View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF15439_low_20 (Length: 340)
Name: NF15439_low_20
Description: NF15439
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15439_low_20 |
 |  |
|
Alignment Details
Target: chr5 (Bit Score: 327; Significance: 0; HSPs: 13)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 327; E-Value: 0
Query Start/End: Original strand, 1 - 331
Target Start/End: Complemental strand, 37429108 - 37428778
Alignment:
| Q |
1 |
tctcaatgataactaactcacagggtcaattggtgagttctctactagttcattgaattatctattcctctcgaataacaagttacatggtccttttcca |
100 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37429108 |
tctcaatgataaccaactcacagggtcaattggtgagttctctactagttcattgaattatctattcctctcgaataacaagttacatggtccttttcca |
37429009 |
T |
 |
| Q |
101 |
aattcaatatttgaaatccaaaatcttacttacttagctttgtcatcaaccaacttgagaggtgtagtagacttttacaatttttctaagtttaaattac |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37429008 |
aattcaatatttgaaatccaaaatcttacttacttagctttgtcatcaaccaacttgagaggtgtagtagacttttacaatttttctaagtttaaattac |
37428909 |
T |
 |
| Q |
201 |
ttactttcctcgatctttcgcacaatagctttctttctatcaactttgacagtaatattgactccatctcacctagccttaatgcattatatttatcttc |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37428908 |
ttactttcctcgatctttcgcacaatagctttctttctatcaactttgacagtaatattgactccatctcacctagccttaatgcattatatttatcttc |
37428809 |
T |
 |
| Q |
301 |
tacaaatattaatagttttccaaaattctta |
331 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
37428808 |
tacaaatattaatagttttccaaaattctta |
37428778 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 68 - 330
Target Start/End: Original strand, 37413107 - 37413369
Alignment:
| Q |
68 |
ctctcgaataacaagttacatggtccttttccaaattcaatatttgaaatccaaaatcttacttacttagctttgtcatcaaccaacttgagaggtgtag |
167 |
Q |
| |
|
||||| ||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||||||| |||||||||||| ||||||| || | | |
|
|
| T |
37413107 |
ctctctaataacaagttacatggtcattttccaaattcaatatttaaattccaaaatcttacttacttaggtttgtcatcaacaaacttgaacggcgatg |
37413206 |
T |
 |
| Q |
168 |
tagacttttacaatttttctaagtttaaattacttactttcctcgatctttcgcacaatagctttctttctatcaactttgacagtaatattgactccat |
267 |
Q |
| |
|
| |||||| | | ||||| || ||| || ||| |||||||| |||||||| | ||| | ||||||||| ||||| ||| || | | |||||||||| |
|
|
| T |
37413207 |
tggactttcatcaattttcaaattttgaaaaactaactttccttgatctttcccgcaacaattttctttctgtcaacattggtagcagtgttgactccat |
37413306 |
T |
 |
| Q |
268 |
ctcacctagccttaatgcattatatttatcttctacaaatattaatagttttccaaaattctt |
330 |
Q |
| |
|
|||||| | |||| | |||||||||||||||||| ||||||||||||||||| || ||||| |
|
|
| T |
37413307 |
ctcacccaaccttgaatcattatatttatcttctagtaatattaatagttttcctaatttctt |
37413369 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 74 - 328
Target Start/End: Complemental strand, 37640175 - 37639921
