |||| |   || | |||||||||||||||    
T  27934630 tttaaaatttcgtccctctccccacttaatcactgccacg 27934669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 522 - 656
Target Start/End: Complemental strand, 34765754 - 34765620
Alignment:
Q  522 tgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgac 621  Q
    |||||| |||||||||| || |||| |  |||| |  ||||||||||||||||| |||| |   || | ||||||||||||||||||||||||||| |||    
T  34765754 tgtaatcgctaatcctggcaatttacctttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaatttgaggac 34765655  T
Q  622 gtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    ||||||||||||| ||||| ||||||| |||||||    
T  34765654 gtggcaatcactgtcacacatgaaattccaatttt 34765620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 471 - 575
Target Start/End: Complemental strand, 9400914 - 9400809
Alignment:
Q  471 cttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcattta 569  Q
    |||| ||||||| |||| | ||||||||||| | | ||||||| ||||||||||||||||||||||||| || |||| || |||||||||||||||||||    
T  9400914 cttaatgatgtgattagtccttgcaattaggggtcgtttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcattta 9400815  T
Q  570 aaattt 575  Q
    ||||||    
T  9400814 aaattt 9400809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 491 - 656
Target Start/End: Complemental strand, 15508078 - 15507913
Alignment:
Q  491 ttgcaattaggcggcatttaaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaa 590  Q
    ||||||||||| | | ||||||| | |||| |||||| ||||||||||||| |||| |  ||||    ||||||||||||||||| |||  |   || |     
T  15508078 ttgcaattaggggtcgtttaaaaattgtccttgtaatcgctaatcctgacaatttaccattgcatggtttaatcatttaaaatttcgtctctctccccac 15507979  T
Q  591 ttaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    |||||||||||| ||||||||||||||||||||||||||||||  ||||| ||||||| |||||||    
T  15507978 ttaatcactgccgcgtcactaatttgatgacgtggcaatcactatcacacatgaaattccaatttt 15507913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 510 - 662
Target Start/End: Complemental strand, 54087081 - 54086929
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcac 609  Q
    |||||| ||||||||||| | ||||| ||||| |||| || |||| |  ||||||||||||||||| |||  |   || | |||||||||  || |||||    
T  54087081 aaaattggtccctgtaatcgttaatcatgacaatttacccttgcattgtttaatcatttaaaatttcgtctctctccccacttaatcactaacatgtcac 54086982  T
Q  610 taatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgccctt 662  Q
    ||||||||||||||||||||||||| || || ||||||||||||||| |||||    
T  54086981 taatttgatgacgtggcaatcactgtcatacatgaaatttcaattttaccctt 54086929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 521 - 648
Target Start/End: Original strand, 53701865 - 53701992
Alignment:
Q  521 ctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatga 620  Q
    |||||||  |||||||||||| |||| || |||| |  |||||||||||||||||  ||| |   || | ||||||||||||||||||||||||||||||    
T  53701865 ctgtaatctctaatcctgacaatttatccttgcattgtttaatcatttaaaatttcttccctctccccacttaatcactgccacgtcactaatttgatga 53701964  T
Q  621 cgtggcaatcactgccacacgtgaaatt 648  Q
    ||||| |||||||| ||||| |||||||    
T  53701965 cgtggtaatcactgtcacacatgaaatt 53701992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 466 - 603
Target Start/End: Original strand, 3032579 - 3032717
Alignment:
Q  466 gaaggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatc 564  Q
    ||||||||| |||||||||| | | ||||||||||||| ||||||||| || |||| |||||| |||||||||| || |||| || |||| |  ||||||    
T  3032579 gaaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccttgtaatcgctaatcctggcaatttacccttgcattgtttaatc 3032678  T
Q  565 atttaaaatttggtccttggaccaaattaatcactgcca 603  Q
    ||||||||||| ||| || |||||| |||||||| ||||    
T  3032679 atttaaaatttcgtcatttgaccaacttaatcaccgcca 3032717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 510 - 620
Target Start/End: Complemental strand, 13058368 - 13058258
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcac 609  Q
    |||||| ||||||||| | |||||||||  ||   || || ||||||  ||||||||||||||||| |||||| |||||| |||||||||||||||||||    
T  13058368 aaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttagtcctttgaccaacttaatcactgccacgtcac 13058269  T
Q  610 taatttgatga 620  Q
    |||||||||||    
T  13058268 taatttgatga 13058258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 491 - 608
Target Start/End: Complemental strand, 45463477 - 45463359
Alignment:
Q  491 ttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaa 589  Q
    ||||||||||||| ||||||||| || |||||||||||||||||||||| || | || || |||| |  ||||||||||||||||| || ||| ||||||    
T  45463477 ttgcaattaggcgtcatttaaaaattagtccctgtaattgctaatcctggcaatctacccttgcattgtttaatcatttaaaattttgttctttgaccaa 45463378  T
Q  590 attaatcactgccacgtca 608  Q
     ||||||||| ||||||||    
T  45463377 cttaatcactaccacgtca 45463359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 467 - 608
Target Start/End: Complemental strand, 54858988 - 54858846
Alignment:
Q  467 aaggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatca 565  Q
    |||||||| |||||||||| | | ||||||||||||| ||||||||| || |||| |||||| | |||||||| || |||| || |||| |  |||||||    
T  54858988 aaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcgttaatcctggcaatttacccttgcattgtttaatca 54858889  T
Q  566 tttaaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    |||||||||| |||||| |||||| ||||||||| ||| ||||    
T  54858888 tttaaaatttcgtcctttgaccaacttaatcactaccaagtca 54858846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 591 - 656
Target Start/End: Complemental strand, 35028303 - 35028238
Alignment:
Q  591 ttaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||| |||||||    
T  35028303 ttaatcactgccacgtcactaatttgatgacgtggcaatcactttcacacatgaaattccaatttt 35028238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 469 - 608
Target Start/End: Original strand, 10407889 - 10408029
Alignment:
Q  469 ggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatt 567  Q
    |||||| |||||||||| | | ||||||||||| | ||||||||| ||  |||||||||| ||||||||||||| |||| || |||| |  |||||||||    
T  10407889 ggcttaatgatgtgtttcgtccttgcaattaggagtcatttaaaaattactccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatt 10407988  T
Q  568 taaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    |||||||| |||||| || ||| ||||||||| ||| ||||    
T  10407989 taaaatttcgtcctttgatcaacttaatcactaccaagtca 10408029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 471 - 608
Target Start/End: Original strand, 45463075 - 45463213
Alignment:
Q  471 cttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcattta 569  Q
    |||| |||||||||| | | ||||||||||||| ||||||||| || ||| ||||||| |||||||||| || |||| || |||| |  |||||||||||    
T  45463075 cttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctctgtaatcgctaatcctggcaatttacccttgcattgtttaatcattta 45463174  T
Q  570 aaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    |||||| ||| || |||||| ||||||||| ||| ||||    
T  45463175 aaatttcgtcatttgaccaacttaatcactaccaagtca 45463213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 469 - 605
Target Start/End: Complemental strand, 4983123 - 4982986
Alignment:
Q  469 ggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatt 567  Q
    |||||| ||||||| |||| | ||||||||||||| | ||||||| ||| ||| ||||||||||||||||  || |||| || ||||||| |||||||||    
T  4983123 ggcttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattcatccttgtaattgctaatcctcgcaatttagccttgcaattattaatcatt 4983024  T
Q  568 taaaatttggtccttggaccaaattaatcactgccacg 605  Q
    |||||||| |||| |   || | |||||||||||||||    
T  4983023 taaaatttcgtccctctccccacttaatcactgccacg 4982986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 644 - 717
Target Start/End: Complemental strand, 5369168 - 5369095
Alignment:
Q  644 aaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||| || || ||||||    
T  5369168 aaattccaattttgcccttaagaagaggacaaaatattgaagaaaaaattgaaaacctaggagtaaaattggaa 5369095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 476 - 600
Target Start/End: Complemental strand, 5818194 - 5818069
Alignment:
Q  476 tgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatt 574  Q
    |||||||||| | ||||| ||||||||| ||||||||| || ||||||||||| | |||||||| || |||| || |||| |  ||||||||||||||||    
T  5818194 tgatgtgtttcgtctttgtaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctgtcaatttacccttgcattgtttaatcatttaaaatt 5818095  T
Q  575 tggtccttggaccaaattaatcactg 600  Q
    |  ||||| |||||| ||||||||||    
T  5818094 tcatcctttgaccaacttaatcactg 5818069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 510 - 575
Target Start/End: Original strand, 22566841 - 22566906
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaattt 575  Q
    ||||||||| ||||||||||||||||||| || |||| || |||||||||||||||||||||||||    
T  22566841 aaaattcgttcctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaaaattt 22566906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 510 - 575
Target Start/End: Complemental strand, 33247628 - 33247563
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaattt 575  Q
    ||||| ||||||||||||||||||||||| || |||| || |||||||||||||||||||||||||    
T  33247628 aaaatccgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaaaattt 33247563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 591 - 656
Target Start/End: Complemental strand, 35508545 - 35508480
Alignment:
Q  591 ttaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    ||||||||||||| |||| |||||||||||||||||||||||||||| || ||||||| |||||||    
T  35508545 ttaatcactgccatgtcattaatttgatgacgtggcaatcactgccatacatgaaattccaatttt 35508480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 468 - 627
Target Start/End: Original strand, 16605601 - 16605761
Alignment:
Q  468 aggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcat 566  Q
    ||||||| |||||||||| | | ||||||||||| | ||||||||| || ||||||||||| |  || |||| || |||| || |||| |  ||||||||    
T  16605601 aggcttaatgatgtgtttcgtccttgcaattaggtgtcatttaaaaattagtccctgtaatcgtcaaacctgccaatttacccttgcattgattaatcat 16605700  T
Q  567 ttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggca 627  Q
    ||||||||| |||| |   || | |||||||||||||||||||||||| | ||||||||||    
T  16605701 ttaaaatttcgtccctccccccacttaatcactgccacgtcactaattagctgacgtggca 16605761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 518 - 656
Target Start/End: Complemental strand, 37976531 - 37976393
Alignment:
Q  518 tccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttga 617  Q
    |||||||||| |||||| |||||| |||| |  |||| |  ||||||||||||||||| |||  |   || | ||||||||||||| |||||||||||||    
T  37976531 tccctgtaatcgctaattctgacaatttatcattgcattgtttaatcatttaaaatttcgtcactctccccacttaatcactgccatgtcactaatttga 37976432  T
Q  618 tgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    ||||||| ||||||| | || || ||||||| |||||||    
T  37976431 tgacgtgacaatcacagtcatacatgaaattccaatttt 37976393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 467 - 608
Target Start/End: Complemental strand, 52573656 - 52573514
Alignment:
Q  467 aaggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatca 565  Q
    |||||||| |||||||||| | | ||||||||||||| ||||||||| || |||| ||||||  ||||||||  || |||| |  |||| |  |||||||    
T  52573656 aaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcactaatcctagcaatttaccattgcattgtttaatca 52573557  T
Q  566 tttaaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    |||||||||  |||||| || ||| ||||||||||||||||||    
T  52573556 tttaaaattccgtcctttgatcaatttaatcactgccacgtca 52573514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 468 - 608
Target Start/End: Original strand, 27891583 - 27891724
Alignment:
Q  468 aggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcat 566  Q
    ||||||| |||||||||| | | |||||||||| |   |||||||| || ||||||||||| ||||||  || || |||| || |||| |  ||||||||    
T  27891583 aggcttaatgatgtgtttcgtccttgcaattagacattatttaaaaattagtccctgtaatcgctaattttggcaatttacccttgcattgtttaatcat 27891682  T
Q  567 ttaaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    ||||||||| |||||| |||||| |||||||||| |||||||    
T  27891683 ttaaaatttcgtcctttgaccaacttaatcactgtcacgtca 27891724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 467 - 598
Target Start/End: Complemental strand, 22987279 - 22987147
Alignment:
Q  467 aaggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatca 565  Q
    |||||||| |||||||||| | | || ||||||| || ||||||||| || |||| |||||| ||||||||||||| | || || |||  |  |||||||    
T  22987279 aaggcttaatgatgtgtttcgtccttacaattagacgtcatttaaaaattagtccatgtaatcgctaatcctgacaatatacccttgctttgtttaatca 22987180  T
Q  566 tttaaaatttggtccttggaccaaattaatcac 598  Q
    |||||||||| |||||| |||||| ||||||||    
T  22987179 tttaaaatttcgtcctttgaccaacttaatcac 22987147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 467 - 608
Target Start/End: Original strand, 50503823 - 50503965
Alignment:
Q  467 aaggcttattgatgtgtttagcctttgcaattaggcggcatttaaaattc-gtccctgtaattgctaatcctgacattttaaccctgcaattgttaatca 565  Q
    |||||||| |||||||||| | | | ||||||||||  ||||||||| || |||| |||||| | ||||| |  || |||| || |||| |  |||||||    
T  50503823 aaggcttaatgatgtgtttcgtcctcgcaattaggcatcatttaaaaatcagtccatgtaatcgttaatcttagcaatttacccttgcattgtttaatca 50503922  T
Q  566 tttaaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    |||||||||  |||||| |||||| ||||||||||||||||||    
T  50503923 tttaaaattccgtcctttgaccaacttaatcactgccacgtca 50503965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 521 - 627
Target Start/End: Original strand, 56014778 - 56014884
Alignment:
Q  521 ctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatga 620  Q
    ||||||| |||||||||| ||  ||  ||||||||  |||||||||||||||||| |||| |   |  | |||||||||||||||||||| |||||||||    
T  56014778 ctgtaatcgctaatcctggcaaattgcccctgcaaacgttaatcatttaaaatttcgtccctcatcacagttaatcactgccacgtcactgatttgatga 56014877  T
Q  621 cgtggca 627  Q
    |||||||    
T  56014878 cgtggca 56014884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 559 - 624
Target Start/End: Complemental strand, 8439561 - 8439496
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtg 624  Q
    ||||||||||||||||| |||| | |||| | |||||||| ||||||||| |||||||||||||||    
T  8439561 ttaatcatttaaaatttcgtcccttgacccacttaatcaccgccacgtcagtaatttgatgacgtg 8439496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 511 - 608
Target Start/End: Complemental strand, 9731595 - 9731498
Alignment:
Q  511 aaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    ||||| || |||||||| ||||||||||||| |||| || || | |  ||||||||||||||||| || ||| ||| || ||||||||||||||||||    
T  9731595 aaattagttcctgtaatcgctaatcctgacaatttatccttgtattgtttaatcatttaaaatttcgttctttgactaacttaatcactgccacgtca 9731498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 559 - 624
Target Start/End: Complemental strand, 30642483 - 30642418
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtg 624  Q
    ||||||||||||||||| |||| | |||| | ||||| |||||||||||| |||||||||||||||    
T  30642483 ttaatcatttaaaatttcgtcccttgacccacttaatgactgccacgtcattaatttgatgacgtg 30642418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 476 - 608
Target Start/End: Complemental strand, 39701328 - 39701195
Alignment:
Q  476 tgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatt 574  Q
    |||||||||| | | ||||||||||||| ||||||||| || |||  |||||| | ||||| ||||| |||| |  |||| |  ||||||||||||||||    
T  39701328 tgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctatgtaatcgttaatcttgacaatttacctttgcattgtttaatcatttaaaatt 39701229  T
Q  575 tggtccttggaccaaattaatcactgccacgtca 608  Q
    | ||| || |||||| ||||||||||||| ||||    
T  39701228 tcgtcatttgaccaacttaatcactgccaagtca 39701195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 468 - 608
Target Start/End: Complemental strand, 50504252 - 50504111
Alignment:
Q  468 aggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcat 566  Q
    ||||||| |||||||||| | | ||| ||||||||| ||||||||| || ||| ||||||| | |||||| | || |||| || |||| |  ||||||||    
T  50504252 aggcttaatgatgtgtttcgtccttgtaattaggcgtcatttaaaaattagtctctgtaatcgttaatccaggcaatttacccttgcattgtttaatcat 50504153  T
Q  567 ttaaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    ||||||||| |||||| ||| || ||||||||| ||| ||||    
T  50504152 ttaaaatttcgtcctttgacaaacttaatcactcccaagtca 50504111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 492 - 608
Target Start/End: Original strand, 50750910 - 50751027
Alignment:
Q  492 tgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaa 590  Q
    |||||||||||| | ||||||| |||||||||||||| |||||||||| ||  |||||| |||| |  |||||||||||||| || |||  || ||| |     
T  50750910 tgcaattaggcgtcgtttaaaaattcgtccctgtaatcgctaatcctggcaaattaaccttgcattgtttaatcatttaaaaattcgtcactgaacccac 50751009  T
Q  591 ttaatcactgccacgtca 608  Q
    ||||| ||||||||||||    
T  50751010 ttaatgactgccacgtca 50751027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 591 - 648
Target Start/End: Complemental strand, 53129811 - 53129754
Alignment:
Q  591 ttaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatt 648  Q
    |||||||||||||| ||||||||||||||||||| ||||||||  ||||| |||||||    
T  53129811 ttaatcactgccacatcactaatttgatgacgtgacaatcactatcacacatgaaatt 53129754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 472 - 580
Target Start/End: Original strand, 6236834 - 6236942
Alignment:
Q  472 ttattgatgtgtttagcctttgcaattaggcggcatttaaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaa 571  Q
    |||||||||| ||||| | |||||||||| || |||||||||||    | |||||| | |||||| |  | |||| || |||||||||||||||||||||    
T  6236834 ttattgatgtctttagtccttgcaattagacgtcatttaaaatttagtcttgtaatcgttaatcccgggaatttacccttgcaattgttaatcatttaaa 6236933  T
Q  572 atttggtcc 580  Q
    |||||||||    
T  6236934 atttggtcc 6236942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 562 - 656
Target Start/End: Complemental strand, 17356256 - 17356165
Alignment:
Q  562 atcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    |||||||||||||| |||| |   || | |||||||||| |||||||||||||||||   ||||||||||||| ||||| ||||||| |||||||    
T  17356256 atcatttaaaatttcgtccctctccccacttaatcactgtcacgtcactaatttgat---gtggcaatcactgtcacacatgaaattccaatttt 17356165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 467 - 598
Target Start/End: Original strand, 22717937 - 22718069
Alignment:
Q  467 aaggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatca 565  Q
    |||| ||| |||||||||| | | || ||||||| || ||||||||| || |||| |||||| ||||||||||||| | || || |||  |  |||||||    
T  22717937 aaggtttaatgatgtgtttcgtccttacaattagacgtcatttaaaaattagtccatgtaatcgctaatcctgacaatatacccttgctttgtttaatca 22718036  T
Q  566 tttaaaatttggtccttggaccaaattaatcac 598  Q
    |||||||||| |||||| |||||| ||||||||    
T  22718037 tttaaaatttcgtcctttgaccaacttaatcac 22718069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 548 - 624
Target Start/End: Complemental strand, 56015995 - 56015919
Alignment:
Q  548 ccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtg 624  Q
    ||||||||  |||||||||||||||||| ||||||   |  | |||||||||||||||||||| |||||||||||||    
T  56015995 ccctgcaaacgttaatcatttaaaatttcgtccttcatcacagttaatcactgccacgtcactgatttgatgacgtg 56015919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 476 - 597
Target Start/End: Original strand, 11523956 - 11524078
Alignment:
Q  476 tgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatt 574  Q
    |||||||||| | | ||||||||||||| ||||||||| || ||| ||||||| | |||||||| || | || || |||| |  ||||||||||||||||    
T  11523956 tgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctctgtaatcgttaatcctggcaatatacccttgcattgtttaatcatttaaaatt 11524055  T
Q  575 tggtccttggaccaaattaatca 597  Q
    | ||| || |||||| |||||||    
T  11524056 tcgtcatttgaccaacttaatca 11524078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 510 - 608
Target Start/End: Original strand, 22923180 - 22923278
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    |||||| ||| ||||||| | ||||||||||| ||||  | |||| |  ||||||||||||||||| ||| || |||||| |||||||||| |||||||    
T  22923180 aaaattagtctctgtaatcgttaatcctgacaatttactcttgcattgtttaatcatttaaaatttcgtcatttgaccaatttaatcactgacacgtca 22923278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 510 - 608
Target Start/End: Original strand, 22927833 - 22927931
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    |||||| ||| ||||||| | ||||||||||| ||||  | |||| |  ||||||||||||||||| ||| || |||||| |||||||||| |||||||    
T  22927833 aaaattagtctctgtaatcgttaatcctgacaatttactcttgcattgtttaatcatttaaaatttcgtcatttgaccaatttaatcactgacacgtca 22927931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 510 - 608
Target Start/End: Original strand, 22984112 - 22984210
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    |||||| ||| ||||||| | ||||||||||| ||||  | |||| |  ||||||||||||||||| ||| || |||||| |||||||||| |||||||    
T  22984112 aaaattagtctctgtaatcgttaatcctgacaatttactcttgcattgtttaatcatttaaaatttcgtcatttgaccaatttaatcactgacacgtca 22984210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 510 - 608
Target Start/End: Original strand, 22997700 - 22997798
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    |||||| ||| ||||||| | ||||||||||| ||||  | |||| |  ||||||||||||||||| ||| || |||||| |||||||||| |||||||    
T  22997700 aaaattagtctctgtaatcgttaatcctgacaatttactcttgcattgtttaatcatttaaaatttcgtcatttgaccaatttaatcactgacacgtca 22997798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 510 - 580
Target Start/End: Complemental strand, 44967424 - 44967354
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtcc 580  Q
    |||||| ||||||||||| |||||||||| || |||| ||||||| |  ||||||||||||||||| ||||    
T  44967424 aaaattggtccctgtaatcgctaatcctggcaatttacccctgcattgtttaatcatttaaaatttcgtcc 44967354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 510 - 627
Target Start/End: Original strand, 24349716 - 24349833
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcac 609  Q
    |||||| ||||||||| | |||||||||  ||   || || ||||||  ||||||||||||||||| |||| |   || | |||||||||||||||||||    
T  24349716 aaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtccctctccccagttaatcactgccacgtcac 24349815  T
Q  610 taatttgatgacgtggca 627  Q
    |||| |||||| ||||||    
T  24349816 taatctgatgaggtggca 24349833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 559 - 620
Target Start/End: Complemental strand, 39539255 - 39539194
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatga 620  Q
    ||||||||||||||||| |||||| |||| | ||||| |||||||| ||| |||||||||||    
T  39539255 ttaatcatttaaaatttcgtcctttgacccagttaatgactgccacatcattaatttgatga 39539194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 558 - 627
Target Start/End: Complemental strand, 40388444 - 40388375
Alignment:
Q  558 gttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggca 627  Q
    |||||||||||||||||| |||| ||  |  | ||||||| ||||||||||||||||||||||| |||||    
T  40388444 gttaatcatttaaaatttcgtccctgatcacagttaatcattgccacgtcactaatttgatgacatggca 40388375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 468 - 572
Target Start/End: Complemental strand, 50751926 - 50751822
Alignment:
Q  468 aggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcat 566  Q
    ||||||| ||||||||||  ||  |||||||||||| | ||||||| ||||||| |||||| |||||||||||||  |||||| |||| |  ||||||||    
T  50751926 aggcttaatgatgtgtttcacccctgcaattaggcgtcgtttaaaaattcgtcc-tgtaatcgctaatcctgacaaattaaccttgcattgtttaatcat 50751828  T
Q  567 ttaaaa 572  Q
    ||||||    
T  50751827 ttaaaa 50751822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 559 - 604
Target Start/End: Original strand, 51859498 - 51859543
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccac 604  Q
    ||||||||||||||||| |||||| |||||| ||||||||||||||    
T  51859498 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccac 51859543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 468 - 608
Target Start/End: Complemental strand, 51859833 - 51859692
Alignment:
Q  468 aggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcat 566  Q
    ||||||| |||||||||| | | |||||||||| ||  |||||||| || |||  |||||| |||||||||| || |||| || || | |  ||||||||    
T  51859833 aggcttaatgatgtgtttcgtccttgcaattagacgtaatttaaaaattagtctttgtaatcgctaatcctggcaatttatccttgtattgtttaatcat 51859734  T
Q  567 ttaaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    ||||||||| |||||| || ||| ||||||||| ||| ||||    
T  51859733 ttaaaatttcgtcctttgatcaacttaatcactcccaagtca 51859692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #102
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 551 - 599
Target Start/End: Original strand, 1178126 - 1178174
Alignment:
Q  551 tgcaattgttaatcatttaaaatttggtccttggaccaaattaatcact 599  Q
    ||||||| ||||||||||||||||| |||||| |||||| |||||||||    
T  1178126 tgcaattattaatcatttaaaatttcgtcctttgaccaacttaatcact 1178174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #103
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 510 - 605
Target Start/End: Original strand, 5368989 - 5369084
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacg 605  Q
    |||||| |||| |||||| |||||||||| || |||| ||||||| |  ||||||||||||||||| |||| |   || | |||||||||||||||    
T  5368989 aaaattggtccttgtaatcgctaatcctggcaatttacccctgcattgtttaatcatttaaaattttgtccctctccccacttaatcactgccacg 5369084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #104
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 510 - 605
Target Start/End: Complemental strand, 43155882 - 43155787
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacg 605  Q
    |||||| ||||||||||| | |||||||| || |||| ||||||| |  ||||||||||||||||| |||| |   || | |||||||||||||||    
T  43155882 aaaattggtccctgtaatcgttaatcctggcaatttatccctgcattatttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 43155787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #105
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 560 - 627
Target Start/End: Original strand, 55866201 - 55866268
Alignment:
Q  560 taatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggca 627  Q
    ||||||||||||| ||||||| || ||| | ||||| |||||||||||||| ||||| | ||||||||    
T  55866201 taatcatttaaaaattggtccctgaacccagttaataactgccacgtcactgatttgcttacgtggca 55866268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #106
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 510 - 580
Target Start/End: Original strand, 7451876 - 7451946
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtcc 580  Q
    |||||| ||||||||||| | |||||||| || |||| ||||||| |  ||||||||||||||||| ||||    
T  7451876 aaaattggtccctgtaatcgttaatcctggcaatttacccctgcattgtttaatcatttaaaatttcgtcc 7451946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #107
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 495 - 608
Target Start/End: Complemental strand, 22718339 - 22718225
Alignment:
Q  495 aattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaatta 593  Q
    ||||||||| ||||||||| ||  || ||||||||| |||||||| || ||||  | |||| |  ||||||||||||||||| ||| || |||||| |||    
T  22718339 aattaggcgtcatttaaaaattactctctgtaattgttaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcatttgaccaattta 22718240  T
Q  594 atcactgccacgtca 608  Q
    ||||| | |||||||    
T  22718239 atcaccgacacgtca 22718225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #108
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 495 - 608
Target Start/End: Original strand, 22986877 - 22986991
Alignment:
Q  495 aattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaatta 593  Q
    ||||||||| ||||||||| ||  || ||||||||| |||||||| || ||||  | |||| |  ||||||||||||||||| ||| || |||||| |||    
T  22986877 aattaggcgtcatttaaaaattactctctgtaattgttaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcatttgaccaattta 22986976  T
Q  594 atcactgccacgtca 608  Q
    ||||| | |||||||    
T  22986977 atcaccgacacgtca 22986991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #109
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 510 - 608
Target Start/End: Complemental strand, 39667160 - 39667062
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    |||||| ||||||||||| | ||||||||  |  ||| || |||| |  ||||||||||||||||| ||| || |||||| |||||||| |||||||||    
T  39667160 aaaattggtccctgtaatcgttaatcctggtaaattacccttgcattgtttaatcatttaaaatttcgtcttttgaccaacttaatcaccgccacgtca 39667062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #110
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 510 - 575
Target Start/End: Original strand, 37248278 - 37248343
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaattt 575  Q
    |||||| ||||||||||| |||||||||| || |||| || |||| |  |||||||||||||||||    
T  37248278 aaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaattt 37248343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 216; Significance: 1e-118; HSPs: 59)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 467 - 717
Target Start/End: Original strand, 1695738 - 1695989
Alignment:
Q  467 aaggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatca 565  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  1695738 aaggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatca 1695837  T
Q  566 tttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaag 665  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||    
T  1695838 tttaaaatttggtcctttgaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgtcacacatgaaattccaattttgcccttaag 1695937  T
Q  666 aagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  1695938 aagaggacaaaatattgaagaaagaattggaaacccaggggtaaatttggaa 1695989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 467 - 717
Target Start/End: Original strand, 33062048 - 33062299
Alignment:
Q  467 aaggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatca 565  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||     
T  33062048 aaggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcg 33062147  T
Q  566 tttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaag 665  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||    
T  33062148 tttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgtcacacatgaaattccaattttgcccttaag 33062247  T
Q  666 aagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  33062248 aagaggacaaaatattgaagaaagaattggaaacccaggggtaaatttggaa 33062299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 468 - 717
Target Start/End: Original strand, 13995672 - 13995922
Alignment:
Q  468 aggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcat 566  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| |    
T  13995672 aggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgt 13995771  T
Q  567 ttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaaga 666  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||    
T  13995772 ttaaaatttggtcctttgaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgtcacacatgaaattccaattttgcccttaaga 13995871  T
Q  667 agaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  13995872 agaggacaaaatattgaagaaagaattggaaacccaggggtaaatttggaa 13995922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 472 - 717
Target Start/End: Original strand, 41248562 - 41248808
Alignment:
Q  472 ttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaa 570  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  41248562 ttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcatccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtttaa 41248661  T
Q  571 aatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaagaagag 670  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||    
T  41248662 aatttggtcctttgaccaaattaatcactgccacatcactaatttgatgacgtggcaatcactgtcacacatgaaattccaattttgcccttaagaagag 41248761  T
Q  671 gacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    |||||||||||||||||||||||||||||||| |||| |||||||||    
T  41248762 gacaaaatattgaagaaagaattggaaacccaagggtaaatttggaa 41248808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 468 - 717
Target Start/End: Complemental strand, 33740101 - 33739851
Alignment:
Q  468 aggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcat 566  Q
    |||||||||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| |    
T  33740101 aggcttattgatgtgtttagcccttacaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgt 33740002  T
Q  567 ttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaaga 666  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||| ||||| ||||||| |||||||||||||||||    
T  33740001 ttaaaatttggtccttggaccaaattaatcactgccacatcactaatttgataacgcggcaatcactgtcacacatgaaattacaattttgcccttaaga 33739902  T
Q  667 agaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    ||||||||||||||||| ||||||||||||||||||||| | |||||||||    
T  33739901 agaggacaaaatattgatgaaagaattggaaacccagggataaatttggaa 33739851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 468 - 717
Target Start/End: Original strand, 14900495 - 14900732
Alignment:
Q  468 aggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcat 566  Q
    ||||||| ||||||| |||| | ||||||||||||| |||| |||| ||||||||||||||||||||||||             ||||||||||||||||    
T  14900495 aggcttaatgatgtgattagtccttgcaattaggcgtcattcaaaaattcgtccctgtaattgctaatcct-------------tgcaattgttaatcat 14900581  T
Q  567 ttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaaga 666  Q
    |||||||||||||||||||| || ||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||    
T  14900582 ttaaaatttggtccttggacaaacttaatcactaccacgtcactaatttgatgacgtggcaatcactgtcacacatgaaattccaattttgcccttaaga 14900681  T
Q  667 agaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  14900682 agaggacaaaatattgaagaaagaattggaaacccaggggtaaatttggaa 14900732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 137; E-Value: 4e-71
Query Start/End: Original strand, 545 - 717
Target Start/End: Complemental strand, 15848439 - 15848267
Alignment:
Q  545 taaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtga 644  Q
    ||||| ||||||  ||||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15848439 taaccttgcaatcattaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtga 15848340  T
Q  645 aatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  15848339 aattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaaattggaa 15848267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 559 - 717
Target Start/End: Complemental strand, 6658184 - 6658026
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| |||||||||    
T  6658184 ttaatcatttaaaatttagtcctttgaccaacttaatcactgccacgtcactaatttgatgacgtggcaatcactgccaaacatgaaattccaattttgc 6658085  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| || ||||||    
T  6658084 ccttaagaagaggacaaaatattgaagaaagaattggaaacctaggggtaaaattggaa 6658026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 559 - 717
Target Start/End: Original strand, 11163145 - 11163303
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||    
T  11163145 ttaatcatttaaaatttagtcctttgaccaacttaatcactgccacgtcactaatttgatgacgtggcaatcactgtcaaacatgaaatttcaattttgc 11163244  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||    
T  11163245 ccttaagaagaggacaaaatattgaagaaagaattggaaactcaggggtaaaattggaa 11163303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 559 - 717
Target Start/End: Complemental strand, 16099361 - 16099203
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| |||||| |||||| |||||||||||||||||||||||||||||||||||||||||| |||| || ||||||| |||||||||    
