View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15439_high_17 (Length: 341)
Name: NF15439_high_17
Description: NF15439
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15439_high_17 |
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Alignment Details
Target: chr8 (Bit Score: 291; Significance: 1e-163; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 13 - 327
Target Start/End: Complemental strand, 41583698 - 41583384
Alignment:
| Q |
13 |
aatatgggtctatcagcattttatcccaaaatcaaactcgtttaactttaatctgtcaatattcctaatcatagcaatcaatatggaattagaaggatat |
112 |
Q |
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| T |
41583698 |
aatatgggtctatcagcattttatcccaaaatcgaactcgtttaactttaatctgtcaatattcctaatcataggaatcaatatggaattagaaggatat |
41583599 |
T |
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| Q |
113 |
acaatgaaagctggaaaggattaatcccaattacttttgtatttcctaagatttagacacggtctttacagactctaacccaaacataaaaggaatttat |
212 |
Q |
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| T |
41583598 |
acaatgaaagctggaaaggattaatcccaactacttttgtacttcataagatttagacacggtctttacaaactctaacccaaacataaaaggaatttat |
41583499 |
T |
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| Q |
213 |
ggacccatgtccagcttgtttgtgagagacaacacacccaaccgataaaaatcaaacgcccgcaagttattccaaagtagaaactagcattgtgaacaaa |
312 |
Q |
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| T |
41583498 |
ggacccatgtccagcttgtttgtgagagacaacacacccaaccgataaaaatcaaacgcccgcaagttattccaaagtagaaactagcattgtgaacaaa |
41583399 |
T |
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| Q |
313 |
aagcaacacaaaaaa |
327 |
Q |
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| T |
41583398 |
aagcaacacaaaaaa |
41583384 |
T |
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