View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15441_low_1 (Length: 641)

Name: NF15441_low_1
Description: NF15441
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15441_low_1
NF15441_low_1
[»] chr4 (57 HSPs)
chr4 (19-205)||(26521351-26521536)
chr4 (507-640)||(26520915-26521048)
chr4 (23-205)||(3329858-3330040)
chr4 (23-201)||(34107759-34107937)
chr4 (23-204)||(39001260-39001441)
chr4 (270-442)||(26521113-26521286)
chr4 (23-205)||(50000989-50001171)
chr4 (23-205)||(4419126-4419307)
chr4 (23-205)||(53619448-53619630)
chr4 (24-201)||(600756-600933)
chr4 (23-142)||(56462169-56462288)
chr4 (36-201)||(16955326-16955491)
chr4 (23-156)||(53170423-53170557)
chr4 (27-201)||(42455674-42455848)
chr4 (23-152)||(38535632-38535760)
chr4 (38-205)||(23255575-23255742)
chr4 (27-158)||(25504204-25504335)
chr4 (23-201)||(30940801-30940973)
chr4 (32-154)||(7536643-7536765)
chr4 (51-205)||(55933551-55933705)
chr4 (69-187)||(23242780-23242898)
chr4 (51-192)||(50464387-50464528)
chr4 (507-610)||(30378405-30378508)
chr4 (23-205)||(132247-132429)
chr4 (51-193)||(9601084-9601221)
chr4 (98-201)||(23604956-23605059)
chr4 (99-205)||(31846965-31847071)
chr4 (69-201)||(8738071-8738203)
chr4 (51-153)||(34213534-34213635)
chr4 (59-201)||(45661557-45661699)
chr4 (23-187)||(50463009-50463170)
chr4 (72-140)||(18981651-18981718)
chr4 (23-159)||(46440952-46441088)
chr4 (90-193)||(50442609-50442712)
chr4 (23-154)||(54190914-54191045)
chr4 (27-174)||(49354133-49354284)
chr4 (27-141)||(53098347-53098461)
chr4 (132-205)||(12917911-12917984)
chr4 (57-154)||(48657012-48657109)
chr4 (23-84)||(50483259-50483320)
chr4 (129-201)||(40392723-40392795)
chr4 (45-136)||(46391399-46391488)
chr4 (38-205)||(6865898-6866063)
chr4 (23-174)||(49344202-49344357)
chr4 (56-187)||(23233211-23233340)
chr4 (119-205)||(12053329-12053415)
chr4 (87-160)||(22449813-22449885)
chr4 (34-127)||(28739845-28739938)
chr4 (105-194)||(47585153-47585242)
chr4 (108-197)||(2852305-2852394)
chr4 (91-147)||(40005289-40005345)
chr4 (148-205)||(25931973-25932030)
chr4 (23-80)||(31847074-31847131)
chr4 (145-205)||(41372253-41372313)
chr4 (25-117)||(45386126-45386218)
chr4 (109-201)||(45760940-45761032)
chr4 (105-153)||(52022042-52022090)
[»] chr8 (35 HSPs)
chr8 (34-202)||(38815159-38815327)
chr8 (23-201)||(22589400-22589577)
chr8 (25-201)||(18804479-18804654)
chr8 (27-201)||(24124894-24125068)
chr8 (25-163)||(3187874-3188011)
chr8 (33-187)||(37514101-37514255)
chr8 (22-155)||(4699783-4699915)
chr8 (23-167)||(6592476-6592619)
chr8 (74-205)||(42659089-42659220)
chr8 (23-136)||(3821155-3821268)
chr8 (23-205)||(39434531-39434711)
chr8 (23-167)||(6618185-6618328)
chr8 (27-153)||(25021881-25022007)
chr8 (23-201)||(43823856-43824033)
chr8 (42-201)||(4073400-4073559)
chr8 (23-154)||(28196105-28196236)
chr8 (45-153)||(9259377-9259485)
chr8 (23-145)||(3863236-3863361)
chr8 (51-201)||(5329693-5329843)
chr8 (108-201)||(500108-500201)
chr8 (91-164)||(8882247-8882320)
chr8 (82-152)||(24451036-24451105)
chr8 (23-109)||(35740049-35740135)
chr8 (23-135)||(3825567-3825679)
chr8 (44-154)||(8540461-8540574)
chr8 (34-120)||(39671246-39671332)
chr8 (120-201)||(18596759-18596840)
chr8 (33-98)||(40223476-40223541)
chr8 (34-142)||(121795-121903)
chr8 (45-141)||(8115738-8115834)
chr8 (87-154)||(4066758-4066825)
chr8 (109-191)||(8227984-8228066)
chr8 (91-147)||(6792189-6792245)
chr8 (111-156)||(24320248-24320293)
chr8 (105-201)||(11611279-11611375)
[»] scaffold0009 (1 HSPs)
scaffold0009 (23-201)||(102972-103150)
[»] chr7 (46 HSPs)
chr7 (23-201)||(21326901-21327079)
chr7 (23-194)||(45613905-45614076)
chr7 (23-194)||(19277164-19277337)
chr7 (28-201)||(4501125-4501298)
chr7 (23-154)||(48539094-48539225)
chr7 (23-205)||(28517350-28517532)
chr7 (35-202)||(5825138-5825305)
chr7 (23-154)||(24527502-24527633)
chr7 (23-153)||(27521385-27521515)
chr7 (25-194)||(982822-982991)
chr7 (24-194)||(22197860-22198029)
chr7 (24-194)||(22239792-22239961)
chr7 (23-205)||(40726543-40726725)
chr7 (27-153)||(43856788-43856914)
chr7 (23-136)||(10905049-10905162)
chr7 (73-205)||(45003010-45003142)
chr7 (23-154)||(30216121-30216252)
chr7 (31-201)||(25187002-25187172)
chr7 (20-153)||(41117830-41117963)
chr7 (25-154)||(42295249-42295378)
chr7 (45-192)||(34772657-34772804)
chr7 (44-154)||(5972300-5972410)
chr7 (23-171)||(23792908-23793056)
chr7 (92-201)||(45974731-45974840)
chr7 (34-201)||(9281205-9281377)
chr7 (34-201)||(9292176-9292348)
chr7 (44-155)||(23037457-23037568)
chr7 (88-154)||(27027758-27027824)
chr7 (23-155)||(32584512-32584645)
chr7 (34-153)||(5714954-5715072)
chr7 (94-157)||(2904290-2904353)
chr7 (71-154)||(43333941-43334024)
chr7 (80-162)||(38839231-38839313)
chr7 (133-205)||(38766186-38766258)
chr7 (100-187)||(29054729-29054816)
chr7 (27-130)||(36558935-36559037)
chr7 (51-125)||(44525927-44526001)
chr7 (38-127)||(6635041-6635130)
chr7 (28-84)||(2904348-2904404)
chr7 (69-201)||(31889588-31889720)
chr7 (115-194)||(32336285-32336359)
chr7 (74-117)||(38766259-38766302)
chr7 (95-154)||(41071736-41071795)
chr7 (143-205)||(38832164-38832226)
chr7 (34-83)||(23890253-23890302)
chr7 (173-201)||(2520934-2520962)
[»] chr3 (41 HSPs)
chr3 (23-205)||(39583292-39583474)
chr3 (23-201)||(32546661-32546839)
chr3 (23-201)||(53785575-53785753)
chr3 (23-205)||(26772620-26772802)
chr3 (23-201)||(44198633-44198811)
chr3 (23-201)||(52741575-52741753)
chr3 (33-190)||(26856835-26856992)
chr3 (43-201)||(44699-44860)
chr3 (23-201)||(37133062-37133240)
chr3 (23-201)||(38670943-38671121)
chr3 (23-154)||(3443375-3443506)
chr3 (23-154)||(38145969-38146100)
chr3 (23-205)||(4472924-4473105)
chr3 (32-201)||(21552530-21552703)
chr3 (55-201)||(4763888-4764033)
chr3 (23-161)||(38978862-38979000)
chr3 (23-152)||(5338561-5338687)
chr3 (23-155)||(13582422-13582554)
chr3 (19-205)||(25324892-25325077)
chr3 (52-170)||(52411983-52412101)
chr3 (23-201)||(49017833-49018007)
chr3 (27-150)||(54508451-54508574)
chr3 (90-187)||(4669793-4669890)
chr3 (27-154)||(37992246-37992372)
chr3 (59-161)||(7257655-7257757)
chr3 (23-201)||(25094635-25094809)
chr3 (27-154)||(7502079-7502204)
chr3 (69-201)||(3643019-3643149)
chr3 (58-201)||(46940871-46941014)
chr3 (23-153)||(7900772-7900902)
chr3 (87-174)||(26393813-26393900)
chr3 (53-174)||(42205960-42206081)
chr3 (37-120)||(51234563-51234646)
chr3 (63-205)||(8592003-8592144)
chr3 (60-154)||(32690966-32691060)
chr3 (105-154)||(26276528-26276577)
chr3 (27-67)||(3376808-3376848)
chr3 (23-127)||(43123085-43123189)
chr3 (96-164)||(53502590-53502658)
chr3 (100-155)||(50446177-50446232)
chr3 (102-163)||(3376880-3376941)
[»] chr1 (41 HSPs)
chr1 (32-201)||(21472869-21473038)
chr1 (23-201)||(22346761-22346939)
chr1 (31-201)||(24177582-24177752)
chr1 (23-201)||(28041190-28041368)
chr1 (23-153)||(34644480-34644610)
chr1 (25-194)||(2898575-2898744)
chr1 (23-201)||(20259860-20260038)
chr1 (23-156)||(45659711-45659842)
chr1 (70-201)||(868513-868642)
chr1 (105-205)||(5453957-5454057)
chr1 (23-201)||(7213109-7213294)
chr1 (90-201)||(30688423-30688534)
chr1 (34-164)||(2764382-2764512)
chr1 (23-201)||(31737386-31737563)
chr1 (95-194)||(4611062-4611161)
chr1 (25-131)||(38731545-38731651)
chr1 (25-202)||(47459548-47459724)
chr1 (115-201)||(1114023-1114109)
chr1 (23-141)||(4862052-4862170)
chr1 (23-107)||(29169856-29169940)
chr1 (51-201)||(35387747-35387890)
chr1 (47-205)||(48841169-48841327)
chr1 (120-201)||(19035345-19035426)
chr1 (37-129)||(18616230-18616322)
chr1 (106-201)||(28493477-28493572)
chr1 (93-154)||(45835319-45835380)
chr1 (25-201)||(50161485-50161665)
chr1 (88-164)||(21934280-21934357)
chr1 (98-205)||(6790800-6790908)
chr1 (98-201)||(29170322-29170425)
chr1 (33-128)||(50314697-50314791)
chr1 (170-205)||(6590840-6590875)
chr1 (90-153)||(13181118-13181181)
chr1 (74-201)||(40515989-40516115)
chr1 (23-113)||(37932280-37932370)
chr1 (100-158)||(51067195-51067252)
chr1 (112-164)||(7483787-7483839)
chr1 (69-141)||(11128363-11128435)
chr1 (23-67)||(16500034-16500078)
chr1 (92-201)||(25375961-25376072)
chr1 (23-95)||(42919832-42919904)
[»] chr2 (42 HSPs)
chr2 (23-201)||(13413217-13413395)
chr2 (23-201)||(41867971-41868148)
chr2 (23-201)||(17344504-17344682)
chr2 (23-201)||(4413129-4413307)
chr2 (23-194)||(9685478-9685649)
chr2 (37-201)||(18745031-18745195)
chr2 (23-205)||(28224862-28225044)
chr2 (23-171)||(7760908-7761056)
chr2 (23-135)||(44686348-44686460)
chr2 (23-154)||(19161846-19161977)
chr2 (34-205)||(5532284-5532453)
chr2 (74-205)||(27494173-27494304)
chr2 (50-156)||(27502273-27502379)
chr2 (33-154)||(3825639-3825760)
chr2 (44-153)||(16351928-16352037)
chr2 (122-201)||(3208406-3208485)
chr2 (31-155)||(2886686-2886810)
chr2 (62-194)||(23485038-23485171)
chr2 (23-155)||(13147163-13147295)