Alignment:
| Q |
74 |
aataacaagttacatggtccttttccaaattcaatatttgaaatccaaaatcttacttacttagctttgtcatcaaccaacttgagaggtgtagtagact |
173 |
Q |
| |
|
|||||||| |||| |||| ||||||||||||||||||| || ||||||||||||||||||||| |||||||||||| |||||||| ||||| || || | |
|
|
| T |
37640175 |
aataacaacctacaaggtcattttccaaattcaatatttcaactccaaaatcttacttacttagatttgtcatcaacaaacttgagtggtgttgtggatt |
37640076 |
T |
 |
| Q |
174 |
tttacaatttttctaagtttaaattacttactttcctcgatctttcgcacaatagctttctttctatcaactttgacagtaatattgactccatctcacc |
273 |
Q |
| |
|
|| || | ||||| || || || ||| | || ||| |||||||| || ||||| ||||||||||||||| |||| || | | ||||||||||| ||| |
|
|
| T |
37640075 |
ttcaccaattttcaaaattaaacaaactaagttcccttgatctttcccataatagttttctttctatcaacattgatagcagtgctgactccatcttacc |
37639976 |
T |
 |
| Q |
274 |
tagccttaatgcattatatttatcttctacaaatattaatagttttccaaaattc |
328 |
Q |
| |
|
| |||| | ||||||||||||||||| | |||||||| |||||||| |||||| |
|
|
| T |
37639975 |
caaccttgaatcattatatttatcttctgctaatattaaaagttttcccaaattc |
37639921 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 68 - 328
Target Start/End: Original strand, 37400729 - 37400989
Alignment:
| Q |
68 |
ctctcgaataacaagttacatggtccttttccaaattcaatatttgaaatccaaaatcttacttacttagctttgtcatcaaccaacttgagaggtgtag |
167 |
Q |
| |
|
||||| |||||||| |||| |||| |||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||| ||||| | |
|
|
| T |
37400729 |
ctctctaataacaacctacaaggtcattttccaaattcaatatttgaactccaaaatcttacttacttagatttgtcatcaacaaacttgagtggtgttg |
37400828 |
T |
 |
| Q |
168 |
tagacttttacaatttttctaagtttaaattacttactttcctcgatctttcgcacaatagctttctttctatcaactttgacagtaatattgactccat |
267 |
Q |
| |
|
| || ||| || | ||||| || || || ||| || ||| ||||||| || ||||| ||||||||||||||| |||| || | | ||||||||| |
|
|
| T |
37400829 |
tggattttcaccaattttcaaaattaaacaaactatggtttctccatctttcccataatagttttctttctatcaacattgatagcagtgctgactccat |
37400928 |
T |
 |
| Q |
268 |
ctcacctagccttaatgcattatatttatcttctacaaatattaatagttttccaaaattc |
328 |
Q |
| |
|
|| ||| | |||| | |||| ||||||| ||| | ||||||||||||||||| |||||| |
|
|
| T |
37400929 |
cttacccaacctttttttattagatttatcctctgctaatattaatagttttcctaaattc |
37400989 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 68 - 328
Target Start/End: Complemental strand, 37711933 - 37711673
Alignment:
| Q |
68 |
ctctcgaataacaagttacatggtccttttccaaattcaatatttgaaatccaaaatcttacttacttagctttgtcatcaaccaacttgagaggtgtag |
167 |
Q |
| |
|
||||| |||||||| |||| |||| ||||||||||||||||||| || |||||||||||||||||||| |||||||||||| |||||||| ||||| | |
|
|
| T |
37711933 |
ctctctaataacaacctacaaggtcattttccaaattcaatatttcaactccaaaatcttacttacttatatttgtcatcaacaaacttgagtggtgttg |
37711834 |
T |
 |
| Q |
168 |
tagacttttacaatttttctaagtttaaattacttactttcctcgatctttcgcacaatagctttctttctatcaactttgacagtaatattgactccat |
267 |
Q |
| |
|