T  16099361 ttaatcatttaaaatttagtcctttgaccaacttaatcactgccacgtcactaatttgatgacgtggcaatcaccgccaaacatgaaattccaattttgc 16099262  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  16099261 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaaattggaa 16099203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 551 - 717
Target Start/End: Complemental strand, 10713068 - 10712902
Alignment:
Q  551 tgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttc 650  Q
    |||||| |||||||||||||||| | |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |    
T  10713068 tgcaatcgttaatcatttaaaatgtcgtcctttgaccaacttaatcactgccacgtcactaatttgatgacgtggcaatcactgcaacacatgaaattcc 10712969  T
Q  651 aattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| || ||||||    
T  10712968 aattttgcccttaagaagaggacaaaatattgaagaaagaatcggaaacctaggggtaaaattggaa 10712902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 510 - 704
Target Start/End: Original strand, 37895389 - 37895583
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcac 609  Q
    |||||| ||||||||| | |||||||||  ||   || || ||||||  |||||||||||||||||  ||||| |||||| |||||||||||||||||||    
T  37895389 aaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcatcctttgaccaacttaatcactgccacgtcac 37895488  T
Q  610 taatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccagg 704  Q
    ||||||||| ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37895489 taatttgataacgtggcaatcactgccacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccagg 37895583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 559 - 717
Target Start/End: Complemental strand, 39498616 - 39498458
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    |||||||||||||||||  ||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||| || ||||||| |||||||||    
T  39498616 ttaatcatttaaaatttaatcctttgaccaacttaatcactgccacgtcactaatatgatgacgtggcaatcactgccaaacatgaaattccaattttgc 39498517  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  39498516 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaaattggaa 39498458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 559 - 705
Target Start/End: Complemental strand, 39423852 - 39423706
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| |||||| |||||| |||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||| |||||||||    
T  39423852 ttaatcatttaaaattttgtcctttgaccaacttaatcactgccacgtcactaattcgatgacgtggcaatcactcccacacatgaaattccaattttgc 39423753  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggg 705  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||    
T  39423752 ccttaagaagatgacaaaatattgaagaaaaaattggaaacccaggg 39423706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 562 - 707
Target Start/End: Original strand, 22051088 - 22051233
Alignment:
Q  562 atcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgccct 661  Q
    |||||||||||||| |||||| |||||| |||||||||||||||||||||||| ||||| ||||||||||||  ||||| ||||||| ||||||||||||    
T  22051088 atcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaattcgatgatgtggcaatcactatcacacatgaaattccaattttgccct 22051187  T
Q  662 taagaagaggacaaaatattgaagaaagaattggaaacccaggggt 707  Q
    |||||||||||||||||||||||||||||||||||||| |||||||    
T  22051188 taagaagaggacaaaatattgaagaaagaattggaaactcaggggt 22051233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 559 - 716
Target Start/End: Complemental strand, 36480055 - 36479898
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||| ||||||||||| |||||| |||||| |||||||||||||||||||||||| |||||||||||||||||| |||| | ||||||| |||||||||    
T  36480055 ttaataatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaattcgatgacgtggcaatcactaccacgcatgaaattccaattttgc 36479956  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttgga 716  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||| || |||||    
T  36479955 ccttaagaagaggacaaaatattgaagaaagaattgaaaactcaggggtaaaattgga 36479898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 562 - 717
Target Start/End: Complemental strand, 2318492 - 2318337
Alignment:
Q  562 atcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgccct 661  Q
    |||| |||||||||  || || |||||| |||||||||||||| ||| ||||||||||||||| |||||||| |||||| ||||||| ||||||||||||    
T  2318492 atcacttaaaatttcatcttttgaccaacttaatcactgccacatcattaatttgatgacgtgacaatcactaccacacatgaaattccaattttgccct 2318393  T
Q  662 taagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| || ||||||    
T  2318392 taagaagaggacacaatattgaagaaagaattggaaacccaggggtaaaattggaa 2318337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 467 - 605
Target Start/End: Original strand, 33739701 - 33739840
Alignment:
Q  467 aaggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatca 565  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  33739701 aaggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatca 33739800  T
Q  566 tttaaaatttggtccttggaccaaattaatcactgccacg 605  Q
    |||||||||| |||| |   || | |||||||||||||||    
T  33739801 tttaaaatttcgtccctctccccacttaatcactgccacg 33739840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 467 - 605
Target Start/End: Complemental strand, 33062449 - 33062310
Alignment:
Q  467 aaggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatca 565  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  33062449 aaggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatca 33062350  T
Q  566 tttaaaatttggtccttggaccaaattaatcactgccacg 605  Q
    |||| ||||| |||| |   || | |||||||||||||||    
T  33062349 tttataatttcgtccctctccccacttaatcactgccacg 33062310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 510 - 717
Target Start/End: Complemental strand, 36755474 - 36755272
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcac 609  Q
    |||||| |||||| |||| |||||||||  ||   || || ||||||  ||||||||||||||||| |||||| |||||| ||||||||||     ||||    
T  36755474 aaaattggtccctataatcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgaccaacttaatcactg-----tcac 36755380  T
Q  610 taatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtga 709  Q
    |||||||||||| |||||||||||| ||||| ||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||| |||| |    
T  36755379 taatttgatgacatggcaatcactggcacacatgaaattccaatttctcccttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaa 36755280  T
Q  710 atttggaa 717  Q
    | ||||||    
T  36755279 aattggaa 36755272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 468 - 605
Target Start/End: Complemental strand, 13996071 - 13995933
Alignment:
Q  468 aggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcat 566  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| |    
T  13996071 aggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgt 13995972  T
Q  567 ttaaaatttggtccttggaccaaattaatcactgccacg 605  Q
    ||||||||| |||| |   || | |||||||||||||||    
T  13995971 ttaaaatttcgtccctctccccacttaatcactgccacg 13995933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 468 - 605
Target Start/End: Complemental strand, 41248957 - 41248819
Alignment:
Q  468 aggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcat 566  Q
    ||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| |    
T  41248957 aggcttattgatgtgtttaacccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgt 41248858  T
Q  567 ttaaaatttggtccttggaccaaattaatcactgccacg 605  Q
    ||||||||| |||| |   || | |||||||||||||||    
T  41248857 ttaaaatttcgtccctctccccacttaatcactgccacg 41248819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 559 - 666
Target Start/End: Complemental strand, 34448132 - 34448025
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||     
T  34448132 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatttgatgacgtggcaatcactggcacacatgaaatttcaattttgt 34448033  T
Q  659 ccttaaga 666  Q
    ||||||||    
T  34448032 ccttaaga 34448025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 475 - 580
Target Start/End: Complemental strand, 1696131 - 1696025
Alignment:
Q  475 ttgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaat 573  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  1696131 ttgatgtgtttagcccttgcaattaggcggcatttaaaaattcgttcctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtttaaaat 1696032  T
Q  574 ttggtcc 580  Q
    || ||||    
T  1696031 ttcgtcc 1696025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 627 - 717
Target Start/End: Original strand, 44713920 - 44714010
Alignment:
Q  627 aatcactgccacacgtgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||    
T  44713920 aatcactgccacacgtgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaactcaggggtaaaattggaa 44714010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 627 - 717
Target Start/End: Complemental strand, 36382430 - 36382340
Alignment:
Q  627 aatcactgccacacgtgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || ||||||    
T  36382430 aatcactgccacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccatgggtaaaattggaa 36382340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 467 - 608
Target Start/End: Complemental strand, 8710896 - 8710754
Alignment:
Q  467 aaggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatca 565  Q
    |||||||| |||||||||| | | ||||||||||||| ||||||||| || |||| |||||| ||||||||||||| |||| || |||| |  |||||||    
T  8710896 aaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcgctaatcctgacaatttacccttgcattgtttaatca 8710797  T
Q  566 tttaaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    |||||||||| |||||| |||||| || |||||||||||||||    
T  8710796 tttaaaatttcgtcctttgaccaactttatcactgccacgtca 8710754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 510 - 656
Target Start/End: Original strand, 15848130 - 15848276
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcac 609  Q
    |||||| ||||||||||| ||||||||||  | |||| || |||| |  ||||||||||||||||| |||| |   || | |||||||||||||||||||    
T  15848130 aaaattggtccctgtaatcgctaatcctggtaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcac 15848229  T
Q  610 taatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    ||||||||||| ||||||||||||| ||||| ||||||| |||||||    
T  15848230 taatttgatgatgtggcaatcactgtcacacatgaaattccaatttt 15848276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 510 - 656
Target Start/End: Complemental strand, 44714147 - 44714001
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcac 609  Q
    |||||| |||||||||||||||||||||| || |||| || |||| |  ||||||||||||||||| |||| |   || | ||||||||||||| |||||    
T  44714147 aaaattagtccctgtaattgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccatgtcac 44714048  T
Q  610 taatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    ||||||||||||||| |||||| || ||||| ||||||| |||||||    
T  44714047 taatttgatgacgtgacaatcattgtcacacatgaaattccaatttt 44714001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 510 - 656
Target Start/End: Original strand, 36382203 - 36382349
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcac 609  Q
    |||||| |||||| |||| ||||||||||||| |||| || |||| |  |||||||||||||||||  ||| |   || | |||||||||||||||||||    
T  36382203 aaaattggtccctataatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcatccctctccccacttaatcactgccacgtcac 36382302  T
Q  610 taatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    ||||||||||||||||||||||||| || || | ||||| |||||||    
T  36382303 taatttgatgacgtggcaatcactgtcagacataaaattccaatttt 36382349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 627 - 717
Target Start/End: Complemental strand, 45556350 - 45556260
Alignment:
Q  627 aatcactgccacacgtgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    ||||||||||| || ||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||| || ||||||    
T  45556350 aatcactgccaaacatgaaattccaattttgtccttaagaagatgacaaaatattgaagaaagaattggaaactcaggggtaaaattggaa 45556260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 559 - 656
Target Start/End: Complemental strand, 37895684 - 37895587
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    ||||||||||||||||| |||| |   || | |||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||    
T  37895684 ttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaatttgatgacgtgacaatcactgtcacacatgaaatttcaatttt 37895587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 469 - 608
Target Start/End: Complemental strand, 28226170 - 28226030
Alignment:
Q  469 ggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatt 567  Q
    |||||| |||||||||| | | ||||||||||||| ||||||||| || ||||||||||| |||||||||| || |||| || |||| |  |||||||||    
T  28226170 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatt 28226071  T
Q  568 taaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    |||||||| || ||| |||||| ||||||||| ||| ||||    
T  28226070 taaaatttcgtactttgaccaacttaatcactaccaagtca 28226030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 470 - 608
Target Start/End: Original strand, 11830365 - 11830504
Alignment:
Q  470 gcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcattt 568  Q
    ||||| |||||||||| | | |||||||||| || ||||||||| || ||||||||||||||||||||| ||| |||| || |||| |  ||||||||||    
T  11830365 gcttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaattagtccctgtaattgctaatcctaacaatttacccttgcattgtttaatcattt 11830464  T
Q  569 aaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    ||||||| ||| || ||| || | ||||||||||||||||    
T  11830465 aaaatttcgtcatttgacaaactcaatcactgccacgtca 11830504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 467 - 608
Target Start/End: Original strand, 15604337 - 15604479
Alignment:
Q  467 aaggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatca 565  Q
    |||||||| |||||||||| | | ||||||||||| | ||||||||| || ||||||||||| |||||||||| || |||| || |||| |  |||||||    
T  15604337 aaggcttaatgatgtgtttcgtccttgcaattaggtgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatca 15604436  T
Q  566 tttaaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    |||||||||| |||||| || ||| ||||||||| ||| ||||    
T  15604437 tttaaaatttcgtcctttgatcaacttaatcactaccaagtca 15604479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 467 - 608
Target Start/End: Complemental strand, 15604767 - 15604625
Alignment:
Q  467 aaggcttattgatgtgtttagcctttgcaattaggcggcatttaaaat-tcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatca 565  Q
    |||| ||| |||||||||| | | ||||||||||| | |||||||||  | ||||||||||| |||||||||| || |||| || |||| |  |||||||    
T  15604767 aaggtttaatgatgtgttttgtccttgcaattaggtgtcatttaaaaactagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatca 15604668  T
Q  566 tttaaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    |||||||||| |||||| |||||| |||||||||||| |||||    
T  15604667 tttaaaatttcgtcctttgaccaacttaatcactgccccgtca 15604625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 510 - 656
Target Start/End: Original strand, 39423557 - 39423703
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcac 609  Q
    |||||| ||| ||||||| |||||| ||| || |||| || || | |  ||||||||||||||||| |||| |   || | ||||||||||||| |||||    
T  39423557 aaaattggtctctgtaatcgctaattctggcaatttatccttgtattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccatgtcac 39423656  T
Q  610 taatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    ||||||||||||||||||||||||| || || ||||||| |||||||    
T  39423657 taatttgatgacgtggcaatcactgtcatacatgaaattccaatttt 39423703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 522 - 656
Target Start/End: Original strand, 2318212 - 2318346
Alignment:
Q  522 tgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgac 621  Q
    |||||| |||||| ||| || |||| || |||| |  ||||||||||||||||| |||| |   || | ||||| | |||||||||||||||||||||||    
T  2318212 tgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccacttaattaatgccacgtcactaatttgatgac 2318311  T
Q  622 gtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    ||| ||||||||| ||||| ||||||| |||||||    
T  2318312 gtgacaatcactgtcacacatgaaattccaatttt 2318346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 591 - 656
Target Start/End: Original strand, 10712846 - 10712911
Alignment:
Q  591 ttaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||| | ||||| |||||||    
T  10712846 ttaatcactaccacgtcactaatttgatgacgtggcaatcactgtcacacataaaattccaatttt 10712911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 591 - 656
Target Start/End: Original strand, 34447935 - 34448000
Alignment:
Q  591 ttaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    |||||||||||||| ||||||||||||||||||| ||||||||| ||||| ||||||| |||||||    
T  34447935 ttaatcactgccacatcactaatttgatgacgtgacaatcactgtcacacatgaaattccaatttt 34448000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 488 - 656
Target Start/End: Original strand, 36479737 - 36479906
Alignment:
Q  488 cctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggac 586  Q
    |||||||||||||| | | ||||||| || |||| |||||| ||||||| |  ||||||| || |||| |  ||||||||||||||||| |||| |   |    
T  36479737 cctttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaatcttagcattttacccttgcattgtttaatcatttaaaatttcgtccatctcc 36479836  T
Q  587 caaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    | | ||||||||||||| |||||||||||||||||||| |||| |||| || || ||||| | |||||||    
T  36479837 ccacttaatcactgccatgtcactaatttgatgacgtgacaataactgtcatacatgaaactccaatttt 36479906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 591 - 656
Target Start/End: Original strand, 36755216 - 36755281
Alignment:
Q  591 ttaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    |||||||||| ||||||||||||||||||||||| ||||||||| ||||| ||||||| |||||||    
T  36755216 ttaatcactgtcacgtcactaatttgatgacgtgacaatcactgtcacacatgaaattccaatttt 36755281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 559 - 633
Target Start/End: Complemental strand, 9076404 - 9076330
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcact 633  Q
    ||||||||||||||||| ||| ||  ||||| |||||||||||||| ||||||||| ||||||||| ||||||||    
T  9076404 ttaatcatttaaaatttcgtcatttaaccaacttaatcactgccacatcactaattcgatgacgtgacaatcact 9076330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 476 - 608
Target Start/End: Original strand, 8342194 - 8342327
Alignment:
Q  476 tgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatt 574  Q
    |||||||||| | | ||||||||| ||| ||||||||| || |||  |||||||| |||||||| || |||| || |||| |  ||||||||||||||||    
T  8342194 tgatgtgtttcgtccttgcaattaagcgtcatttaaaaattagtctatgtaattggtaatcctggcaatttatccttgcattgtttaatcatttaaaatt 8342293  T
Q  575 tggtccttggaccaaattaatcactgccacgtca 608  Q
    | |||||| |||||| ||||||||| ||| ||||    
T  8342294 tcgtcctttgaccaacttaatcactaccaagtca 8342327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 510 - 615
Target Start/End: Complemental strand, 13692606 - 13692501
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcac 609  Q
    |||||| ||||||||| | |||||||||  ||   || || ||||||  ||||||||||||||||| |||||| |||||| |||||||||| ||||||||    
T  13692606 aaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgaccaacttaatcactgtcacgtcac 13692507  T
Q  610 taattt 615  Q
    ||||||    
T  13692506 taattt 13692501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 467 - 605
Target Start/End: Complemental strand, 14900880 - 14900743
Alignment:
Q  467 aaggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatca 565  Q
    |||||||| ||||||| |||| | ||||||||||| | | ||||||| || |||||||||||||||||||||| || |||| || || |  |||||||||    
T  14900880 aaggcttaatgatgtgattagtccttgcaattaggggtcgtttaaaaatttgtccctgtaattgctaatcctggcaatttagccttgta--tgttaatca 14900783  T
Q  566 tttaaaatttggtccttggaccaaattaatcactgccacg 605  Q
    |||||||||| |||| |   || | |||||||||||||||    
T  14900782 tttaaaatttcgtccctctccccacttaatcactgccacg 14900743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 492 - 608
Target Start/End: Complemental strand, 39936651 - 39936535
Alignment:
Q  492 tgcaattaggcggcatttaaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaat 591  Q
    ||||||||||||   ||||||||| |||| |||||| | |||||||| ||  ||| || |||||   ||||||||||||||||| |||||| |||||| |    
T  39936651 tgcaattaggcgtggtttaaaattggtccttgtaatcgttaatcctggcaaattacccttgcaaagtttaatcatttaaaatttcgtcctttgaccaatt 39936552  T
Q  592 taatcactgccacgtca 608  Q
    |||||| ||||||||||    
T  39936551 taatcaatgccacgtca 39936535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 467 - 608
Target Start/End: Complemental strand, 8342607 - 8342465
Alignment:
Q  467 aaggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatca 565  Q
    |||| ||| |||||||||| | | || |||||||||| ||||||||| || ||| |||||||   ||||||||||| |||| || |||| |  ||||| |    
T  8342607 aaggtttaatgatgtgtttcgtccttacaattaggcgtcatttaaaaattagtctctgtaatcaataatcctgacaatttacccttgcattgtttaatta 8342508  T
Q  566 tttaaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    |||||||||| |||||| || ||| |||||||||||| |||||    
T  8342507 tttaaaatttcgtcctttgaacaacttaatcactgccgcgtca 8342465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 627 - 700
Target Start/End: Original strand, 17266523 - 17266596
Alignment:
Q  627 aatcactgccacacgtgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacc 700  Q
    |||||||| ||||| ||| ||| ||||||||||||||||||||||| | || || ||||||| |||||||||||    
T  17266523 aatcactgtcacacatgatattccaattttgcccttaagaagaggaaagaagatggaagaaaaaattggaaacc 17266596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 491 - 605
Target Start/End: Original strand, 16099077 - 16099192
Alignment:
Q  491 ttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaa 589  Q
    ||||||||||| | ||||||||| || |||||||||||  ||||||||| || |||| ||||||| |  ||||||||||||||||| |||| |   || |    
T  16099077 ttgcaattaggggtcatttaaaaattggtccctgtaatcactaatcctggcaatttacccctgcattgtttaatcatttaaaatttcgtccctctcccca 16099176  T
Q  590 attaatcactgccacg 605  Q
     |||||||||||||||    
T  16099177 cttaatcactgccacg 16099192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 494 - 608
Target Start/End: Complemental strand, 41588459 - 41588344
Alignment:
Q  494 caattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaatt 592  Q
    |||||||||| ||||||||| || ||||||||||| |||||| ||| || ||||  | | || |  |||||||||||||||||  ||||| |||||| ||    
T  41588459 caattaggcgtcatttaaaaattagtccctgtaatcgctaattctggcaatttacacttacattgtttaatcatttaaaatttcatcctttgaccaactt 41588360  T
Q  593 aatcactgccacgtca 608  Q
    ||||||||||| ||||    
T  41588359 aatcactgccaagtca 41588344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 510 - 580
Target Start/End: Original strand, 45556154 - 45556224
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtcc 580  Q
    |||||| ||||||||||| |||||||||| || |||| ||||||| |  ||||||||||||||||| ||||    
T  45556154 aaaattggtccctgtaatcgctaatcctggcaatttatccctgcattgtttaatcatttaaaattttgtcc 45556224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 551 - 604
Target Start/End: Complemental strand, 36382472 - 36382419
Alignment:
Q  551 tgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccac 604  Q
    |||||| |||||||||||||||||| |||||| | |||| ||||||||||||||    
T  36382472 tgcaatcgttaatcatttaaaatttcgtcctttggccaacttaatcactgccac 36382419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 559 - 604
Target Start/End: Original strand, 44713886 - 44713931
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccac 604  Q
    ||||||||||||||||| |||||| |||||| ||||||||||||||    
T  44713886 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccac 44713931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 559 - 627
Target Start/End: Complemental strand, 3653417 - 3653349
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggca 627  Q
    ||||||||||||||||| |||| |   |||| ||||||||| ||||||||||||| |||||| ||||||    
T  3653417 ttaatcatttaaaatttcgtccctcttccaagttaatcactaccacgtcactaatctgatgaggtggca 3653349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 592 - 656
Target Start/End: Complemental strand, 22051298 - 22051234
Alignment:
Q  592 taatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    ||||||||||||  ||||||||||||||||||| |||||||| ||| |  |||| ||||||||||    
T  22051298 taatcactgccatatcactaatttgatgacgtgacaatcactaccatatatgaagtttcaatttt 22051234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 559 - 626
Target Start/End: Complemental strand, 25231185 - 25231118
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggc 626  Q
    ||||||||||||||||| |||| | | || | ||||| |||||||||||| |||| ||||||||||||    
T  25231185 ttaatcatttaaaatttcgtcccttgtcccagttaatgactgccacgtcattaatatgatgacgtggc 25231118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 510 - 580
Target Start/End: Complemental strand, 11163409 - 11163339
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtcc 580  Q
    |||||| ||||||||||| |||||||||| || |||| | ||||| |  ||||||||||||||||| ||||    
T  11163409 aaaattggtccctgtaatcgctaatcctggcaatttacctctgcattgtttaatcatttaaaatttcgtcc 11163339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 531 - 624
Target Start/End: Complemental strand, 6848099 - 6848006
Alignment:
Q  531 taatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtg 624  Q
    |||||||||||||||  ||||| ||   ||||||||||||||||| |||| |   || | ||||| ||| |||||||| |||||||||||||||    
T  6848099 taatcctgacattttgtccctgaaaaatttaatcatttaaaatttcgtccatcaccccacttaattactaccacgtcagtaatttgatgacgtg 6848006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 214; Significance: 1e-117; HSPs: 86)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 469 - 717
Target Start/End: Original strand, 31482402 - 31482651
Alignment:
Q  469 ggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatt 567  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||    
T  31482402 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtt 31482501  T
Q  568 taaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaagaa 667  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||    
T  31482502 taaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgtcacacatgaaattccaattttgcccttaagaa 31482601  T
Q  668 gaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  31482602 gaggacaaaatattgaagaaagaattggaaacccaggggtaaatttggaa 31482651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 467 - 717
Target Start/End: Complemental strand, 1506366 - 1506115
Alignment:
Q  467 aaggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatca 565  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||     
T  1506366 aaggtttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcg 1506267  T
Q  566 tttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaag 665  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||    
T  1506266 tttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgtcacacatgaaattccaattttgcccttaag 1506167  T
Q  666 aagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  1506166 aagaggacaaaatattgaagaaagaattggaaacccaggggtaaatttggaa 1506115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 468 - 713
Target Start/End: Original strand, 297013 - 297259
Alignment:
Q  468 aggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcat 566  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||||||||| |    
T  297013 aggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggtattttaaccctgcaattgttaatcgt 297112  T
Q  567 ttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaaga 666  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||| ||||    
T  297113 ttaaaatttggtccttggaccaaattaatcactgccacatcactaatttgatgacgtggcaatcactgtcacacatgaaattacaattttgccctcaaga 297212  T
Q  667 agaggacaaaatattgaagaaagaattggaaacccaggggtgaattt 713  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||    
T  297213 agaggacaaaatattgaagaaagaattgaaaacccaggggtaaattt 297259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 472 - 717
Target Start/End: Original strand, 6757868 - 6758114
Alignment:
Q  472 ttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaa 570  Q
    ||||||| ||| |||| | ||||||||||||| ||||||||| || |||||||||||||||||||||| || ||||  |  |||||||||||||||||||    
T  6757868 ttattgacgtgattagtccttgcaattaggcgtcatttaaaaatttgtccctgtaattgctaatcctggcaatttagtctcgcaattgttaatcatttaa 6757967  T
Q  571 aatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaagaagag 670  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||    
T  6757968 aatttggtccttggaccaacttaatcactgccacgtcactaatttgatgacgtggcaatcactgtcacacatgaaattccaattttgcccttaagaagag 6758067  T
Q  671 gacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||    
T  6758068 gacaaaatattgaagaaagaattggaaacccaggggtaaatttggaa 6758114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 162; E-Value: 4e-86
Query Start/End: Original strand, 465 - 717
Target Start/End: Complemental strand, 41930917 - 41930664
Alignment:
Q  465 tgaaggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaat 563  Q
    |||||| ||| ||||||| |||| | ||| ||||||||| ||||||||| ||||||||||||||||||||||||  || |||| || |||||||||||||    
T  41930917 tgaaggtttaatgatgtgattagtccttgtaattaggcgtcatttaaaaattcgtccctgtaattgctaatccttgcaatttagccttgcaattgttaat 41930818  T
Q  564 catttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgccctta 663  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||||||||||| ||||| ||||||| ||||||||||||||    
T  41930817 catttaaaatttggtccttggaccaacttaatcactaccacgtcactaatttgatgaggtggcaatcactgtcacacatgaaattccaattttgccctta 41930718  T
Q  664 agaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    |||||| ||||||||||||||||||||||||||||| ||||||| |||||||||    
T  41930717 agaagatgacaaaatattgaagaaagaattggaaactcaggggtaaatttggaa 41930664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 510 - 717
Target Start/End: Original strand, 3528915 - 3529122
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcac 609  Q
    |||||| ||||||||| |||||||||||  ||   || || |||||| |||||||||||||||||| |||||| |||||| |||||||||||||||||||    
T  3528915 aaaattggtccctgtatttgctaatccttgcaaactagccttgcaatcgttaatcatttaaaatttagtcctttgaccaacttaatcactgccacgtcac 3529014  T
Q  610 taatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtga 709  Q
    ||||||||||| ||| |||||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  3529015 taatttgatgatgtgacaatcactgccaaacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaa 3529114  T
Q  710 atttggaa 717  Q
    | ||||||    
T  3529115 aattggaa 3529122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 559 - 717
Target Start/End: Complemental strand, 6301880 - 6301722
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||     
T  6301880 ttaatcatttaaaatttcgtcctttgaccaatttaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacatgaaattccaattttgg 6301781  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  6301780 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaaattggaa 6301722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 545 - 717
Target Start/End: Original strand, 38475110 - 38475282
Alignment:
Q  545 taaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtga 644  Q
    ||||| ||||||  ||||||||||||||||| ||| || |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  38475110 taaccttgcaatcattaatcatttaaaatttcgtcatttgaccaacttaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacatga 38475209  T
Q  645 aatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  38475210 aattccaattttacccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaaattggaa 38475282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 562 - 717
Target Start/End: Original strand, 28770963 - 28771118
Alignment:
Q  562 atcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgccct 661  Q
    |||||||||||||| ||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||    
T  28770963 atcatttaaaatttagtcatttgaccaacttaatcactgccacgtcactaatttgatgacgtggcaatcactgccaaatatgaaatttcaattttgccct 28771062  T
Q  662 taagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  28771063 taagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaaattggaa 28771118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 559 - 717
Target Start/End: Complemental strand, 6150757 - 6150599
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| |||||| |||||| |||||||||||||||||||||||| |||||||||||||||||| |||||| | |||||||||||||||    
T  6150757 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaattcgatgacgtggcaatcactaccacacataaaatttcaattttgc 6150658  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| || ||||||    
T  6150657 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaagggtaaaattggaa 6150599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 559 - 717
Target Start/End: Complemental strand, 32242579 - 32242421
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |    
T  32242579 ttaatcatttaaaattttgtcctttgaccaacttaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacatgaaattccaatttttc 32242480  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||||| || ||||||    
T  32242479 ccttacgaagaggacaacatattgaagaaagaattggaaacccaggggtaaaattggaa 32242421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 559 - 707
Target Start/End: Original strand, 16156946 - 16157094
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| |||||| |||||| |||||||||||||||||||||||| |||||| ||||||||||| |||||| ||||||| |||||||||    
T  16156946 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaattcgatgacatggcaatcactcccacacatgaaattccaattttgc 16157045  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggt 707  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  16157046 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggt 16157094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 510 - 717
Target Start/End: Complemental strand, 186805 - 186598
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcac 609  Q
    |||||| ||||||||| ||||||||| |  ||   || || ||||||  ||||||||||||||||| |||||| |||||| ||||||| || ||||||||    
T  186805 aaaattggtccctgtatttgctaatctttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgaccaacttaatcattgtcacgtcac 186706  T
Q  610 taatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtga 709  Q
    ||||| |||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  186705 taattcgatgacgtggcaatcactaccacacatgaaatttcaagtttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaa 186606  T
Q  710 atttggaa 717  Q
    | ||||||    
T  186605 aattggaa 186598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 559 - 717
Target Start/End: Complemental strand, 8322741 - 8322583
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| |||||| |||||| |||||||||||| ||||||||||| |||||||||||||||||  |||||| ||||| |||||||||||    
T  8322741 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccgcgtcactaattcgatgacgtggcaatcaccaccacacatgaaaattcaattttgc 8322642  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  8322641 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaaattggaa 8322583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 559 - 717
Target Start/End: Complemental strand, 19517944 - 19517786
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| ||| || |||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||  |||||||||    
T  19517944 ttaatcatttaaaattttgtcttttgaccaacttaatcactgccatgtcactaatttgatgacgtggcaatcactaccacacatgaaataccaattttgc 19517845  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  19517844 ccttaagaagaggacaaaatagtgaagaaagaattggaaacccaggggtaaatttggaa 19517786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 559 - 717