chr2 (23-110)||(20142788-20142875)
chr2 (44-155)||(32029170-32029281)
chr2 (57-155)||(44684955-44685053)
chr2 (34-109)||(34814892-34814967)
chr2 (50-154)||(11921300-11921398)
chr2 (23-126)||(33612610-33612711)
chr2 (121-201)||(42122683-42122763)
chr2 (34-153)||(44720236-44720355)
chr2 (58-156)||(1296175-1296273)
chr2 (99-153)||(15515286-15515340)
chr2 (27-153)||(8036549-8036677)
chr2 (78-142)||(20142872-20142935)
chr2 (114-201)||(2626001-2626088)
chr2 (126-201)||(30602355-30602430)
chr2 (130-205)||(41702134-41702209)
chr2 (73-150)||(24765178-24765255)
chr2 (62-154)||(3262244-3262336)
chr2 (134-194)||(20143119-20143179)
chr2 (33-141)||(29808001-29808109)
chr2 (72-167)||(10296638-10296733)
chr2 (108-153)||(2888404-2888449)
chr2 (23-120)||(2888463-2888560)
chr2 (73-150)||(24762900-24762977)
[»] chr6 (25 HSPs)
chr6 (23-205)||(17249368-17249550)
chr6 (31-194)||(959454-959616)
chr6 (23-205)||(33220774-33220956)
chr6 (75-201)||(3137362-3137488)
chr6 (23-152)||(4206659-4206788)
chr6 (23-194)||(34304369-34304540)
chr6 (23-152)||(4165985-4166114)
chr6 (48-156)||(32115629-32115737)
chr6 (34-141)||(29338153-29338260)
chr6 (51-201)||(28009078-28009228)
chr6 (34-155)||(34554351-34554471)
chr6 (33-201)||(28625797-28625964)
chr6 (90-201)||(34168787-34168897)
chr6 (23-102)||(45740-45819)
chr6 (22-205)||(357779-357961)
chr6 (107-201)||(7749347-7749441)
chr6 (90-205)||(28543259-28543374)
chr6 (27-142)||(24016262-24016377)
chr6 (27-154)||(26225646-26225773)
chr6 (34-154)||(13398256-13398376)
chr6 (23-99)||(34415404-34415480)
chr6 (23-141)||(3714843-3714961)
chr6 (52-135)||(7200627-7200710)
chr6 (133-194)||(749501-749562)
chr6 (97-141)||(30514135-30514179)
[»] chr5 (36 HSPs)
chr5 (23-205)||(35310310-35310492)
chr5 (23-205)||(430464-430646)
chr5 (38-153)||(22188733-22188848)
chr5 (23-201)||(13166973-13167151)
chr5 (23-201)||(42921564-42921741)
chr5 (33-153)||(32269870-32269990)
chr5 (59-187)||(2566194-2566322)
chr5 (23-155)||(37873701-37873833)
chr5 (34-205)||(25663106-25663277)
chr5 (41-197)||(34335207-34335363)
chr5 (23-194)||(15292089-15292259)
chr5 (71-202)||(23023460-23023591)
chr5 (23-205)||(27336557-27336737)
chr5 (34-139)||(38875567-38875671)
chr5 (23-205)||(33692118-33692297)
chr5 (71-201)||(24113441-24113571)
chr5 (32-142)||(26212655-26212765)
chr5 (23-201)||(15832928-15833103)
chr5 (35-154)||(14423600-14423714)
chr5 (33-142)||(15809974-15810081)
chr5 (51-153)||(23423962-23424064)
chr5 (87-188)||(15506742-15506843)
chr5 (37-159)||(27294346-27294468)
chr5 (23-146)||(7716105-7716225)
chr5 (59-152)||(22819737-22819830)
chr5 (120-188)||(11005757-11005825)
chr5 (23-155)||(26010277-26010408)
chr5 (45-153)||(8100468-8100574)
chr5 (53-141)||(19260230-19260318)
chr5 (103-155)||(34475953-34476005)
chr5 (31-102)||(41343509-41343581)
chr5 (124-205)||(2917524-2917606)
chr5 (69-135)||(3114249-3114315)
chr5 (115-201)||(12033297-12033383)
chr5 (52-141)||(27355717-27355806)
chr5 (69-201)||(16017039-16017171)
[»] scaffold0148 (1 HSPs)
scaffold0148 (31-201)||(33116-33286)
[»] scaffold0490 (1 HSPs)
scaffold0490 (23-122)||(6279-6378)
[»] scaffold1768 (1 HSPs)
scaffold1768 (23-201)||(247-425)
[»] scaffold0470 (1 HSPs)
scaffold0470 (23-167)||(7503-7646)
[»] scaffold0119 (1 HSPs)
scaffold0119 (23-156)||(16017-16149)
[»] scaffold0110 (1 HSPs)
scaffold0110 (74-205)||(47634-47765)
[»] scaffold0031 (1 HSPs)
scaffold0031 (63-195)||(49287-49419)
[»] scaffold0406 (1 HSPs)
scaffold0406 (118-201)||(6754-6837)
[»] scaffold0309 (1 HSPs)
scaffold0309 (115-201)||(5190-5276)
[»] scaffold0514 (1 HSPs)
scaffold0514 (91-147)||(4378-4434)
[»] scaffold0186 (1 HSPs)
scaffold0186 (23-99)||(10329-10404)
[»] scaffold0361 (1 HSPs)
scaffold0361 (98-193)||(17415-17510)
[»] scaffold0013 (1 HSPs)
scaffold0013 (106-171)||(52663-52727)
[»] scaffold0224 (1 HSPs)
scaffold0224 (23-95)||(18427-18499)


Alignment Details
Target: chr4 (Bit Score: 159; Significance: 2e-84; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 19 - 205
Target Start/End: Complemental strand, 26521536 - 26521351
Alignment:
Q  19 ttcaacacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatg 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| |||    
T  26521536 ttcaacacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtatcctaggcccatg-atg 26521438  T
Q  119 ttgtgtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaagtaa 205  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||    
T  26521437 ttgtgtttacgaggattggttttgtcatccaaaaaggtttagcggcacagctttttgtccgcttgccttctatccatgtgtaagtaa 26521351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 507 - 640
Target Start/End: Complemental strand, 26521048 - 26520915
Alignment:
Q  507 gtttagacaaattctacttcttagccaaagaacacggttaccgctgtagagcatcatggaaactcattcaactcaattcaaagttccatttcctcgaatc 606  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26521048 gtttacacaaattctacttcttagccaaagaacacggttaccgctgtagagcatcatggaaactcattcaactcaattcaaagttccatttcctcgaatc 26520949  T
Q  607 ctcatgcgctgtcctcgacctctgtgctcctcct 640  Q
    |||||||||||||||| ||||||| ||| |||||    
T  26520948 ctcatgcgctgtcctcaacctctgcgctgctcct 26520915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 23 - 205
Target Start/End: Complemental strand, 3330040 - 3329858
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    |||||||||| ||||||||| ||||||| |||||||||||||||| ||| |||||||| |||| ||||||||| |||||||||||||||||||||| |||    
T  3330040 acacttttggcttcctagcatcagaggcagttgaccttctacatagagtccaaagggttatgcatagcaatgttatgtctcctaggtccatgaatgctgt 3329941  T
Q  123 gtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaagtaa 205  Q
    |||||||| ||||||||||| ||||||||||||| || |||| || ||| ||| |||||||||| ||||||| ||||||||||    
T  3329940 gtttacgatgattggttttgccatccaaaaaggtctagcggcgcagcttgttgcccgcttgcctcctattcacgtgtaagtaa 3329858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 23 - 201
Target Start/End: Original strand, 34107759 - 34107937
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    ||||||| | ||||||||||||||||||||||||||||||||||| ||||||||  ||||||| || |||||| ||||||||||| ||||||||||||||    
T  34107759 acactttcgatttcctagcaccagaggctgttgaccttctacatagagttcaaaaagtcatgcataacaatgttatgtctcctagatccatgaatgttgt 34107858  T
Q  123 gtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaa 201  Q
    ||| ||||||||||||||||||||||||||| ||||||||||||| ||| ||| || ||||  ||||||||| ||||||    
T  34107859 gttcacgaggattggttttgtcatccaaaaaagtttaacggcacagcttgttgcccacttgttttctattcaagtgtaa 34107937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 23 - 204
Target Start/End: Complemental strand, 39001441 - 39001260
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    |||||||||| ||||||| | ||||||| |||||||||||||||| ||| |||||| | |||| || ||||||  |||||||||||||||||||||||||    
T  39001441 acacttttggcttcctaggatcagaggcagttgaccttctacatagagtccaaaggattatgcataacaatgttgtgtctcctaggtccatgaatgttgt 39001342  T
Q  123 gtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaagta 204  Q
    |||||||||||||||||||||||||||||||||| || |||| ||  || ||| |||||||||| |||||||||||||||||    
T  39001341 gtttacgaggattggttttgtcatccaaaaaggtctagcggcgcagtttgttgcccgcttgcctcctattcatgtgtaagta 39001260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 270 - 442
Target Start/End: Complemental strand, 26521286 - 26521113
Alignment:
Q  270 aaaacttacaccaaaagatggtaaaagagggtgagtttttcttgtttgatttcgtaatttaatttaatagcttatnnnnnnnnnnnnnnnnnnnnn-tta 368  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||                      |||    
T  26521286 aaaacttacactaaaagatggtaaaagagggtgagtttttcttgtttgatttcgtaatttaatttaatatcttataaaaaaaatactataaataaaatta 26521187  T
Q  369 tagctttatcaaatttacatacttggagagcacgttacaataaacctctacgcacatatcacatcgtcaccctc 442  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26521186 tagctttatcaaatttacatacttggagagcacgttacaataaacctctacgcacatatcacatcgtcaccctc 26521113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 23 - 205
Target Start/End: Original strand, 50000989 - 50001171
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    |||||||||| || |||||| ||||||| |||||||||||||||| ||| |||||||| |||| ||||||||| ||||||||||| ||||| ||||||||    
T  50000989 acacttttggctttctagcatcagaggcagttgaccttctacatatagtccaaagggttatgcatagcaatgttatgtctcctagatccataaatgttgt 50001088  T
Q  123 gtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaagtaa 205  Q
    |||||||| ||||| ||||| ||||||||||| | || |||| || ||| ||| |||||||||| ||||||||||||||||||    
T  50001089 gtttacgaagattgattttgccatccaaaaagatctagcggcgcagcttgttgcccgcttgcctcctattcatgtgtaagtaa 50001171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 23 - 205
Target Start/End: Complemental strand, 4419307 - 4419126
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    ||||||| || ||| ||||| |||||| ||||||||||||||||| |||||||||||| |||| || |||||| ||||||||||||||||||||||||||    