| || ||| || | ||||| || || || ||| | |||| |||||| ||||||| ||||||||||||||| |||| || | |||||||||||| |
|
|
| T |
37711833 |
tggattttcaccaattttcaaaattaaacaaactatggtatctcgttctttcacacaatacttttctttctatcaacattgatagcagtattgactccat |
37711734 |
T |
 |
| Q |
268 |
ctcacctagccttaatgcattatatttatcttctacaaatattaatagttttccaaaattc |
328 |
Q |
| |
|
| ||| | |||| | ||||| ||||||| ||| | ||||||||||||||||| |||||| |
|
|
| T |
37711733 |
catacccaaccttttttcattagatttatcctctgctaatattaatagttttcctaaattc |
37711673 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 84 - 328
Target Start/End: Complemental strand, 37594617 - 37594373
Alignment:
| Q |
84 |
tacatggtccttttccaaattcaatatttgaaatccaaaatcttacttacttagctttgtcatcaaccaacttgagaggtgtagtagacttttacaattt |
183 |
Q |
| |
|
||||||||| ||||||||||||||||||| || |||||||||| |||||||| |||||||||||||||||||||| ||||| || || ||| || | || |
|
|
| T |
37594617 |
tacatggtcattttccaaattcaatatttcaactccaaaatctatcttacttaactttgtcatcaaccaacttgagtggtgttgtcgattttcaccaatt |
37594518 |
T |
 |
| Q |
184 |
ttctaagtttaaattacttactttcctcgatctttcgcacaatagctttctttctatcaactttgacagtaatattgactccatctcacctagccttaat |
283 |
Q |
| |
|
||| || || || ||| | ||| ||||||| |||||||| |||||||||||||||||||| || | | ||||||||||| ||| | |||| | |
|
|
| T |
37594517 |
ttcaaaattaaacaaactagaatatctccatctttcacacaatagttttctttctatcaactttgatagcagtgctgactccatcttacccaaccttgtt |
37594418 |
T |
 |
| Q |
284 |
gcattatatttatcttctacaaatattaatagttttccaaaattc |
328 |
Q |
| |
|
| ||| |||||||| | | ||||||||||||||||| |||||| |
|
|
| T |
37594417 |
gacttagttttatcttattctaatattaatagttttcctaaattc |
37594373 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 68 - 328
Target Start/End: Original strand, 37392743 - 37393003
Alignment:
| Q |
68 |
ctctcgaataacaagttacatggtccttttccaaattcaatatttgaaatccaaaatcttacttacttagctttgtcatcaaccaacttgagaggtgtag |
167 |
Q |
| |
|
||||| |||||||| ||||||||| |||||||||||||||||||||| ||||||||||||| |||||| |||||| ||||| ||||| || ||||| | |
|
|
| T |
37392743 |
ctctcaaataacaacctacatggtcattttccaaattcaatatttgaactccaaaatcttaccaacttagatttgtcttcaacaaacttaagtggtgttg |
37392842 |
T |
 |
| Q |
168 |
tagacttttacaatttttctaagtttaaattacttactttcctcgatctttcgcacaatagctttctttctatcaactttgacagtaatattgactccat |
267 |
Q |
| |
|
| || ||| || | ||||| || || || ||| | ||| ||||||| |||||| | ||||||||||||||| |||| || | | ||||| |||| |
|
|
| T |
37392843 |
tggattttcaccaattttcaaaattaaacagactatggtatctctatctttcacacaatggttttctttctatcaacattgatagcagtgttgacaccat |
37392942 |
T |
 |
| Q |
268 |
ctcacctagccttaatgcattatatttatcttctacaaatattaatagttttccaaaattc |
328 |
Q |
| |
|
|| ||||| |||| | ||||| ||||||| | | | ||||||||||||||||| |||||| |
|
|
| T |
37392943 |
cttacctaaccttttttcattagatttatcatatgccaatattaatagttttcctaaattc |
37393003 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 68 - 328