Target Start/End: Original strand, 28269513 - 28269671
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| |||||| |||||| |||||||||||||||||||||||| ||||||||| |||||||| |||||| |||||||| ||||||||    
T  28269513 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaattcgatgacgtgacaatcactaccacacatgaaattttaattttgc 28269612  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || || ||||||    
T  28269613 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggagtaaaattggaa 28269671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 560 - 705
Target Start/End: Original strand, 5024111 - 5024256
Alignment:
Q  560 taatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcc 659  Q
    |||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||    
T  5024111 taatcatttaaaattttgtcctttgaccaacttaatcactgccacgtcactaatttgatgacgtggcaatcactgccatacgtgaaattccaatttttcc 5024210  T
Q  660 cttaagaagaggacaaaatattgaagaaagaattggaaacccaggg 705  Q
     ||||||||| |||||||||||||||||||||||||||||||||||    
T  5024211 gttaagaagaagacaaaatattgaagaaagaattggaaacccaggg 5024256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 559 - 707
Target Start/End: Original strand, 14194514 - 14194662
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| |||||| |||||| |||||||||||||| ||||||||| |||||||||||||||||| |||||| ||||||| |||||| ||    
T  14194514 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacatcactaattcgatgacgtggcaatcactaccacacatgaaattccaatttagc 14194613  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggt 707  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  14194614 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggt 14194662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 559 - 707
Target Start/End: Original strand, 19892399 - 19892547
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| |||||| || ||| |||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||| |||||||||    
T  19892399 ttaatcatttaaaatttcgtcctttgatcaacttaatcactgccacgtaactaatttgatgacgtggcaatcactggcacacatgaaattccaattttgc 19892498  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggt 707  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  19892499 ccttaagaagaggacaaaatattgaagaaagaattggaaacacaggggt 19892547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 510 - 717
Target Start/End: Original strand, 21265185 - 21265392
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcac 609  Q
    |||||| |||| |||| |||||||||||  ||   || || ||||||  ||||| ||||||||||| |||||| |||||| |||||||||||||||||||    
T  21265185 aaaattggtccatgtatttgctaatccttgcaaactagccttgcaatcattaattatttaaaatttcgtcctttgaccaacttaatcactgccacgtcac 21265284  T
Q  610 taatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtga 709  Q
    ||||| ||| |||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |    
T  21265285 taattcgataacgtggcaatcactaccacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccagtggtaa 21265384  T
Q  710 atttggaa 717  Q
    | ||||||    
T  21265385 aattggaa 21265392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 491 - 717
Target Start/End: Complemental strand, 39453705 - 39453479
Alignment:
Q  491 ttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaa 589  Q
    ||||||||||| | ||||||||| || ||||||||| | ||||||| |  ||   || || ||||||  ||||||||||||||||| |||||| ||||||    
T  39453705 ttgcaattaggggtcatttaaaaattggtccctgtattcgctaatctttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgaccaa 39453606  T
Q  590 attaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaag 689  Q
     |||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||| |||||||||||||||    
T  39453605 cttaatcactgccacgtcactaattcgatgacgtggcaatcactaccacacatgaaattccaattttgcccttaagaagaggac-aaatattgaagaaag 39453507  T
Q  690 aattggaaacccaggggtgaatttggaa 717  Q
    |||||||||| ||||||| || ||||||    
T  39453506 aattggaaactcaggggtaaaattggaa 39453479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 559 - 717
Target Start/End: Complemental strand, 17202736 - 17202578
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| ||| || |||||| |||||||||||||||||||||||| ||||| |||||||||||| |||||| ||||||| |||||||||    
T  17202736 ttaatcatttaaaatttcgtcatttgaccaacttaatcactgccacgtcactaattcgatgatgtggcaatcactaccacacatgaaattccaattttgc 17202637  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| || ||||||    
T  17202636 ccttaagaagaggacaaaatattgaagaaagaattggaaatccaggggtaaaattggaa 17202578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 559 - 717
Target Start/End: Complemental strand, 27587452 - 27587296
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| |||||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||| | || ||||||| |||||||||    
T  27587452 ttaatcatttaaaatttagtcctttgaccaacttaatcactgctacgtcactaatttgatgacgtggcaatcactgctaaacatgaaattccaattttgc 27587353  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||| || ||||||    
T  27587352 ccttaagaagaggacaaaatattgaag--agaattggaaacccaggggtaaaattggaa 27587296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 559 - 717
Target Start/End: Complemental strand, 16083280 - 16083122
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| ||  || |||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||| ||||||| | |||||||    
T  16083280 ttaatcatttaaaatttcgttatttgaccaacttaatcactgccatgtcactaatttgatgacgtggcaatcactgacacacatgaaattcctattttgc 16083181  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| || ||||||    
T  16083180 ccttaagaagatgacaaaatattgaagaaagaattggaaacccaggggtaaaattggaa 16083122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 559 - 717
Target Start/End: Complemental strand, 18670502 - 18670344
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| ||| ||  ||||| |||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||| |||||||||    
T  18670502 ttaatcatttaaaatttcgtcatttaaccaacttaatcactgccacgtcactaattcgatgacgtggcaatcactaccacacatgaaattccaattttgc 18670403  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||||| || ||||||    
T  18670402 ccttaagaagagtacaaaatattgaagaaagaattggaaactcaggggtaaaattggaa 18670344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 510 - 717
Target Start/End: Complemental strand, 11762103 - 11761897
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcac 609  Q
    |||||| ||||||||| | |||||||||  ||   || || ||||||  ||||||||||||||||| |||||| |||||| |||||||||||||||||||    
T  11762103 aaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttagtcctttgaccaacttaatcactgccacgtcac 11762004  T
Q  610 taatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtga 709  Q
    ||||||||||| |||||||||||||||| || ||||||| ||||||||||||||||||||||||||||||||||| |||| |||||||| || ||||| |    
T  11762003 taatttgatgatgtggcaatcactgccaaacatgaaattccaattttgcccttaagaagaggacaaaatattgaa-aaaggattggaaatcctggggtaa 11761905  T
Q  710 atttggaa 717  Q
    | ||||||    
T  11761904 aattggaa 11761897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 559 - 717
Target Start/End: Original strand, 29646453 - 29646611
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    |||||||||||||||||  ||||| |||||| |||||||||||||||||||||||| |||||||| || |||||| |||||| ||||||| ||||||| |    
T  29646453 ttaatcatttaaaattttatcctttgaccaacttaatcactgccacgtcactaattcgatgacgttgcgatcactaccacacatgaaattccaatttttc 29646552  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| || ||||||    
T  29646553 ccttaagaagaggacaaaatattgaagaaagaattggaaatccaggggtaaaattggaa 29646611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 559 - 699
Target Start/End: Complemental strand, 11047774 - 11047634
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| |||||| |||||| ||||||||||||||||||||||||  ||||||||||||||||| |||  | ||||||| |||||||||    
T  11047774 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaattcaatgacgtggcaatcactaccatgcatgaaattccaattttgc 11047675  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaac 699  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  11047674 ccttaagaagaggacaaaatattgaagaaagaattggaaac 11047634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 559 - 717
Target Start/End: Original strand, 13362318 - 13362477
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| |||||  |||||| ||||||||||||||||||||||||||||||||||  |||||| | ||||| ||||||| |||||||||    
T  13362318 ttaatcatttaaaatttcgtcctctgaccaacttaatcactgccacgtcactaatttgatgacgtgcaaatcacagacacacatgaaattccaattttgc 13362417  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattgga-aacccaggggtgaatttggaa 717  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||| || ||||||    
T  13362418 ccttaagaagaggacaaaatattgaagaaagaattggataacctaggggtaaaattggaa 13362477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 559 - 717
Target Start/End: Complemental strand, 5994226 - 5994068
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| |||||| |||||| ||||||||||||| |||||||||||||||||||| ||||||||  ||||| ||||||| ||||||| |    
T  5994226 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccatgtcactaatttgatgacgtgacaatcactatcacacatgaaattccaatttttc 5994127  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    |||||||||||||| ||||||||||  |||||||||||||||||||||| || ||||||    
T  5994126 ccttaagaagaggataaaatattgagaaaagaattggaaacccaggggtaaaattggaa 5994068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 559 - 694
Target Start/End: Complemental strand, 38442404 - 38442269
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    |||| |||||||||||| |||||| |||||| |||||||||| ||| ||||||||||||||| ||| ||||||||||||||||||||||| ||| |||||    
T  38442404 ttaaccatttaaaatttcgtcctttgaccaacttaatcactgtcacatcactaatttgatgatgtgacaatcactgccacacgtgaaattccaactttgc 38442305  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattg 694  Q
    ||||||||||||||||||||||||||||||||||||    
T  38442304 ccttaagaagaggacaaaatattgaagaaagaattg 38442269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 559 - 717
Target Start/End: Original strand, 20814226 - 20814384
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| ||||||  ||||| |||||||||||||||||||||||| ||| ||||| | |||||| |||||| |||||||||||||||||    
T  20814226 ttaatcatttaaaatttcgtcctttaaccaacttaatcactgccacgtcactaattcgatcacgtgacgatcactaccacacatgaaatttcaattttgc 20814325  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    |||||||||||||||||||||||||| ||||||||  ||| |||||||| || ||||||    
T  20814326 ccttaagaagaggacaaaatattgaaaaaagaatttaaaatccaggggtaaaattggaa 20814384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 466 - 580
Target Start/End: Complemental strand, 31482802 - 31482687
Alignment:
Q  466 gaaggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatc 564  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||    
T  31482802 gaaggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaatttgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatc 31482703  T
Q  565 atttaaaatttggtcc 580  Q
    ||||||||||| ||||    
T  31482702 atttaaaatttcgtcc 31482687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 468 - 605
Target Start/End: Original strand, 1505966 - 1506104
Alignment:
Q  468 aggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcat 566  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| |    
T  1505966 aggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgt 1506065  T
Q  567 ttaaaatttggtccttggaccaaattaatcactgccacg 605  Q
    ||||||||| |||| |   || | |||||||||||||||    
T  1506066 ttaaaatttcgtccctctccccacttaatcactgccacg 1506104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 559 - 717
Target Start/End: Complemental strand, 10684275 - 10684118
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||| ||| ||| || |||||| ||||||||||  || ||||||||||||| |||||||||||||| |||||| ||||||| |||||||||    
T  10684275 ttaatcatttaaagtttcgtcatttgaccaacttaatcactgtaacatcactaatttgataacgtggcaatcactaccacacatgaaattccaattttgc 10684176  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||||| || ||||||    
T  10684175 ccttaagaagaggac-aaatattgaagaaagaattggaaacacaggggtaaaattggaa 10684118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 466 - 605
Target Start/End: Complemental strand, 297414 - 297274
Alignment:
Q  466 gaaggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatc 564  Q
    ||||| |||||||||||||||||| ||| ||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  297414 gaaggtttattgatgtgtttagcccttgtaattaggcgacatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatc 297315  T
Q  565 atttaaaatttggtccttggaccaaattaatcactgccacg 605  Q
    ||||||||||| |||| |   || | |||||||||||||||    
T  297314 atttaaaatttcgtccctctccccacttaatcactgccacg 297274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 559 - 680
Target Start/End: Original strand, 35920319 - 35920440
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| |||||| |||||| ||||||| |  ||||||||||||| |||||||||||||||||| |||||| ||||||| |||||||||    
T  35920319 ttaatcatttaaaatttcgtcctttgaccaacttaatcaatatcacgtcactaattcgatgacgtggcaatcactaccacacatgaaattccaattttgc 35920418  T
Q  659 ccttaagaagaggacaaaatat 680  Q
    ||||||||||||||||||||||    
T  35920419 ccttaagaagaggacaaaatat 35920440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 627 - 717
Target Start/End: Original strand, 24547315 - 24547405
Alignment:
Q  627 aatcactgccacacgtgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  24547315 aatcactgccacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaaattggaa 24547405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 578 - 707
Target Start/End: Complemental strand, 18247401 - 18247273
Alignment:
Q  578 tccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaagaagaggacaaaa 677  Q
    ||||| || ||| |||||||||||||||||| |||||  |||||||| |||||||| |||||| ||||||| |||||||||||||||||||||||| |||    
T  18247401 tcctttgatcaacttaatcactgccacgtcattaattcaatgacgtgacaatcactaccacacatgaaattccaattttgcccttaagaagaggac-aaa 18247303  T
Q  678 tattgaagaaagaattggaaacccaggggt 707  Q
    |||| |||||||||||| ||||||||||||    
T  18247302 tattaaagaaagaattgaaaacccaggggt 18247273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 627 - 717
Target Start/End: Complemental strand, 35512417 - 35512327
Alignment:
Q  627 aatcactgccacacgtgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    ||||||||||||||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  35512417 aatcactgccacacgtgaaattctaatttttcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaaattggaa 35512327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 559 - 656
Target Start/End: Original strand, 6301634 - 6301731
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    ||||| ||||||||||| |||||| |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||    
T  6301634 ttaattatttaaaatttcgtcctttgaccaatttaatcactgccacgtcactaatttgatgacgtgacaatcactgccacacatgaaattccaatttt 6301731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 627 - 717
Target Start/End: Original strand, 27937178 - 27937268
Alignment:
Q  627 aatcactgccacacgtgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    ||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || ||||||    
T  27937178 aatcactgcaacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattgaaaacccaggggtaaaattggaa 27937268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 627 - 717
Target Start/End: Complemental strand, 13963132 - 13963043
Alignment:
Q  627 aatcactgccacacgtgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| |||||| |||||||| || ||||||    
T  13963132 aatcactgccacacgtgaaattccaattttgcccttaagaagaggacaaaatattgaa-aaagaactggaaatccaggggtaaaattggaa 13963043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 559 - 656
Target Start/End: Complemental strand, 43159151 - 43159054
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    ||||||||||||||||| |||||| |||||| |||||||||||||||||||||||| |||||||||  ||||||| |||||| ||||||| |||||||    
T  43159151 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaattcgatgacgtgataatcactaccacacatgaaattccaatttt 43159054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 467 - 605
Target Start/End: Complemental strand, 6758264 - 6758125
Alignment:
Q  467 aaggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatca 565  Q
    |||||||| ||||||| |||| | ||||||||||||| | ||||||| |||||||||||||||| |||| ||| || ||||||| |||||||||||||||    
T  6758264 aaggcttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattcgtccctgtaattgttaattctggcaatttaaccttgcaattgttaatca 6758165  T
Q  566 tttaaaatttggtccttggaccaaattaatcactgccacg 605  Q
    |||||||||| |||| |   || | |||||||||||||||    
T  6758164 tttaaaatttcgtccctctccccacttaatcactgccacg 6758125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 510 - 656
Target Start/End: Original strand, 5993931 - 5994077
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcac 609  Q
    |||||| ||||||||||| |||||| ||| || |||| || |||| |  ||||||||||||||||| |||| |   || | ||||||||||||| |||||    
T  5993931 aaaattggtccctgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccatgtcac 5994030  T
Q  610 taatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    ||||||||||||||| |||||||||||| || ||||||| |||||||    
T  5994031 taatttgatgacgtgacaatcactgccatacatgaaattccaatttt 5994077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 510 - 656
Target Start/End: Original strand, 13962906 - 13963052
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcac 609  Q
    |||||| ||||||||||||||||||||||  | |||| || |||| |  ||||||||||||||||| |||| |   |  | |||||||||| ||||||||    
T  13962906 aaaattggtccctgtaattgctaatcctggtaatttacccttgcattgtttaatcatttaaaatttcgtccctctcctcacttaatcactgtcacgtcac 13963005  T
Q  610 taatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    ||||||||||||||||||||||||  ||||| ||||||| |||||||    
T  13963006 taatttgatgacgtggcaatcactatcacacatgaaattccaatttt 13963052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 510 - 656
Target Start/End: Complemental strand, 19892694 - 19892548
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcac 609  Q
    |||||| ||| ||||||| | ||||||| ||| |||| || |||| |  ||||||||||||||||| ||| ||   || | |||||||||||||||||||    
T  19892694 aaaattggtctctgtaatcgttaatcctaacaatttacccttgcattgtttaatcatttaaaatttcgtcattctccccacttaatcactgccacgtcac 19892595  T
Q  610 taatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    ||||||||||||||||||||||||| ||||| ||||||  |||||||    
T  19892594 taatttgatgacgtggcaatcactgtcacacatgaaatcccaatttt 19892548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 510 - 656
Target Start/End: Original strand, 39453342 - 39453488
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcac 609  Q
    |||||| ||| ||||||| |||||||||| || |||| || |||| |  ||||||||||||||||| |||| |   || | |||||||||| || |||||    
T  39453342 aaaattggtctctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactggcatgtcac 39453441  T
Q  610 taatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    |||||||||||||||||||||||||||| || ||||||| |||||||    
T  39453442 taatttgatgacgtggcaatcactgccatacatgaaattccaatttt 39453488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 510 - 656
Target Start/End: Original strand, 17202441 - 17202587
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcac 609  Q
    |||||| ||| ||||||| ||||||||||||| |||| || |||| |  |||| |||||||||||| ||||     || | ||||||||||||| |||||    
T  17202441 aaaattggtcactgtaatcgctaatcctgacaatttacccttgcattgtttaagcatttaaaatttcgtccccctccccacttaatcactgccatgtcac 17202540  T
Q  610 taatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    ||||||||||||||| |||||||||||| || ||||||| |||||||    
T  17202541 taatttgatgacgtgacaatcactgccatacatgaaattccaatttt 17202587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 510 - 656
Target Start/End: Original strand, 35512190 - 35512336
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcac 609  Q
    |||||| ||||||||||| |||||||||| || |||| || |||| |  ||||||||||||||||| |||| |   || | |||||||||||||| ||||    
T  35512190 aaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacatcac 35512289  T
Q  610 taatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    |||||||||||| || ||||| ||| ||||| ||||||| |||||||    
T  35512290 taatttgatgacatgacaatccctgtcacacatgaaattccaatttt 35512336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 591 - 667
Target Start/End: Original strand, 12904877 - 12904953
Alignment:
Q  591 ttaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaagaa 667  Q
    ||||||| || ||||||||||||||||| ||||  ||||||||||||||| ||||||||||||||||||||||||||    
T  12904877 ttaatcaatgtcacgtcactaatttgataacgttacaatcactgccacacatgaaatttcaattttgcccttaagaa 12904953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 467 - 605
Target Start/End: Original strand, 41930514 - 41930653
Alignment:
Q  467 aaggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatca 565  Q
    |||||||| ||||||| |||| | ||||||||||  | | ||||||| || |||||||||||||||||||||| || |||| || |||||||||||||||    
T  41930514 aaggcttaatgatgtgattagtccttgcaattagaggtcgtttaaaaatttgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatca 41930613  T
Q  566 tttaaaatttggtccttggaccaaattaatcactgccacg 605  Q
    |||||||||| |||| |   || | |||||||||||||||    
T  41930614 tttaaaatttcgtccctctccccacttaatcactgccacg 41930653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 491 - 656
Target Start/End: Original strand, 11047460 - 11047625
Alignment:
Q  491 ttgcaattaggcggca-tttaaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaa 589  Q
    ||||||||||| | || ||||||| | ||||| ||||| ||||||| || || |||| || |||| |  ||||||||||||||||| |||  |   || |    
T  11047460 ttgcaattaggagtcagtttaaaaattgtccc-gtaatcgctaatcttggcaatttacccttgcattgtttaatcatttaaaatttcgtctctctcccca 11047558  T
Q  590 attaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
     ||||||||||||| ||||||||||||||||||||||||||||||||| || | |||||||||||||    
T  11047559 cttaatcactgccatgtcactaatttgatgacgtggcaatcactgccatacataaaatttcaatttt 11047625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 510 - 656
Target Start/End: Complemental strand, 13362614 - 13362468
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcac 609  Q
    |||||| |||| |||||| ||||||| || || |||| || |||| |  ||||||||||||||||| |||  |   || | ||||||||||| || ||||    
T  13362614 aaaattggtccttgtaatcgctaatcatggcaatttacccttgcattgtttaatcatttaaaatttagtctctctccccacttaatcactgctacatcac 13362515  T
Q  610 taatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    ||||||||||||||||||||||||||||| | ||||||| |||||||    
T  13362514 taatttgatgacgtggcaatcactgccacgcatgaaattccaatttt 13362468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 522 - 648
Target Start/End: Complemental strand, 14194797 - 14194671
Alignment:
Q  522 tgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgac 621  Q
    ||||||| ||||||||| || |||| || |||| |  ||||||||||||||||| |||| |   || | ||||||||||| | |||||||||||||||||    
T  14194797 tgtaattactaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgctatgtcactaatttgatgac 14194698  T
Q  622 gtggcaatcactgccacacgtgaaatt 648  Q
    |||||||||||||||| || |||||||    
T  14194697 gtggcaatcactgccatacatgaaatt 14194671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 510 - 656
Target Start/End: Complemental strand, 16157241 - 16157095
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcac 609  Q
    |||||| |||||| |||| | ||||||||||| |||| || |||| |  ||||||||||||||||| |||| |   || | |||||| |||||| |||||    
T  16157241 aaaattggtccctataatcgttaatcctgacaatttacccttgcattgtttaatcatttaaaattttgtccctctccccacttaatccctgccatgtcac 16157142  T
Q  610 taatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    |||||||||||||  |||||||||||||  | |||||||||||||||    
T  16157141 taatttgatgacgcagcaatcactgccatgcatgaaatttcaatttt 16157095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 518 - 656
Target Start/End: Original strand, 32242292 - 32242430
Alignment:
Q  518 tccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttga 617  Q
    |||||||||| ||||||| || || ||||  | |||| |  ||||||||||||||||| |||| |   || | |||||||||||||||||||||||||||    
T  32242292 tccctgtaatagctaatcatggcaatttactcttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaatttga 32242391  T
Q  618 tgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    ||||||| ||||||||| |||||  |||||| |||||||    
T  32242392 tgacgtgacaatcactgtcacacacgaaattccaatttt 32242430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 522 - 656
Target Start/End: Original strand, 38442122 - 38442256
Alignment:
Q  522 tgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgac 621  Q
    |||||| ||||||||||||| ||||  | |||| |  ||||||||||||||||| |||| |   || | |||||||||||||| | ||||||||||||||    
T  38442122 tgtaatcgctaatcctgacaatttactcttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacataactaatttgatgac 38442221  T
Q  622 gtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    ||||||||||||| || || ||||||| |||||||    
T  38442222 gtggcaatcactgtcatacatgaaattccaatttt 38442256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 468 - 600
Target Start/End: Complemental strand, 17544475 - 17544342
Alignment:
Q  468 aggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcat 566  Q
    ||||||| |||||||||| | | ||||||||||||| ||||||||| || || |||||||| | |||||||| || |||| || |||| |  ||||||||    
T  17544475 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagttcctgtaatcgttaatcctggcaatttacccttgcattgtttaatcat 17544376  T
Q  567 ttaaaatttggtccttggaccaaattaatcactg 600  Q
    ||||||||| |||||| |||||| ||||||||||    
T  17544375 ttaaaattttgtcctttgaccaacttaatcactg 17544342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 507 - 656
Target Start/End: Complemental strand, 29646751 - 29646602
Alignment:
Q  507 tttaaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgt 606  Q
    ||||||||| || | |||||| ||||||||||||| |||| || |||| |  ||||||||||||||||| |||| |   || | |||||||||| || ||    
T  29646751 tttaaaattggtgcatgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgtcatgt 29646652  T
Q  607 cactaatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    |||||||||||||||||| |||||||| ||| || |||| || |||||||    
T  29646651 cactaatttgatgacgtgacaatcactaccatacatgaatttccaatttt 29646602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 469 - 608
Target Start/End: Original strand, 8875449 - 8875589
Alignment:
Q  469 ggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatt 567  Q
    |||||| |||||||||| | | ||||||||| ||| ||||||||| || ||||||||||| | |||||||| || ||||  | |||| |  |||||||||    
T  8875449 ggcttaatgatgtgtttcgtccttgcaattaagcgtcatttaaaaattagtccctgtaatcgttaatcctggcaatttacacttgcattgtttaatcatt 8875548  T
Q  568 taaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    |||||||| || ||| |||||| ||||||||||||||||||    
T  8875549 taaaatttcgttctttgaccaacttaatcactgccacgtca 8875589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 522 - 661
Target Start/End: Complemental strand, 5024392 - 5024253
Alignment:
Q  522 tgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgac 621  Q
    |||||| ||||||||||||| |||| |  |||| |  ||||||||||||||||| || | |   || | |||||||||||||| ||||||||||||||||    
T  5024392 tgtaatcgctaatcctgacaatttaccattgcattgtttaatcatttaaaatttcgttcctctccccacttaatcactgccacatcactaatttgatgac 5024293  T
Q  622 gtggcaatcactgccacacgtgaaatttcaattttgccct 661  Q
    | | ||||||||| ||||| ||||||| ||||||| ||||    
T  5024292 gcgacaatcactgtcacacatgaaattccaattttaccct 5024253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 593 - 656
Target Start/End: Complemental strand, 27937322 - 27937259
Alignment:
Q  593 aatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||| ||||||| |||||||    
T  27937322 aatcactgccacgtcactaatttgatgacgtggcaatcactatcacacatgaaattccaatttt 27937259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 467 - 608
Target Start/End: Complemental strand, 33871766 - 33871624
Alignment:
Q  467 aaggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatca 565  Q
    |||||||| |||||||||| | | ||||||||||||| ||||||||| || ||| |||||||   |||||||| || |||| || |||| |  |||||||    
T  33871766 aaggcttaatgatgtgtttcgtccttgcaattaggcgccatttaaaaattagtctctgtaatcagtaatcctggcaatttacccttgcattgtttaatca 33871667  T
Q  566 tttaaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    |||||||||| ||| || |||||| ||||||||||| ||||||    
T  33871666 tttaaaatttcgtcatttgaccaacttaatcactgctacgtca 33871624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 559 - 656
Target Start/End: Original strand, 186510 - 186607
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    ||||||||||||||||| |||| |   || | ||||||||| ||| ||||||||||||||||||||||||||||| ||| || ||||||| |||||||    
T  186510 ttaatcatttaaaatttcgtccctccccccacttaatcactaccatgtcactaatttgatgacgtggcaatcactaccatacatgaaattccaatttt 186607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 591 - 656
Target Start/End: Original strand, 10684062 - 10684127
Alignment:
Q  591 ttaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    |||||||||| || ||||||||||||||||||||||||||||||||| || ||||||| |||||||    
T  10684062 ttaatcactgtcatgtcactaatttgatgacgtggcaatcactgccatacatgaaattccaatttt 10684127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 469 - 608
Target Start/End: Original strand, 33871339 - 33871479
Alignment:
Q  469 ggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatt 567  Q
    |||||| |||||||||| | | ||||||||| | | ||||||||| || ||||||||||| |||||| ||| || |||| || |||| |  |||||||||    
T  33871339 ggcttaatgatgtgttttgtccttgcaattaagtgtcatttaaaaattagtccctgtaatcgctaattctggcaatttacccttgcattgtttaatcatt 33871438  T
Q  568 taaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    |||||||| |||||| |||||| |||||||| |||| ||||    
T  33871439 taaaatttcgtcctttgaccaacttaatcaccgccaagtca 33871479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 510 - 600
Target Start/End: Original strand, 17544090 - 17544180
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactg 600  Q
    |||||| ||||||||||||||||||||||||| ||||  | |||| |  ||||||||||||||||| ||| || |||||| ||||||||||    
T  17544090 aaaattagtccctgtaattgctaatcctgacaatttactcttgcattgtttaatcatttaaaattttgtcatttgaccaacttaatcactg 17544180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 510 - 656
Target Start/End: Complemental strand, 20814521 - 20814375
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcac 609  Q
    |||||| ||| ||||||| |||||||||  || ||||  | |||| |  ||||||||||||||||| |||| |   || | ||||||||||||| |||||    
T  20814521 aaaattggtcactgtaatcgctaatcctagcaatttacacttgcattgtttaatcatttaaaattttgtccctctccctacttaatcactgccatgtcac 20814422  T
Q  610 taatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    |||||||||||| || ||||||||| || || ||||||| |||||||    
T  20814421 taatttgatgacatgacaatcactgtcatacatgaaattccaatttt 20814375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 591 - 656
Target Start/End: Original strand, 18247207 - 18247272
Alignment:
Q  591 ttaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    |||||||| |||| |||||||||||||||||||||||||||||| || || | |||||||||||||    
T  18247207 ttaatcaccgccatgtcactaatttgatgacgtggcaatcactgtcatacataaaatttcaatttt 18247272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 469 - 608
Target Start/End: Original strand, 20152781 - 20152921
Alignment:
Q  469 ggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatt 567  Q
    |||||| |||||||||| | |  |||||||| ||| ||||||||| || ||| ||||||| ||||||||||  | |||| || |||| |  |||||||||    
T  20152781 ggcttaatgatgtgtttcgtccatgcaattaagcgtcatttaaaaattagtctctgtaatcgctaatcctggaaatttacccttgcattgtttaatcatt 20152880  T
Q  568 taaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    |||||||| |||||| |||||| ||||||||| ||| ||||    
T  20152881 taaaatttcgtcctttgaccaacttaatcactaccaagtca 20152921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 522 - 613
Target Start/End: Original strand, 5255072 - 5255162
Alignment:
Q  522 tgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaat 613  Q
    |||||| |||||||||| ||  |||||| |||| || ||||||||||||||||| ||| || |||||| |||||||||| ||||||||||||    
T  5255072 tgtaatcgctaatcctg-caaattaaccttgcatttattaatcatttaaaatttcgtcatttgaccaacttaatcactgtcacgtcactaat 5255162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 559 - 626
Target Start/End: Original strand, 11740778 - 11740845
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggc 626  Q
    ||||||||||||||||| |||||| |||| | ||||| |||| ||||||| |||||||||||||||||    
T  11740778 ttaatcatttaaaattttgtcctttgacccagttaatgactgtcacgtcattaatttgatgacgtggc 11740845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 510 - 653
Target Start/End: Original strand, 20840575 - 20840718
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcac 609  Q
    |||||| || |||||||| | |||||||  || |||| || |||| |  ||||| ||||||||||| |||| |   || | |||||||||||||||||||    
T  20840575 aaaattggtacctgtaatcgttaatcctagcaatttacccttgcattgtttaatgatttaaaattttgtccctctccccacttaatcactgccacgtcac 20840674  T
Q  610 taatttgatgacgtggcaatcactgccacacgtgaaatttcaat 653  Q
    ||||| ||| ||||| | |||||| |||||| ||||||||||||    
T  20840675 taattcgatcacgtgacgatcactaccacacatgaaatttcaat 20840718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 559 - 656
Target Start/End: Original strand, 8322495 - 8322592
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    ||||||||||||||||| |||| |   || | |||||||||| ||  |||||||||||||||||| ||||||||||||| || | ||||| |||||||    
T  8322495 ttaatcatttaaaatttcgtccctctccccacttaatcactgtcatttcactaatttgatgacgttgcaatcactgccatacataaaattccaatttt 8322592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 468 - 608
Target Start/End: Complemental strand, 20153342 - 20153204
Alignment:
Q  468 aggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcat 566  Q
    ||||||| |||||||||| | | ||||||||||| | ||||||||| || |||| |||||| |||||||    || |||| || |||| |  ||||||||    
T  20153342 aggcttaatgatgtgtttcgtccttgcaattaggtgtcatttaaaaattagtccttgtaatcgctaatcg---caatttacccttgcattgtttaatcat 20153246  T
Q  567 ttaaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    |||||||||  ||||| |||||| ||||||||||| ||||||    
T  20153245 ttaaaatttcatcctttgaccaacttaatcactgctacgtca 20153204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 510 - 580
Target Start/End: Original strand, 11761791 - 11761861
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtcc 580  Q
    |||||| ||||||||||| |||||||||| || |||| ||||||| |  ||||||||||||||||| ||||    
T  11761791 aaaattggtccctgtaatcgctaatcctggcaatttacccctgcattgtttaatcatttaaaatttcgtcc 11761861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 591 - 656
Target Start/End: Complemental strand, 4700416 - 4700351
Alignment:
Q  591 ttaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    ||||| |||||||| |||  |||||||||||||||||||||||| ||||| | ||||| |||||||    
T  4700416 ttaattactgccacatcataaatttgatgacgtggcaatcactgtcacacataaaattccaatttt 4700351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 591 - 656
Target Start/End: Complemental strand, 21265448 - 21265383
Alignment:
Q  591 ttaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    ||||||||||| | ||||||||||||||||| || ||||||||| || || ||||||| |||||||    
T  21265448 ttaatcactgctatgtcactaatttgatgacatgacaatcactgtcatacatgaaattccaatttt 21265383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 510 - 605