T  4419307 acactttcggcttcgtagcatcagaggttgttgaccttctacatagagttcaaagggttatgcataacaatgttatgtctcctaggtccatgaatgttgt 4419208  T
Q  123 gtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaagtaa 205  Q
    |||||||| ||||||||||| ||||||||||  | || |||| || ||| ||| |||||||||| ||||||||||| ||||||    
T  4419207 gtttacgatgattggttttgccatccaaaaa-atctagcggcgcagcttgttgcccgcttgcctcctattcatgtgcaagtaa 4419126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 23 - 205
Target Start/End: Complemental strand, 53619630 - 53619448
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    |||||||||  ||||||||| ||||||| |||||||||||||||| |||  ||||||| |||| || |||||| ||||||| ||||||||||||||||||    
T  53619630 acacttttgacttcctagcatcagaggcagttgaccttctacatagagtctaaagggttatgcataacaatgttatgtctcttaggtccatgaatgttgt 53619531  T
Q  123 gtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaagtaa 205  Q
    ||||||||| |||||||||| ||||||||||||| || |||| || ||| ||| |  ||| ||| ||||||||||||||||||    
T  53619530 gtttacgagaattggttttgccatccaaaaaggtctagcggcgcagcttgttgcctacttacctcctattcatgtgtaagtaa 53619448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 24 - 201
Target Start/End: Original strand, 600756 - 600933
Alignment:
Q  24 cacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtg 123  Q
    |||||| ||||||||| ||||||||| ||||||||||||||||| |||||||| |||||||  || | |||||||||||||||||||||| |||| ||||    
T  600756 cactttcggtttcctaacaccagaggttgttgaccttctacatagagttcaaaaggtcatgtataactatgtcatgtctcctaggtccattaatgctgtg 600855  T
Q  124 tttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaa 201  Q
    ||||||| |||| |||||| |||||||||| || || || |  | ||| |||||||||||||||||||||| ||||||    
T  600856 tttacgatgattagttttgccatccaaaaatgtatagcgacgtagcttgttgtccgcttgccttctattcaagtgtaa 600933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 23 - 142
Target Start/End: Original strand, 56462169 - 56462288
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| |||||| |  ||||||||||||||||| |||||| ||||||||    
T  56462169 acacttttggtttcctagcaccagaggttgttgaccttctacatagagttcaaaggatcatgcatgacaatgtcatgtctcctaagtccataaatgttgt 56462268  T
Q  123 gtttacgaggattggttttg 142  Q
    ||||||||| ||||||||||    
T  56462269 gtttacgagaattggttttg 56462288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 36 - 201
Target Start/End: Complemental strand, 16955491 - 16955326
Alignment:
Q  36 cctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggatt 135  Q
    |||||||||||||| || |||||||||||||| |||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  16955491 cctagcaccagaggttgctgaccttctacatagagttcaaaaggtcatgcatagcaatgtcatgtctcctaggcccatgaatgttgtgtttacgaggatt 16955392  T
Q  136 ggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaa 201  Q
    | ||| | |||| |||||| |   ||| | ||  || |||||||||||||||||| ||| ||||||    
T  16955391 gatttggccatcaaaaaagatccgacgacgcagtttgttgtccgcttgccttctactcaagtgtaa 16955326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 23 - 156
Target Start/End: Complemental strand, 53170557 - 53170423
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcc--taggtccatgaatgtt 120  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||  ||||| ||||||||||    
T  53170557 acactttcggtttgctagcaccagaggctgttgaccttctacatagagttcaaaaggtcatgcatagcaatgtcatgtctcctataggt-catgaatgtt 53170459  T
Q  121 gtgtttacgaggattggttttgtcatccaaaaaggt 156  Q
    ||||| |||||||||| |||||  ||| ||||||||    
T  53170458 gtgttcacgaggattgattttgctatctaaaaaggt 53170423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 27 - 201
Target Start/End: Original strand, 42455674 - 42455848
Alignment:
Q  27 ttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgttt 126  Q
    |||||| |||||||  | ||||| |||| |||||||||||| |||||||| | |||||  || ||||||||||| | ||||||||||||||||||| |||    
T  42455674 ttttggcttcctagtgctagaggttgttaaccttctacatagagttcaaatgatcatggataacaatgtcatgttttctaggtccatgaatgttgttttt 42455773  T
Q  127 acgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaa 201  Q
    ||||| ||||  |||||||| |||||||||||| | ||||||||| |||  |||||||||||||||||| |||||    
T  42455774 acgagaattgactttgtcattcaaaaaggtttagcagcacaacttgttgctcgcttgccttctattcatatgtaa 42455848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 23 - 152
Target Start/End: Original strand, 38535632 - 38535760
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    |||||||||  |||||||||||||||| |||| ||| |||||||| ||||||||| ||||||| ||||||||||||||||  |||||||||| |||||||    
T  38535632 acacttttgacttcctagcaccagaggttgttcaccctctacatagagttcaaagagtcatgcatagcaatgtcatgtcttataggtccatggatgttgt 38535731  T
Q  123 gtttacgaggattggttttgtcatccaaaa 152  Q
    ||||||||||||| |||||| |||||||||    
T  38535732 gtttacgaggattagttttg-catccaaaa 38535760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 38 - 205
Target Start/End: Complemental strand, 23255742 - 23255575
Alignment:
Q  38 tagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattgg 137  Q
    ||||| || |||| |||||||||||||||| ||| |||||||| |||| || |||||| |||||||||| |||||||||| ||||||||||||||||||     
T  23255742 tagcatcataggcagttgaccttctacatagagtccaaagggttatgcataacaatgttatgtctcctaagtccatgaatattgtgtttacgaggattga 23255643  T
Q  138 ttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaagtaa 205  Q
    ||||| |||||| ||| || || |||| || ||| |||||||||| ||| |||||||| ||| |||||    
T  23255642 ttttgccatccagaaaagtctagcggcgcagcttgttgtccgcttacctcctattcatatgtgagtaa 23255575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 27 - 158
Target Start/End: Complemental strand, 25504335 - 25504204
Alignment:
Q  27 ttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgttt 126  Q
    ||||||||||||||||| |||| ||||||||||| || ||| |||| ||| |||||||| ||| ||||||||||||| ||||||||||||| ||||||||    
T  25504335 ttttggtttcctagcactagagactgttgaccttttaaatagagtttaaaaggtcatgcatagtaatgtcatgtctcataggtccatgaatattgtgttt 25504236  T
Q  127 acgaggattggttttgtcatccaaaaaggttt 158  Q
    | |||||||| ||||| ||| |||||||||||    
T  25504235 atgaggattgcttttgccattcaaaaaggttt 25504204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 23 - 201
Target Start/End: Original strand, 30940801 - 30940973
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    ||||||| | |||||||||||| |||||||||      ||||||| |||||||| |||||||| || ||||||||| | ||||||||| |||||||||||    
T  30940801 acactttcgatttcctagcacctgaggctgtt------ctacatagagttcaaaaggtcatgcataacaatgtcatatatcctaggtctatgaatgttgt 30940894  T
Q  123 gtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaa 201  Q
    ||| | |||||||| ||||| ||||||||||||| || || | || ||| ||| |||||||||||||||||| ||||||    
T  30940895 gttcatgaggattgattttgccatccaaaaaggtctagcgacgcagcttgttgcccgcttgccttctattcaagtgtaa 30940973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 32 - 154
Target Start/End: Original strand, 7536643 - 7536765
Alignment:
Q  32 gtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgag 131  Q
    |||||||||||||||||| ||||||||||||||||| |||||||| | || ||| ||||||| | ||||||| ||| |||||||||||| ||||||| |     
T  7536643 gtttcctagcaccagaggttgttgaccttctacatagagttcaaatgatcgtgcatagcaattttatgtctcgtagatccatgaatgttatgtttacaat 7536742  T
Q  132 gattggttttgtcatccaaaaag 154  Q
    |||||||||||| ||||||||||    
T  7536743 gattggttttgtgatccaaaaag 7536765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 51 - 205
Target Start/End: Original strand, 55933551 - 55933705
Alignment:
Q  51 tgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaa 150  Q
    ||||||||||||||||| ||| |||||||| || | || |||| | ||||||||||||||| |||||||||||||||||| ||||| ||||| |||||||    
T  55933551 tgttgaccttctacatagagtccaaagggttatacataacaatattatgtctcctaggtccgtgaatgttgtgtttacgatgattgattttgccatccaa 55933650  T
Q  151 aaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaagtaa 205  Q
    ||| || || || | ||  || |||||||||||||| ||||||||||| ||||||    
T  55933651 aaaagtctagcgacgcagtttgttgtccgcttgcctcctattcatgtgcaagtaa 55933705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 69 - 187
Target Start/End: Complemental strand, 23242898 - 23242780
Alignment:
Q  69 agttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaaaaaggtttaacggcacaa 168  Q
    |||| |||||||||||| || ||||||||| |||| ||||||||| ||| |||||||||||| ||||| |||||| |||||||||| | |||||||||||    
T  23242898 agtttaaagggtcatgcataacaatgtcatttctcttaggtccataaatattgtgtttacgatgattgattttgttatccaaaaagctctaacggcacaa 23242799  T
Q  169 ctttttgtccgcttgcctt 187  Q
    ||| |||| ||||||||||    
T  23242798 cttattgttcgcttgcctt 23242780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 51 - 192
Target Start/End: Original strand, 50464387 - 50464528
Alignment:
Q  51 tgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaa 150  Q