Target Start/End: Complemental strand, 37436016 - 37435756
Alignment:
| Q |
68 |
ctctcgaataacaagttacatggtccttttccaaattcaatatttgaaatccaaaatcttacttacttagctttgtcatcaaccaacttgagaggtgtag |
167 |
Q |
| |
|
||||| |||||||| || | |||| |||| |||||||||||||| || |||||||||||||| | |||| |||||||||||| |||||||| ||||| | |
|
|
| T |
37436016 |
ctctcaaataacaacctagaaggtcatttttcaaattcaatatttcaactccaaaatcttactgaattagatttgtcatcaacaaacttgagtggtgttg |
37435917 |
T |
 |
| Q |
168 |
tagacttttacaatttttctaagtttaaattacttactttcctcgatctttcgcacaatagctttctttctatcaactttgacagtaatattgactccat |
267 |
Q |
| |
|
| || ||| || | ||||| || ||||| || | | ||||| |||||||||||||||| ||||||||||||||| | | || | | ||||||||| |
|
|
| T |
37435916 |
tggattttcaccaattttcaaaacttaaaaatctaattctcctcaatctttcgcacaatagttttctttctatcaacactaatagcagtgctgactccat |
37435817 |
T |
 |
| Q |
268 |
ctcacctagccttaatgcattatatttatcttctacaaatattaatagttttccaaaattc |
328 |
Q |
| |
|
|| ||| | |||| | ||| ||||||||||| | ||||||||||||||||| |||||| |
|
|
| T |
37435816 |
cttacccaaccttgagatgttagatttatcttctgctaatattaatagttttcctaaattc |
37435756 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 84 - 328
Target Start/End: Complemental strand, 37702961 - 37702717
Alignment:
| Q |
84 |
tacatggtccttttccaaattcaatatttgaaatccaaaatcttacttacttagctttgtcatcaaccaacttgagaggtgtagtagacttttacaattt |
183 |
Q |
| |
|
||||||||| ||||||||||||||||| |||| ||||||||||||| |||||| |||||| ||||| |||||||| ||||| || || ||| || | || |
|
|
| T |
37702961 |
tacatggtcattttccaaattcaatatatgaactccaaaatcttaccaacttagatttgtcgtcaacaaacttgagtggtgtcgtggattttcaccaatt |
37702862 |
T |
 |
| Q |
184 |
ttctaagtttaaattacttactttcctcgatctttcgcacaatagctttctttctatcaactttgacagtaatattgactccatctcacctagccttaat |
283 |
Q |
| |
|
||| || || ||| ||| | || |||| |||||| |||||||| ||| ||||||||||| |||| || | | ||||||||||| ||| | |||| | |
|
|
| T |
37702861 |
ttcaaaattaaaaaaactaaattccctcattctttcacacaatagttttatttctatcaacattgatagcagtgctgactccatcttacccaaccttgtt |
37702762 |
T |
 |
| Q |
284 |
gcattatatttatcttctacaaatattaatagttttccaaaattc |
328 |
Q |
| |
|
| ||| |||| || ||| | ||||||||||||||||| |||||| |
|
|
| T |
37702761 |
gacttagatttctcgtctgctaatattaatagttttcctaaattc |
37702717 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 331
Target Start/End: Original strand, 37382123 - 37382449
Alignment:
| Q |
5 |
aatgataactaactcacagggtcaattggtgagttctctactagttcattgaattatctattcctctcgaataacaagttacatggtccttttccaaatt |
104 |
Q |
| |
|
||||| ||| |||| ||||| || |||||||| ||||| ||| ||| |||| |||||||| ||||| |||||||| || | ||| ||||||||||| |
|
|
| T |
37382123 |
aatgacaaccaactaacaggttcgattggtgaattctcgacttattccttgatatatctatttctctctaataacaacataaaaggtgattttccaaatt |
37382222 |
T |
 |
| Q |
105 |
caatatttgaaatccaaaatcttacttacttagctttgtcatcaaccaacttgagaggtgtagtagacttttacaatttttctaagtttaaattacttac |
204 |
Q |
| |
|
