View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15438_high_8 (Length: 301)
Name: NF15438_high_8
Description: NF15438
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15438_high_8 |
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Alignment Details
Target: chr2 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 13 - 284
Target Start/End: Complemental strand, 36352551 - 36352279
Alignment:
| Q |
13 |
aagaacaacaagaagaagtgatatcaagatactgttcaaggaatctttactataaatannnnnnnnnnaatgttttctagctattagcattatatattat |
112 |
Q |
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| T |
36352551 |
aagaacaacaagaagaagtgatatcaagatactgttcaaggaatctttactataaatattttttttttaatgttttctagctattagcattatatattat |
36352452 |
T |
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| Q |
113 |
aatatgtttatcttatctatcagcaggtttcagaaaatcagatatggttttattaatagccctctatttctatgtgtatgtctgatgacaagttgtttag |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36352451 |
aatatgtttatcttatctatcagcaggtttcagaaaatcagatatggttttattaatagccctctatttctatgtgtatgtctgatgacaagttgtttag |
36352352 |
T |
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| Q |
213 |
tg-tttgtgacttatactctaatttattataattcttatattattgtacgatgatatgagttagctgttgatc |
284 |
Q |
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|| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
36352351 |
tgttttgtgacttatactctaatttattataattcttatattattatacgatgatatgagttagctgttgatc |
36352279 |
T |
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