    |||||||||||||| || |||| |||||||||||| || ||||||||||||||| |  |  ||||||||||||||||||||||||  ||||| |||||||    
T  50464387 tgttgaccttctacgtagagtttaaagggtcatgcataacaatgtcatgtctcccaaatatatgaatgttgtgtttacgaggatttattttgccatccaa 50464486  T
Q  151 aaaggtttaacggcacaactttttgtccgcttgccttctatt 192  Q
    ||||   || |||| || ||| ||||||||||||||||||||    
T  50464487 aaagacctagcggcgcagcttgttgtccgcttgccttctatt 50464528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 507 - 610
Target Start/End: Complemental strand, 30378508 - 30378405
Alignment:
Q  507 gtttagacaaattctacttcttagccaaagaacacggttaccgctgtagagcatcatggaaactcattcaactcaattcaaagttccatttcctcgaatc 606  Q
    |||||||||||| ||||| |||||||||||||||||||||| | | | | ||||||||||||||| ||||| ||||||| || |||||||||||||||||    
T  30378508 gtttagacaaatactactacttagccaaagaacacggttactgttctcgtgcatcatggaaactcgttcaaatcaattccaaattccatttcctcgaatc 30378409  T
Q  607 ctca 610  Q
    ||||    
T  30378408 ctca 30378405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 23 - 205
Target Start/End: Complemental strand, 132429 - 132247
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    ||||||| |||||||||  | |||||  ||||||| ||||||| | |||| ||||||||| || || |||||||||||||  ||||| ||||| ||||||    
T  132429 acactttcggtttcctaatatcagagattgttgacattctacacagagtttaaagggtcaagcataacaatgtcatgtcttttaggttcatgattgttgt 132330  T
Q  123 gtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaagtaa 205  Q
    |||||| || || | |||| ||||| |||||||| ||||||  || ||| ||  |||||||||||||||||||| ||||||||    
T  132329 gtttacaagaatcgattttatcatctaaaaaggtataacggtgcagcttgttccccgcttgccttctattcatgcgtaagtaa 132247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 51 - 193
Target Start/End: Complemental strand, 9601221 - 9601084
Alignment:
Q  51 tgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaa 150  Q
    ||||||||||||||||| |||| |||||||| |||  |    ||||||| ||||||||| ||| | || ||||||||||||||||| |||||||||||||    
T  9601221 tgttgaccttctacataaagtttaaagggtcgtgcaca----tgtcatgactcctaggttcataagtggtgtgtttacgaggattgattttgtcatccaa 9601126  T
Q  151 aaaggtttaacggcacaactttttgtccgcttgccttctattc 193  Q
    ||| | |||||||| |||||| ||||||||||| |||||||||    
T  9601125 aaa-gcttaacggcgcaacttgttgtccgcttgtcttctattc 9601084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 98 - 201
Target Start/End: Complemental strand, 23605059 - 23604956
Alignment:
Q  98 tgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgt 197  Q
    |||||||||| ||||||||| |||||||   |||||||| ||||||||||||||||||| || |||| |||||| ||||||| ||| |||||||||||||    
T  23605059 tgtctcctagatccatgaatattgtgttgttgaggattgattttgtcatccaaaaaggtctagcggcgcaacttgttgtccggttgtcttctattcatgt 23604960  T
Q  198 gtaa 201  Q
    ||||    
T  23604959 gtaa 23604956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 99 - 205
Target Start/End: Complemental strand, 31847071 - 31846965
Alignment:
Q  99 gtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtg 198  Q
    |||||||||||||||||||||||||||  |||||||| ||| || ||||||||||||| || |||| ||  || ||| |||||||||| |||||||||||    
T  31847071 gtctcctaggtccatgaatgttgtgttagcgaggattcgttatgccatccaaaaaggtctagcggcgcaggttgttgcccgcttgcctcctattcatgtg 31846972  T
Q  199 taagtaa 205  Q
    |||||||    
T  31846971 taagtaa 31846965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 69 - 201
Target Start/End: Complemental strand, 8738203 - 8738071
Alignment:
Q  69 agttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaaaaaggtttaacggcacaa 168  Q
    |||||||||| |||||| ||  ||||||||||||| ||||| |||||||||||||| ||| | ||||| |||||||||||||||| ||||| |||| ||     
T  8738203 agttcaaaggctcatgcataaaaatgtcatgtctcttaggttcatgaatgttgtgtatacaaagattgattttgtcatccaaaaaagtttagcggcgcag 8738104  T
Q  169 ctttttgtccgcttgccttctattcatgtgtaa 201  Q
     || || ||||||| ||||  ||||||||||||    
T  8738103 tttgttatccgcttacctttcattcatgtgtaa 8738071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 51 - 153
Target Start/End: Complemental strand, 34213635 - 34213534
Alignment:
Q  51 tgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaa 150  Q
    ||||||||||||| ||| ||||||||||||||||| || ||||||  | |||||||| |||||||||||||||||||| ||||| ||||||| ||||| |    
T  34213635 tgttgaccttctagatagagttcaaagggtcatgcctaacaatgtg-tctctcctagttccatgaatgttgtgtttacaaggatcggttttgccatccga 34213537  T
Q  151 aaa 153  Q
    |||    
T  34213536 aaa 34213534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 59 - 201
Target Start/End: Complemental strand, 45661699 - 45661557
Alignment:
Q  59 ttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaaaaaggttt 158  Q
    ||||||||| ||||||||||||||| |  | |||||||||  ||| ||||||||||||| |||||||||||||||||||||||   ||||||||||   |    
T  45661699 ttctacataaagttcaaagggtcatacacaacaatgtcataactcgtaggtccatgaatattgtgtttacgaggattggttttactatccaaaaagacct 45661600  T
Q  159 aacggcacaactttttgtccgcttgccttctattcatgtgtaa 201  Q
    ||||| |||  || |||  ||||||||||||| |||| |||||    
T  45661599 aacggtacagtttgttgcacgcttgccttctactcatatgtaa 45661557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 23 - 187
Target Start/End: Original strand, 50463009 - 50463170
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    ||||||||| ||||||  |||||||| ||||||||||||||| || |||| |||||| ||||| || ||||| ||||||||| | ||  ||||   ||||    
T  50463009 acacttttgatttccttacaccagagactgttgaccttctacgtagagtttaaagggccatgcataacaatgccatgtctcccaagtatatga---ttgt 50463105  T
Q  123 gtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgcctt 187  Q
    ||||||||||||| |||||| |||||||||||   || |||| || |||  ||||||||||||||    
T  50463106 gtttacgaggatttgttttgccatccaaaaagacctagcggcgcagcttgctgtccgcttgcctt 50463170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 72 - 140
Target Start/End: Original strand, 18981651 - 18981718
Alignment:
Q  72 tcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttt 140  Q
    |||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  18981651 tcaaagggtcatgcatagtaatgtcatgtctc-taggtccatgaatgttgtgtttacgatgattggttt 18981718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 23 - 159
Target Start/End: Original strand, 46440952 - 46441088
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    ||||||| || ||||||||| |||| |||| |||||||||||||| ||| ||||||||  ||| ||||||||  ||||||| ||||| ||||||  || |    
T  46440952 acactttcggcttcctagcatcagaagctgctgaccttctacatagagtccaaagggttgtgcatagcaatgctatgtctcataggttcatgaaaattat 46441051  T
Q  123 gtttacgaggattggttttgtcatccaaaaaggttta 159  Q
     ||||||| ||||| |||||||||| |||||| ||||    
T  46441052 atttacgatgattgattttgtcatctaaaaagattta 46441088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 90 - 193
Target Start/End: Original strand, 50442609 - 50442712
Alignment:
Q  90 caatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttct 189  Q
    |||||| ||||||||||||| |||| |||||||||||| |||||||||||||| |||||||||||| |||  ||| || ||| ||| ||||||| ||||     
T  50442609 caatgttatgtctcctaggttcatggatgttgtgtttaagaggattggttttgccatccaaaaagggttagtggcgcagcttgttgcccgcttgtcttcc 50442708  T
Q  190 attc 193  Q
    ||||    
T  50442709 attc 50442712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 23 - 154
Target Start/End: Original strand, 54190914 - 54191045
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    |||||||||  || |||| | |||||| ||||||||||| ||||| ||||||||||| ||||| || |||||||||| ||| || |||||| ||| ||||    
T  54190914 acacttttgactttctagtatcagaggttgttgaccttccacatagagttcaaagggccatgcataacaatgtcatgactcttaagtccataaatattgt 54191013  T
Q  123 gtttacgaggattggttttgtcatccaaaaag 154  Q
     ||||| | |||||||||||  ||||||||||    
T  54191014 atttacaaagattggttttgctatccaaaaag 54191045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 27 - 174
Target Start/End: Original strand, 49354133 - 49354284
Alignment:
Q  27 ttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaat----gttgt 122  Q
    |||||| |||||||||| |||||    ||||||||| |||| | || ||| |||||| | ||||||||| ||||||||||  |||||||||    |||||    
T  49354133 ttttggcttcctagcactagaggtaactgaccttctgcatagaatttaaatggtcattcatagcaatgtaatgtctcctaaatccatgaattaatgttgt 49354232  T
Q  123 gtttacgaggattggttttgtcatccaaaaaggtttaacggcacaacttttt 174  Q
    |||||||| ||||| ||||||| |||||||||| |||||  |||||||||||    
T  49354233 gtttacgatgattgattttgtcgtccaaaaaggcttaacaacacaacttttt 49354284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 27 - 141
Target Start/End: Complemental strand, 53098461 - 53098347
Alignment:
Q  27 ttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgttt 126  Q
    |||||||||||||||| |||||| |||| |||||||||||| |||||||| ||||||||  | ||||||| || ||  || ||||| ||||  |||||||    
T  53098461 ttttggtttcctagcatcagaggttgttaaccttctacatagagttcaaatggtcatgcccatcaatgtcgtgacttttatgtccaagaatactgtgttt 53098362  T
Q  127 acgaggattggtttt 141  Q
    |||||||||| ||||    