|||||| | || | ||||||||| | |||||| |||||||||||||||||||| ||||| || |||||| || | ||||| || | ||| || |
|
|
| T |
37382223 |
caatatataaattacaaaatctttttgacttaggattgtcatcaaccaacttgagtggtgttgtggactttcaccaattttcaaattgtaagaagctatt |
37382322 |
T |
 |
| Q |
205 |
tttcctcgatctttcgcacaatagctttctttctatcaactttgacagtaatattgactccatctcacctagccttaatgcattatatttatcttctaca |
304 |
Q |
| |
|
|||||| |||||||| |||||||| || ||||||||||| |||| || | |||||||||||| ||| | |||| ||||||||||||||||| |
|
|
| T |
37382323 |
tttccttgatctttcccacaatagtttgctttctatcaatattgaaagcagagttgactccatcttacccaaccttgggatattatatttatcttctagt |
37382422 |
T |
 |
| Q |
305 |
aatattaatagttttccaaaattctta |
331 |
Q |
| |
|
||||||| ||||||||| ||||||||| |
|
|
| T |
37382423 |
aatattagtagttttcctaaattctta |
37382449 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 68 - 328
Target Start/End: Complemental strand, 37824204 - 37823944
Alignment:
| Q |
68 |
ctctcgaataacaagttacatggtccttttccaaattcaatatttgaaatccaaaatcttacttacttagctttgtcatcaaccaacttgagaggtgtag |
167 |
Q |
| |
|
||||| |||||||| ||| |||| ||||||||||||||||||| || ||||||||||||| | ||| |||||||||||| |||||||| ||||| | |
|
|
| T |
37824204 |
ctctctaataacaacctacgaggtcattttccaaattcaatatttcaactccaaaatcttaccgagttaattttgtcatcaacaaacttgagtggtgttg |
37824105 |
T |
 |
| Q |
168 |
tagacttttacaatttttctaagtttaaattacttactttcctcgatctttcgcacaatagctttctttctatcaactttgacagtaatattgactccat |
267 |
Q |
| |
|
| || ||| || | ||||| || || || ||| | || ||||| |||||| ||||||| |||||| |||||||| ||| || | | ||||||||| |
|
|
| T |
37824104 |
tggattttcaccaattttcaaaattaaacaaactaaattccctcgttctttcacacaatacttttcttgctatcaacactgatagcagtgctgactccat |
37824005 |
T |
 |
| Q |
268 |
ctcacctagccttaatgcattatatttatcttctacaaatattaatagttttccaaaattc |
328 |
Q |
| |
|
|| ||| | |||| | ||||| ||||||| ||| | ||||||||||||||||| |||||| |
|
|
| T |
37824004 |
cttacccaaccttttttcattagatttatcctctgctaatattaatagttttcctaaattc |
37823944 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 68 - 328
Target Start/End: Complemental strand, 37533409 - 37533149
Alignment:
| Q |
68 |
ctctcgaataacaagttacatggtccttttccaaattcaatatttgaaatccaaaatcttacttacttagctttgtcatcaaccaacttgagaggtgtag |
167 |
Q |
| |
|
||||| |||||||| |||| |||| ||||||||||||||||||| || ||||||||||||| ||||| ||||||||| || ||||| || ||||| | |
|
|
| T |
37533409 |
ctctctaataacaacctacaaggtcattttccaaattcaatatttcaactccaaaatcttaccgacttatatttgtcatccacaaacttaagtggtgttg |
37533310 |
T |
 |
| Q |
168 |
tagacttttacaatttttctaagtttaaattacttactttcctcgatctttcgcacaatagctttctttctatcaactttgacagtaatattgactccat |
267 |
Q |
| |
|
| || ||| || | ||||| || || || ||| || ||| |||||||| || ||||| ||||||||||||||| || | || ||| |||||||||| |
|
|
| T |
37533309 |
tggattttcaccaattttcaaaattaaacaaactaggttcccttgatctttcccataatagttttctttctatcaacattaatagcaatgttgactccat |
37533210 |
T |
 |
| Q |
268 |
