View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15438_high_6 (Length: 355)
Name: NF15438_high_6
Description: NF15438
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15438_high_6 |
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Alignment Details
Target: chr3 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 109 - 344
Target Start/End: Complemental strand, 48129674 - 48129439
Alignment:
| Q |
109 |
gagtatttggtatccaatactactttatgttttgttttctttgcattattacatgatcaatgttactatattgttctaacactatttttctacaatttcc |
208 |
Q |
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| T |
48129674 |
gagtatttggtatccaatactactttatgtttttttttctttgcattattacatgatcaatgttactatattgttctaacactatttttctacaatttcc |
48129575 |
T |
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| Q |
209 |
aggaatgtcctttccttgaagatatcatctctgaatgttgaggttcttcttccatagagttcacctaatatacttctcttttattttccgagtgccaaat |
308 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
48129574 |
aggaatgtcctttccttgaagatatcatctctgaatgttgaggttcttcttccatagagttcacctaatatacttctcttttatttttcgagtgccaaat |
48129475 |
T |
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| Q |
309 |
tctttaagatattccacatttcctcaacatgatgat |
344 |
Q |
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|||||||||||||||||||||||||||||| ||||| |
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| T |
48129474 |
tctttaagatattccacatttcctcaacatcatgat |
48129439 |
T |
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