View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15439_low_6 (Length: 635)
Name: NF15439_low_6
Description: NF15439
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15439_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 104; Significance: 2e-51; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 466 - 627
Target Start/End: Complemental strand, 31637300 - 31637145
Alignment:
| Q |
466 |
accgacttattt-ccaatgttatccttgcacttcagttcctacatgaataaattattgttattttatttccattgtacacgtttattttatgaaatgaaa |
564 |
Q |
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| T |
31637300 |
accgacttattttccaatgttatccttgcacttcagttcctacat-------ttattgttattttatttccattgtacacgtttattttatgaaatgaaa |
31637208 |
T |
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| Q |
565 |
atatacaatagagagatannnnnnncccaaaaaacatgtgaagtttcggaattacatttgtct |
627 |
Q |
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|||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |
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| T |
31637207 |
atatacaatagagagatatttttttcccaaaaatcatgtgaagtttcggaattacatttgtct |
31637145 |
T |
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