Target Start/End: Original strand, 27587190 - 27587285
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacg 605  Q
    |||||| ||||||||||| |||||||||| || |||| |||||||    ||||||||||||||||| |||| |   || | |||||||||||||||    
T  27587190 aaaattggtccctgtaatcgctaatcctggcaatttacccctgcatcgtttaatcatttaaaatttcgtccctctccccatttaatcactgccacg 27587285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 510 - 580
Target Start/End: Complemental strand, 35920570 - 35920500
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtcc 580  Q
    |||||| ||||||||||| ||||||||||||| |||| || | || |  ||||||||||||||||| ||||    
T  35920570 aaaattggtccctgtaatcgctaatcctgacaatttatccttccattgtttaatcatttaaaatttcgtcc 35920500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 510 - 580
Target Start/End: Original strand, 42063296 - 42063366
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtcc 580  Q
    |||||| ||| ||||||| |||||||||| ||  ||  |||||||| ||||||||||||||||||| ||||    
T  42063296 aaaattggtctctgtaatcgctaatcctggcaaattgcccctgcaaatgttaatcatttaaaattttgtcc 42063366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #84
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 559 - 604
Target Start/End: Complemental strand, 13963166 - 13963121
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccac 604  Q
    ||||||||||||||||| || ||| |||||| ||||||||||||||    
T  13963166 ttaatcatttaaaatttcgttctttgaccaacttaatcactgccac 13963121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #85
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 559 - 608
Target Start/End: Original strand, 21287834 - 21287883
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    ||||||||||||||||| ||| || |||||| ||||||||| ||||||||    
T  21287834 ttaatcatttaaaatttcgtcatttgaccaacttaatcactaccacgtca 21287883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #86
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 559 - 604
Target Start/End: Original strand, 24547281 - 24547326
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccac 604  Q
    ||||||||||||||||| ||| || |||||| ||||||||||||||    
T  24547281 ttaatcatttaaaatttcgtcatttgaccaatttaatcactgccac 24547326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 211; Significance: 1e-115; HSPs: 83)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 472 - 717
Target Start/End: Original strand, 44406860 - 44407106
Alignment:
Q  472 ttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaa 570  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  44406860 ttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtttaa 44406959  T
Q  571 aatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaagaagag 670  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||    
T  44406960 aatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgtcacacatgaaattccaattttgcccttaagaagag 44407059  T
Q  671 gacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||    
T  44407060 gacaaaatattgaagaaagaattggaaacccaggggtaaatttggaa 44407106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 467 - 717
Target Start/End: Original strand, 40775648 - 40775899
Alignment:
Q  467 aaggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatca 565  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||| |||||||| |||||||||||||||||||||||||     
T  40775648 aaggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgttcctgtaattgttaatcctggcattttaaccctgcaattgttaatcg 40775747  T
Q  566 tttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaag 665  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||    
T  40775748 tttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgtcacacatgaaattacaattttgcccttaag 40775847  T
Q  666 aagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  40775848 aagaggacaaaatattgaagaaagaattggaaacccaggggtaaatttggaa 40775899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 467 - 717
Target Start/End: Original strand, 38845297 - 38845548
Alignment:
Q  467 aaggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatca 565  Q
    |||| ||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||     
T  38845297 aaggtttattgatgtgtttaacccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcg 38845396  T
Q  566 tttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaag 665  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||| ||||||||||||||||    
T  38845397 tttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgttacacatgaaattccaattttgcccttaag 38845496  T
Q  666 aagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  38845497 aagaggacaaaatattgaagaaagaattggaaacccaggggtaaatttggaa 38845548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 467 - 717
Target Start/End: Complemental strand, 2266891 - 2266640
Alignment:
Q  467 aaggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatca 565  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||     
T  2266891 aaggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcg 2266792  T
Q  566 tttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaag 665  Q
    ||||||||||| ||||| |||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||    
T  2266791 tttaaaatttgatcctttgaccaaattaatcacttccacatcactaatttgatgacgtggcaatcactgtcacacatgaaattccaattttgcccttaag 2266692  T
Q  666 aagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  2266691 aagaggacaaaatattgaagaaagaattggaaacccaggggtaaatttggaa 2266640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 467 - 717
Target Start/End: Original strand, 3041454 - 3041705
Alignment:
Q  467 aaggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatca 565  Q
    |||| |||||||||||||||||| ||||||||| ||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||     
T  3041454 aaggtttattgatgtgtttagcccttgcaattaagcggcatttaaaaattcgtccatgtaattgctaatcctggcattttaaccctgcaattgttaatcg 3041553  T
Q  566 tttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaag 665  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||| |||||||| |||||||    
T  3041554 tttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgtcacacataaaattccaattttgaccttaag 3041653  T
Q  666 aagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  3041654 aagaggacaaaatattgaagaaagaattggaaacacaggggtaaatttggaa 3041705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 468 - 717
Target Start/End: Complemental strand, 11675092 - 11674842
Alignment:
Q  468 aggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcat 566  Q
    ||||||| ||||||| |||| | ||||||||||||| ||||||||| ||||||||||||||||||||||||| || |||| || ||||||||||||||||    
T  11675092 aggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcat 11674993  T
Q  567 ttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaaga 666  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||    
T  11674992 ttaaaatttggtccttggaccaacttaatcactgccacgtcactaatttgatgacgtggcaatcactgtcacacatgaaattccaattttgcccttaaga 11674893  T
Q  667 agaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  11674892 agaggacaaaatattaaagaaagaattggaaacccaggggtaaatttggaa 11674842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 467 - 717
Target Start/End: Complemental strand, 36325633 - 36325382
Alignment:
Q  467 aaggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatca 565  Q
    |||| ||| ||||||| |||| | ||||||||||||| ||||||||| |||||| ||||||||| |||||||| || |||| || |||||||||||||||    
T  36325633 aaggtttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtctctgtaattgttaatcctggcaatttagccttgcaattgttaatca 36325534  T
Q  566 tttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaag 665  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  36325533 tttaaaatttggtccttggaccaacttaatcactgccacgtcactaacttgatgacgtggcaatcactgtcacacatgaaatttcaattttgcccttaag 36325434  T
Q  666 aagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  36325433 aagaggacaaaatattgaagaaagaattggaaacccaggggtaaatttggaa 36325382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 559 - 717
Target Start/End: Original strand, 1425144 - 1425302
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| |||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||| |||||||||    
T  1425144 ttaatcatttaaaatttagtcctttgaccaacttaatcattgccacgtcactaatttgatgacgtggcaatcactgccaaacatgaaattccaattttgc 1425243  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  1425244 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaaattggaa 1425302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 559 - 717
Target Start/End: Original strand, 12199041 - 12199199
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| |||||| |||||| |||||||||| ||||||||||||||||||||||||||||||| ||||||| ||||||| |||||||||    
T  12199041 ttaatcatttaaaatttcgtcctttgaccaatttaatcactgtcacgtcactaatttgatgacgtggcaatcacggccacacatgaaattccaattttgc 12199140  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  12199141 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaaattggaa 12199199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 559 - 717
Target Start/End: Original strand, 12443469 - 12443627
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| |||||| |||||| |||||||||| ||||||||||||||||||||||||||||||| ||||||| ||||||| |||||||||    
T  12443469 ttaatcatttaaaatttcgtcctttgaccaatttaatcactgtcacgtcactaatttgatgacgtggcaatcacggccacacatgaaattccaattttgc 12443568  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  12443569 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaaattggaa 12443627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 559 - 712
Target Start/End: Complemental strand, 13186396 - 13186243
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| ||| || |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  13186396 ttaatcatttaaaatttcgtcatttgaccaagttaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacatgaaattccaattttgc 13186297  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatt 712  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  13186296 ccttaagaagaggacaaaatattgaagaaagaattggaaaccccggggtaaatt 13186243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 559 - 717
Target Start/End: Complemental strand, 38956009 - 38955851
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| |||||| || ||| |||||||||| |||||||||||||||||||||||||||||||||||| || ||||||| |||||||||    
T  38956009 ttaatcatttaaaatttagtcctttgatcaacttaatcactgtcacgtcactaatttgatgacgtggcaatcactgccaaacatgaaattccaattttgc 38955910  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  38955909 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaaattggaa 38955851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 559 - 702
Target Start/End: Original strand, 23663636 - 23663779
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||| |||||||||    
T  23663636 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatttgatttcgtggcaatcactgccacacatgaaattccaattttgc 23663735  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaaccca 702  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  23663736 ccttaagaagaggacaaaatattgaagaaagaattggaaaccca 23663779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 510 - 717
Target Start/End: Original strand, 22915431 - 22915638
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcac 609  Q
    |||||| |||| |||||| |||||||||  ||   || || ||||||  ||||||||||| ||||| ||| || |||||| ||||||| |||||||||||    
T  22915431 aaaattggtccatgtaatcgctaatccttgcaaactagccttgcaatcattaatcatttacaatttcgtcttttgaccaatttaatcattgccacgtcac 22915530  T
Q  610 taatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtga 709  Q
    |||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |    
T  22915531 taatttgatgacgtggaaatcactgccacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaactcaggggtaa 22915630  T
Q  710 atttggaa 717  Q
    | ||||||    
T  22915631 aattggaa 22915638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 559 - 697
Target Start/End: Complemental strand, 36928813 - 36928675
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||||    
T  36928813 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatttgatgacgtggcaatcactatcacacgtgaaattccaattttgc 36928714  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaa 697  Q
    | |||||||||||||||||||||||||| ||||||||||    
T  36928713 ctttaagaagaggacaaaatattgaagagagaattggaa 36928675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 559 - 717
Target Start/End: Original strand, 31608604 - 31608762
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||| ||||||||||| ||| || ||| || |||||||||||||||||||||||||||||| ||| ||||||||  ||||  |||||||||||||||||    
T  31608604 ttaataatttaaaatttcgtcatttgacaaacttaatcactgccacgtcactaatttgatgatgtgccaatcactatcacatatgaaatttcaattttgc 31608703  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  31608704 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaaattggaa 31608762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 559 - 717
Target Start/End: Complemental strand, 35756919 - 35756761
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| |||||| |||||| |||| ||||||||||||||||||  ||||||||| |||||||| |||||| |||||||||||||||||    
T  35756919 ttaatcatttaaaatttcgtcctttgaccaacttaagcactgccacgtcactaatacgatgacgtgacaatcactaccacacatgaaatttcaattttgc 35756820  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    ||||||||||| |||||||||||||||||| |||||||||| ||||||| || ||||||    
T  35756819 ccttaagaagatgacaaaatattgaagaaataattggaaactcaggggtaaaattggaa 35756761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 559 - 717
Target Start/End: Original strand, 40318055 - 40318213
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||  ||| || |||||| |||||||||||||||||||||||| ||||||||||||||||||  ||||| ||||||| |||| ||||    
T  40318055 ttaatcatttaaaattgcgtcatttgaccaacttaatcactgccacgtcactaattcgatgacgtggcaatcactatcacacatgaaattccaatcttgc 40318154  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| || ||||||    
T  40318155 ccttaagaagaggacaaaatattgaataaagaattggaaacccaggggtaaaattggaa 40318213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 559 - 707
Target Start/End: Original strand, 4405753 - 4405901
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||| |||| |||||| ||| || |||||| |||||||||| |||||||||||||||||||| || ||||||||||||||| ||||||| |||||||||    
T  4405753 ttaattattttaaatttcgtcatttgaccaacttaatcactgtcacgtcactaatttgatgacatgacaatcactgccacacatgaaattccaattttgc 4405852  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggt 707  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  4405853 ccttaagaagaggacaaaatattgaagaaagaattggaaactcaggggt 4405901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 468 - 605
Target Start/End: Complemental strand, 38845697 - 38845559
Alignment:
Q  468 aggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcat 566  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  38845697 aggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcat 38845598  T
Q  567 ttaaaatttggtccttggaccaaattaatcactgccacg 605  Q
    ||||||||| |||| |   || | |||||||||||||||    
T  38845597 ttaaaatttcgtccctctccccacttaatcactgccacg 38845559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 469 - 605
Target Start/End: Complemental strand, 40776047 - 40775910
Alignment:
Q  469 ggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatt 567  Q
    |||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40776047 ggcttattgatgtgtttaacccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatt 40775948  T
Q  568 taaaatttggtccttggaccaaattaatcactgccacg 605  Q
    |||||||| |||| |   || | |||||||||||||||    
T  40775947 taaaatttcgtccctctccccacttaatcactgccacg 40775910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 559 - 717
Target Start/End: Original strand, 4994748 - 4994906
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||| ||||||||||| ||| || |||||| ||||||||| ||||||| |||||| ||||||||| |||| ||| |||||| ||||||| |||||||||    
T  4994748 ttaattatttaaaatttcgtcttttgaccaacttaatcactaccacgtcgctaattcgatgacgtgacaatgactaccacacatgaaattccaattttgc 4994847  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||| || ||||||    
T  4994848 ccttaagaagaggacaaaatattgaagaaagaattgaaaacccagcggtaaaattggaa 4994906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 467 - 605
Target Start/End: Original strand, 2266490 - 2266629
Alignment:
Q  467 aaggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatca 565  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||||||||     
T  2266490 aaggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtctctgtaattgctaatcctggcattttaaccctgcaattgttaatcg 2266589  T
Q  566 tttaaaatttggtccttggaccaaattaatcactgccacg 605  Q
    |||||||||| |||| |   || | |||||||||||||||    
T  2266590 tttaaaatttcgtccctctccccacttaatcactgccacg 2266629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 468 - 605
Target Start/End: Complemental strand, 3041854 - 3041716
Alignment:
Q  468 aggcttattgatgtgtttagcctttgcaattaggcggcatttaaaat-tcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcat 566  Q
    |||||||||||||||||||||  |||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  3041854 aggcttattgatgtgtttagctcttgcaattaggcggcatttaaaaactcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcat 3041755  T
Q  567 ttaaaatttggtccttggaccaaattaatcactgccacg 605  Q
    ||||||||| |||| |   || | |||||||||||||||    
T  3041754 ttaaaatttcgtccctctccccacttaatcactgccacg 3041716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 469 - 605
Target Start/End: Complemental strand, 44407254 - 44407117
Alignment:
Q  469 ggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatt 567  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  44407254 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcatccctgtaattgctaatcctagcattttaaccctgcaattgttaatcatt 44407155  T
Q  568 taaaatttggtccttggaccaaattaatcactgccacg 605  Q
    |||||||| |||| |   || | |||||||||||||||    
T  44407154 taaaatttcgtccctctccccacttaatcactgccacg 44407117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 468 - 580
Target Start/End: Complemental strand, 35450007 - 35449894
Alignment:
Q  468 aggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcat 566  Q
    |||||||||||||| |||| || ||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  35450007 aggcttattgatgtatttatcccttgcaattaggcggcatttaaaaattcgtccatgtaattgctaatcctggcattttaaccctgcaattgttaatcat 35449908  T
Q  567 ttaaaatttggtcc 580  Q
    ||||||||| ||||    
T  35449907 ttaaaatttcgtcc 35449894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 468 - 599
Target Start/End: Original strand, 23505051 - 23505183
Alignment:
Q  468 aggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcat 566  Q
    ||||||| ||||||| |||| | ||||||||||||| ||||||||| ||||||| |||||||||||||| || || |||| || ||||||||||||||||    
T  23505051 aggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccatgtaattgctaatcttggcaatttacccttgcaattgttaatcat 23505150  T
Q  567 ttaaaatttggtccttggaccaaattaatcact 599  Q
    |||||||||||||||||||||||||||||||||    
T  23505151 ttaaaatttggtccttggaccaaattaatcact 23505183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 468 - 599
Target Start/End: Complemental strand, 23507854 - 23507722
Alignment:
Q  468 aggcttattgatgtgtttagcctttgcaattaggcggcatttaaaatt-cgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcat 566  Q
    ||||||| ||||||| |||| | ||||||||||||| ||||||||| | ||||||||||||||||||||||  || |||| || ||||||||||||||||    
T  23507854 aggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaatacgtccctgtaattgctaatccttgcaatttacccttgcaattgttaatcat 23507755  T
Q  567 ttaaaatttggtccttggaccaaattaatcact 599  Q
    |||||||||||||||||||||||||||||||||    
T  23507754 ttaaaatttggtccttggaccaaattaatcact 23507722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 559 - 699
Target Start/End: Complemental strand, 34685595 - 34685455
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| ||| || |||||| |||||||||| ||||||||||||||||||||||| ||||||||| ||||  |||||||  |||||| |    
T  34685595 ttaatcatttaaaatttcgtcatttgaccaacttaatcactgtcacgtcactaatttgatgacgtgacaatcactgtcacatatgaaattctaatttttc 34685496  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaac 699  Q
    | ||||||||||||||||||||| |||||| |||| |||||    
T  34685495 ctttaagaagaggacaaaatattaaagaaaaaattagaaac 34685455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 627 - 717
Target Start/End: Original strand, 23698434 - 23698524
Alignment:
Q  627 aatcactgccacacgtgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  23698434 aatcactgccacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaaattggaa 23698524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 491 - 661
Target Start/End: Complemental strand, 16388932 - 16388761
Alignment:
Q  491 ttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaa 589  Q
    ||||||||||| | ||||||||| || || | ||||||||||||||||| || |||| || |||| |  ||||||||||||||||| |||| |   || |    
T  16388932 ttgcaattaggggtcatttaaaaattggttcatgtaattgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctcccca 16388833  T
Q  590 attaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgccct 661  Q
     |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||| ||||    
T  16388832 cttaatcactgccacgtcactaatttgatgacgtggcaatcactgtcacacatgaaattccaattttaccct 16388761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 627 - 707
Target Start/End: Original strand, 8316778 - 8316858
Alignment:
Q  627 aatcactgccacacgtgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggt 707  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  8316778 aatcactgccacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacacaggggt 8316858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 627 - 703
Target Start/End: Original strand, 12273043 - 12273119
Alignment:
Q  627 aatcactgccacacgtgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccag 703  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12273043 aatcactgccacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccag 12273119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 591 - 707
Target Start/End: Original strand, 31873017 - 31873134
Alignment:
Q  591 ttaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgccc-ttaagaagaggacaaaatattgaagaaag 689  Q
    |||||||| | ||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||| ||| |||||||||||| | || || ||||||||    
T  31873017 ttaatcaccgtcacgtcactaatttgatgatgtggcaatcactgccacacatgaaattccaatttttccctttaagaagaggaaataagatggaagaaag 31873116  T
Q  690 aattggaaacccaggggt 707  Q
    ||||||||||||| ||||    
T  31873117 aattggaaacccatgggt 31873134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 522 - 662
Target Start/End: Original strand, 36928530 - 36928670
Alignment:
Q  522 tgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgac 621  Q
    |||||| ||||||||||||| |||| || |||| |  ||||||||||||||||| |||| |   || | |||||||||||||||||||||||||||||||    
T  36928530 tgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaatttgatgac 36928629  T
Q  622 gtggcaatcactgccacacgtgaaatttcaattttgccctt 662  Q
    ||| ||||||||| || || ||||||||||||||| |||||    
T  36928630 gtgacaatcactgtcatacatgaaatttcaattttaccctt 36928670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 467 - 608
Target Start/End: Complemental strand, 15230359 - 15230217
Alignment:
Q  467 aaggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatca 565  Q
    |||||||| |||||||||| | | ||||||||||| | ||||||||| || ||||||||||| ||||||| ||||| |||| || |||| |  |||||||    
T  15230359 aaggcttaatgatgtgttttgtccttgcaattaggtgtcatttaaaaattagtccctgtaatcgctaatcttgacaatttacccttgcattgtttaatca 15230260  T
Q  566 tttaaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    |||||||||| |||||| |||||| ||||||||||||||||||    
T  15230259 tttaaaatttcgtcctttgaccaacttaatcactgccacgtca 15230217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 627 - 717
Target Start/End: Complemental strand, 39071945 - 39071855
Alignment:
Q  627 aatcactgccacacgtgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    |||||||||||||  | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||    
T  39071945 aatcactgccacatataaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaactcaggggtaaaattggaa 39071855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 627 - 700
Target Start/End: Complemental strand, 38862866 - 38862793
Alignment:
Q  627 aatcactgccacacgtgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacc 700  Q
    |||||||||||||| ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  38862866 aatcactgccacacatgaaattccaattttgctcttaagaagaggacaaaatattgaagaaagaattggaaacc 38862793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 627 - 705
Target Start/End: Original strand, 16388686 - 16388764
Alignment:
Q  627 aatcactgccacacgtgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggg 705  Q
    ||||||| |||||| ||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  16388686 aatcactaccacacatgaaattccaattttgcacttaagaagaggacacaatattgaagaaagaattggaaacccaggg 16388764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 510 - 656
Target Start/End: Original strand, 39071718 - 39071864
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcac 609  Q
    |||||| ||||||||||| ||||||||||||| |||| || |||| |  ||||||||||||||||| |||| |   || | |||||||||||| ||||||    
T  39071718 aaaattggtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccgcgtcac 39071817  T
Q  610 taatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    |||||||| |||||||||||||||  ||||  ||||||| |||||||    
T  39071818 taatttgacgacgtggcaatcactatcacaaatgaaattccaatttt 39071864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 468 - 580
Target Start/End: Original strand, 11674694 - 11674807
Alignment:
Q  468 aggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcat 566  Q
    ||||||| ||||||| |||| | ||||||||||||| | ||||||| |||||||||||||||| |||||||| || |||| || ||||||||||||||||    
T  11674694 aggcttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattcgtccctgtaattgttaatcctggcaatttagccttgcaattgttaatcat 11674793  T
Q  567 ttaaaatttggtcc 580  Q
    ||||||||| ||||    
T  11674794 ttaaaatttcgtcc 11674807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 522 - 655
Target Start/End: Original strand, 13186114 - 13186247
Alignment:
Q  522 tgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgac 621  Q
    |||||| ||||||||||||| |||| || |||| |  ||||||||||||||||| |||  |   || | ||||||||||||||||||||||||| |||||    
T  13186114 tgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtctctctccccacttaatcactgccacgtcactaatttaatgac 13186213  T
Q  622 gtggcaatcactgccacacgtgaaatttcaattt 655  Q
    ||||||||||||| ||||| ||||||| ||||||    
T  13186214 gtggcaatcactgtcacacatgaaattccaattt 13186247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 468 - 608
Target Start/End: Complemental strand, 35634526 - 35634385
Alignment:
Q  468 aggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcat 566  Q
    ||||||| |||||||||| | | ||||||||| ||| ||||||||| || ||||||||||| ||||||||||||| |||| || |||| |  ||||||||    
T  35634526 aggcttaatgatgtgtttcgtccttgcaattaagcgtcatttaaaaattagtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcat 35634427  T
Q  567 ttaaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    ||||||||| ||||||  ||||| |||||||||| |||||||    
T  35634426 ttaaaatttcgtcctttaaccaacttaatcactgtcacgtca 35634385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 469 - 608
Target Start/End: Original strand, 44664508 - 44664648
Alignment:
Q  469 ggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatt 567  Q
    |||||| | |||||||| | | ||||||||||||| ||||||||| || ||||||||||| | |||||||| || ||||||| |||| |  |||||||||    
T  44664508 ggcttaattatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctggcaatttaaccttgcattgtttaatcatt 44664607  T
Q  568 taaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    |||||||| ||| || |||||| ||||||||||||||||||    
T  44664608 taaaatttcgtcatttgaccaacttaatcactgccacgtca 44664648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 627 - 717
Target Start/End: Original strand, 36186226 - 36186316
Alignment:
Q  627 aatcactgccacacgtgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    |||||||| | ||| |||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||||||| || || ||||||    
T  36186226 aatcactgtcccacatgaaatatcaattttgcacttaagaagaggacaaaatattgaagaaagaactggaaacccaggagtaaaattggaa 36186316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 510 - 656
Target Start/End: Complemental strand, 40318350 - 40318204
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcac 609  Q
    |||||| |||| |||||| |||||||||| || |||| || |||| |  ||||||||||||||||| ||||||   |  | ||||||||||||| |||||    
T  40318350 aaaattagtccatgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccttctcctcacttaatcactgccatgtcac 40318251  T
Q  610 taatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    ||||||||||||||||||||||| | || || ||||||| |||||||    
T  40318250 taatttgatgacgtggcaatcacagtcatacatgaaattccaatttt 40318204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 476 - 608
Target Start/End: Complemental strand, 10445754 - 10445621
Alignment:
Q  476 tgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatt 574  Q
    |||||||||| | | ||||||||||| | ||||||||| || ||||||||||| |||||||||| || |||| || |||| |  ||||||||||||||||    
T  10445754 tgatgtgtttcgtccttgcaattaggtgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatt 10445655  T
Q  575 tggtccttggaccaaattaatcactgccacgtca 608  Q
    | ||| || |||||| ||||||||||||||||||    
T  10445654 tcgtcttttgaccaacttaatcactgccacgtca 10445621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 560 - 656
Target Start/End: Complemental strand, 31608849 - 31608753
Alignment:
Q  560 taatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    |||||||||||||||| |||| |   || | ||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||| |||||||    
T  31608849 taatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaatttgatggcgtggcaatcactgtcacacatgaaattccaatttt 31608753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 467 - 605
Target Start/End: Original strand, 36325232 - 36325371
Alignment:
Q  467 aaggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatca 565  Q
    |||||||| ||||||| |||| | || |||||||| | | ||||||| |||||||||||||||| |||||||| || |||| || |||||||||||||||    
T  36325232 aaggcttaatgatgtgattagtccttacaattaggggtcgtttaaaaattcgtccctgtaattgttaatcctggcaatttagccttgcaattgttaatca 36325331  T
Q  566 tttaaaatttggtccttggaccaaattaatcactgccacg 605  Q
    |||||||||| |||| |   || | |||||||||||||||    
T  36325332 tttaaaatttcgtccctctccccacttaatcactgccacg 36325371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 467 - 608
Target Start/End: Original strand, 37542222 - 37542364
Alignment:
Q  467 aaggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatca 565  Q
    |||| ||| |||||||||| | ||||||||||||||| ||||||||| || |||||| |||| |||||||||| || |||| || |||| |  |||||||    
T  37542222 aaggtttaatgatgtgtttcgtctttgcaattaggcgtcatttaaaaattagtccctttaatcgctaatcctggcaatttacccttgcattgtttaatca 37542321  T
Q  566 tttaaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    |||||||||| || ||| |||||| |||||||| |||| ||||    
T  37542322 tttaaaatttcgttctttgaccaacttaatcaccgccaagtca 37542364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 491 - 656
Target Start/End: Complemental strand, 4995062 - 4994897
Alignment:
Q  491 ttgcaattaggcggcatttaaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaa 590  Q
    ||||||||||| | ||||||||| | |  |||||||| ||||||||||||| |||| || |||| |  |||||||||| |||||| |||| |   || |     
T  4995062 ttgcaattaggggtcatttaaaaattggtcctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttcaaatttcgtccctctccccac 4994963  T
Q  591 ttaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    ||||||  || || ||||||||||||||||||||||||||||| ||| || ||||||| |||||||    
T  4994962 ttaatccatgtcatgtcactaatttgatgacgtggcaatcactaccatacatgaaattccaatttt 4994897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 468 - 599
Target Start/End: Complemental strand, 234167 - 234035
Alignment:
Q  468 aggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcat 566  Q
    ||||||| |||||||||| | | ||||||||||||  ||||||||| || ||||||||||||| |||||||| || |||| || |||| |  ||||||||    
T  234167 aggcttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccctgtaattgttaatcctggcaatttacccttgcattgtttaatcat 234068  T
Q  567 ttaaaatttggtccttggaccaaattaatcact 599  Q
    ||||||||| |||||| || ||| |||||||||    
T  234067 ttaaaatttcgtcctttgatcaacttaatcact 234035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 468 - 599
Target Start/End: Complemental strand, 710578 - 710446
Alignment:
Q  468 aggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcat 566  Q
    ||||||| |||||||||| | | ||||||||||||  ||||||||| || ||||||||||||| |||||||| || |||| || |||| |  ||||||||    
T  710578 aggcttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccctgtaattgttaatcctggcaatttacccttgcattgtttaatcat 710479  T
Q  567 ttaaaatttggtccttggaccaaattaatcact 599  Q
    ||||||||| |||||| || ||| |||||||||    
T  710478 ttaaaatttcgtcctttgatcaacttaatcact 710446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 468 - 599
Target Start/End: Complemental strand, 747790 - 747658
Alignment:
Q  468 aggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcat 566  Q
    ||||||| |||||||||| | | ||||||||||||  ||||||||| || ||||||||||||| |||||||| || |||| || |||| |  ||||||||    
T  747790 aggcttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccctgtaattgttaatcctggcaatttacccttgcattgtttaatcat 747691  T
Q  567 ttaaaatttggtccttggaccaaattaatcact 599  Q
    ||||||||| |||||| || ||| |||||||||    
T  747690 ttaaaatttcgtcctttgatcaacttaatcact 747658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 468 - 599
Target Start/End: Complemental strand, 871685 - 871553
Alignment:
Q  468 aggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcat 566  Q
    ||||||| |||||||||| | | ||||||||||||  ||||||||| || ||||||||||||| |||||||| || |||| || |||| |  ||||||||    
T  871685 aggcttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccctgtaattgttaatcctggcaatttacccttgcattgtttaatcat 871586  T
Q  567 ttaaaatttggtccttggaccaaattaatcact 599  Q
    ||||||||| |||||| || ||| |||||||||    
T  871585 ttaaaatttcgtcctttgatcaacttaatcact 871553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 469 - 599
Target Start/End: Original strand, 15229931 - 15230062
Alignment:
Q  469 ggcttattgatgtgtttagcctttgcaattaggcggcattt-aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatt 567  Q
    |||||| |||||||||| | | ||||||||||||| ||||| |||||| ||||||||||| |||||||||| || |||| || || | |  |||||||||    
T  15229931 ggcttaatgatgtgttttgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttggattgtttaatcatt 15230030  T
Q  568 taaaatttggtccttggaccaaattaatcact 599  Q
    |||||||| |||||| || ||| |||||||||    
T  15230031 taaaatttcgtcctttgatcaacttaatcact 15230062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 530 - 656
Target Start/End: Original strand, 35756644 - 35756770
Alignment:
Q  530 ctaatcctgacattttaaccctgcaattgtt-aatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaa 628  Q
    |||||||||||| |||| || || ||||||| ||||||||||||||| |||| |   || | ||||||||||||| ||||||||||||||||||||||||    
