View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15436_low_7 (Length: 263)
Name: NF15436_low_7
Description: NF15436
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15436_low_7 |
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Alignment Details
Target: chr3 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 11 - 245
Target Start/End: Complemental strand, 45590156 - 45589922
Alignment:
| Q |
11 |
atgaatgaccttggtcgtcggagatggtggtggtggtcggagatgtttggacggcggcggaagaggtggagagagctttggtggtgagtcgtggaaatgg |
110 |
Q |
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| T |
45590156 |
atgaatgaccttggtcgtcggagatggtggtggtggtcggagatgtttggacggcggcggaagaggtggagagagctttggtggtgagtcgtggaaatgg |
45590057 |
T |
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| Q |
111 |
aaatttgtgggttttgtgaagtgaaggagaaaggaagcgcgaagaggaacatgtgggagtggaactgagtttgagagtttggaaggttgttctgttcaga |
210 |
Q |
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| T |
45590056 |
aaatttgtgggttttgtgaagtgaaggagaaaggaagcgcgaagaggaacatgtgggagttgaactgagtttgagagtttggaaggttgttctgttcaga |
45589957 |
T |
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| Q |
211 |
taaccatgtaaatccatgtctctcgccagtactgt |
245 |
Q |
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| T |
45589956 |
taaccatgtaaatccatgtctctcgccagtactgt |
45589922 |
T |
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