ctcacctagccttaatgcattatatttatcttctacaaatattaatagttttccaaaattc |
328 |
Q |
| |
|
|| ||| | |||| || ||| | |||||| | | ||||||||||||||||| |||||| |
|
|
| T |
37533209 |
cttacccaaccttgttgacttagaattatctaatgctaatattaatagttttcctaaattc |
37533149 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 68 - 165
Target Start/End: Complemental strand, 37697030 - 37696933
Alignment:
| Q |
68 |
ctctcgaataacaagttacatggtccttttccaaattcaatatttgaaatccaaaatcttacttacttagctttgtcatcaaccaacttgagaggtgt |
165 |
Q |
| |
|
||||| |||||||| |||| |||| ||||||||||||||||||| || ||||||| ||||| | ||| ||||||||||||||||||||| ||||| |
|
|
| T |
37697030 |
ctctctaataacaacctacaaggtcattttccaaattcaatatttcaactccaaaaccttaccgagttatatttgtcatcaaccaacttgagtggtgt |
37696933 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 68 - 249
Target Start/End: Complemental strand, 14553419 - 14553238
Alignment:
| Q |
68 |
ctctcgaataacaagttacatggtccttttccaaattcaatatttgaaatccaaaatcttacttacttagctttgtcatcaaccaacttgagaggtgtag |
167 |
Q |
| |
|
||||| |||||||| |||| |||| |||||||||||||||||||||| ||||||||||||| ||||| ||||||||| || |||||||| ||||| | |
|
|
| T |
14553419 |
ctctcaaataacaacctacaaggtcattttccaaattcaatatttgaactccaaaatcttaccgacttatatttgtcatccacaaacttgagtggtgttg |
14553320 |
T |
 |
| Q |
168 |
tagacttttacaatttttctaagtttaaattacttactttcctcgatctttcgcacaatagctttctttctatcaactttga |
249 |
Q |
| |
|
| || ||| || | ||||| || || ||| ||| | || |||||||||||| |||||||| ||| ||||||||||| |||| |
|
|
| T |
14553319 |
tggattttcaccaattttcaaaattaaaaaaactaaattccctcgatctttcacacaatagttttatttctatcaacattga |
14553238 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 68 - 328
Target Start/End: Original strand, 16842727 - 16842987
Alignment:
| Q |
68 |
ctctcgaataacaagttacatggtccttttccaaattcaatatttgaaatccaaaatcttacttacttagctttgtcatcaaccaacttgagaggtgtag |
167 |
Q |
| |
|
||||| |||||||| |||| || | |||||||||||||||||||||| ||||||||||||| | ||| ||| |||||||| |||||||| ||||| | |
|
|
| T |
16842727 |
ctctctaataacaacctacaaggccattttccaaattcaatatttgaactccaaaatcttaccgccctagatttatcatcaacaaacttgagtggtgttg |
16842826 |
T |
 |
| Q |
168 |
tagacttttacaatttttctaagtttaaattacttactttcctcgatctttcgcacaatagctttctttctatcaactttgacagtaatattgactccat |
267 |
Q |
| |
|
| || ||| || | ||||| || || || ||| | ||||||||||| ||||||| ||||||||||||||| ||| || | | ||||||||| |
|
|
| T |
16842827 |
tggattttcaccaattttcaaaattaaacaaactagggtatctcgatctttcacacaatacttttctttctatcaacactgatagcattgctgactccat |
16842926 |
T |
 |
| Q |
268 |
ctcacctagccttaatgcattatatttatcttctacaaatattaatagttttccaaaattc |
328 |
Q |
| |
|
|| ||| | |||| | ||||| ||||||||| | | ||||||||||||||||| |||||| |
|
|
| T |
16842927 |
cttacccaaccttttttcattagatttatcttatgctaatattaatagttttcctaaattc |
16842987 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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