T  35756644 ctaatcctgacaatttatccttg-aattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccatgtcactaatttgatgacgtggcaa 35756742  T
Q  629 tcactgccacacgtgaaatttcaatttt 656  Q
    |||||| || |  ||||||| |||||||    
T  35756743 tcactgtcatatatgaaattccaatttt 35756770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 471 - 608
Target Start/End: Complemental strand, 8998113 - 8997975
Alignment:
Q  471 cttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcattta 569  Q
    |||| |||||||||| | | ||||||||||||| ||||||||| || || | |||||| ||||||| ||||| |||| || |||| |  |||||||||||    
T  8998113 cttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagttcatgtaatcgctaatcatgacaatttacccttgcattgtttaatcattta 8998014  T
Q  570 aaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    |||||  |||||| |||||| |||||||||| |||||||    
T  8998013 aaattccgtcctttgaccaacttaatcactgtcacgtca 8997975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 491 - 608
Target Start/End: Original strand, 25124585 - 25124703
Alignment:
Q  491 ttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaa 589  Q
    ||||||||||||| ||||||||| || |||| |||||| |||||||||| || |||| || |||| |  ||||||||||||||||| |||||| ||||||    
T  25124585 ttgcaattaggcgtcatttaaaaattagtccatgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaa 25124684  T
Q  590 attaatcactgccacgtca 608  Q
     |||| |||||||| ||||    
T  25124685 cttaaccactgccaagtca 25124703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 467 - 608
Target Start/End: Complemental strand, 41354001 - 41353859
Alignment:
Q  467 aaggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatca 565  Q
    |||||||| |||||||||| | | ||  ||||||||| ||||||||| || |||||||||||  |||||||||||| |||| ||  ||| |  |||||||    
T  41354001 aaggcttaatgatgtgtttcgtccttataattaggcgtcatttaaaaattagtccctgtaatcactaatcctgacaatttaccctagcattatttaatca 41353902  T
Q  566 tttaaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    |||||||||| |||||| |||||| |||||||| | |||||||    
T  41353901 tttaaaatttcgtcctttgaccaacttaatcaccgtcacgtca 41353859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 491 - 608
Target Start/End: Complemental strand, 42945518 - 42945400
Alignment:
Q  491 ttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaa 589  Q
    ||||||||||||| ||||||||| || || |||||||| ||||||||||||| ||||  | |||| |  ||||||||||||||||| ||| || ||||||    
T  42945518 ttgcaattaggcgtcatttaaaaattagttcctgtaatcgctaatcctgacaatttactcttgcattgtttaatcatttaaaatttcgtcatttgaccaa 42945419  T
Q  590 attaatcactgccacgtca 608  Q
     ||||||||||||| ||||    
T  42945418 cttaatcactgccaagtca 42945400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 471 - 608
Target Start/End: Complemental strand, 44664932 - 44664794
Alignment:
Q  471 cttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcattta 569  Q
    |||| |||||||||| | | ||||||||||||| ||||||||| || ||| ||||||| ||||||||||||| |||| || |||| |  |||||||||||    
T  44664932 cttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctctgtaatcgctaatcctgacaatttacccttgcattgtttaatcattta 44664833  T
Q  570 aaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    |||||| ||  || |||||| ||||||| ||||| ||||    
T  44664832 aaatttcgttatttgaccaacttaatcattgccaagtca 44664794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 510 - 639
Target Start/End: Complemental strand, 4406046 - 4405917
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcac 609  Q
    |||||| |||| |||| ||| |||||||  || |||| || ||||||  ||||||||||||||||| |||| |   || | |||||||||| ||||||||    
T  4406046 aaaattggtccatgtatttgttaatccttgcaatttacccttgcaatgtttaatcatttaaaatttcgtccctcttcccacttaatcactgtcacgtcac 4405947  T
Q  610 taatttgatgacgtggcaatcactgccaca 639  Q
    |||||||| |||||||||||||||| ||||    
T  4405946 taatttgaagacgtggcaatcactgtcaca 4405917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 512 - 608
Target Start/End: Original strand, 42945158 - 42945254
Alignment:
Q  512 aattcgtccctgtaattgctaatcctgacattttaaccctgcaattgtt-aatcatttaaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    |||| ||||||||||||||||||||||||| |||| ||||   |||||| ||||||||||||||| |||||| |||||| ||||||||||||| ||||    
T  42945158 aattagtccctgtaattgctaatcctgacaattta-cccttatattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccaagtca 42945254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 468 - 599
Target Start/End: Original strand, 7983427 - 7983559
Alignment:
Q  468 aggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcat 566  Q
    ||||||| | |||||||| | | ||||||||||||| ||||||||| || ||||||||||| |||||||||| || |||| || |||| |  ||||||||    
T  7983427 aggcttaattatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcat 7983526  T
Q  567 ttaaaatttggtccttggaccaaattaatcact 599  Q
    ||||||||| |||||| ||  || |||||||||    
T  7983527 ttaaaatttcgtcctttgaaaaacttaatcact 7983559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 524 - 656
Target Start/End: Complemental strand, 36186439 - 36186307
Alignment:
Q  524 taattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgt 623  Q
    |||| ||||||||||||| |||| |  |||| |  ||||||||||||||||| |||| |   || | |||||||||||||| | ||||||||||||||||    
T  36186439 taatcgctaatcctgacaatttacctttgcattgtttaatcatttaaaatttcgtccctctccctacttaatcactgccacattactaatttgatgacgt 36186340  T
Q  624 ggcaatcactgccacacgtgaaatttcaatttt 656  Q
    | |||||| || ||||| ||||||| |||||||    
T  36186339 gacaatcagtgtcacacatgaaattccaatttt 36186307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 469 - 608
Target Start/End: Complemental strand, 25124989 - 25124849
Alignment:
Q  469 ggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatt 567  Q
    |||||| | |||||||| | | ||||||||||| | ||||||||| || ||| ||||||| |||||| ||| || |||| || |||| |  |||||||||    
T  25124989 ggcttaatcatgtgtttcgtccttgcaattaggtgtcatttaaaaattagtctctgtaatcgctaattctggcaatttacccttgcattgtttaatcatt 25124890  T
Q  568 taaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    ||||||||  ||||| || ||| ||||||||||||||||||    
T  25124889 taaaatttcatcctttgaacaacttaatcactgccacgtca 25124849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 510 - 604
Target Start/End: Original strand, 12272960 - 12273054
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccac 604  Q
    |||||| ||| ||||||| |||||||||  ||   || || ||||||| ||||||||||||||||| |||||| |||||| ||||||||||||||    
T  12272960 aaaattggtctctgtaatcgctaatccttgcaaactagccttgcaattattaatcatttaaaatttcgtcctttgaccaatttaatcactgccac 12273054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 591 - 656
Target Start/End: Complemental strand, 31873204 - 31873141
Alignment:
Q  591 ttaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    ||||||||||| || |||||||||||||||||||||||||| |||||||  ||||||| |||||||    
T  31873204 ttaatcactgctacatcactaatttgatgacgtggcaatcattgccaca--tgaaattccaatttt 31873141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 476 - 608
Target Start/End: Original strand, 6471697 - 6471830
Alignment:
Q  476 tgatgtgtttagcctttgcaattaggcggcatttaaaattc-gtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatt 574  Q
    |||||||||| | | ||||||||||||| ||||||||| |  ||| || |||| |||||||||| || |||| || |||| |  ||||||||||||||||    
T  6471697 tgatgtgtttcgtccttgcaattaggcgtcatttaaaaatgagtctctataatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatt 6471796  T
Q  575 tggtccttggaccaaattaatcactgccacgtca 608  Q
    | ||| ||  | ||| ||||||||||||||||||    
T  6471797 tcgtctttttatcaacttaatcactgccacgtca 6471830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 559 - 627
Target Start/End: Complemental strand, 8747601 - 8747533
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggca 627  Q
    ||||||||||||||||| |||| |  ||| | |||||||| ||||||||| ||||||||||||||||||    
T  8747601 ttaatcatttaaaatttcgtcccttaacccacttaatcaccgccacgtcagtaatttgatgacgtggca 8747533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 522 - 599
Target Start/End: Complemental strand, 6472062 - 6471985
Alignment:
Q  522 tgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcact 599  Q
    |||||| || |||||||||| |||| || |||| |  ||||||||||||||||| |||||| |||||| |||||||||    
T  6472062 tgtaatcgccaatcctgacaatttacccttgcattgtttaatcatttaaaattttgtcctttgaccaacttaatcact 6471985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 559 - 604
Target Start/End: Original strand, 8316744 - 8316789
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccac 604  Q
    ||||||||||||||||| |||||| |||||| ||||||||||||||    
T  8316744 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccac 8316789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 559 - 608
Target Start/End: Complemental strand, 34061665 - 34061616
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    ||||||||||||||||| |||||| |||||| ||||||||||||| ||||    
T  34061665 ttaatcatttaaaatttcgtcctttgaccaagttaatcactgccatgtca 34061616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 559 - 604
Target Start/End: Complemental strand, 38862900 - 38862855
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccac 604  Q
    ||||||||||||||||| |||||| |||||| ||||||||||||||    
T  38862900 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccac 38862855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 559 - 604
Target Start/End: Complemental strand, 39071979 - 39071934
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccac 604  Q
    ||||||||||||||||| |||||| |||||| ||||||||||||||    
T  39071979 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccac 39071934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 559 - 627
Target Start/End: Original strand, 9337117 - 9337185
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggca 627  Q
    |||||||||||| | ||||||| |  ||| | |||||||||||||||||||||||||| | ||||||||    
T  9337117 ttaatcatttaagaattggtccctcaacctagttaatcactgccacgtcactaatttgcttacgtggca 9337185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 559 - 626
Target Start/End: Complemental strand, 7295264 - 7295197
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggc 626  Q
    |||||| ||||||||||  ||||| |||| | | ||| |||||||||||| |||||||||||||||||    
T  7295264 ttaatcgtttaaaatttcatcctttgacccagtcaatgactgccacgtcattaatttgatgacgtggc 7295197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 476 - 546
Target Start/End: Original strand, 8997863 - 8997934
Alignment:
Q  476 tgatgtgtttagcctttgcaattaggcggcattt-aaaattcgtccctgtaattgctaatcctgacatttta 546  Q
    |||||||||| | | ||||||||||||| ||||| |||||| ||||||| ||| ||||||||||||| ||||    
T  8997863 tgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgcaatcgctaatcctgacaattta 8997934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 494 - 608
Target Start/End: Complemental strand, 37542626 - 37542511
Alignment:
Q  494 caattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaatt 592  Q
    |||||||||| ||||||||| || || ||||| || | |||| |||| | |||| || |||| |  ||||||||||||||||| |||||| |||||| ||    
T  37542626 caattaggcgtcatttaaaaattggttcctgttatcgttaattctgataatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaactt 37542527  T
Q  593 aatcactgccacgtca 608  Q
    ||||||| | ||||||    
T  37542526 aatcactccaacgtca 37542511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 510 - 604
Target Start/End: Original strand, 23698351 - 23698445
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccac 604  Q
    |||||| ||||||||||| |||||| ||  ||   || || ||||||  ||||||| ||||||||| |||||| |||||| ||||||||||||||    
T  23698351 aaaattagtccctgtaatcgctaattcttgcaaactagccttgcaatcattaatcagttaaaatttcgtcctttgaccaatttaatcactgccac 23698445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 510 - 580
Target Start/End: Complemental strand, 23698630 - 23698560
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtcc 580  Q
    |||||| ||||||||||| |||||||||| || |||| || |||| |  ||||||||||||||||| ||||    
T  23698630 aaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcc 23698560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #83
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 494 - 599
Target Start/End: Original strand, 41353599 - 41353705
Alignment:
Q  494 caattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaatt 592  Q
    |||||||||| ||||||||| || ||  ||||||| ||||||||| ||| |||| || |||| |  ||||||||||||||||| ||| || || ||| ||    
T  41353599 caattaggcgtcatttaaaaattagtttctgtaatcgctaatcctaacaatttacccttgcattgtttaatcatttaaaatttcgtcatttgagcaactt 41353698  T
Q  593 aatcact 599  Q
    |||||||    
T  41353699 aatcact 41353705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 211; Significance: 1e-115; HSPs: 77)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 472 - 717
Target Start/End: Complemental strand, 54466817 - 54466571
Alignment:
Q  472 ttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaa 570  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||| |||||    
T  54466817 ttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattggtaatcctggcattttaaccctgcaattgttaatcgtttaa 54466718  T
Q  571 aatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaagaagag 670  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  54466717 aatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgtcacacatgaaatttcaattttgcccttaagaagag 54466618  T
Q  671 gacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||    
T  54466617 gacaaaatattgaagaaagaattggaaacccaggggtaaatttggaa 54466571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 472 - 717
Target Start/End: Complemental strand, 8042010 - 8041764
Alignment:
Q  472 ttattgatgtgtttagcctttgcaattaggcggcatttaaa-attcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaa 570  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  8042010 ttattgatgtgtttagcccttgcaattaggcggcatttaaatattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtttaa 8041911  T
Q  571 aatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaagaagag 670  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||    
T  8041910 aatttggtccttggaacaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgtcacacatgaaattacaattttgcccttaagaagag 8041811  T
Q  671 gacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||    
T  8041810 gacaaaatattgaagaaagaattggaaacccaggggtaaatttggaa 8041764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 468 - 717
Target Start/End: Original strand, 36314297 - 36314547
Alignment:
Q  468 aggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcat 566  Q
    ||||||| ||||||| |||| | ||||||||||||| ||||||||| ||||||||||||||||||||||||| || |||| || ||||||||||||||||    
T  36314297 aggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcat 36314396  T
Q  567 ttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaaga 666  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  36314397 ttaaaatttggtccttggaccaacttaatcactgccacgtcactaatttgatgacgtggcaatcactgtcacacatgaaatttcaattttgcccttaaga 36314496  T
Q  667 agaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  36314497 agaggacaaaatattgaagaaagaattggaaactcaggggtaaatttggaa 36314547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 175; E-Value: 8e-94
Query Start/End: Original strand, 468 - 717
Target Start/End: Original strand, 48322376 - 48322626
Alignment:
Q  468 aggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcat 566  Q
    ||||||| ||||||| |||| | |||||||||| |  ||||||||| ||||||||||||||||||||||||| || |||| || ||||||||||||||||    
T  48322376 aggcttaatgatgtgattagtccttgcaattagacatcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcat 48322475  T
Q  567 ttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaaga 666  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||    
T  48322476 ttaaaatttggtccttggaccaacttaatcactgccacgtcactaatttgatgacgtggcaatcactgtcacacatgaaattccaattttgcccttaaga 48322575  T
Q  667 agaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  48322576 agaggacaaaatattgaagaaagaattagaaacccaggggtaaatttggaa 48322626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 476 - 706
Target Start/End: Original strand, 10770497 - 10770728
Alignment:
Q  476 tgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatt 574  Q
    ||||||| |||| | ||||||||||||| ||||||||| ||||||||||||||||||||||||| || |||| || ||||||||||||||||||||||||    
T  10770497 tgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaaaatt 10770596  T
Q  575 tggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaagaagaggaca 674  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| | ||||| ||||||| |||||||||||||||||||||||||    
T  10770597 tggtccttggaccaacttaatcactgccacatcactaatttgatgacgtggcaatcaccgtcacacatgaaattccaattttgcccttaagaagaggaca 10770696  T
Q  675 aaatattgaagaaagaattggaaacccagggg 706  Q
    ||||||||||||||||||||||||||||||||    
T  10770697 aaatattgaagaaagaattggaaacccagggg 10770728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 510 - 716
Target Start/End: Original strand, 19740965 - 19741171
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcac 609  Q
    |||||| ||||||||||| |||||||||  ||   || || ||||||  ||||||||||||||||| |||||| |||||| ||||||| |||||||||||    
T  19740965 aaaattggtccctgtaatcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgaccaatttaatcattgccacgtcac 19741064  T
Q  610 taatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtga 709  Q
    ||||||||||||||||||||||||| ||||| ||||||| ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| |    
T  19741065 taatttgatgacgtggcaatcactggcacacatgaaattccaattttacctttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaa 19741164  T
Q  710 atttgga 716  Q
    | |||||    
T  19741165 aattgga 19741171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 563 - 717
Target Start/End: Complemental strand, 43384616 - 43384462
Alignment:
Q  563 tcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgccctt 662  Q
    ||||||||||||| |||||| |||||| |||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||| |||||||||||||    
T  43384616 tcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaattcgatgacgtggcaatcactaccacacatgaaattccaattttgccctt 43384517  T
Q  663 aagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  43384516 aagaagaggacaaaatattgaagaaagaattggaaacccagggttgaaattggaa 43384462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 559 - 707
Target Start/End: Complemental strand, 36418025 - 36417877
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| |||||| ||| || |||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||| |||||||||    
T  36418025 ttaatcatttaaaatttcgtcctttgacaaacttaatcactgccacgtcactaattcgatgacgtggcaatcactaccacacatgaaattccaattttgc 36417926  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggt 707  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  36417925 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggt 36417877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 19 - 332
Target Start/End: Original strand, 5031439 - 5031776
Alignment:
Q  19 aacgggccctaagcacacggcacaaaaagggccgaagaacaaacttttttctcaagtgcagatctgacatatttttgtttttggtagatgta-------- 110  Q
    ||||||||||||||| |  ||||||||||||| |||||||||||||||| || | ||| || |||| | |||||||||||||||||||||||            
T  5031439 aacgggccctaagcatagtgcacaaaaagggctgaagaacaaacttttt-ctgaggtgtagctctggcgtatttttgtttttggtagatgtagcaagcaa 5031537  T
Q  111 ---attaaggttcatttgtagaaaatattgtttgagataattatggtaaaaatgattgtacaatagataattgatttcttcacaaagaatgtttgctgca 207  Q
       ||||||| |||||||||||||||||||||| |||  |||||||||||||| |||||||||| |||||||| ||||||||||||||||||| |||||     
T  5031538 gcaattaagggtcatttgtagaaaatattgtttcagaagattatggtaaaaatcattgtacaatcgataattgttttcttcacaaagaatgttagctgcc 5031637  T
Q  208 attgtttgagctattc--------accaa-------cttgaactatttgcacttcacttttatatcgcctattgtttgtgcaaattgcttcctttgtctc 292  Q
    |||||||||||| |||        |||||        |||||||| ||||| ||||| |||||||||||| ||||||||||| |||||||||||||||||    
T  5031638 attgtttgagctgttcacatttgtaccaatttgaattttgaactacttgcatttcacctttatatcgcct-ttgtttgtgcacattgcttcctttgtctc 5031736  T
Q  293 gagtttcatcactgtgagtatatttggaaggtagatttca 332  Q
    |||||||||||||||| || ||||| | ||||||||||||    
T  5031737 gagtttcatcactgtgggtgtattttgcaggtagatttca 5031776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 559 - 717
Target Start/End: Complemental strand, 46475118 - 46474960
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| |||||| |||||| |||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||| |||||||||    
T  46475118 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaattcgatgacgtggcaatcactaccacacatgaaattccaattttgc 46475019  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||| || ||||||    
T  46475018 ccttaagaagaggacaaaatattgaagaaataattggaaactcaggggtaaaattggaa 46474960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 559 - 717
Target Start/End: Original strand, 55052370 - 55052528
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||    
T  55052370 ttaatcatttaaaatttagtcctttgaccaacttaatcactgccacgtcactaatttgatgacgtggcaatcactgtcaaacatgaaatttcaattttgc 55052469  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    ||||||||||||||||||||||| |||||||||||| |||| ||||||| || ||||||    
T  55052470 ccttaagaagaggacaaaatattaaagaaagaattgaaaactcaggggtaaaattggaa 55052528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 510 - 717
Target Start/End: Original strand, 23458021 - 23458228
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcac 609  Q
    |||||| ||||||||| | |||||||||  ||   || || ||||||  ||||||||||||||||| |||||| |||||| |||||||||||||||||||    
T  23458021 aaaattggtccctgtattcgctaatccttgcaaactagccttgcaataattaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcac 23458120  T
Q  610 taatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtga 709  Q
    ||||||||||||||||||||||||  ||||| ||||||| ||||||| | |||||||||||||||||||||||||||||||||| ||||| ||||||| |    
T  23458121 taatttgatgacgtggcaatcactatcacacatgaaattccaatttttctcttaagaagaggacaaaatattgaagaaagaattagaaactcaggggtaa 23458220  T
Q  710 atttggaa 717  Q
    | ||||||    
T  23458221 aattggaa 23458228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 469 - 604
Target Start/End: Original strand, 47921466 - 47921602
Alignment:
Q  469 ggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatt 567  Q
    |||||||||||||||||| || ||||||||||||||||||||||| |||||||||||||||| ||||| || ||||||||||||||||||||||||| ||    
T  47921466 ggcttattgatgtgtttaacccttgcaattaggcggcatttaaaaattcgtccctgtaattgttaatcttggcattttaaccctgcaattgttaatcgtt 47921565  T
Q  568 taaaatttggtccttggaccaaattaatcactgccac 604  Q
    |||||||||||||||||||||||||||||||||||||    
T  47921566 taaaatttggtccttggaccaaattaatcactgccac 47921602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 468 - 605
Target Start/End: Original strand, 8041615 - 8041753
Alignment:
Q  468 aggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcat 566  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  8041615 aggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcat 8041714  T
Q  567 ttaaaatttggtccttggaccaaattaatcactgccacg 605  Q
    ||||||||| |||| |   || | |||||||||||||||    
T  8041715 ttaaaatttcgtccctctccccacttaatcactgccacg 8041753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 559 - 717
Target Start/End: Original strand, 33689472 - 33689628
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| |||||| |||||| |||||||||||||||||||||||| ||||||||| ||||||||  ||||| ||||||| ||||||||     
T  33689472 ttaatcatttaaaattttgtcctttgaccaacttaatcactgccacgtcactaattcgatgacgtgacaatcactatcacacatgaaattccaattttg- 33689570  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||||| || ||||||    
T  33689571 ccttaagaagaggacaaaatattgaa-aaagaattggaaactcaggggtaaaattggaa 33689628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 559 - 717
Target Start/End: Original strand, 9294049 - 9294207
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| ||| || |||||| |||||||||||||||||||||||  |  || |||||||||||| |||||| |||||||  ||||||||    
T  9294049 ttaatcatttaaaattttgtcttttgaccaacttaatcactgccacgtcactaatacggggaggtggcaatcactaccacacatgaaattctaattttgc 9294148  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    | ||||||||| ||||||||||||||||||||||||||||| ||||||| || ||||||    
T  9294149 cgttaagaagatgacaaaatattgaagaaagaattggaaactcaggggtaaaattggaa 9294207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 472 - 605
Target Start/End: Original strand, 54466426 - 54466560
Alignment:
Q  472 ttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaa 570  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  54466426 ttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgttaatcctggcattttaaccctgcaattgttaatcatttaa 54466525  T
Q  571 aatttggtccttggaccaaattaatcactgccacg 605  Q
    ||||| |||| |   || | |||||||||||||||    
T  54466526 aatttcgtccctctccccacttaatcactgccacg 54466560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 545 - 697
Target Start/End: Complemental strand, 53757074 - 53756923
Alignment:
Q  545 taaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtga 644  Q
    ||||| ||||||  ||||||||||||||||| ||||||  ||||| ||||||||| || ||||||||||| ||||||||| |||||||| |||||| |||    
T  53757074 taaccttgcaatcattaatcatttaaaatttcgtcctttaaccaacttaatcactaccgcgtcactaattcgatgacgtgacaatcactaccacacatga 53756975  T
Q  645 aatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaa 697  Q
    |||| ||||||| |||| |||||||||||||||||||||||||||||||||||    
T  53756974 aattccaatttt-ccctgaagaagaggacaaaatattgaagaaagaattggaa 53756923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 615 - 717
Target Start/End: Original strand, 40033637 - 40033739
Alignment:
Q  615 tgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttg 714  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| || |||    
T  40033637 tgatgacgtggcaatcactgccacacatgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattgaaaacccatgggtaaaattg 40033736  T
Q  715 gaa 717  Q
    |||    
T  40033737 gaa 40033739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 627 - 717
Target Start/End: Complemental strand, 2796417 - 2796327
Alignment:
Q  627 aatcactgccacacgtgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    |||||||||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  2796417 aatcactgccacacatgaaattccaattttgccctttagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaaattggaa 2796327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 627 - 707
Target Start/End: Complemental strand, 40758413 - 40758333
Alignment:
Q  627 aatcactgccacacgtgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggt 707  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  40758413 aatcactgccacacgtgaaattccaactttgcccttaagaagaggacaaaatattgaagaaagaataggaaacccaggggt 40758333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 467 - 608
Target Start/End: Complemental strand, 37778701 - 37778559
Alignment:
Q  467 aaggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatca 565  Q
    |||||||| |||||||||| | | ||||||||||||| ||||||||| || |||||||||||||||||||||| || |||| || |||| |  |||||||    
T  37778701 aaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaattgctaatcctggcaatttacccttgcattgtttaatca 37778602  T
Q  566 tttaaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    ||||||||||  ||||| |||||| ||||||||||||||||||    
T  37778601 tttaaaatttcatcctttgaccaacttaatcactgccacgtca 37778559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 627 - 717
Target Start/End: Complemental strand, 42343034 - 42342944
Alignment:
Q  627 aatcactgccacacgtgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    ||||| |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||||||    
T  42343034 aatcagtgccacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaatccaggggtaaaattggaa 42342944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 627 - 717
Target Start/End: Original strand, 51994076 - 51994166
Alignment:
Q  627 aatcactgccacacgtgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    ||||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||    
T  51994076 aatcactgccaaacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaaccccggggtaaaattggaa 51994166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 627 - 707
Target Start/End: Original strand, 26463757 - 26463837
Alignment:
Q  627 aatcactgccacacgtgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggt 707  Q
    ||||||||||| || ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  26463757 aatcactgccatacatgaaattccaattttgcccttaagaagaggacaaaattttgaagaaagaattggaaacccaggggt 26463837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 467 - 608
Target Start/End: Original strand, 3469198 - 3469340
Alignment:
Q  467 aaggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatca 565  Q
    |||||||| |||||||||| | ||||||||||||||| ||||||||| || |||| ||||||  ||||||||| || |||| || |||| |  |||||||    
T  3469198 aaggcttaatgatgtgtttcgtctttgcaattaggcgtcatttaaaaattagtccatgtaatcactaatcctggcaatttacccttgcattgtttaatca 3469297  T
Q  566 tttaaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    |||||||||| |||||| |||||| |||||||| |||||||||    
T  3469298 tttaaaatttcgtcctttgaccaacttaatcacggccacgtca 3469340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 510 - 656
Target Start/End: Complemental strand, 9294344 - 9294198
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcac 609  Q
    |||||| |||||| |||| |||||||||| || |||| || |||| |  ||||||||||||||||| |||| |   || | |||||||||| || |||||    
T  9294344 aaaattggtccctataatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgtcatgtcac 9294245  T
Q  610 taatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    |||||||||||||||||||||||||||| || ||||||| |||||||    
T  9294244 taatttgatgacgtggcaatcactgccatacatgaaattccaatttt 9294198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 467 - 608
Target Start/End: Complemental strand, 40788848 - 40788706
Alignment:
Q  467 aaggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatca 565  Q
    |||||||| |||||||||| | | ||||||||||||| ||||||||| || ||||||||||| |||||||||| || ||||  | |||| |  ||||||     
T  40788848 aaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttactcttgcattgtttaatct 40788749  T
Q  566 tttaaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    |||||||||| |||||| |||||| ||||||||||||||||||    
T  40788748 tttaaaatttcgtcctttgaccaacttaatcactgccacgtca 40788706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 468 - 605
Target Start/End: Complemental strand, 48322775 - 48322637
Alignment:
Q  468 aggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcat 566  Q
    ||||||| ||||||| |||| | ||||||||||||| | ||||||| |||||||||||||||| |||||||| || |||| || ||||||||||||||||    
T  48322775 aggcttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattcgtccctgtaattgttaatcctggcaatttagccttgcaattgttaatcat 48322676  T
Q  567 ttaaaatttggtccttggaccaaattaatcactgccacg 605  Q
    ||||||||| |||| |   || | |||||||||||||||    
T  48322675 ttaaaatttcgtccctctccccacttaatcactgccacg 48322637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 469 - 605
Target Start/End: Complemental strand, 36314695 - 36314558
Alignment:
Q  469 ggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatt 567  Q
    |||||| ||||||| |||| | ||||||||||||| | ||||||| |||||||||||||||| |||||||| || |||| || |||||||||||||||||    
T  36314695 ggcttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattcgtccctgtaattgttaatcctggcaatttagccttgcaattgttaatcatt 36314596  T
Q  568 taaaatttggtccttggaccaaattaatcactgccacg 605  Q
    |||||||| |||| |   || | |||||||||||||||    
T  36314595 taaaatttcgtccctctccccacttaatcactgccacg 36314558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 489 - 656
Target Start/End: Complemental strand, 33689787 - 33689619
Alignment:
Q  489 ctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggacc 587  Q
    ||||||||||||| | | ||||||| || || | |||||| |||||||||| || |||| || |||| |  ||||||||||||||||| |||| |   ||    
T  33689787 ctttgcaattaggggtcgtttaaaaattggttcatgtaatcgctaatcctggcaatttacccttgcattatttaatcatttaaaatttcgtccctctccc 33689688  T
Q  588 aaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
     | |||||||||||||||||||||||| ||||||||||||||||||| || || ||||||| |||||||    
T  33689687 cacttaatcactgccacgtcactaattcgatgacgtggcaatcactgtcatacatgaaattccaatttt 33689619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 466 - 608
Target Start/End: Complemental strand, 29118967 - 29118824
Alignment:
Q  466 gaaggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatc 564  Q
    |||||| || |||||||||| | | ||||||||||||| ||||||||| || ||| ||||||| |||||||||| || |||| |  |||| |  ||||||    
T  29118967 gaaggcataatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtcactgtaatcgctaatcctggcaatttaccattgcattgtttaatc 29118868  T
Q  565 atttaaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    ||||||||||| |||||| |||||| ||||||||||||||||||    
T  29118867 atttaaaatttcgtcctttgaccaacttaatcactgccacgtca 29118824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 476 - 605
Target Start/End: Complemental strand, 10770881 - 10770751
Alignment:
Q  476 tgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatt 574  Q
    ||||||| |||| | || |||||||||| ||||||||| |||||||||||||||| |||||||| || |||| || ||||||||||||||||||||||||    
T  10770881 tgatgtgattagtccttacaattaggcgtcatttaaaaattcgtccctgtaattgttaatcctggcaatttagccttgcaattgttaatcatttaaaatt 10770782  T
Q  575 tggtccttggaccaaattaatcactgccacg 605  Q
    | |||| |   || | |||||||||||||||    
T  10770781 tcgtccctctccccacttaatcactgccacg 10770751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 510 - 656
Target Start/End: Complemental strand, 23458365 - 23458219
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcac 609  Q
    |||||| ||| ||||||| |||||||||  || |||| || |||| |  ||||||||||||||||| |||| |   || | |||||||||||||| ||||    
T  23458365 aaaattggtctctgtaatcgctaatccttgcaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacatcac 23458266  T
Q  610 taatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    ||||||||||||||| ||||||||| ||||| ||||||| |||||||    
T  23458265 taatttgatgacgtgccaatcactgtcacacatgaaattccaatttt 23458219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 491 - 608
Target Start/End: Original strand, 29685963 - 29686081
Alignment:
Q  491 ttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaa 589  Q
    ||||||||||||| ||||||||| || ||||||||||| ||||||||||||| |||| || |||| |  ||||||||||||||||| || ||| ||||||    
T  29685963 ttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctgacaatttatccttgcattgtttaatcatttaaaatttcgttctttgaccaa 29686062  T
Q  590 attaatcactgccacgtca 608  Q
     || |||||||||||||||    
T  29686063 cttgatcactgccacgtca 29686081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 467 - 608
Target Start/End: Original strand, 32306422 - 32306564
Alignment:
Q  467 aaggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatca 565  Q
    |||||||| |||||||||| | | ||||||||||||| ||||||||| || || | |||||| ||||||| ||||| |||| || |||| |  |||||||    
T  32306422 aaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagttcatgtaatcgctaatcttgacaatttacccttgcattgtttaatca 32306521  T
Q  566 tttaaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    |||||||||| |||||| |||||| ||||||||| ||||||||    
T  32306522 tttaaaatttcgtcctttgaccaacttaatcactaccacgtca 32306564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 491 - 608