T  53098361 acgaggattgatttt 53098347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 132 - 205
Target Start/End: Complemental strand, 12917984 - 12917911
Alignment:
Q  132 gattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaagtaa 205  Q
    ||||| ||||||||||||||||||| |||||||||||||| ||||| ||||||||  |||||||| ||||||||    
T  12917984 gattgattttgtcatccaaaaaggtctaacggcacaacttattgtctgcttgcctcttattcatgagtaagtaa 12917911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 57 - 154
Target Start/End: Original strand, 48657012 - 48657109
Alignment:
Q  57 ccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaaaaag 154  Q
    ||||||||||| ||| |||| | | |||| ||||||||| ||||||| |||||| ||||||||||||||||||| ||||| ||||| | |||||||||    
T  48657012 ccttctacatagagtccaaatgattatgcatagcaatgttatgtctcataggtctatgaatgttgtgtttacgatgattgattttgccgtccaaaaag 48657109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 23 - 84
Target Start/End: Original strand, 50483259 - 50483320
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatg 84  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||| |||||||| |||||||    
T  50483259 acactttcggtttcctagcaccagaggttgttgaccttctacatagagttcaaaaggtcatg 50483320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 129 - 201
Target Start/End: Original strand, 40392723 - 40392795
Alignment:
Q  129 gaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaa 201  Q
    |||||||||||||| ||||||||||||| || |||| || ||| |||||||||||||||||||||| ||||||    
T  40392723 gaggattggttttgccatccaaaaaggtctagcggcgcagcttgttgtccgcttgccttctattcaagtgtaa 40392795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 45 - 136
Target Start/End: Original strand, 46391399 - 46391488
Alignment:
Q  45 agaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattg 136  Q
    ||||| ||||||||||||||||| |||||||| | ||||||  | |||||||||||||||||  |||||||||||||| ||||||| |||||    
T  46391399 agaggttgttgaccttctacataaagttcaaaagatcatgc--aacaatgtcatgtctcctaaatccatgaatgttgtatttacgaagattg 46391488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 38 - 205
Target Start/End: Original strand, 6865898 - 6866063
Alignment:
Q  38 tagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattgg 137  Q
    |||||| ||| | |||| ||||| |||||| |||||||||||| |||| ||||||||||||||||||||| | |||||||||| || ||||   |||||     
T  6865898 tagcactagatgttgttaaccttttacatagagttcaaagggtaatgcatagcaatgtcatgtctcctagat-catgaatgttctg-ttacatagattga 6865995  T
Q  138 ttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaagtaa 205  Q
    ||||  | | ||||||||| || || |||||||| |||||   ||  |||||||||||||||||||||    
T  6865996 ttttacctttcaaaaaggtctagcgacacaacttgttgtctttttatcttctattcatgtgtaagtaa 6866063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 23 - 174
Target Start/End: Original strand, 49344202 - 49344357
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatg----aatg 118  Q
    ||||||||| |||||||| |||| |||   ||||||| ||||||| |||| |||||||||  | ||| ||||| ||||||||||| ||||||    ||||    
T  49344202 acacttttgttttcctaggaccaaaggtaattgacctcctacatatagtttaaagggtcactcatagaaatgtaatgtctcctagatccatgaattaatg 49344301  T
Q  119 ttgtgtttacgaggattggttttgtcatccaaaaaggtttaacggcacaacttttt 174  Q
    ||||||||| || ||||| ||||||| || ||||||  |||||  |||||||||||    
T  49344302 ttgtgtttatgatgattgattttgtcgtctaaaaagacttaacaccacaacttttt 49344357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 56 - 187
Target Start/End: Original strand, 23233211 - 23233340
Alignment:
Q  56 accttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaaaaagg 155  Q
    ||||||||| || ||||||| ||||||||| ||  |||||||||| |||||| | |||||||||||| |||| |||||||| ||| |  |||||||||||    
T  23233211 accttctacgtagagttcaa-gggtcatgcataataatgtcatgtttcctagattcatgaatgttgtctttatgaggattgatttggctatccaaaaagg 23233309  T
Q  156 tttaacggcacaactttttgtccgcttgcctt 187  Q
     ||| | ||||| ||| ||| |||||||||||    
T  23233310 cttagcagcacagcttgttg-ccgcttgcctt 23233340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 205
Target Start/End: Complemental strand, 12053415 - 12053329
Alignment:
Q  119 ttgtgtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaagtaa 205  Q
    ||||||||||||| |||||||||| |||| |||||||   | || | || ||| ||||| |||||||||||||||||||||||||||    
T  12053415 ttgtgtttacgagaattggttttgccatcgaaaaaggccgagcgacgcagcttgttgtctgcttgccttctattcatgtgtaagtaa 12053329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 87 - 160
Target Start/End: Original strand, 22449813 - 22449885
Alignment:
Q  87 tagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaaaaaggtttaa 160  Q
    |||||||||||| |||  ||| |||||||||||||||||||||| ||||| |||||||||| |||||| |||||    
T  22449813 tagcaatgtcatatcttatagatccatgaatgttgtgtttacga-gattgattttgtcatctaaaaagatttaa 22449885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 34 - 127
Target Start/End: Complemental strand, 28739938 - 28739845
Alignment:
Q  34 ttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgttta 127  Q
    |||||| ||||| | | |||||||||| |||||| ||||||| | |  |||| || |||||| ||||||||||||||||| |||||||||||||    
T  28739938 ttcctaacaccacaagttgttgaccttttacatagagttcaacgtgcaatgcataacaatgttatgtctcctaggtccataaatgttgtgttta 28739845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 105 - 194
Target Start/End: Original strand, 47585153 - 47585242
Alignment:
Q  105 taggtccatgaatgttgtgtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattca 194  Q
    |||||| || ||| |||||||||||| |||||||||||||||| ||||||||||| ||||  |  || ||||| | ||||||||||||||    
T  47585153 taggtctataaattttgtgtttacgaagattggttttgtcatctaaaaaggtttagcggcgtagtttgttgtctgtttgccttctattca 47585242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 108 - 197
Target Start/End: Complemental strand, 2852394 - 2852305
Alignment:
Q  108 gtccatgaatgttgtgtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgt 197  Q
    |||||||||||||||||| || |||||||||||| |||| |||||||| ||| |||| || ||| ||| | | || ||||| ||||||||    
T  2852394 gtccatgaatgttgtgttcacaaggattggttttttcattcaaaaaggcttagcggcgcagcttgttgcctgattaccttccattcatgt 2852305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 91 - 147
Target Start/End: Original strand, 40005289 - 40005345
Alignment:
Q  91 aatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatc 147  Q
    ||||||||||||||||| |  || |||||||||||||| ||||||||||||| ||||    
T  40005289 aatgtcatgtctcctagatatatcaatgttgtgtttacaaggattggttttgccatc 40005345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 205
Target Start/End: Original strand, 25931973 - 25932030
Alignment:
Q  148 caaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaagtaa 205  Q
    ||||||| | || ||||||||||| ||||||| ||||||| ||||||||| |||||||    
T  25931973 caaaaagatctagcggcacaacttgttgtccgtttgccttttattcatgtataagtaa 25932030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 80
Target Start/End: Complemental strand, 31847131 - 31847074
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggt 80  Q
    |||||||||| ||||||||| |||| || |||||||||||||||| ||| |||| |||    
T  31847131 acacttttggcttcctagcatcagaagcggttgaccttctacatagagtccaaacggt 31847074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 145 - 205
Target Start/End: Original strand, 41372253 - 41372313
Alignment:
Q  145 atccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaagtaa 205  Q
    ||||| |||||| || | || |||||| ||||| |||||||| ||||||||||||||||||    
T  41372253 atccacaaaggtctagcagcgcaacttgttgtctgcttgcctcctattcatgtgtaagtaa 41372313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 25 - 117
Target Start/End: Original strand, 45386126 - 45386218
Alignment:
Q  25 acttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaat 117  Q
    |||||||| || ||||||| |||||   || ||||||||| || | ||||||||||||||| || ||||||  |||||| || ||||||||||    
T  45386126 acttttggctttctagcacaagaggtcattaaccttctacctaaaattcaaagggtcatgcataacaatgttgtgtctcttaagtccatgaat 45386218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 109 - 201
Target Start/End: Original strand, 45760940 - 45761032
Alignment:
Q  109 tccatgaatgttgtgtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaa 201  Q
    ||||||||| |||| |||| || ||||| |||||||||||||||| || ||||| ||||  || ||  |||||| | || |||||||||||||    
T  45760940 tccatgaatattgtatttatgacgattgattttgtcatccaaaaaagtctaacgacacagtttgttacccgcttactttttattcatgtgtaa 45761032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 105 - 153
Target Start/End: Complemental strand, 52022090 - 52022042
Alignment:
Q  105 taggtccatgaatgttgtgtttacgaggattggttttgtcatccaaaaa 153  Q
    ||||||||||||||||||||||||||  ||| ||||| ||||| |||||    
T  52022090 taggtccatgaatgttgtgtttacgataattagttttttcatctaaaaa 52022042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 125; Significance: 5e-64; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 34 - 202