Target Start/End: Original strand, 35643873 - 35643991
Alignment:
Q  491 ttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaa 589  Q
    ||||||||||||| ||||||||| || ||||||||||| |||||||||| || |||| || |||| |  ||||||||||||||||| |||||| ||| ||    
T  35643873 ttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccgtgcattgtttaatcatttaaaatttcgtcctttgacaaa 35643972  T
Q  590 attaatcactgccacgtca 608  Q
     ||||||||||||||||||    
T  35643973 cttaatcactgccacgtca 35643991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 559 - 656
Target Start/End: Original strand, 40758235 - 40758332
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    ||||||||||||||||| |||| |   || | ||||||||| |||||||||||||||||||||||||||||||| | ||||| |||||||||||||||    
T  40758235 ttaatcatttaaaatttcgtccctctccccacttaatcactaccacgtcactaatttgatgacgtggcaatcaccgtcacacatgaaatttcaatttt 40758332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 510 - 655
Target Start/End: Original strand, 43384325 - 43384470
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcac 609  Q
    |||||| ||||||||||| ||||||||||||| |||| || |||| |  ||||||||||||||||| |||  |   || | |||||||||| || |||||    
T  43384325 aaaattggtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtctctctccccacttaatcactgtcatgtcac 43384424  T
Q  610 taatttgatgacgtggcaatcactgccacacgtgaaatttcaattt 655  Q
    |||||||||||||||||||||||| ||| || | ||||| ||||||    
T  43384425 taatttgatgacgtggcaatcactaccatacataaaattccaattt 43384470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 469 - 598
Target Start/End: Original strand, 10294567 - 10294697
Alignment:
Q  469 ggcttattgatgtgtttagcctttgcaattaggcggcattt-aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatt 567  Q
    |||||| |||||||||| | | ||||||||||||| ||||| |||||| ||||||||||||||||||| ||||| |||| || || | |  |||||||||    
T  10294567 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaattgctaatcatgacaatttacccttgtattgtttaatcatt 10294666  T
Q  568 taaaatttggtccttggaccaaattaatcac 598  Q
    |||||||| ||||||  ||||| ||||||||    
T  10294667 taaaatttcgtcctttaaccaacttaatcac 10294697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 467 - 604
Target Start/End: Original strand, 47551491 - 47551629
Alignment:
Q  467 aaggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatca 565  Q
    |||||||| |||||||||| | | ||||||||||  | ||||||||| || ||||||||||| |||||| ||| || |||| || |||| |  |||||||    
T  47551491 aaggcttaatgatgtgtttcgtccttgcaattagatgtcatttaaaaattagtccctgtaatcgctaatactggcaatttacccttgcattgtttaatca 47551590  T
Q  566 tttaaaatttggtccttggaccaaattaatcactgccac 604  Q
    ||||||||||  ||||| |||||| ||||||||||||||    
T  47551591 tttaaaatttcatcctttgaccaacttaatcactgccac 47551629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 468 - 608
Target Start/End: Complemental strand, 3469627 - 3469486
Alignment:
Q  468 aggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcat 566  Q
    ||||||| |||| ||||| | | ||||||||||||| ||||||||| || || |||||||| |||||||||| || |||| || |||| |  ||||||||    
T  3469627 aggcttaatgatctgtttcgtccttgcaattaggcgtcatttaaaaattagttcctgtaatcgctaatcctggcaatttacccttgcattgtttaatcat 3469528  T
Q  567 ttaaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    ||||||||  |||||| |||||| ||||||||| ||| ||||    
T  3469527 ttaaaattccgtcctttgaccaacttaatcactaccaagtca 3469486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 468 - 600
Target Start/End: Original strand, 13948779 - 13948912
Alignment:
Q  468 aggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcat 566  Q
    ||||||| |||||||||| | | ||||||||||||  ||||||||| || |||| |||||| ||||||| || || |||| || |||| |  ||||||||    
T  13948779 aggcttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccatgtaatcgctaatcttggcaatttacccttgcattgtttaatcat 13948878  T
Q  567 ttaaaatttggtccttggaccaaattaatcactg 600  Q
    ||||||||| |||||| |||||| ||||||||||    
T  13948879 ttaaaatttcgtcctttgaccaacttaatcactg 13948912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 559 - 648
Target Start/End: Complemental strand, 26463935 - 26463846
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatt 648  Q
    ||||||||||||||||| |||| |   || | |||||||||| |||||||||||||||||||| |||||||||||| ||||| |||||||    
T  26463935 ttaatcatttaaaatttcgtccctctccccacttaatcactgtcacgtcactaatttgatgacatggcaatcactgtcacacatgaaatt 26463846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 476 - 608
Target Start/End: Original strand, 52032145 - 52032278
Alignment:
Q  476 tgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatt 574  Q
    |||||||||| | | ||||||||||||| ||||||||| ||  ||| |||||| |||||||||  || |||| || |||| |  ||||||||||||||||    
T  52032145 tgatgtgttttgtccttgcaattaggcgtcatttaaaaattaatccttgtaatcgctaatcctagcaatttacccttgcattgtttaatcatttaaaatt 52032244  T
Q  575 tggtccttggaccaaattaatcactgccacgtca 608  Q
    | |||||| |||||| ||||||||| ||||||||    
T  52032245 tcgtcctttgaccaacttaatcactaccacgtca 52032278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 551 - 627
Target Start/End: Original strand, 9367824 - 9367900
Alignment:
Q  551 tgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggca 627  Q
    ||||||| ||||||||||||||||| |||| |   || |||||||||||||||||||||||||||||||| ||||||    
T  9367824 tgcaattattaatcatttaaaatttcgtccctcatcccaattaatcactgccacgtcactaatttgatgaggtggca 9367900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 471 - 606
Target Start/End: Original strand, 11910701 - 11910837
Alignment:
Q  471 cttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcattta 569  Q
    |||| |||||||||| | | |||||||||| || ||||||||| ||  |||||||||| |||||||||  || |||| || |||| |  |||||||||||    
T  11910701 cttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaattaatccctgtaatcgctaatcctagcaatttacccttgcattgtttaatcattta 11910800  T
Q  570 aaatttggtccttggaccaaattaatcactgccacgt 606  Q
    |||||| |||||| |||||| ||||||||| ||||||    
T  11910801 aaatttcgtcctttgaccaacttaatcactaccacgt 11910837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 492 - 627
Target Start/End: Complemental strand, 25108500 - 25108364
Alignment:
Q  492 tgcaattaggcggcatttaaaattcg-tccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaa 590  Q
    |||||||||| | ||||||||||| | ||||||||||||||||||||| ||   |  ||||||||  |||||||||||||||||| ||||||   |  |     
T  25108500 tgcaattaggggtcatttaaaatttggtccctgtaattgctaatcctggcaaactgtccctgcaaacgttaatcatttaaaatttcgtccttcatcacag 25108401  T
Q  591 ttaatcactgccacgtcactaatttgatgacgtggca 627  Q
    |||||||||||||||||||| ||| | ||||||||||    
T  25108400 ttaatcactgccacgtcactgattagctgacgtggca 25108364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 510 - 654
Target Start/End: Original strand, 36417730 - 36417874
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcac 609  Q
    |||||| ||||||||| | |||||||||  ||   || || ||||||  ||||||||||||||||| |||||| ||| || |||||||| | || |||||    
T  36417730 aaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgacaaacttaatcaccgtcatgtcac 36417829  T
Q  610 taatttgatgacgtggcaatcactgccacacgtgaaatttcaatt 654  Q
    ||||||||||| ||||||||||||  || || ||||||| |||||    
T  36417830 taatttgatgatgtggcaatcactatcatacatgaaattccaatt 36417874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 467 - 598
Target Start/End: Complemental strand, 52032567 - 52032435
Alignment:
Q  467 aaggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatca 565  Q
    |||||||| |||||||||| | | |||||||||| || ||||||||| || ||||||||||| |||||||||| || | || || |||| |  |||||||    
T  52032567 aaggcttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaattagtccctgtaatcgctaatcctggcaatatacccttgcattgtttaatca 52032468  T
Q  566 tttaaaatttggtccttggaccaaattaatcac 598  Q
    ||||||||||  ||||| |||||| ||||||||    
T  52032467 tttaaaatttcttcctttgaccaacttaatcac 52032435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 388 - 462
Target Start/End: Original strand, 5031792 - 5031865
Alignment:
Q  388 tttataagatgtgaaagaacagattttttgggtgaaatggcaaagtggtatggagaatgttgcttagaatgtttg 462  Q
    ||||||||||| |||||||| |||||||| ||||||||||  |||| |||||||||||||| |||||||||||||    
T  5031792 tttataagatgagaaagaacggatttttttggtgaaatggggaagt-gtatggagaatgttccttagaatgtttg 5031865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 476 - 608
Target Start/End: Complemental strand, 32306843 - 32306710
Alignment:
Q  476 tgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatt 574  Q
    |||||||||| | | ||||||||||||| ||||||||| || |||  |||||| |||||||||| || |||| || |||| |  ||||||||||||||||    
T  32306843 tgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtcaatgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatt 32306744  T
Q  575 tggtccttggaccaaattaatcactgccacgtca 608  Q
    | ||| || |||||| ||||||||| ||| ||||    
T  32306743 tcgtcatttgaccaacttaatcactaccaagtca 32306710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 467 - 608
Target Start/End: Original strand, 3596107 - 3596249
Alignment:
Q  467 aaggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatca 565  Q
    |||| ||| |||||||||| | | |||||||||||||  |||||||| || |||  |||||| ||||||||||||| |||| |  |||| |  |||||||    
T  3596107 aaggtttaatgatgtgtttcgtccttgcaattaggcgtgatttaaaaattagtcaatgtaatcgctaatcctgacaatttacctttgcattatttaatca 3596206  T
Q  566 tttaaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    |||||||||| || ||| |||||| ||||||||| ||| ||||    
T  3596207 tttaaaatttcgttctttgaccaacttaatcactaccatgtca 3596249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 510 - 608
Target Start/End: Complemental strand, 10307759 - 10307661
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    |||||| ||| ||||||| |||||||||| || |||| || |||| |  ||||||||||||||||| |||||| |||||| |||||||||  |||||||    
T  10307759 aaaattagtctctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactcgcacgtca 10307661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 471 - 608
Target Start/End: Complemental strand, 29686364 - 29686226
Alignment:
Q  471 cttattgatgtgtttagcctttgcaattaggcggcattt-aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcattta 569  Q
    |||| |||||||||| | | ||||||||||||| ||||| |||||| |||  ||||||  ||||||||| || |||| || |||| |  |||||||||||    
T  29686364 cttaatgatgtgtttcgtccttgcaattaggcgtcattttaaaattagtcattgtaatcactaatcctggcaatttacccttgcattgtttaatcattta 29686265  T
Q  570 aaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    |||||| ||| || |||||| ||||||||| ||| ||||    
T  29686264 aaattttgtcatttgaccaacttaatcactaccaagtca 29686226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 492 - 608
Target Start/End: Complemental strand, 4323607 - 4323490
Alignment:
Q  492 tgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaa 590  Q
    |||||||||||| | ||||||| |||||||||||||| |||||||||| ||  |||||| |||| |  |||||||||||||| || |||  || ||| |     
T  4323607 tgcaattaggcgtcgtttaaaaattcgtccctgtaatcgctaatcctggcaaattaaccttgcattgtttaatcatttaaaaattcgtcactgaacccac 4323508  T
Q  591 ttaatcactgccacgtca 608  Q
    ||||| ||||||||||||    
T  4323507 ttaatgactgccacgtca 4323490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 476 - 608
Target Start/End: Original strand, 41421979 - 41422112
Alignment:
Q  476 tgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatt 574  Q
    |||||||||| | | ||||||||||||| || |||||| || || |||||||| | ||||| ||||| |||| || | || |  ||||||||||||||||    
T  41421979 tgatgtgtttcgtccttgcaattaggcgtcagttaaaaattagttcctgtaatcgttaatcttgacaatttacccttacattgtttaatcatttaaaatt 41422078  T
Q  575 tggtccttggaccaaattaatcactgccacgtca 608  Q
    | ||| || |||||| |||||||||| |||||||    
T  41422079 tcgtcatttgaccaacttaatcactgtcacgtca 41422112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 591 - 656
Target Start/End: Original strand, 41988085 - 41988149
Alignment:
Q  591 ttaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    |||||||||||||| ||||||||||||| |||||||||||||||  |||| ||||||| |||||||    
T  41988085 ttaatcactgccacatcactaatttgat-acgtggcaatcactgttacacatgaaattccaatttt 41988149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 476 - 627
Target Start/End: Complemental strand, 33156415 - 33156263
Alignment:
Q  476 tgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatt 574  Q
    |||||||||| | | ||||||||||||| ||||||||| || |||  |||||| | ||||| || || |||| || | || |  ||||||||||||||||    
T  33156415 tgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtcattgtaatcgttaatcttggcaatttaccctttcattgtttaatcatttaaaatt 33156316  T
Q  575 tggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggca 627  Q
    | |||| |   || | |||||||||||||||||||||||| | ||||||||||    
T  33156315 tcgtccctccccccacttaatcactgccacgtcactaattagctgacgtggca 33156263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 491 - 605
Target Start/End: Original strand, 2796201 - 2796316
Alignment:
Q  491 ttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaa 589  Q
    ||||||||||| | ||||||||| || ||||||||||| |||||||||| || |||| || |||| |  ||||||||||||||||| |||| |   || |    
T  2796201 ttgcaattaggggtcatttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctcccca 2796300  T
Q  590 attaatcactgccacg 605  Q
     |||||||||||||||    
T  2796301 cttaatcactgccacg 2796316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 467 - 608
Target Start/End: Complemental strand, 10294987 - 10294845
Alignment:
Q  467 aaggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatca 565  Q
    |||||||| |||||||||| | | ||||||| || ||  |||||||| || || |||||||| |||||||||  || |||| || |||| |  |||||||    
T  10294987 aaggcttaatgatgtgtttcgtccttgcaatcagacgtaatttaaaaattagttcctgtaatcgctaatcctcgcaatttacccttgcattgtttaatca 10294888  T
Q  566 tttaaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    |||||||||| ||  || |||||| ||||||||||||| ||||    
T  10294887 tttaaaatttcgttttttgaccaacttaatcactgccaagtca 10294845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 468 - 572
Target Start/End: Original strand, 4322591 - 4322695
Alignment:
Q  468 aggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcat 566  Q
    ||||||| ||||||||||  ||  |||||||||||| | ||||||| ||||||| |||||| |||||||||||||  |||||| |||| |  ||||||||    
T  4322591 aggcttaatgatgtgtttcacccctgcaattaggcgtcgtttaaaaattcgtcc-tgtaatcgctaatcctgacaaattaaccttgcattgtttaatcat 4322689  T
Q  567 ttaaaa 572  Q
    ||||||    
T  4322690 ttaaaa 4322695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 559 - 604
Target Start/End: Complemental strand, 40758447 - 40758402
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccac 604  Q
    ||||||||||||||||| |||||| |||||| ||||||||||||||    
T  40758447 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccac 40758402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 469 - 537
Target Start/End: Complemental strand, 42855733 - 42855664
Alignment:
Q  469 ggcttattgatgtgtttagcctttgcaattaggcggcattt-aaaattcgtccctgtaattgctaatcct 537  Q
    |||||| |||||||||||||| ||||||||||||| ||||| |||||| |||| |||| | |||||||||    
T  42855733 ggcttaatgatgtgtttagcccttgcaattaggcgtcatttaaaaattagtccatgtattcgctaatcct 42855664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 559 - 603
Target Start/End: Original strand, 26463723 - 26463767
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgcca 603  Q
    ||||||||||||||||| |||||| |||||| |||||||||||||    
T  26463723 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgcca 26463767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 559 - 603
Target Start/End: Original strand, 51994042 - 51994086
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgcca 603  Q
    ||||||||||||||||| |||||| |||||| |||||||||||||    
T  51994042 ttaatcatttaaaatttagtcctttgaccaacttaatcactgcca 51994086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 510 - 609
Target Start/End: Complemental strand, 51994272 - 51994173
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcac 609  Q
    |||||| |||| |||||| |||||| ||| || |||| ||||||| |  ||||||||||||||||| |||| |   || | |||||||||||||||||||    
T  51994272 aaaattggtccttgtaatcgctaattctggcaatttacccctgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcac 51994173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 559 - 654
Target Start/End: Original strand, 53756835 - 53756930
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaatt 654  Q
    ||||||||||||||||| |||| |   || | ||||||| || || |||||||||||||||| ||||||||||||  || || ||||||| |||||    
T  53756835 ttaatcatttaaaatttcgtccatcttcccatttaatcattgtcatgtcactaatttgatgatgtggcaatcactatcatacatgaaattccaatt 53756930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 591 - 625
Target Start/End: Original strand, 23272946 - 23272980
Alignment:
Q  591 ttaatcactgccacgtcactaatttgatgacgtgg 625  Q
    |||||||||||||||||||| ||||||||||||||    
T  23272946 ttaatcactgccacgtcactgatttgatgacgtgg 23272980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 492 - 625
Target Start/End: Original strand, 25107236 - 25107370
Alignment:
Q  492 tgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaa 590  Q
    |||||||||| | ||||||||| || ||| || |||| |||||||||| ||  ||  |||||||| ||||||||||||||||||| |||| |   |  |     
T  25107236 tgcaattaggggtcatttaaaaattggtctctctaatcgctaatcctggcaaattgcccctgcaaatgttaatcatttaaaatttcgtccctcatcacag 25107335  T
Q  591 ttaatcactgccacgtcactaatttgatgacgtgg 625  Q
    |||||||||||||||||| | ||| | ||||||||    
T  25107336 ttaatcactgccacgtcagtgattagctgacgtgg 25107370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 559 - 629
Target Start/End: Complemental strand, 54317968 - 54317899
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaat 629  Q
    ||||||||||||||||| |||  |   || ||||||||||||||||||||||||| |||||| ||||||||    
T  54317968 ttaatcatttaaaatttcgtctctctccctaattaatcactgccacgtcactaatctgatga-gtggcaat 54317899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 559 - 604
Target Start/End: Complemental strand, 2796451 - 2796406
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccac 604  Q
    ||||||| ||||||||| |||||| |||||| ||||||||||||||    
T  2796451 ttaatcagttaaaatttcgtcctttgaccaacttaatcactgccac 2796406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 492 - 580
Target Start/End: Complemental strand, 23276388 - 23276299
Alignment:
Q  492 tgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtcc 580  Q
    |||||||||| | ||||||||| || ||||||||||| |||||||| | ||  ||| |||| |||  |||||||||||||||||| ||||    
T  23276388 tgcaattaggggtcatttaaaaattggtccctgtaatcgctaatcccggcaaattacccctacaaacgttaatcatttaaaattttgtcc 23276299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 559 - 600
Target Start/End: Original strand, 29118629 - 29118670
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactg 600  Q
    ||||||||||||||||| |||||| |||||| ||||||||||    
T  29118629 ttaatcatttaaaatttcgtcctttgaccaacttaatcactg 29118670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 559 - 620
Target Start/End: Original strand, 35712122 - 35712183
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatga 620  Q
    ||||||||||||||||| ||| || |||| | |||||||||| || ||||||||| ||||||    
T  35712122 ttaatcatttaaaatttcgtcttttgacccagttaatcactgtcaggtcactaatctgatga 35712183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 559 - 604
Target Start/End: Complemental strand, 42343068 - 42343023
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccac 604  Q
    ||||||||||||||||| |||||| |||||| ||||||| ||||||    
T  42343068 ttaatcatttaaaatttcgtcctttgaccaacttaatcagtgccac 42343023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 559 - 608
Target Start/End: Complemental strand, 47857582 - 47857533
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    ||||||||||||||||| ||| || |||||| ||||||| ||||||||||    
T  47857582 ttaatcatttaaaatttcgtcatttgaccaacttaatcaatgccacgtca 47857533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 208; Significance: 1e-113; HSPs: 80)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 467 - 717
Target Start/End: Original strand, 34928648 - 34928899
Alignment:
Q  467 aaggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatca 565  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||     
T  34928648 aaggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcg 34928747  T
Q  566 tttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaag 665  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||| ||||||||||||||||    
T  34928748 tttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcattgtcacacatgaaattccaattttgcccttaag 34928847  T
Q  666 aagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  34928848 aagaggacaaaatattgaagaaataattggaaacccaggggtaaatttggaa 34928899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 467 - 717
Target Start/End: Original strand, 39686532 - 39686783
Alignment:
Q  467 aaggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatca 565  Q
    ||||||||||||||| |||| || ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||     
T  39686532 aaggcttattgatgtatttaacccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcg 39686631  T
Q  566 tttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaag 665  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||| ||||||||||||||||    
T  39686632 tttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcaccgtcacacatgaaattccaattttgcccttaag 39686731  T
Q  666 aagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  39686732 aagaggacaaaatattgaagaaagaattggaaacccaggggtaaatttggaa 39686783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 472 - 717
Target Start/End: Original strand, 30948163 - 30948409
Alignment:
Q  472 ttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaa 570  Q
    ||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  30948163 ttattgatgtgtttaacccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtttaa 30948262  T
Q  571 aatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaagaagag 670  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||| |||||||||||||||||||||    
T  30948263 aatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgttacacatgaaattccaattttgcccttaagaagag 30948362  T
Q  671 gacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||    
T  30948363 gacaaaatattgaagaaagaattggaaacccaggggtaaatttggaa 30948409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 468 - 717
Target Start/End: Original strand, 32680594 - 32680844
Alignment:
Q  468 aggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcat 566  Q
    ||||||| ||||||| |||| | ||||||||||||| ||||||||| ||||| |||||||||||||||||||||| |||| || ||||||||||||||||    
T  32680594 aggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgttcctgtaattgctaatcctgacaatttagccttgcaattgttaatcat 32680693  T
Q  567 ttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaaga 666  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||    
T  32680694 ttaaaatttggtccttggaccaacttaatcactgccacgtcactaatttgatgacgtggcaatcactgtcacacatgaaattccaattttgcccttaaga 32680793  T
Q  667 agaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  32680794 agaggacaaaatattgaagaaagaattggaaacccaggggtaaatttggaa 32680844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 551 - 717
Target Start/End: Original strand, 22871391 - 22871557
Alignment:
Q  551 tgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttc 650  Q
    ||||||| ||||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |    
T  22871391 tgcaattattaatcatttaaaatttcgtcctttgaccaatttaatcactgccacgtcactaatttgatgacgtggcaatcactgcaacacatgaaattcc 22871490  T
Q  651 aattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || ||||||    
T  22871491 aattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaagggtaaaattggaa 22871557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 559 - 717
Target Start/End: Complemental strand, 17102326 - 17102168
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| |||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||| |||||||||    
T  17102326 ttaatcatttaaaatttagtcctttgaccaacttaatcactgccacgtcactaattttatgacgtggcaatcactgccaaacatgaaattccaattttgc 17102227  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  17102226 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaaattggaa 17102168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 510 - 717
Target Start/End: Complemental strand, 27992094 - 27991887
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcac 609  Q
    |||||| ||||||||| | |||||||||  ||   || || ||||||  ||||||||||||||||| |||||| |||||| |||||||||||||||||||    
T  27992094 aaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttagtcctttgaccaacttaatcactgccacgtcac 27991995  T
Q  610 taatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtga 709  Q
    |||||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |    
T  27991994 taatttgatgacgtggcaatcactgccaaacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattgaaaactcaggggtaa 27991895  T
Q  710 atttggaa 717  Q
    | ||||||    
T  27991894 aattggaa 27991887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 559 - 717
Target Start/End: Original strand, 2640269 - 2640427
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| |||||| |||||| |||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||| |||||||||    
T  2640269 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaattcgatgacgtggcaatcactaccacacatgaaattccaattttgc 2640368  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||    
T  2640369 ccttaagaagaggacaaaatattgaagaaagaatcggaaacccaggggtaaaattggaa 2640427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 559 - 717
Target Start/End: Original strand, 28469101 - 28469257
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| |||||| |||||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28469101 ttaatcatttaaaatttcgtcctttgaccaacttaatcattgcc-cgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 28469199  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| || ||||||    
T  28469200 ccttaagaagaggacaaaatattgaagaaagaattgg-aacccaggggtaaaattggaa 28469257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 551 - 717
Target Start/End: Complemental strand, 42731764 - 42731598
Alignment:
Q  551 tgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttc 650  Q
    ||||||| ||||||||||||||||| |||||| |||||| ||||||||||||||||||||||||  ||||||||||||||||| |||||| ||||||| |    
T  42731764 tgcaattattaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaattcaatgacgtggcaatcactcccacacatgaaattcc 42731665  T
Q  651 aattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || ||||||    
T  42731664 aattttgcccttaagaagaggacaaaatattgaagaaaaaattggaaacccaggggtaaaattggaa 42731598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 559 - 705
Target Start/End: Complemental strand, 19204795 - 19204649
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||| |||||||||||  || || |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  19204795 ttaattatttaaaatttcatcatttgaccaatttaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacatgaaattccaattttgc 19204696  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggg 705  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  19204695 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggg 19204649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 559 - 705
Target Start/End: Original strand, 32053234 - 32053380
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    |||||||||||||||||  || || |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  32053234 ttaatcatttaaaatttcatcttttgaccaacttaatcactgccacatcactaatttgatgacgtggcaatcactgccacacttgaaattccaattttgc 32053333  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggg 705  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  32053334 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggg 32053380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 559 - 717
Target Start/End: Complemental strand, 37657187 - 37657029
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| |||||| |||||| |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  37657187 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgacacgtcgctaatttgatgacgtggcaatcactgccacacgtgaaattccaattttgc 37657088  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    ||||||||||| |||||||||||||||||| ||||||||| |||||||| || ||||||    
T  37657087 ccttaagaagaagacaaaatattgaagaaataattggaaagccaggggtaaaattggaa 37657029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 507 - 717
Target Start/End: Complemental strand, 3914527 - 3914317
Alignment:
Q  507 tttaaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgt 606  Q
    ||||||||| ||||||||| | |||||||||  ||   || || ||||||  |||||||||||||||||  || || |||||| ||||||||||||| ||    
T  3914527 tttaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcatcatttgaccaacttaatcactgccatgt 3914428  T
Q  607 cactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccagggg 706  Q
    |||||||| |||||| ||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3914427 cactaattcgatgacatggcaatcactaccacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccagggg 3914328  T
Q  707 tgaatttggaa 717  Q
    | || ||||||    
T  3914327 taaaattggaa 3914317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 559 - 717
Target Start/End: Original strand, 42019688 - 42019846
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| || ||| |||||||||||||||||| |||||||||||| ||||| |||||||||||| |||||| | ||||| |||||||||    
T  42019688 ttaatcatttaaaatttcgttctttgaccaaattaatcactgctacgtcactaattcgatgatgtggcaatcactaccacacattaaattccaattttgc 42019787  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  42019788 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaaattggaa 42019846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 559 - 717
Target Start/End: Complemental strand, 6253777 - 6253619
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| |||||| |||||| |||||||||| |||||||||||||||||||| || |||||||||||| || ||||||| |||||||||    
T  6253777 ttaatcatttaaaatttagtcctttgaccaacttaatcactgtcacgtcactaatttgatgacatgacaatcactgccaaacatgaaattccaattttgc 6253678  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||| || ||||||    
T  6253677 ccttaagtagaggacaaaatattgaagaaagaattggaaactcaggggtaaaattggaa 6253619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 510 - 717
Target Start/End: Original strand, 48788845 - 48789052
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcac 609  Q
    |||||| ||||||||| | |||||||||  ||   || || ||||||  |||||||||||||||||  || || |||||| ||||||| || ||||||||    
T  48788845 aaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcatcatttgaccaacttaatcagtgtcacgtcac 48788944  T
Q  610 taatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtga 709  Q
    ||||| |||||||||||||||||| |||||| ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |    
T  48788945 taattcgatgacgtggcaatcactaccacacatgaaattccaattttgcacttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaa 48789044  T
Q  710 atttggaa 717  Q
    | ||||||    
T  48789045 aattggaa 48789052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 467 - 605
Target Start/End: Complemental strand, 30948559 - 30948420
Alignment:
Q  467 aaggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatca 565  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  30948559 aaggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatca 30948460  T
Q  566 tttaaaatttggtccttggaccaaattaatcactgccacg 605  Q
    |||||||||| |||| |   || | |||||||||||||||    
T  30948459 tttaaaatttcgtccctctccccacttaatcactgccacg 30948420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 559 - 717
Target Start/End: Complemental strand, 10936131 - 10935973
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| |||||| |  ||| ||||||| |||| ||||||||||| ||||||||| |||||| | |||||| ||||||| |||||||||    
T  10936131 ttaatcatttaaaatttcgtcctttggacaacttaatcattgccgcgtcactaattagatgacgtgacaatcattaccacacatgaaattccaattttgc 10936032  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| || ||||||    
T  10936031 ccttaagaagaggacaaaatattgaagaaagaattggaaatccaggggtaaaattggaa 10935973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 468 - 605
Target Start/End: Complemental strand, 34929048 - 34928910
Alignment:
Q  468 aggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcat 566  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| |    
T  34929048 aggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgt 34928949  T
Q  567 ttaaaatttggtccttggaccaaattaatcactgccacg 605  Q
    ||||||||| |||| |   || | |||||||||||||||    
T  34928948 ttaaaatttcgtccctctccccacttaatcactgccacg 34928910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 468 - 605
Target Start/End: Complemental strand, 39686932 - 39686794
Alignment:
Q  468 aggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcat 566  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| |    
T  39686932 aggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgt 39686833  T
Q  567 ttaaaatttggtccttggaccaaattaatcactgccacg 605  Q
    ||||||||| |||| |   || | |||||||||||||||    
T  39686832 ttaaaatttcgtccctctccccacttaatcactgccacg 39686794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 598 - 717
Target Start/End: Complemental strand, 45010893 - 45010774
Alignment:
Q  598 ctgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaa 697  Q
    |||||||||||||||||||||||||| ||||||| |||||||| ||||||| |||||||||| |||||||||||||||||||||||||||||||||| ||    
T  45010893 ctgccacgtcactaatttgatgacgtagcaatcattgccacacatgaaattccaattttgcctttaagaagaggacaaaatattgaagaaagaattgaaa 45010794  T
Q  698 acccaggggtgaatttggaa 717  Q
     | ||||||| || ||||||    
T  45010793 gctcaggggtaaaattggaa 45010774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 627 - 717
Target Start/End: Complemental strand, 6571251 - 6571161
Alignment:
Q  627 aatcactgccacacgtgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  6571251 aatcactgccacacatgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaaattggaa 6571161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 627 - 717
Target Start/End: Complemental strand, 24389088 - 24388998
Alignment:
Q  627 aatcactgccacacgtgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    ||||||||||| || ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||||||    
T  24389088 aatcactgccatacatgaaattccaattttgcccttaagaagatgacaaaatattgaagaaagaattggaaacccaggggtaaaattggaa 24388998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 510 - 656
Target Start/End: Original strand, 10935836 - 10935982
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcac 609  Q
    |||||| ||||||||||| |||||||||| || |||| || |||| |  ||||||||||||||||| |||| |    | | ||||||||||||| |||||    
T  10935836 aaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctctccacttaatcactgccatgtcac 10935935  T
Q  610 taatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    |||||||||||||||||||||||||||| || ||||||| |||||||    
T  10935936 taatttgatgacgtggcaatcactgccatacatgaaattccaatttt 10935982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 510 - 656
Target Start/End: Complemental strand, 28469394 - 28469248
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcac 609  Q
    |||||| ||||||||||| | |||||||| || |||| || |||| |  ||||||||||||||||| |||| |   || | ||||||||| |||||||||    
T  28469394 aaaattggtccctgtaatcgttaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactaccacgtcac 28469295  T
Q  610 taatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    ||||||||||||||||||||||||| ||||| ||||||| |||||||    
T  28469294 taatttgatgacgtggcaatcactgtcacacatgaaattccaatttt 28469248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 510 - 656
Target Start/End: Original strand, 42731461 - 42731607
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcac 609  Q
    |||||| |||| |||||| |||||||||| || |||| ||||||| |  ||||||||||||||||| |||| |   || | ||||||||||||| |||||    
T  42731461 aaaattggtccttgtaatcgctaatcctggcaatttacccctgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccatgtcac 42731560  T
Q  610 taatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    ||||||||||||||| |||||||||||| || ||||||| |||||||    
T  42731561 taatttgatgacgtgacaatcactgccatacatgaaattccaatttt 42731607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 627 - 707
Target Start/End: Original strand, 32298895 - 32298975
Alignment:
Q  627 aatcactgccacacgtgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggt 707  Q
    |||||||||||||| ||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  32298895 aatcactgccacacatgaaattccatttttgcccttaagaagaggacaagatattgaagaaagaattggaaactcaggggt 32298975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 627 - 717
Target Start/End: Original strand, 27396754 - 27396844
Alignment:
Q  627 aatcactgccacacgtgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    |||||||||||||| | ||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||| |||||| || ||||||    
T  27396754 aatcactgccacacataaaattccaattctgcccttaagaagatgacaaaatattgaagaaagaattggaaacctaggggtaaaattggaa 27396844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 468 - 605
Target Start/End: Complemental strand, 32680993 - 32680855
Alignment:
Q  468 aggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcat 566  Q
    ||||||| ||||||| |||| | ||||||||||||| | ||||||| ||||||| ||||||||||||||||| || |||| || ||||||||||||||||    
T  32680993 aggcttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattcgtccatgtaattgctaatcctggcaatttagccttgcaattgttaatcat 32680894  T
Q  567 ttaaaatttggtccttggaccaaattaatcactgccacg 605  Q
    ||||||||| |||| |   || | |||||||||||||||    
T  32680893 ttaaaatttcgtccctctccccacttaatcactgccacg 32680855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 469 - 608
Target Start/End: Original strand, 25453128 - 25453268
Alignment:
Q  469 ggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatt 567  Q
    |||||| |||||||||| | | ||||||||||||| ||||||||| || |||||| |||| ||||||||||||| |||| || |||| |  |||||||||    
T  25453128 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctataatcgctaatcctgacaatttacccttgcattatttaatcatt 25453227  T
Q  568 taaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    |||||||| |||||| |||||| ||||||||| ||| ||||    
T  25453228 taaaatttcgtcctttgaccaacttaatcactaccaagtca 25453268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 510 - 656
Target Start/End: Complemental strand, 27396981 - 27396835
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcac 609  Q
    |||||| ||||||||||| ||||||||||||| || | | ||||| |  ||||||||||||||||| |||| |   || | ||||||||||||||||||     
T  27396981 aaaattggtccctgtaatcgctaatcctgacaattcaccactgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcaa 27396882  T
Q  610 taatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
     |||||||||||||| |||||||||  |||| ||||||| |||||||    
T  27396881 gaatttgatgacgtgtcaatcactgttacacatgaaattccaatttt 27396835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 559 - 656
Target Start/End: Original strand, 40379860 - 40379957
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    ||||||||||||||||| |||| |   || | ||||||| |||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||    
T  40379860 ttaatcatttaaaatttcgtccctctccccacttaatcaatgccacgtcactaatttgatgacgtggcaatcactgtcacacatgaaattccaatttt 40379957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 476 - 608
Target Start/End: Complemental strand, 42618330 - 42618197
Alignment:
Q  476 tgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatt 574  Q
    |||||||||| | | ||||||||||||| ||||||||| || || |||||||| |||||||||| || |||| || |||| |  ||||||||||||||||    
T  42618330 tgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagttcctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatt 42618231  T
Q  575 tggtccttggaccaaattaatcactgccacgtca 608  Q
    | |||||| |||||| |||||||||| |||||||    
T  42618230 tcgtcctttgaccaacttaatcactgtcacgtca 42618197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 469 - 608
Target Start/End: Complemental strand, 32068522 - 32068382
Alignment:
Q  469 ggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatt 567  Q
    |||||| |||||||||| | | ||||||||||| | ||||||||| ||  |||||||||| |||||||||| || |||| || |||| |  |||||||||    
T  32068522 ggcttaatgatgtgtttcgtccttgcaattaggagtcatttaaaaattaatccctgtaatcgctaatcctgccaatttacccttgcattgtttaatcatt 32068423  T
Q  568 taaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    |||||||| ||| || |||||| ||||||||||||||||||    
T  32068422 taaaatttcgtcatttgaccaacttaatcactgccacgtca 32068382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 469 - 608
Target Start/End: Original strand, 42617911 - 42618051
Alignment:
Q  469 ggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatt 567  Q
    |||||| |||||||||| | | ||||||||||||| ||||||||| || |||||| |||| ||||||||||||| |||| || |||| |  |||||||||    
T  42617911 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctttaatcgctaatcctgacaatttacccttgcattgtttaatcatt 42618010  T
Q  568 taaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    |||||||| |||||| || ||| ||||||||| ||| ||||    
T  42618011 taaaatttcgtcctttgatcaacttaatcactaccaagtca 42618051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 468 - 599
Target Start/End: Complemental strand, 43266693 - 43266561
Alignment:
Q  468 aggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcat 566  Q
    ||||||| |||||||||| | | ||||||||||||| ||||||||| || |||| |||||| |||||| |||||| |||| || |||| |  ||||||||    
T  43266693 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcgctaattctgacaatttacccttgcattgtttaatcat 43266594  T
Q  567 ttaaaatttggtccttggaccaaattaatcact 599  Q
    ||||||||| |||||| |||||| |||||||||    
T  43266593 ttaaaatttcgtcctttgaccaacttaatcact 43266561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 467 - 605
Target Start/End: Complemental strand, 32934776 - 32934637
Alignment:
Q  467 aaggcttattgatgtgtttagcctttgcaattaggcggcattt-aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatca 565  Q
    |||||||| |||||||||| | | ||||||||||||| ||||| |||||| ||||||||||| ||||||||||||| ||||  | | || |  |||||||    
T  32934776 aaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctgacaatttactcttacattgtttaatca 32934677  T
Q  566 tttaaaatttggtccttggaccaaattaatcactgccacg 605  Q
    |||||||||| ||| || |||||| |||||||||| ||||    
T  32934676 tttaaaatttcgtcatttgaccaacttaatcactgtcacg 32934637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 476 - 600
Target Start/End: Complemental strand, 10600368 - 10600243
Alignment:
Q  476 tgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatt 574  Q
    |||||||||| | | ||||||||||||| ||||||||| || |||| |||||| ||||||||||||| |||| || |||| |  ||||||||| ||||||    
T  10600368 tgatgtgtttcgtcattgcaattaggcgtcatttaaaaattagtccttgtaatcgctaatcctgacaatttacccttgcattgtttaatcattcaaaatt 10600269  T
Q  575 tggtccttggaccaaattaatcactg 600  Q
    | |||||| |||||| ||||||||||    
T  10600268 ttgtcctttgaccaacttaatcactg 10600243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 559 - 656
Target Start/End: Complemental strand, 32053480 - 32053383
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    ||||||||||||||||| |||| |   || | |||||||||| |||||||||||||||||||| |||||||||||| ||||| ||||||| |||||||    
T  32053480 ttaatcatttaaaatttcgtccctctccccacttaatcactgtcacgtcactaatttgatgacatggcaatcactgtcacacatgaaattccaatttt 32053383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 468 - 608
Target Start/End: Original strand, 43266265 - 43266406
Alignment:
Q  468 aggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcat 566  Q
    ||||||| |||||||||| | | ||||||||||||| ||||||||| || |||| |||||| | ||||||||||| |||| || |||| |  ||||||||    
T  43266265 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccatgtaatcgttaatcctgacaatttacccttgcattgtttaatcat 43266364  T
Q  567 ttaaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    |||||||||  || || |||||| |||||||||| |||||||    
T  43266365 ttaaaatttcatcatttgaccaacttaatcactgtcacgtca 43266406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 491 - 662
Target Start/End: Complemental strand, 23181400 - 23181228
Alignment:
Q  491 ttgcaattaggcggcatttaaa-attcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaa 589  Q
    ||||||||||| | | |||||| ||| |||| |||||| ||||||| || || |||| || |||| |  ||||||||||||||||| |||| |    | |    
T  23181400 ttgcaattaggggtcgtttaaatattggtccatgtaatcgctaatcttggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctctcca 23181301  T
Q  590 attaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgccctt 662  Q
     |||||||||| || |||||||||||||||||||||||||||||| || || ||||||| ||||||| |||||    
T  23181300 cttaatcactgtcatgtcactaatttgatgacgtggcaatcactgtcatacatgaaattccaattttaccctt 23181228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 491 - 608
Target Start/End: Original strand, 25628500 - 25628618
Alignment:
Q  491 ttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaa 589  Q
    ||||||||||||| ||||||||| || |||  |||||| | |||||||| || |||| || |||| |  ||||||||||||||||| |||||| ||||||    
T  25628500 ttgcaattaggcgtcatttaaaaattagtcattgtaatcgataatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaa 25628599  T
Q  590 attaatcactgccacgtca 608  Q
     ||||||||||||||||||    
T  25628600 cttaatcactgccacgtca 25628618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 491 - 608
Target Start/End: Original strand, 32934370 - 32934488
Alignment:
Q  491 ttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaa 589  Q
    ||||||||||| | ||||||||| || ||| ||||||| ||||||||||||| |||| || |||| |  ||||||||||||||||| |||||| ||||||    
T  32934370 ttgcaattaggtgtcatttaaaaattagtcgctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaa 32934469  T
Q  590 attaatcactgccacgtca 608  Q
     ||||||||| ||| ||||    
T  32934470 cttaatcactaccaagtca 32934488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 559 - 656
Target Start/End: Original strand, 3914229 - 3914326
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    ||||||||||||||||| |||| |   |||| |||||||||||||| |||||||||||||||||||  |||||||| || || ||||||| |||||||    
T  3914229 ttaatcatttaaaatttcgtccctcttccaacttaatcactgccacatcactaatttgatgacgtgataatcactgtcatacatgaaattccaatttt 3914326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 559 - 620
Target Start/End: Original strand, 17885719 - 17885780
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatga 620  Q
    ||||||||||||||||| |||||| |||| | ||||||||||||||||||||||||||||||    
T  17885719 ttaatcatttaaaatttcgtcctttgacccagttaatcactgccacgtcactaatttgatga 17885780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 468 - 600
Target Start/End: Complemental strand, 33828401 - 33828268
Alignment:
Q  468 aggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcat 566  Q
    ||||||| ||||| |||| | | ||||||||||| | ||||||||| || ||| ||||||| ||||||||||||| |||| || |||| |  ||||||||    
T  33828401 aggcttaatgatgagtttcgtccttgcaattaggtgtcatttaaaaattagtctctgtaatcgctaatcctgacaatttacccttgcattgtttaatcat 33828302  T
Q  567 ttaaaatttggtccttggaccaaattaatcactg 600  Q
    ||||||||| ||| || |||||| ||||||||||    
T  33828301 ttaaaatttcgtcatttgaccaacttaatcactg 33828268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 521 - 656
Target Start/End: Complemental strand, 2640553 - 2640418
Alignment:
Q  521 ctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatga 620  Q
    ||||||| |||||| ||| || |||| || |||| |  ||||||||||||||||| |||  |   || | |||||||||| || ||||||||||||||||    
T  2640553 ctgtaatcgctaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtctctctccccacttaatcactgtcatgtcactaatttgatga 2640454  T
Q  621 cgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    |||||||||| |||||| || ||||||| |||||||    
T  2640453 cgtggcaatccctgccatacatgaaattccaatttt 2640418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 478 - 608
Target Start/End: Complemental strand, 32688637 - 32688506
Alignment:
Q  478 atgtgtttagcctttgcaattaggcggcatttaaaattcg-tccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttg 576  Q
    |||||||| ||| ||||||||||| | ||||||||||| | ||| |||||| |||||||||||||  ||  || ||||| | |||||||||||||||||     
T  32688637 atgtgtttcgcccttgcaattaggggtcatttaaaatttggtccttgtaatcgctaatcctgacaaattgcccttgcaaatattaatcatttaaaatttc 32688538  T
Q  577 gtccttggaccaaattaatcactgccacgtca 608  Q
    |||| | |||| | ||||| ||||||||||||    
T  32688537 gtcccttgacccacttaataactgccacgtca 32688506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 491 - 600
Target Start/End: Complemental strand, 25628882 - 25628772
Alignment:
Q  491 ttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaa 589  Q
    ||||||||| ||| ||||||||| || |||  |||||| ||||||||||||| |||| || |||| |  ||||||||||||||||| |||||| ||||||    
T  25628882 ttgcaattatgcgtcatttaaaaattagtctatgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaa 25628783  T
Q  590 attaatcactg 600  Q
     ||||||||||    
T  25628782 cttaatcactg 25628772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 467 - 608
Target Start/End: Complemental strand, 27138369 - 27138227
Alignment:
Q  467 aaggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatca 565  Q
    |||||||| |||||||||| | | || |||| ||||| ||||||||| || |||| |||||| ||||||||||||| |||| || |||| |  |||||||    
T  27138369 aaggcttaatgatgtgtttcgtcctttcaatcaggcgtcatttaaaaattagtccttgtaatcgctaatcctgacaatttacccttgcattgtttaatca 27138270  T
Q  566 tttaaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    ||||||||||  | ||| |||||| |||||||| |||| ||||    
T  27138269 tttaaaatttctttctttgaccaacttaatcaccgccaagtca 27138227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 476 - 601
Target Start/End: Original strand, 46204428 - 46204554
Alignment:
Q  476 tgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatt 574  Q
    |||||||||| | | ||||||||||||| ||||||||| || ||||||||||| ||||| ||||||| |||| |  |||| |  || |||||||||||||    
T  46204428 tgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaaacctgacaatttaccattgcattattttatcatttaaaatt 46204527  T
Q  575 tggtccttggaccaaattaatcactgc 601  Q
    | |||| | |||||| |||||||||||    
T  46204528 tcgtccattgaccaacttaatcactgc 46204554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 591 - 656
Target Start/End: Original strand, 24388942 - 24389007
Alignment:
Q  591 ttaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    |||||||||||||| |||| |||||||||||||||||||||||| ||||  ||||||| |||||||    
T  24388942 ttaatcactgccacatcaccaatttgatgacgtggcaatcactgtcacatatgaaattccaatttt 24389007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 476 - 608
Target Start/End: Original strand, 32068103 - 32068236
Alignment:
Q  476 tgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatt 574  Q
    |||||||||| | | |||||||||| || ||||||||| || |||| |||||| |||||||||| || |||| || |||| |  ||||||||||||||||    
T  32068103 tgatgtgtttcgtccttgcaattagacgtcatttaaaaattagtccttgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatt 32068202  T
Q  575 tggtccttggaccaaattaatcactgccacgtca 608  Q
    | || ||| |||||| ||||||| ||||| ||||    
T  32068203 tcgtactttgaccaacttaatcaatgccaagtca 32068236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 591 - 656
Target Start/End: Complemental strand, 42019902 - 42019837
Alignment:
Q  591 ttaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    ||||||||||||| ||||||||||||||||||||| |||||||| || || ||||||| |||||||    
T  42019902 ttaatcactgccatgtcactaatttgatgacgtggtaatcactgtcatacatgaaattccaatttt 42019837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 467 - 608
Target Start/End: Complemental strand, 23058857 - 23058715
Alignment:
Q  467 aaggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatca 565  Q
    |||||||| |||||||||| | | |||||||| |||| ||||||||| ||  ||| |||||| | |||||||| || |||| ||  ||| |  |||||||    
T  23058857 aaggcttaatgatgtgtttcgtccttgcaattcggcgtcatttaaaaattaatccttgtaatcgttaatcctggcaatttaccctcgcattgtttaatca 23058758  T
Q  566 tttaaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    |||||||||| ||| || |||||| ||||| ||||||||||||    
T  23058757 tttaaaatttcgtcatttgaccaacttaattactgccacgtca 23058715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 467 - 608
Target Start/End: Original strand, 28890577 - 28890719
Alignment:
Q  467 aaggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatca 565  Q
    |||| ||| |||||||||| | | |||||||||| || ||||||||| || |||| |||||| |||||||||  || |||| || |||| |  |||||||    
T  28890577 aaggtttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaattagtccttgtaatcgctaatcctagcaatttacccttgcattgtttaatca 28890676  T
Q  566 tttaaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    |||||||||| ||| || ||| || |||||||||| |||||||    
T  28890677 tttaaaatttcgtcttttgactaacttaatcactgtcacgtca 28890719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 551 - 604
Target Start/End: Complemental strand, 6571293 - 6571240
Alignment:
Q  551 tgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccac 604  Q
    ||||||| ||||||||||||||||| |||||| |||||| ||||||||||||||    
T  6571293 tgcaattattaatcatttaaaatttcgtcctttgaccaacttaatcactgccac 6571240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 476 - 608
Target Start/End: Complemental strand, 25453547 - 25453414
Alignment:
Q  476 tgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatt 574  Q
    |||||||||| | ||||| ||||| ||| ||||||||| || ||||||| ||| |||||||||  || |||| || |||| |  |||||||||||| |||    
T  25453547 tgatgtgtttcgtctttgtaattaagcgtcatttaaaaattagtccctgaaatcgctaatcctagcaatttacccttgcattgtttaatcatttaacatt 25453448  T
Q  575 tggtccttggaccaaattaatcactgccacgtca 608  Q
    | |||||| |||||  |||||||| |||||||||    
T  25453447 tcgtcctttgaccagcttaatcaccgccacgtca 25453414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 626 - 698
Target Start/End: Original strand, 13311194 - 13311266
Alignment:
Q  626 caatcactgccacacgtgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaa 698  Q
    ||||||||| ||||  |||||||||||||||| |||||||||| ||| | || || |||||||||||||||||    
T  13311194 caatcactgtcacatatgaaatttcaattttgtccttaagaaggggaaagaagatggaagaaagaattggaaa 13311266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 559 - 627
Target Start/End: Complemental strand, 13386084 - 13386016
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggca 627  Q
    |||||||||||||||||  ||||| |||| | ||||||||||||| ||||||||| |||||| ||||||    
T  13386084 ttaatcatttaaaattttatcctttgacccagttaatcactgccatgtcactaatctgatgaggtggca 13386016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 469 - 608
Target Start/End: Original strand, 22081560 - 22081699
Alignment:
Q  469 ggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatt 567  Q
    |||||| |||||||||| | | ||||||||| ||| ||||||||| || |||| | |||| |||||| ||| || |||| || |||| |  |||||||||    
T  22081560 ggcttaatgatgtgtttcgtccttgcaattatgcgtcatttaaaaattagtcc-tctaatcgctaatgctggcaatttacccttgcattgtttaatcatt 22081658  T
Q  568 taaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    |||||||| |||||| || ||| ||||||||||||| ||||    
T  22081659 taaaatttcgtcctttgatcaacttaatcactgccaagtca 22081699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 469 - 608
Target Start/End: Complemental strand, 22081985 - 22081845
Alignment:
Q  469 ggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatt 567  Q
    |||||| |||| ||||| | | ||||||||| ||| ||||||||| || ||  ||||||| |||||||||| || |||| || |||| |  |||||||||    
T  22081985 ggcttaatgatttgtttcgtccttgcaattatgcgtcatttaaaaattagtttctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatt 22081886  T
Q  568 taaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    |||||||| ||| || |||||| ||||||| ||||| ||||    
T  22081885 taaaatttcgtcatttgaccaacttaatcattgccaagtca 22081845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 505 - 580
Target Start/End: Complemental strand, 7356589 - 7356514
Alignment:
Q  505 catttaaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtcc 580  Q
    ||||||||||| ||||||||| ||| ||||||||| ||| || ||||| | |  ||||||||||||||||||||||    
T  7356589 catttaaaattggtccctgtatttgttaatcctgatattatacccctgaactatttaatcatttaaaatttggtcc 7356514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 591 - 656
Target Start/End: Complemental strand, 13311338 - 13311276
Alignment:
Q  591 ttaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    |||||||||||||| |   ||||||||||||||| ||||||||||||||| ||||||| |||||||    
T  13311338 ttaatcactgccacat---taatttgatgacgtgacaatcactgccacacatgaaattccaatttt 13311276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 510 - 605
Target Start/End: Original strand, 17102062 - 17102157
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacg 605  Q
    |||||| ||||||||||| |||||||||| || |||| ||||||| |  ||||||||||||||||| |||| |   || | |||||||||||||||    
T  17102062 aaaattggtccctgtaatcgctaatcctggcaatttacccctgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 17102157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 478 - 608
Target Start/End: Complemental strand, 18087757 - 18087626
Alignment:
Q  478 atgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttg 576  Q
    |||||||||| | ||||||||||| | ||||||||| || ||| ||||||| |||||||||  ||   || || ||||||| |||||||||||||||||     
T  18087757 atgtgtttagtccttgcaattaggggtcatttaaaaattggtcactgtaatcgctaatccttgcaaaatagccttgcaattattaatcatttaaaatttt 18087658  T
Q  577 gtccttggaccaaattaatcactgccacgtca 608  Q
    |||| |  ||| | ||||| ||||||||||||    
T  18087657 gtcccttaacccacttaatgactgccacgtca 18087626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 559 - 656
Target Start/End: Original strand, 45010689 - 45010783
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    ||||||||||||||||| |||| |   || | ||||||||||||| ||||||||||||||   |||||||||| || ||||| ||||||| |||||||    
T  45010689 ttaatcatttaaaatttcgtccatctccccacttaatcactgccaagtcactaatttgat---gtggcaatcattgtcacacatgaaattccaatttt 45010783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 510 - 580
Target Start/End: Original strand, 6253513 - 6253583
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtcc 580  Q
    |||||| ||||||||||| |||||||||| || |||| ||||||| |  ||||||||||||||||| ||||    
T  6253513 aaaattggtccctgtaatcgctaatcctggcaatttacccctgcattgtttaatcatttaaaatttcgtcc 6253583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 591 - 656
Target Start/End: Original strand, 37656975 - 37657038
Alignment:
Q  591 ttaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    |||||||| | |||||||||||||||||||||||||||| |||| ||||  ||||||| |||||||    
T  37656975 ttaatcaccggcacgtcactaatttgatgacgtggcaattactgtcaca--tgaaattccaatttt 37657038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 491 - 603
Target Start/End: Original strand, 13044694 - 13044807
Alignment:
Q  491 ttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaa 589  Q
    ||||||||||||| ||||||||| |||||||| ||||| |||| |||||||| |||| |  |||| |  |||||||||||||| || |||| |  || ||    
T  13044694 ttgcaattaggcgccatttaaaatttcgtcccagtaatcgctactcctgacaatttaccattgcattgtttaatcatttaaaaattcgtcccttaacaaa 13044793  T
Q  590 attaatcactgcca 603  Q
     |||||||||||||    
T  13044794 cttaatcactgcca 13044807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 559 - 603
Target Start/End: Complemental strand, 24389122 - 24389078
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgcca 603  Q
    ||||||||||||||||| |||||| |||||| |||||||||||||    
T  24389122 ttaatcatttaaaattttgtcctttgaccaacttaatcactgcca 24389078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 520 - 608
Target Start/End: Complemental strand, 46205683 - 46205595
Alignment:
Q  520 cctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    |||||||| | |||||||||||  ||| || |||| |  ||||||||||||||||| |||||| |||||| |||||||||  |||||||    
T  46205683 cctgtaatcgttaatcctgacaaattacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactatcacgtca 46205595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 517 - 581
Target Start/End: Original strand, 47733069 - 47733133
Alignment:
Q  517 gtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtcct 581  Q
    |||||||||||| ||||||||  || |||| |||||||| | ||||||| |||||||||||||||    
T  47733069 gtccctgtaattactaatcctcccaatttacccctgcaaatattaatcacttaaaatttggtcct 47733133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 559 - 626
Target Start/End: Complemental strand, 12229409 - 12229342
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggc 626  Q
    ||||||||| ||||||| |||| |  ||| | ||||| |||||||||||| |||||||||||||||||    
T  12229409 ttaatcattaaaaatttcgtcccttaacccacttaatgactgccacgtcattaatttgatgacgtggc 12229342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 518 - 605
Target Start/End: Original strand, 27991789 - 27991876
Alignment:
Q  518 tccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacg 605  Q
    |||||||||| |||||||||| || |||| ||||||| |  ||||||||||||||||| |||| |   || | |||||||||||||||    
T  27991789 tccctgtaatcgctaatcctggcaatttacccctgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 27991876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 510 - 580
Target Start/End: Original strand, 6571055 - 6571125
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtcc 580  Q
    |||||| ||||||||||| | ||||||||||| |||| || |||| |  ||||||||||||||||| ||||    
T  6571055 aaaattggtccctgtaatcgttaatcctgacaatttacccttgcattgtttaatcatttaaaattttgtcc 6571125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 559 - 608
Target Start/End: Original strand, 39274961 - 39275011
Alignment:
Q  559 ttaatcatttaaaatttggtccttg-gaccaaattaatcactgccacgtca 608  Q
    ||||||||||||||||| ||||||  |||||| ||||||||||||||||||    
T  39274961 ttaatcatttaaaatttcgtccttttgaccaacttaatcactgccacgtca 39275011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 559 - 608
Target Start/End: Complemental strand, 17886827 - 17886778
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    ||||||||||||||||| |||| | |||| | ||||||||||||||||||    
T  17886827 ttaatcatttaaaatttcgtcccttgacccacttaatcactgccacgtca 17886778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 491 - 575
Target Start/End: Complemental strand, 22871683 - 22871598
Alignment:
Q  491 ttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaattt 575  Q
    ||||||||||| | ||||||||| || ||||||||||| |||||||||  || |||| || |||| |  |||||||||||||||||    
T  22871683 ttgcaattaggggtcatttaaaaattggtccctgtaatagctaatccttgcaatttacccttgcattgtttaatcatttaaaattt 22871598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 203; Significance: 1e-110; HSPs: 48)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 472 - 717
Target Start/End: Original strand, 28000388 - 28000634
Alignment:
Q  472 ttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaa 570  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||    
T  28000388 ttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctttaattgctaatcctgtcattttaaccctgcaattgttaatcgtttaa 28000487  T
Q  571 aatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaagaagag 670  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||     
T  28000488 aatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgtcacacatgaaattccaattttgcccttaagaagat 28000587  T
Q  671 gacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||    
T  28000588 gacaaaatattgaagaaagaattggaaacccaggggtaaatttggaa 28000634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 172; E-Value: 5e-92
Query Start/End: Original strand, 467 - 717
Target Start/End: Original strand, 14196613 - 14196864
Alignment:
Q  467 aaggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatca 565  Q
    |||||||| ||||||| |||| | ||||||||||||| ||||||||| ||||||||||||||||||||| ||| || |||| |  |||||||||||||||    
T  14196613 aaggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaattctggcaatttagctttgcaattgttaatca 14196712  T
Q  566 tttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaag 665  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||    
T  14196713 tttaaaatttggtccttggaccaacttaatcactgtcacgtcactaatttgatgacgtggcaatcactgtcacacatgaaattccaattttgcccttaag 14196812  T
Q  666 aagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  14196813 aagaggacaaaatattgaagaaagaattgggaacccaggggtaaatttggaa 14196864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 467 - 661
Target Start/End: Original strand, 362868 - 363063
Alignment:
Q  467 aaggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatca 565  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||     
T  362868 aaggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgttaatcctggcattttaaccctgcaattgttaatcg 362967  T
Q  566 tttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgccct 661  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||| ||||||||||||    
T  362968 tttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtgacaatcactgtcacacatgaaattccaattttgccct 363063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 491 - 717
Target Start/End: Complemental strand, 30337824 - 30337597
Alignment:
Q  491 ttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaa 589  Q
    ||||||||||| | ||||||||| || ||||||||||| |||||||||  ||   || || ||||||  ||||||||||||||||| |||||| ||||||    
T  30337824 ttgcaattaggggtcatttaaaaattggtccctgtaatcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgaccaa 30337725  T
Q  590 attaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaag 689  Q
     ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  30337724 tttaatcactgccacgtcactaatttgatgacatggcaatcactgccacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaag 30337625  T
Q  690 aattggaaacccaggggtgaatttggaa 717  Q
    ||||| |||| ||||||| || ||||||    
T  30337624 aattgaaaactcaggggtaaaattggaa 30337597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 510 - 707
Target Start/End: Complemental strand, 33517920 - 33517723
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcac 609  Q
    |||||| ||||||||| | |||||||||  ||   || || ||||||  ||||||||||||||||| |||||| |||||| |||||||||||||||||||    
T  33517920 aaaattggtccctgtattcgctaatccttgcaaagtagccttgcaatcattaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcac 33517821  T
Q  610 taatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggt 707  Q
    |||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  33517820 taatttgatgacgtggcaatcaatgacacacatgaaatttcaattttgcccttaagaagaggacaaaatattgaagacagaattggaaacccaggggt 33517723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 559 - 717
Target Start/End: Original strand, 21627804 - 21627962
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| |||||| |||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||| |||||||||    
T  21627804 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatttgatgacgtgacaatcactgtcacacatgaaattccaattttgc 21627903  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||    
T  21627904 ccttaagaagaggacaaaatattgaagaaagaattggaaacccgggggtaaaattggaa 21627962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 559 - 717
Target Start/End: Complemental strand, 30726096 - 30725938
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| |||||| |||||| |||||||||||||||||||||||| |||||||| ||||||||| |||||| ||||||| |||||||||    
T  30726096 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaattcgatgacgttgcaatcactaccacacatgaaattccaattttgc 30725997  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  30725996 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaaattggaa 30725938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 522 - 717
Target Start/End: Original strand, 17734250 - 17734443
Alignment:
Q  522 tgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgac 621  Q
    ||||||||||||||||  ||   || || ||||||  ||||||||||||||||| |||||| |||||| |||||||||||||||||||||||||||||||    
T  17734250 tgtaattgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgaccaatttaatcactgccacgtcactaatttgatgac 17734349  T
Q  622 gtggcaatcactgccacacgtgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    |||||||| |||||||||| ||||||| ||||||||||||||  |||||||||||||||||||||||||||||||||| ||||||| || ||||||    
T  17734350 gtggcaattactgccacacatgaaattacaattttgccctta--aagaggacaaaatattgaagaaagaattggaaactcaggggtaaaattggaa 17734443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 559 - 707
Target Start/End: Complemental strand, 30804198 - 30804050
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||| |    
T  30804198 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcactaatttgatgacgtggcaatcactaccacacatgaaattccaattttac 30804099  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggt 707  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  30804098 ccttaagaagaggacaaaatattgaagaaagaattgaaaacccaagggt 30804050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 510 - 717
Target Start/End: Complemental strand, 3059642 - 3059436
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcac 609  Q
    |||||| ||||||||| | |||||||||  ||   || || ||||||  |||||||||||||||||  || || |||||| ||||||||||||| |||||    
T  3059642 aaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcatcttttgaccaacttaatcactgccatgtcac 3059543  T
Q  610 taatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtga 709  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||| |    
T  3059542 taatttgatgacgtgacaatcactgccacacgtgaaattccaattttgcccttaagaagtggac-aaatattgaagaaagaattggaaacctaggggtaa 3059444  T
Q  710 atttggaa 717  Q
    | ||||||    
T  3059443 aattggaa 3059436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 559 - 717
Target Start/End: Complemental strand, 12080973 - 12080815
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| |||||| |||||| ||||| |||| || |||||||||| ||||||||| |||||||| |||||| ||||||| |||||||||    
T  12080973 ttaatcatttaaaatttcgtcctttgaccaacttaattactgtcatgtcactaattcgatgacgtgacaatcactaccacacatgaaattccaattttgc 12080874  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||    
T  12080873 ccttaagaagaggacaaaatattgaagaaagaattggaaacacaggggtaaaattggaa 12080815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 467 - 603
Target Start/End: Complemental strand, 22373087 - 22372950
Alignment:
Q  467 aaggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatca 565  Q
    ||||||||||||||| ||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  22373087 aaggcttattgatgttttttgcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaatcctgcaattgttaatca 22372988  T
Q  566 tttaaaatttggtccttggaccaaattaatcactgcca 603  Q
    ||||||||||| |||||||||||||||||| |||||||    
T  22372987 tttaaaatttgatccttggaccaaattaatgactgcca 22372950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 467 - 595
Target Start/End: Original strand, 22367423 - 22367552
Alignment:
Q  467 aaggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatca 565  Q