Target Start/End: Complemental strand, 38815327 - 38815159
Alignment:
Q  34 ttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgagga 133  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  38815327 ttcctagcaccagagggtgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgagga 38815228  T
Q  134 ttggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaag 202  Q
    ||||||||  |||||||||||| ||| |||| || ||| ||| ||||||||||||||||||||||||||    
T  38815227 ttggtttttccatccaaaaaggcttagcggcgcagcttgttgcccgcttgccttctattcatgtgtaag 38815159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 23 - 201
Target Start/End: Original strand, 22589400 - 22589577
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    ||||||| ||||||||||||||||||||||||||| || |||||| |||||||| |||||||| ||||||||||||||||| |||||| |||||||||||    
T  22589400 acactttcggtttcctagcaccagaggctgttgacttt-tacatagagttcaaaaggtcatgcatagcaatgtcatgtctcataggtctatgaatgttgt 22589498  T
Q  123 gtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaa 201  Q
    ||| |||||||||||||||| ||||||||||||| || |||| || ||| ||| ||||||||||| |||||| ||||||    
T  22589499 gttcacgaggattggttttgccatccaaaaaggtctagcggcgcagcttgttgcccgcttgccttttattcaagtgtaa 22589577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 25 - 201
Target Start/End: Complemental strand, 18804654 - 18804479
Alignment:
Q  25 acttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgt 124  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | |||||| |||||||| || |||||||||| ||||||||| || || |||| |||    
T  18804654 acttttgatttcctagcaccagaggctgttgaccttctacatagatttcaaaaggtcatgcataacaatgtcatgactcctaggttca-gagtgttttgt 18804556  T
Q  125 ttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaa 201  Q
    |||||||||||||||||| ||||||||||||| || |||| || ||| ||| | |||||||||||||||| ||||||    
T  18804555 ttacgaggattggttttgccatccaaaaaggtctagcggcgcagcttgttgcctgcttgccttctattcaagtgtaa 18804479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 27 - 201
Target Start/End: Complemental strand, 24125068 - 24124894
Alignment:
Q  27 ttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgttt 126  Q
    ||||| ||||||||||||||||| ||||| ||||||||||| |||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  24125068 ttttgatttcctagcaccagaggttgttggccttctacataaagttcaaaaggtcatgcatagcaatgtcatgtctcataggtccatgaatgttgtgttt 24124969  T
Q  127 acgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaa 201  Q
    || |||||| |||||| |||||  ||| | ||  |||| || ||||||  |||||||||||||||||| ||||||    
T  24124968 acaaggattagttttgccatccgtaaaagcttggcggcgcagcttttttgccgcttgccttctattcaagtgtaa 24124894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 25 - 163
Target Start/End: Complemental strand, 3188011 - 3187874
Alignment:
Q  25 acttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgt 124  Q
    ||||| || ||||||||| |||||| |||| |||||||||||| ||| |||||||| |||| ||||||||| ||||||||||||||||||||||||||||    
T  3188011 actttcggcttcctagcatcagaggttgttaaccttctacatagagt-caaagggttatgcatagcaatgttatgtctcctaggtccatgaatgttgtgt 3187913  T
Q  125 ttacgaggattggttttgtcatccaaaaaggtttaacgg 163  Q
    ||||||| |||||||||| ||||||||||||| ||||||    
T  3187912 ttacgagaattggttttgccatccaaaaaggtctaacgg 3187874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 33 - 187
Target Start/End: Complemental strand, 37514255 - 37514101
Alignment:
Q  33 tttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgagg 132  Q
    ||||||||| ||||||||||||||||||||||||| |||||||| |||||||| || |||||| | ||||| |||||||||||||||||| || ||||||    
T  37514255 tttcctagcgccagaggctgttgaccttctacatagagttcaaaaggtcatgcatatcaatgttacgtctcttaggtccatgaatgttgtattcacgagg 37514156  T
Q  133 attggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgcctt 187  Q
    |||| | ||| || |||||||||| ||||||| || ||| ||| |||||||||||    
T  37514155 attgatcttgccacccaaaaaggtctaacggcgcagcttgttgcccgcttgcctt 37514101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 22 - 155
Target Start/End: Complemental strand, 4699915 - 4699783
Alignment:
Q  22 aacacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttg 121  Q
    ||||||||||| ||| |||||||||||||||||||||||||| ||| |||||||||| |||||  ||||||| | ||||| |||||||||||||||||||    
T  4699915 aacacttttggcttcatagcaccagaggctgttgaccttctatataaagttcaaagg-tcatgaatagcaatattatgtcacctaggtccatgaatgttg 4699817  T
Q  122 tgtttacgaggattggttttgtcatccaaaaagg 155  Q
    ||||||| |||||| |||||| ||||||||||||    
T  4699816 tgtttacaaggattagttttgccatccaaaaagg 4699783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 23 - 167
Target Start/End: Complemental strand, 6592619 - 6592476
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    |||||||  |||||||||| ||||||| |||||||||||| |||| |||||||| |||||||| ||  ||||||||||||| ||||| ||||||||||||    
T  6592619 acactttcagtttcctagctccagaggttgttgaccttctgcatagagttcaaaaggtcatgcatat-aatgtcatgtctcataggttcatgaatgttgt 6592521  T
Q  123 gtttacgaggattggttttgtcatccaaaaaggtttaacggcaca 167  Q
    ||||||||| ||||||||||||||||| |||||| || |||||||    
T  6592520 gtttacgagtattggttttgtcatccagaaaggtctagcggcaca 6592476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 74 - 205
Target Start/End: Complemental strand, 42659220 - 42659089
Alignment:
Q  74 aaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttt 173  Q
    ||||||| |||| ||||||| | |||||| |||||| |||||||||||||||||||||||||  ||||||||||||||||||| |||||| | ||||| |    
T  42659220 aaagggttatgcatagcaatattatgtcttctaggttcatgaatgttgtgtttacgaggattaattttgtcatccaaaaaggtctaacggtataacttgt 42659121  T
Q  174 tgtccgcttgccttctattcatgtgtaagtaa 205  Q
    ||||||||||||| |||||| |||||||||||    
T  42659120 tgtccgcttgcctcctattcttgtgtaagtaa 42659089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 23 - 136
Target Start/End: Complemental strand, 3821268 - 3821155
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    ||||||||||  |||||| |||||||| ||||||||||||||||| |||||||||||| |||| ||||||||||||||||||||||| ||| |||||| |    
T  3821268 acacttttggcatcctagaaccagaggttgttgaccttctacatagagttcaaagggtaatgcatagcaatgtcatgtctcctaggttcataaatgttat 3821169  T
Q  123 gtttacgaggattg 136  Q
    ||||||||||||||    
T  3821168 gtttacgaggattg 3821155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 23 - 205
Target Start/End: Complemental strand, 39434711 - 39434531
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    |||||||||  ||||||||| |||||||  |||| |||||||||| ||| |||||||| |||| || |||||| ||||||| ||| ||||||||||||||    
T  39434711 acacttttgacttcctagcatcagaggcatttgatcttctacatagagtccaaagggttatgcatatcaatgtaatgtctcttagatccatgaatgttgt 39434612  T
Q  123 gtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaagtaa 205  Q
    |||||||||||||| ||||| ||||||||||||| || |||| || ||| |||   ||  |||| ||||||||||||||||||    
T  39434611 gtttacgaggattgattttgccatccaaaaaggtctagcggcgcagcttgttgctagc--gcctcctattcatgtgtaagtaa 39434531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 23 - 167
Target Start/End: Complemental strand, 6618328 - 6618185
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    |||||||  |||||||||| ||||||  |||||||||| | ||||  ||||||| |||||||| ||  ||||||||||||| |||||||||||||||| |    
T  6618328 acactttcagtttcctagctccagagattgttgaccttttgcatagcgttcaaaaggtcatgcatat-aatgtcatgtctcataggtccatgaatgttat 6618230  T
Q  123 gtttacgaggattggttttgtcatccaaaaaggtttaacggcaca 167  Q
    ||||||||| |||||||||||||||||||||| | ||||||||||    
T  6618229 gtttacgagtattggttttgtcatccaaaaagatctaacggcaca 6618185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 27 - 153
Target Start/End: Original strand, 25021881 - 25022007
Alignment:
Q  27 ttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgttt 126  Q
    |||||| |||||||||||||||| |||||||| || ||| | |||||||||||||||||  | ||||||||| ||||||||||||| |||||||||||||    
T  25021881 ttttggcttcctagcaccagaggttgttgaccatccacacaaagttcaaagggtcatgcacaacaatgtcatatctcctaggtccaggaatgttgtgttt 25021980  T
Q  127 acgaggattggttttgtcatccaaaaa 153  Q
    || | ||||| |||| |||||||||||    
T  25021981 acaatgattgattttatcatccaaaaa 25022007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 23 - 201
Target Start/End: Complemental strand, 43824033 - 43823856
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    |||||||||| ||||| |||  ||||||| ||||||||  ||||| |||||||| |||||||| |||||||||||||||||| || ||||| ||||||||    
T  43824033 acacttttggcttccttgcattagaggctattgacctttcacatagagttcaaatggtcatgcatagcaatgtcatgtctccgagatccattaatgttgt 43823934  T
Q  123 gtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaa 201  Q
    |||||||   ||||| ||||||||| |||||||  ||   || |||||||||| || ||||||||||||| ||||||||    
T  43823933 gtttacggcaattgggtttgtcatctaaaaaggcctagttgcgcaactttttgccctcttgccttctatt-atgtgtaa 43823856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 42 - 201
Target Start/End: Complemental strand, 4073559 - 4073400
Alignment:
Q  42 accagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggtttt 141  Q
    |||||||| ||||||||||||||| | |  |||| | ||||||| |||||||||||||| ||| || ||| ||||||||||||||||||| |||| ||||    
T  4073559 accagaggttgttgaccttctacagagaaatcaatgagtcatgcatagcaatgtcatgtttccaagatccgtgaatgttgtgtttacgagaattgatttt 4073460  T
Q  142 gtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaa 201  Q
     ||||||||||| | ||| || |||||||| ||  |||||||||||| | ||||||||||    
T  4073459 atcatccaaaaaagcttagcgacacaacttgtttcccgcttgccttccaatcatgtgtaa 4073400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 23 - 154
Target Start/End: Complemental strand, 28196236 - 28196105
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    |||||||||  |||||||||||| ||| |||||||| ||||| || |||||||||| ||||||  | |||||||||||||||||| |||| | |||||||    
T  28196236 acacttttgtcttcctagcaccataggttgttgaccatctacgtagagttcaaaggatcatgcacaacaatgtcatgtctcctagatccacggatgttgt 28196137  T
Q  123 gtttacgaggattggttttgtcatccaaaaag 154  Q
    ||||||| | |||| |||||||||||||||||    
T  28196136 gtttacgggaattgattttgtcatccaaaaag 28196105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 45 - 153
Target Start/End: Original strand, 9259377 - 9259485
Alignment:
Q  45 agaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtc 144  Q
    ||||| ||||||||||||||||| |||||| ||  |||||| |||||||||||| | ||||| ||||||||||||||| ||||||| ||||| |||||||    
T  9259377 agaggttgttgaccttctacatagagttcacagactcatgcatagcaatgtcatatatcctaagtccatgaatgttgtatttacgaagattgattttgtc 9259476  T
Q  145 atccaaaaa 153  Q
    |||||||||    
T  9259477 atccaaaaa 9259485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 23 - 145
Target Start/End: Complemental strand, 3863361 - 3863236
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaa---tgt 119  Q
    |||||||||| ||||||| |||||||| | ||||||||||||||| ||||||||||||  ||| |||||||||||| | ||||| ||| |||||   |||    
T  3863361 acacttttggcttcctaggaccagaggttattgaccttctacatagagttcaaagggtagtgcatagcaatgtcatctttcctaagtctatgaatattgt 3863262  T
Q  120 tgtgtttacgaggattggttttgtca 145  Q
    ||||||||||||||||| | ||||||    
T  3863261 tgtgtttacgaggattgatattgtca 3863236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 51 - 201
Target Start/End: Original strand, 5329693 - 5329843
Alignment:
Q  51 tgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaa 150  Q
    |||||||||||| |||  ||||||||||||||||   | |||| |||||||||||| ||| || ||||||||||||| |||||||  ||||| |||||||    
T  5329693 tgttgaccttctgcattgagttcaaagggtcatggacaacaatatcatgtctcctatgtctatcaatgttgtgtttatgaggattaattttgacatccaa 5329792  T
Q  151 aaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaa 201  Q
    |||||  ||||| |||||||| ||   |  |||||||||||||||||||||    
T  5329793 aaaggcctaacgacacaacttatttcacatttgccttctattcatgtgtaa 5329843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 108 - 201
Target Start/End: Complemental strand, 500201 - 500108
Alignment:
Q  108 gtccatgaatgttgtgtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaa 201  Q
    ||||||||||||||||||||||||||||| ||||  ||| |||||||| || |||||||| ||| ||| |||||||||||||||||| ||||||    
T  500201 gtccatgaatgttgtgtttacgaggattgattttaccattcaaaaaggcttgacggcacagcttattgcccgcttgccttctattcaagtgtaa 500108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 91 - 164
Target Start/End: Complemental strand, 8882320 - 8882247
Alignment:
Q  91 aatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaaaaaggtttaacggc 164  Q
    |||||||||||||||||||||||||||||||||||||||||||||  ||||| |||| ||||| ||||||||||    
T  8882320 aatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattaattttgccatcaaaaaatgtttaacggc 8882247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 82 - 152
Target Start/End: Complemental strand, 24451105 - 24451036
Alignment:
Q  82 atgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaaaa 152  Q
    |||| ||||||||||||||||||||||||||||||||||||||| |||| |||| |||||| |||||||||    
T  24451105 atgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcacgatgatt-gttttgccatccaaaa 24451036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 23 - 109
Target Start/End: Original strand, 35740049 - 35740135
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggt 109  Q
    |||||||  |||||||||||||||||  ||||||||||||||||| ||||||||  ||||||| || |||||||||||| |||||||    
T  35740049 acactttcagtttcctagcaccagagattgttgaccttctacatagagttcaaaaagtcatgcataacaatgtcatgtcccctaggt 35740135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 23 - 135
Target Start/End: Complemental strand, 3825679 - 3825567
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    |||| ||||| ||||||| |||| ||| ||||||||||||||| | | ||||||| || |||| |||||| ||||||| || ||| ||||||||| ||||    
T  3825679 acacctttggcttcctagaaccataggttgttgaccttctacacagaattcaaagagtaatgcatagcaacgtcatgtttcatagatccatgaatattgt 3825580  T
Q  123 gtttacgaggatt 135  Q
    |||||||| ||||    
T  3825579 gtttacgatgatt 3825567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 44 - 154
Target Start/End: Original strand, 8540461 - 8540574
Alignment:
Q  44 cagaggctgttgaccttctacatac---agttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttt 140  Q
    |||||| ||||||| |||||||||    ||||||||||||||||| || ||||||||||| | |||  | ||| |||||||||||||||| ||||| |||    
T  8540461 cagaggttgttgactttctacataataaagttcaaagggtcatgcttaacaatgtcatgttttctattttcataaatgttgtgtttacgatgattgattt 8540560  T
Q  141 tgtcatccaaaaag 154  Q
    | ||||||||||||    
T  8540561 tatcatccaaaaag 8540574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 34 - 120
Target Start/End: Original strand, 39671246 - 39671332
Alignment:
Q  34 ttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgtt 120  Q
    |||||||||||||||| |||| ||||| ||| || |||| |||||||||||  ||  ||||||||||||||||| ||||||||||||    
T  39671246 ttcctagcaccagaggttgttaaccttttacgtagagttaaaagggtcatgaataaaaatgtcatgtctcctagatccatgaatgtt 39671332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 18596759 - 18596840
Alignment:
Q  120 tgtgtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaa 201  Q
    |||||| |||||||||||||||| ||||| ||||||| || |||| || ||| ||||| |||||||||||||||| ||||||    
T  18596759 tgtgttcacgaggattggttttgccatccgaaaaggtctagcggcgcagcttgttgtcagcttgccttctattcaagtgtaa 18596840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 40223476 - 40223541
Alignment:
Q  33 tttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcat 98  Q
    |||||||||||| |||| ||||||||||||||||| |||||||| |||||||| || |||||||||    
T  40223476 tttcctagcaccggaggttgttgaccttctacatagagttcaaaaggtcatgcataacaatgtcat 40223541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 34 - 142
Target Start/End: Original strand, 121795 - 121903
Alignment:
Q  34 ttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgagga 133  Q
    ||||||||  |||||  ||||||| ||||||| | |||| ||| | |||||| || ||||||||||||  ||| ||||||| ||||||||||||||||||    
T  121795 ttcctagcctcagagattgttgacattctacacaaagtttaaaagatcatgcatatcaatgtcatgtcatctaagtccatggatgttgtgtttacgagga 121894  T
Q  134 ttggttttg 142  Q
    ||| |||||    
T  121895 ttgattttg 121903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 45 - 141
Target Start/End: Complemental strand, 8115834 - 8115738
Alignment:
Q  45 agaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggtttt 141  Q
    ||||| ||||||||||||||||| |||||||||| |||||| | |||||||||||| |   | ||||||||||||| |||||| || ||||| ||||    
T  8115834 agaggttgttgaccttctacataaagttcaaaggatcatgcattgcaatgtcatgtttataaagtccatgaatgttatgtttatgatgattgatttt 8115738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 87 - 154
Target Start/End: Complemental strand, 4066825 - 4066758
Alignment:
Q  87 tagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaaaaag 154  Q
    ||||||||| |||| |||||||||||||| ||||||||| |||| ||||||||||  |||||||||||    
T  4066825 tagcaatgtaatgtgtcctaggtccatgactgttgtgttcacgatgattggttttaccatccaaaaag 4066758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 191
Target Start/End: Original strand, 8227984 - 8228066
Alignment:
Q  109 tccatgaatgttgtgtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctat 191  Q
    ||||||||||||||||||||||||| ||||||||  |||||||||  ||||||||| || ||| || ||| ||| ||||||||    
T  8227984 tccatgaatgttgtgtttacgaggaatggttttgctatccaaaaaaatttaacggcgcagcttgttttccactttccttctat 8228066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 147
Target Start/End: Complemental strand, 6792245 - 6792189
Alignment:
Q  91 aatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatc 147  Q
    ||||||||||||| || |||||| ||||||||||||||||  |||||||||||||||    
T  6792245 aatgtcatgtctcataagtccataaatgttgtgtttacgaatattggttttgtcatc 6792189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 111 - 156