    |||||||||||||||  || ||| |||||||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  22367423 aaggcttattgatgttatttgcccttgcaattaggcagcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatca 22367522  T
Q  566 tttaaaatttggtccttggaccaaattaat 595  Q
    ||||||||||||||||| ||||||||||||    
T  22367523 tttaaaatttggtcctttgaccaaattaat 22367552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 510 - 682
Target Start/End: Complemental strand, 33647337 - 33647165
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcac 609  Q
    |||||| ||||||||| | |||||||||  ||   ||||| ||||||  ||||||||||||||||| |||||| ||| || |||||||||||||||||||    
T  33647337 aaaattggtccctgtattcgctaatccttgcaaactaaccttgcaatcattaatcatttaaaatttagtcctttgacaaacttaatcactgccacgtcac 33647238  T
Q  610 taatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaagaagaggacaaaatattg 682  Q
     ||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||||    
T  33647237 aaatttgatgacatggcaatcactaccacacgtgaaattccaattttgcccttaagaagaggacaaaaaattg 33647165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 469 - 605
Target Start/End: Complemental strand, 363227 - 363090
Alignment:
Q  469 ggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatt 567  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||    
T  363227 ggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtt 363128  T
Q  568 taaaatttggtccttggaccaaattaatcactgccacg 605  Q
    |||||||| |||| |   || | |||||||||||||||    
T  363127 taaaatttcgtccctctccccacttaatcactgccacg 363090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 510 - 656
Target Start/End: Complemental strand, 21628099 - 21627953
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcac 609  Q
    |||||| ||||||||||| ||||||||||||| |||| || |||| |  ||||||||||||||||| |||| |   || | |||||||||||||||||||    
T  21628099 aaaattggtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaattttgtccctctccccacttaatcactgccacgtcac 21628000  T
Q  610 taatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||    
T  21627999 taatttgatgacgtggcaatcactgccacacatgaaattccaatttt 21627953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 476 - 600
Target Start/End: Original strand, 25485960 - 25486085
Alignment:
Q  476 tgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatt 574  Q
    ||||||| |||| | ||||||||| ||| ||||||||| ||||||||||||||||||||||||| || |||| || ||||||||||||||||||||||||    
T  25485960 tgatgtgattagtccttgcaattaagcgtcatttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcatttaaaatt 25486059  T
Q  575 tggtccttggaccaaattaatcactg 600  Q
    ||||||||||||||| ||||||||||    
T  25486060 tggtccttggaccaatttaatcactg 25486085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 627 - 717
Target Start/End: Complemental strand, 11393107 - 11393017
Alignment:
Q  627 aatcactgccacacgtgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    |||||||||||||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| || ||||||    
T  11393107 aatcactgccacacgtgaaattccaattttgcccttaagaagatggcaaaatattgaagaaagaattggaaacccaggggtaaaattggaa 11393017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 468 - 603
Target Start/End: Original strand, 32593489 - 32593625
Alignment:
Q  468 aggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcat 566  Q
    ||||||| |||||||||||| | || |||||||||| ||||||||| || |||||| |||| ||||||||||||| |||| || |||| |||||||||||    
T  32593489 aggcttaatgatgtgtttagtcctttcaattaggcgtcatttaaaaattagtccctataatcgctaatcctgacaatttacccttgcatttgttaatcat 32593588  T
Q  567 ttaaaatttggtccttggaccaaattaatcactgcca 603  Q
    ||||||||| ||| ||||||||| |||||||||||||    
T  32593589 ttaaaatttcgtctttggaccaacttaatcactgcca 32593625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 467 - 605
Target Start/End: Complemental strand, 28000784 - 28000645
Alignment:
Q  467 aaggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatca 565  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||| || ||| |||||||||||||| ||| || |||| || |||||||||||||||    
T  28000784 aaggcttattgatctgtttagcccttgcaattaggcggcatttaaaaatttgtctctgtaattgctaattctggcaatttagccttgcaattgttaatca 28000685  T
Q  566 tttaaaatttggtccttggaccaaattaatcactgccacg 605  Q
    |||||||||| |||| |   || | |||||||||||||||    
T  28000684 tttaaaatttcgtccctctccccacttaatcactgccacg 28000645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 623 - 705
Target Start/End: Original strand, 25486084 - 25486166
Alignment:
Q  623 tggcaatcactgccacacgtgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggg 705  Q
    |||||||||||| ||||| ||||||| ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||    
T  25486084 tggcaatcactgtcacacatgaaattccaattttgctcttaagaaggggacaaaatattgaagaaagaattggaaacccaggg 25486166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 510 - 656
Target Start/End: Original strand, 30725801 - 30725947
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcac 609  Q
    |||||| ||| ||||||| |||||||||| || |||| || |||| |  ||||||||||||||||| |||| |   || | ||||||||||||| |||||    
T  30725801 aaaattggtctctgtaatcgctaatcctgccaatttacccttgcactgtttaatcatttaaaatttcgtccctctccccatttaatcactgccatgtcac 30725900  T
Q  610 taatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    |||||||||||||||||||||||||||| || ||||||| |||||||    
T  30725901 taatttgatgacgtggcaatcactgccatacatgaaattccaatttt 30725947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 510 - 656
Target Start/End: Original strand, 33517576 - 33517722
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcac 609  Q
    |||||| ||||||||||| |||||||||| || |||| || |||| |  ||||||||||||||||| |||| |   || | ||||||||||| |||||||    
T  33517576 aaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgctacgtcac 33517675  T
Q  610 taatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    |||||||||||||||||||||| || || || |||||||||||||||    
T  33517676 taatttgatgacgtggcaatcattgtcatacatgaaatttcaatttt 33517722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 470 - 575
Target Start/End: Complemental strand, 14197011 - 14196905
Alignment:
Q  470 gcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcattt 568  Q
    ||||| ||||||| |||| | ||||||||||||| | ||||||| ||||||||||||||||||||||||| || |||| || ||||||||||||||||||    
T  14197011 gcttaatgatgtgattagtccttgcaattaggcgtcgtttaaaaattcgtccctgtaattgctaatcctggcaatttagccttgcaattgttaatcattt 14196912  T
Q  569 aaaattt 575  Q
    |||||||    
T  14196911 aaaattt 14196905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 491 - 608
Target Start/End: Complemental strand, 31407282 - 31407164
Alignment:
Q  491 ttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaa 589  Q
    ||||||||||||| ||||||||| || ||||||||||| ||||||||||||| |||| || |||| |  ||||||||||||||||| |||||| ||||||    
T  31407282 ttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaa 31407183  T
Q  590 attaatcactgccacgtca 608  Q
     |||||||||| |||||||    
T  31407182 cttaatcactgtcacgtca 31407164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 518 - 656
Target Start/End: Original strand, 33647013 - 33647151
Alignment:
Q  518 tccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttga 617  Q
    |||||||||| ||||||| || || |||| || |||| |  ||||||||||||||||| |||  |   || | |||||||||||||||||||||||||||    
T  33647013 tccctgtaatcgctaatcttgccaatttacccttgcattatttaatcatttaaaatttcgtctctctccccatttaatcactgccacgtcactaatttga 33647112  T
Q  618 tgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    ||||||||||||||||| ||||| ||||||| |||||||    
T  33647113 tgacgtggcaatcactgtcacacatgaaattccaatttt 33647151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 559 - 662
Target Start/End: Original strand, 30803952 - 30804055
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| |||| |   || | |||||||||||||  |||||||||||||||||||||||||||||||| || ||||||||||||||| |    
T  30803952 ttaatcatttaaaatttcgtccctctccccacttaatcactgccatctcactaatttgatgacgtggcaatcactgccatacatgaaatttcaattttac 30804051  T
Q  659 cctt 662  Q
    ||||    
T  30804052 cctt 30804055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 510 - 656
Target Start/End: Original strand, 11392880 - 11393026
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcac 609  Q
    |||||| |||| |||||| ||||||||| | | |||| || |||| |  ||||||||||||||||| |||  |   |||| ||||||||||||| |||||    
T  11392880 aaaattggtccttgtaatcgctaatcctaataatttacccttgcattgtttaatcatttaaaatttcgtctatctcccaacttaatcactgccatgtcac 11392979  T
Q  610 taatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    ||||||||||||||| ||||||||| ||||| ||||||| |||||||    
T  11392980 taatttgatgacgtgacaatcactgtcacacatgaaattccaatttt 11393026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 468 - 608
Target Start/End: Complemental strand, 21836457 - 21836316
Alignment:
Q  468 aggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcat 566  Q
    ||||||| ||||||||||   | ||||||||||||| ||||||||| || || | |||||| ||||||||||||| |||| || |||| |  ||||||||    
T  21836457 aggcttaatgatgtgtttcatccttgcaattaggcgtcatttaaaaattagttcttgtaatcgctaatcctgacaatttacccttgcattgtttaatcat 21836358  T
Q  567 ttaaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    ||||||||| |||||| |||||| ||||||||||||| ||||    
T  21836357 ttaaaatttcgtcctttgaccaacttaatcactgccaagtca 21836316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 476 - 608
Target Start/End: Original strand, 22502781 - 22502914
Alignment:
Q  476 tgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatt 574  Q
    |||||||||| | | ||||||||||||| ||||||||| || |||| |||||| ||||||||||||| |||| || |||| |  ||||||||||||||||    
T  22502781 tgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccttgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatt 22502880  T
Q  575 tggtccttggaccaaattaatcactgccacgtca 608  Q
    | |||||| |||||| ||||| ||||||| ||||    
T  22502881 tcgtcctttgaccaacttaataactgccaagtca 22502914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 518 - 656
Target Start/End: Original strand, 12080686 - 12080824
Alignment:
Q  518 tccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttga 617  Q
    |||||||||| ||||||| || || |||| ||||||| |  ||||||||||||||||| |||| |   || | ||||||||||||| |||||||||||||    
T  12080686 tccctgtaatcgctaatcatggcaatttacccctgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccatgtcactaatttga 12080785  T
Q  618 tgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    ||| ||||||||||||| || |  ||||||| |||||||    
T  12080786 tgatgtggcaatcactgtcatatatgaaattccaatttt 12080824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 467 - 608
Target Start/End: Complemental strand, 22503202 - 22503060
Alignment:
Q  467 aaggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatca 565  Q
    |||||||| | |||||||| | | ||||||||||||| ||||||||| || |||| |||||| |||||||||| || |||| || |||| |  |||||||    
T  22503202 aaggcttaataatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccttgtaatcgctaatcctggcaatttatccttgcattgtttaatca 22503103  T
Q  566 tttaaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    |||||| ||| ||| || |||||| ||||||||||||||||||    
T  22503102 tttaaattttcgtcatttgaccaacttaatcactgccacgtca 22503060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 476 - 608
Target Start/End: Original strand, 7160811 - 7160944
Alignment:
Q  476 tgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatt 574  Q
    |||||||||| | | ||||||||||||| ||||||||| || ||| ||||||| |||||||||| || ||||  | |||| |  ||||||||||||||||    
T  7160811 tgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctctgtaatcgctaatcctggcaatttactcttgcattgtttaatcatttaaaatt 7160910  T
Q  575 tggtccttggaccaaattaatcactgccacgtca 608  Q
    | |||||| |||||| ||||||||| ||||||||    
T  7160911 tcgtcctttgaccaacttaatcactaccacgtca 7160944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 466 - 580
Target Start/End: Complemental strand, 25486326 - 25486211
Alignment:
Q  466 gaaggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatc 564  Q
    ||||||||| |||| || |||| | |||||| || ||| | ||||||| ||||||||||||||||||||||| | || |||| || ||||||||||||||    
T  25486326 gaaggcttaatgatatggttagtccttgcaactaagcgtcgtttaaaaattcgtccctgtaattgctaatcccggcaatttagccttgcaattgttaatc 25486227  T
Q  565 atttaaaatttggtcc 580  Q
    ||||||||||| ||||    
T  25486226 atttaaaatttcgtcc 25486211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 559 - 620
Target Start/End: Original strand, 11434893 - 11434954
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatga 620  Q
    ||||||||||||||||| |||||| |||| | ||||||||||||||||||||||||||||||    
T  11434893 ttaatcatttaaaatttcgtcctttgacccagttaatcactgccacgtcactaatttgatga 11434954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 469 - 608
Target Start/End: Original strand, 6517503 - 6517642
Alignment:
Q  469 ggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatt 567  Q
    |||||| |||||||||| | | ||||||||||||| ||||||||| || |||  |||||| |||||||||| || |||| || |||| |  |||||||||    
T  6517503 ggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtctttgtaatcgctaatcctggcaattta-ccttgcattgtttaatcatt 6517601  T
Q  568 taaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    |||||||| |||||| |||||| ||||||||| ||| ||||    
T  6517602 taaaatttcgtcctttgaccaacttaatcactaccaagtca 6517642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 517 - 656
Target Start/End: Original strand, 3059306 - 3059445
Alignment:
Q  517 gtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttg 616  Q
    |||| |||||| |||||||||  || |||| || |||| |  ||||||||||||||||| |||| |   |  | ||||||||||||| ||||||||| ||    
T  3059306 gtccatgtaatcgctaatcctagcaatttacccttgcattgtttaatcatttaaaatttcgtccctctcctcacttaatcactgccatgtcactaatgtg 3059405  T
Q  617 atgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    ||||||||||||||| || ||||| ||||||| |||||||    
T  3059406 atgacgtggcaatcattgtcacacatgaaattccaatttt 3059445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 467 - 608
Target Start/End: Complemental strand, 7905671 - 7905529
Alignment:
Q  467 aaggcttattgatgtgtttagcctttgcaattaggcggcattta-aaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatca 565  Q
    |||| ||| |||||||||| | | ||||||||||| | |||||| ||||| |||||| |||| |||||| ||| || |||| || |||| |  |||||||    
T  7905671 aaggtttaatgatgtgtttcgtccttgcaattaggtgtcatttataaatttgtccctataatcgctaattctggcaatttacccttgcattgtttaatca 7905572  T
Q  566 tttaaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    ||| |||||| ||| || |||||| ||||||||||||||||||    
T  7905571 tttcaaatttcgtcatttgaccaacttaatcactgccacgtca 7905529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 470 - 598
Target Start/End: Original strand, 7905244 - 7905373
Alignment:
Q  470 gcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcattt 568  Q
    ||||| |||||||||| | | ||||||||||||| ||||||||| || |||| |||||| | |||||||| || |||| || |||| |  ||||||||||    
T  7905244 gcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccttgtaatcgttaatcctggcaatttacccttgcattatttaatcattt 7905343  T
Q  569 aaaatttggtccttggaccaaattaatcac 598  Q
    ||||||| ||| || |||||| ||||||||    
T  7905344 aaaatttcgtcatttgaccaacttaatcac 7905373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 491 - 598
Target Start/End: Complemental strand, 7161208 - 7161100
Alignment:
Q  491 ttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaa 589  Q
    ||||||||||||| ||||||||| || |||||| ||||  |||||||||||| |||| || |||| |  ||||||||||||||||| ||| || ||||||    
T  7161208 ttgcaattaggcgtcatttaaaaattagtccctataatcactaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtcatttgaccaa 7161109  T
Q  590 attaatcac 598  Q
     ||||||||    
T  7161108 cttaatcac 7161100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 491 - 608
Target Start/End: Original strand, 21836054 - 21836170
Alignment:
Q  491 ttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaa 589  Q
    ||||||||||||| ||||||||| || |||  |||||| |||||||||| || |||| || |||| |  ||||||||||||||||| |||||| || |||    
T  21836054 ttgcaattaggcgtcatttaaaaattagtct-tgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttga-caa 21836151  T
Q  590 attaatcactgccacgtca 608  Q
     ||||||||||||||||||    
T  21836152 cttaatcactgccacgtca 21836170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 559 - 627
Target Start/End: Original strand, 12407599 - 12407667
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggca 627  Q
    |||||||||||||||||||||| || ||| | ||||| |||||||||||||||||| | | ||||||||    
T  12407599 ttaatcatttaaaatttggtccctgaacctagttaattactgccacgtcactaattagctcacgtggca 12407667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 510 - 605
Target Start/End: Original strand, 30337491 - 30337586
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacg 605  Q
    |||||| ||||||||||| |||||||||| || |||| || |||| | |||||||||||||||||| |||| |   || | |||||||||||||||    
T  30337491 aaaattggtccctgtaatcgctaatcctggcaatttacccttgcattggttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 30337586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 559 - 623
Target Start/End: Complemental strand, 28498362 - 28498298
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgt 623  Q
    |||||||||||||||||||||| ||  || | |||||||||||||||||||| ||| | ||||||    
T  28498362 ttaatcatttaaaatttggtccctgagcccagttaatcactgccacgtcactgattagctgacgt 28498298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 559 - 623
Target Start/End: Complemental strand, 29810773 - 29810709
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgt 623  Q
    |||||||||||||||||||||| ||  || | |||||||||||||||||||| ||| | ||||||    
T  29810773 ttaatcatttaaaatttggtccctgagcccagttaatcactgccacgtcactgattagctgacgt 29810709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 491 - 608
Target Start/End: Original strand, 15913570 - 15913688
Alignment:
Q  491 ttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaa 589  Q
    ||||||||||||| ||||||||| || |||  ||||||||||||| |||  | |||| || |||| |  ||||||||||||||||| ||| || || |||    
T  15913570 ttgcaattaggcgtcatttaaaaattagtctttgtaattgctaattctggtaatttacccttgcattgtttaatcatttaaaatttcgtcatttgaacaa 15913669  T
Q  590 attaatcactgccacgtca 608  Q
     ||||||||| ||| ||||    
T  15913670 cttaatcactaccaagtca 15913688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 559 - 608
Target Start/End: Complemental strand, 15913883 - 15913834
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    ||||| ||||||||||| |||||| |||||| |||||||||| |||||||    
T  15913883 ttaataatttaaaatttcgtcctttgaccaacttaatcactgtcacgtca 15913834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 551 - 608
Target Start/End: Complemental strand, 20651992 - 20651935
Alignment:
Q  551 tgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    |||||| |||||||||||||||||| |||| || ||| | ||||| ||||||||||||    
T  20651992 tgcaatcgttaatcatttaaaatttcgtccctgaacccagttaattactgccacgtca 20651935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 195; Significance: 1e-106; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 472 - 717
Target Start/End: Original strand, 141597 - 141843
Alignment:
Q  472 ttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaa 570  Q
    |||||||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  141597 ttattgatgtgtttagcccttgcaattagacggcatttaaaaattcgtccctgtaattgctaatcctggcattttaaccctgcaattgttaatcgtttaa 141696  T
Q  571 aatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaagaagag 670  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| | ||||| |||||||||||||||||||||    
T  141697 aatttagtccttggaccaaattaatcactgccacgtcactaatttgatgacgtgacaatcactgtcacacataaaattccaattttgcccttaagaagag 141796  T
Q  671 gacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||    
T  141797 gacaaaatattgaagaaagaattggaaacccaggggtaaatttggaa 141843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 468 - 605
Target Start/End: Complemental strand, 141992 - 141854
Alignment:
Q  468 aggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcat 566  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  141992 aggcttattgatgtgtttagcccttgcaattaggcggcatttaaaaattcatccctgtaattgctaatcctggcattttaaccctgcaattgttaatcat 141893  T
Q  567 ttaaaatttggtccttggaccaaattaatcactgccacg 605  Q
    ||||||||| |||| |   || | |||||||||||||||    
T  141892 ttaaaatttcgtccctctccccacttaatcactgccacg 141854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0559 (Bit Score: 185; Significance: 1e-100; HSPs: 2)
Name: scaffold0559
Description:

Target: scaffold0559; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 467 - 717
Target Start/End: Complemental strand, 1636 - 1381
Alignment:
Q  467 aaggcttattgatgtgttt-agcctttgcaatta-ggcggcatttaaaa--ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaa 562  Q
    ||||||||||||||||||| |||| ||||||||| ||||||||||||||  ||||| |||||||||| |||||||| |||||||||||||||||||||||    
T  1636 aaggcttattgatgtgttttagcccttgcaattaaggcggcatttaaaaaattcgttcctgtaattgttaatcctggcattttaaccctgcaattgttaa 1537  T
Q  563 tcatttaaaa-tttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgccct 661  Q
    || ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||    
T  1536 tcgtttaaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgtcacacatgaaattacaattttgccct 1437  T
Q  662 taagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  1436 taagaagaggacaaaatattgaagaaagaattggaaacccaggggtaaatttggaa 1381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0559; HSP #2
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 469 - 605
Target Start/End: Original strand, 1233 - 1370
Alignment:
Q  469 ggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatt 567  Q
    |||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1233 ggcttattgatgtgtttaacccttgcaattaggcggcatttaaaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatt 1332  T
Q  568 taaaatttggtccttggaccaaattaatcactgccacg 605  Q
    |||||||| |||| |   || | |||||||||||||||    
T  1333 taaaatttcgtccctctccccacttaatcactgccacg 1370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 119; Significance: 2e-60; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 551 - 717
Target Start/End: Complemental strand, 2488 - 2322
Alignment:
Q  551 tgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttc 650  Q
    ||||||| ||||||||||||||||| | |||| |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  2488 tgcaattattaatcatttaaaatttcgccctttgaccaacttaatcactgccacatcactaatttgatgacgtggcaatcactgccacacatgaaatttc 2389  T
Q  651 aattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| ||| |||| || ||||||    
T  2388 aattttgcccttaagaagaggacaaaatattgaagaaagaattgaaaatccaagggtaaaattggaa 2322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 559 - 662
Target Start/End: Original strand, 2234 - 2337
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| |||| |   || | ||||||||||||| |||| ||||||||||||||||||||||  | ||||| ||||||| ||||||| |    
T  2234 ttaatcatttaaaattttgtccctctccccacttaatcactgccatgtcaataatttgatgacgtggcaatcatcgtcacacatgaaattccaattttac 2333  T
Q  659 cctt 662  Q
    ||||    
T  2334 cctt 2337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 115; Significance: 5e-58; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 559 - 717
Target Start/End: Complemental strand, 139978 - 139820
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||| ||||||||||| |||||| |||||| ||||| ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  139978 ttaattatttaaaatttagtcctttgaccaacttaataactgccacgtcactaatttgatgacgtggcaatcactgccaaacatgaaatttcaattttgc 139879  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
     ||||||||||||| |||||||||||||||||||||||||||||||||| || ||||||    
T  139878 tcttaagaagaggataaaatattgaagaaagaattggaaacccaggggtaaaattggaa 139820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 113; Significance: 8e-57; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 510 - 717
Target Start/End: Complemental strand, 2127 - 1917
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacg---t 606  Q
    |||||| ||||||| ||||||||||| |  ||   || || ||||||  ||||||||||||||||| || ||| |||||| |||||||||||||||   |    
T  2127 aaaattggtccctgaaattgctaatctttgcaaactatccttgcaatcattaatcatttaaaatttcgttctttgaccaatttaatcactgccacgacgt 2028  T
Q  607 cactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccagggg 706  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  2027 cactaatttgatgacgtggcaatcactgccacacatgaaatttcaatttttcccttaagaagaggacaaaatattgaagaaagaattggaaacctagggg 1928  T
Q  707 tgaatttggaa 717  Q
    | || ||||||    
T  1927 taaaattggaa 1917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 108; Significance: 7e-54; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 510 - 717
Target Start/End: Complemental strand, 69351 - 69144
Alignment:
Q  510 aaaattcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcac 609  Q
    |||||| ||||||||| | |||||||||  ||   || || ||||||  ||||||||||||||||| ||||||  ||||| |||||||||||||||| ||    
T  69351 aaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttaaccaacttaatcactgccacgttac 69252  T
Q  610 taatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtga 709  Q
    ||||  |||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |    
T  69251 taatacgatgacgtggcaatcactaccacacatgaaattccaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacctaggggtaa 69152  T
Q  710 atttggaa 717  Q
    | ||||||    
T  69151 aattggaa 69144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 491 - 656
Target Start/End: Original strand, 68987 - 69153
Alignment:
Q  491 ttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaa 589  Q
    ||||||||||| | ||||||||| || |||||||||||  ||||||||| || |||| || |||| |  ||||||||||||||||| |||| |   || |    
T  68987 ttgcaattaggggtcatttaaaaattggtccctgtaatcactaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctcccca 69086  T
Q  590 attaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
     ||||||||||||||||||||||||||||||||| ||||| ||||||| || ||||||| |||||||    
T  69087 cttaatcactgccacgtcactaatttgatgacgttgcaataactgccatacatgaaattccaatttt 69153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 107; Significance: 3e-53; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 559 - 717
Target Start/End: Original strand, 14520 - 14678
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| ||| || |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||  |||||||||    
T  14520 ttaatcatttaaaattttgtcttttgaccaacttaatcactgccacgtcactaatttgatgacgtggcaatcactaccacacatgaaataccaattttgc 14619  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggtgaatttggaa 717  Q
    |||||||||||| |||  ||||||||||||||||||||||||||||||| || ||||||    
T  14620 ccttaagaagagaacattatattgaagaaagaattggaaacccaggggtaaaattggaa 14678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 591 - 656
Target Start/End: Complemental strand, 14734 - 14669
Alignment:
Q  591 ttaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    ||||||||||||| |||||||||||||||||||||||||||||| || || ||||||| |||||||    
T  14734 ttaatcactgccatgtcactaatttgatgacgtggcaatcactgtcatacatgaaattccaatttt 14669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 104; Significance: 2e-51; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 559 - 698
Target Start/End: Original strand, 37655 - 37793
Alignment:
Q  559 ttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgacgtggcaatcactgccacacgtgaaatttcaattttgc 658  Q
    ||||||||||||||||| |||||| |||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||| |||||||||    
T  37655 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacatcactaatttg-tgacgtggcaatcactgccacacatgaaattccaattttgc 37753  T
Q  659 ccttaagaagaggacaaaatattgaagaaagaattggaaa 698  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  37754 ccttaagaagagaacaaaatattgaagaaagaattggaaa 37793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 522 - 656
Target Start/End: Complemental strand, 37937 - 37803
Alignment:
Q  522 tgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtcactaatttgatgac 621  Q
    |||||| ||||||||||||| |||| || || | |  ||||||||||||||||| |||| |   || | |||||||||||||||||||||||||||||||    
T  37937 tgtaatcgctaatcctgacaatttacccttgtattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacgtcactaatttgatgac 37838  T
Q  622 gtggcaatcactgccacacgtgaaatttcaatttt 656  Q
    ||||||||||||| ||||| ||||||| |||||||    
T  37837 gtggcaatcactgtcacacatgaaattccaatttt 37803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 73; Significance: 6e-33; HSPs: 3)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 627 - 707
Target Start/End: Original strand, 21128 - 21208
Alignment:
Q  627 aatcactgccacacgtgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggt 707  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21128 aatcactgtcacacatgaaatttcaattttgcccttaagaagaggacaaaatattgaagaaagaattggaaacccaggggt 21208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 467 - 577
Target Start/End: Original strand, 21007 - 21118
Alignment:
Q  467 aaggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatca 565  Q
    |||||||| ||||||| |||| | ||||||||||||| ||||||||| ||||||||||||||||||||||||  || |||| || |||||||||||||||    
T  21007 aaggcttaatgatgtgattagtccttgcaattaggcgtcatttaaaaattcgtccctgtaattgctaatccttgcaatttagccttgcaattgttaatca 21106  T
Q  566 tttaaaatttgg 577  Q
    ||||||||||||    
T  21107 tttaaaatttgg 21118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 469 - 574
Target Start/End: Complemental strand, 21366 - 21260
Alignment:
Q  469 ggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatt 567  Q
    |||||| ||||||| |||| | ||||||||||  | | ||||||| |||||||||||||||||||||| || || ||||  | |||||||||||||||||    
T  21366 ggcttaatgatgtgattagtccttgcaattagaggtcgtttaaaaattcgtccctgtaattgctaatcatggcaatttagtcttgcaattgttaatcatt 21267  T
Q  568 taaaatt 574  Q
    |||||||    
T  21266 taaaatt 21260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 58; Significance: 5e-24; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 468 - 608
Target Start/End: Complemental strand, 222216 - 222075
Alignment:
Q  468 aggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcat 566  Q
    ||||||| |||||||||| | | ||||||||||||| ||||||||| || || | |||||| ||||||||||||| |||| || |||| |  ||||||||    
T  222216 aggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtacatgtaatcgctaatcctgacaatttacccttgcattgtttaatcat 222117  T
Q  567 ttaaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    ||||||||| |||||| |||||| ||||||||||||| ||||    
T  222116 ttaaaatttcgtcctttgaccaacttaatcactgccaagtca 222075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 491 - 608
Target Start/End: Original strand, 221813 - 221929
Alignment:
Q  491 ttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatttggtccttggaccaa 589  Q
    ||||||||||||| ||||||||| || |||  |||||| |||||||||| || |||| || |||| |  ||||||||||||||||| |||||| || |||    
T  221813 ttgcaattaggcgtcatttaaaaattagtct-tgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttga-caa 221910  T
Q  590 attaatcactgccacgtca 608  Q
     ||||||||||||||||||    
T  221911 cttaatcactgccacgtca 221929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 476 - 608
Target Start/End: Complemental strand, 12658 - 12525
Alignment:
Q  476 tgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatt 574  Q
    |||||||||| | | ||||||||||||| ||||||||| || ||||||||||| | |||||||| || |||| || |||| |  ||||||||||||||||    
T  12658 tgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgttaatcctggcaatttacccttgcattgtttaatcatttaaaatt 12559  T
Q  575 tggtccttggaccaaattaatcactgccacgtca 608  Q
    | || ||| |||| | ||||||||||||||||||    
T  12558 tcgttctttgacctacttaatcactgccacgtca 12525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 50; Significance: 3e-19; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 468 - 608
Target Start/End: Complemental strand, 11567 - 11426
Alignment:
Q  468 aggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcat 566  Q
    ||||||| ||||||||||   | ||||||||||||| ||||||||| || |||| |||||| | |||||||| || |||| || |||| |  ||||||||    
T  11567 aggcttaatgatgtgtttcatccttgcaattaggcgtcatttaaaaattagtccatgtaatcgttaatcctggcaatttacccttgcattgtttaatcat 11468  T
Q  567 ttaaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    ||||||||| ||| || |||||| ||||||||||||||||||    
T  11467 ttaaaatttcgtcttttgaccaacttaatcactgccacgtca 11426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 476 - 608
Target Start/End: Original strand, 11147 - 11280
Alignment:
Q  476 tgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcatttaaaatt 574  Q
    |||||||||| | | |||||||||| || ||| ||||| || ||| |||| || ||||||| || || |||| || |||| |  ||||||||||||||||    
T  11147 tgatgtgtttcgtcgttgcaattagtcgtcatctaaaaattagtctctgtgatcgctaatcttggcaatttacccttgcattgtttaatcatttaaaatt 11246  T
Q  575 tggtccttggaccaaattaatcactgccacgtca 608  Q
    | |||||| |||||| ||||||||||||| ||||    
T  11247 tcgtcctttgaccaacttaatcactgccaagtca 11280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771 (Bit Score: 46; Significance: 7e-17; HSPs: 1)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 468 - 600
Target Start/End: Original strand, 919 - 1052
Alignment:
Q  468 aggcttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcat 566  Q
    ||||||| |||||||||| | | ||||||||||||  ||||||||| || |||| |||||| ||||||| || || |||| || |||| |  ||||||||    
T  919 aggcttaatgatgtgtttcgtccttgcaattaggcatcatttaaaaattagtccatgtaatcgctaatcttggcaatttacccttgcattgtttaatcat 1018  T
Q  567 ttaaaatttggtccttggaccaaattaatcactg 600  Q
    ||||||||| |||||| |||||| ||||||||||    
T  1019 ttaaaatttcgtcctttgaccaacttaatcactg 1052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 471 - 606
Target Start/End: Original strand, 2395 - 2531
Alignment:
Q  471 cttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcattta 569  Q
    |||| |||||||||| | | |||||||||| || ||||||||| ||  |||||||||| |||||||||  || |||| || |||| |  |||||||||||    
T  2395 cttaatgatgtgtttcgtccttgcaattagacgtcatttaaaaattaatccctgtaatcgctaatcctagcaatttacccttgcattgtttaatcattta 2494  T
Q  570 aaatttggtccttggaccaaattaatcactgccacgt 606  Q
    |||||| |||||| |||||| ||||||||| ||||||    
T  2495 aaatttcgtcctttgaccaacttaatcactaccacgt 2531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 471 - 608
Target Start/End: Complemental strand, 12204 - 12066
Alignment:
Q  471 cttattgatgtgtttagcctttgcaattaggcggcatttaaaa-ttcgtccctgtaattgctaatcctgacattttaaccctgcaattgttaatcattta 569  Q
    |||| |||||||||| | | |||||||||  || ||||||||| ||  |||| ||||| |||||||||  || |||| || |||| |  |||||||||||    
T  12204 cttaatgatgtgtttcgtccttgcaattaaacgtcatttaaaaattaatcccagtaatcgctaatcctagcaatttacccttgcattgtttaatcattta 12105  T
Q  570 aaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    |||||| |||||| |||||| ||||||||||||||||||    
T  12104 aaatttcgtcctttgaccaacttaatcactgccacgtca 12066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0775 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0775
Description:

Target: scaffold0775; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 551 - 608
Target Start/End: Original strand, 5045 - 5102
Alignment:
Q  551 tgcaattgttaatcatttaaaatttggtccttggaccaaattaatcactgccacgtca 608  Q
    ||||||| ||||||||||||||||| |||||| |||| |||||||| |||||||||||    
T  5045 tgcaattattaatcatttaaaatttcgtcctttgacctaattaatcgctgccacgtca 5102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University