Target Start/End: Complemental strand, 24320293 - 24320248
Alignment:
Q  111 catgaatgttgtgtttacgaggattggttttgtcatccaaaaaggt 156  Q
    |||||||||||||||||||||||||| |||||  ||||||||||||    
T  24320293 catgaatgttgtgtttacgaggattgattttgatatccaaaaaggt 24320248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 105 - 201
Target Start/End: Original strand, 11611279 - 11611375
Alignment:
Q  105 taggtccatgaatgttgtgtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaa 201  Q
    ||||||||||||| |||||||||| | ||||| |||| |||||||||| | |  ||||| ||||||| |||  || || |||| ||||||| |||||    
T  11611279 taggtccatgaatattgtgtttaccaagattgattttttcatccaaaaggatccaacggtacaacttattgctcggttaccttatattcatatgtaa 11611375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 119; Significance: 2e-60; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 23 - 201
Target Start/End: Complemental strand, 103150 - 102972
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    ||||||| ||||||||||||||||||||||||||||||||||||  || ||||| |||||||| || ||||||| |||||||||||||||||||||||||    
T  103150 acactttcggtttcctagcaccagaggctgttgaccttctacatcgagctcaaaaggtcatgcataacaatgtcgtgtctcctaggtccatgaatgttgt 103051  T
Q  123 gtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaa 201  Q
    |||||||||||||||||||| ||||||||||||| || |||| |||||| ||| |||||||||||||||||| ||||||    
T  103050 gtttacgaggattggttttgccatccaaaaaggtctagcggcgcaacttgttgcccgcttgccttctattcaagtgtaa 102972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 115; Significance: 4e-58; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 23 - 201
Target Start/End: Original strand, 21326901 - 21327079
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    ||||||| | |||||||||||||||||||||||||||| |||||| |||||||| |||||||| ||||||||| ||||||||||||||||||||||||||    
T  21326901 acactttcgatttcctagcaccagaggctgttgaccttttacatagagttcaaaaggtcatgcatagcaatgttatgtctcctaggtccatgaatgttgt 21327000  T
Q  123 gtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaa 201  Q
    ||| |||||||||| ||||| ||||||||||||| ||||||| || ||| ||||| |||||||||||||||| ||||||    
T  21327001 gttcacgaggattgattttgccatccaaaaaggtctaacggcgcagcttgttgtctgcttgccttctattcaagtgtaa 21327079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 23 - 194
Target Start/End: Original strand, 45613905 - 45614076
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    ||||||| ||||||| ||||||||||||||||  ||||||||||| |||||||| | |||||| || ||||||||  |||||||||||||||||||||||    
T  45613905 acactttcggtttccaagcaccagaggctgttagccttctacatagagttcaaaagttcatgcataacaatgtcaaatctcctaggtccatgaatgttgt 45614004  T
Q  123 gtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattca 194  Q
    |||||||||||||||||||| ||||| ||||||| || |||| || ||| ||||||||||||||||||||||    
T  45614005 gtttacgaggattggttttgccatccgaaaaggtctagcggcgcagcttgttgtccgcttgccttctattca 45614076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 23 - 194
Target Start/End: Complemental strand, 19277337 - 19277164
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  19277337 acactttcggtttcctagcaccagaggttgttgaccttctacatagagttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgt 19277238  T
Q  123 gtt--tacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattca 194  Q
    |||   ||||  |||||||||| ||||||||||||| || |||| || ||| ||| |||| |||||||||||||    
T  19277237 gttcacacgaaaattggttttgccatccaaaaaggtctagcggcgcagcttattgcccgcctgccttctattca 19277164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 28 - 201
Target Start/End: Complemental strand, 4501298 - 4501125
Alignment:
Q  28 tttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgttta 127  Q
    |||||||| ||||||||||||| ||||||||||||||||| |||||||| | |||||| ||||||||||||||||||||| | |||||||||||||||||    
T  4501298 tttggttttctagcaccagaggttgttgaccttctacatagagttcaaaagttcatgcatagcaatgtcatgtctcctagattcatgaatgttgtgttta 4501199  T
Q  128 cgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaa 201  Q
    |||||||| | ||||||||| |||||||| || | || || ||| ||||||||||||||| |||||| ||||||    
T  4501198 cgaggattagctttgtcatctaaaaaggtctagcagcgcatcttattgtccgcttgccttatattcaagtgtaa 4501125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 23 - 154
Target Start/End: Complemental strand, 48539225 - 48539094
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    ||||||| ||||| |||||||||||||||||||| | |||||||| ||| |||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  48539225 acactttcggttttctagcaccagaggctgttgatcgtctacatagagtccaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgt 48539126  T
Q  123 gtttacgaggattggttttgtcatccaaaaag 154  Q
    |||||||||||||||||||| |||||||||||    
T  48539125 gtttacgaggattggttttgccatccaaaaag 48539094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 23 - 205
Target Start/End: Original strand, 28517350 - 28517532
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    |||||||||  ||||||||| ||||| | |||||||||||||||| ||| |||||||| |||| || |||||| |||||||||| |||||||||||||||    
T  28517350 acacttttgacttcctagcatcagagacagttgaccttctacatagagtccaaagggttatgcataacaatgttatgtctcctaagtccatgaatgttgt 28517449  T
Q  123 gtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaagtaa 205  Q
    |||||||||||||||||||| |||||||||| || || || |||| ||| ||| |||  ||||| ||||||||||||||||||    
T  28517450 gtttacgaggattggttttgccatccaaaaaagtctagcgacacagcttgttgcccgtctgcctcctattcatgtgtaagtaa 28517532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 35 - 202
Target Start/End: Complemental strand, 5825305 - 5825138
Alignment:
Q  35 tcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggat 134  Q
    ||||||||||||||| ||||||||||||||||| |||  ||||||| |||| ||||||||| |||||||||||||| ||| |||||||||||||||||||    
T  5825305 tcctagcaccagaggttgttgaccttctacatagagtcgaaagggttatgcatagcaatgttatgtctcctaggtctatggatgttgtgtttacgaggat 5825206  T
Q  135 tggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaag 202  Q
    |||||||| |||| |||||||| | ||||| || ||| ||  | |||||||| |||||||||||||||    
T  5825205 tggttttgccatcgaaaaaggtcttacggcgcagcttgttacctgcttgcctcctattcatgtgtaag 5825138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 23 - 154
Target Start/End: Complemental strand, 24527633 - 24527502
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    |||||||  |||||||||||| |||||| |||||||||||||||| |||||||| |||||||| |||||||||||| |||||| ||||||||||||||||    
T  24527633 acactttcagtttcctagcacgagaggcggttgaccttctacatagagttcaaaaggtcatgcatagcaatgtcatttctccttggtccatgaatgttgt 24527534  T
Q  123 gtttacgaggattggttttgtcatccaaaaag 154  Q
     || ||||||||||||||||||||||||||||    
T  24527533 attcacgaggattggttttgtcatccaaaaag 24527502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 23 - 153
Target Start/End: Complemental strand, 27521515 - 27521385
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    |||||||||||||||||||| |||||| ||||||||||||||||| |||||||| |||||||| || ||||||||||||||||| ||| |||||||||||    
T  27521515 acacttttggtttcctagcatcagaggttgttgaccttctacatagagttcaaaaggtcatgcataacaatgtcatgtctcctaagtctatgaatgttgt 27521416  T
Q  123 gtttacgaggattggttttgtcatccaaaaa 153  Q
    |||||||||||||| ||||| |||| |||||    
T  27521415 gtttacgaggattgattttgccatcgaaaaa 27521385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 25 - 194
Target Start/End: Complemental strand, 982991 - 982822
Alignment:
Q  25 acttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgt 124  Q
    ||||| ||||| ||||||||||||| ||||| ||||||||||| |||||||| |||||||| || ||||||||||||| ||| |||||||||||||||||    
T  982991 actttcggttttctagcaccagaggttgttggccttctacatagagttcaaaaggtcatgcatatcaatgtcatgtcttctatgtccatgaatgttgtgt 982892  T
Q  125 ttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattca 194  Q
    | |||||||||||| ||| ||||||||||||| || || |||| ||| ||| | | ||||||||||||||    
T  982891 tcacgaggattggtattgccatccaaaaaggtctagcgacacagcttgttgcctgtttgccttctattca 982822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 24 - 194
Target Start/End: Complemental strand, 22198029 - 22197860
Alignment:
Q  24 cacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtg 123  Q
    |||||| |||||||||||| |||||| ||||||||||||||||| |||||||| ||| |||  |||||| ||||||||||||||||| ||||||||||||    
T  22198029 cactttcggtttcctagcatcagaggttgttgaccttctacatagagttcaaaaggttatga-tagcaacgtcatgtctcctaggtcaatgaatgttgtg 22197931  T
Q  124 tttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattca 194  Q
    |||||||  |||| |||||||||||||||||| ||  |||  |||||| ||| ||||||| ||||||||||    
T  22197930 tttacgataattgattttgtcatccaaaaaggcttggcggtgcaacttgttgcccgcttgtcttctattca 22197860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 24 - 194
Target Start/End: Original strand, 22239792 - 22239961
Alignment:
Q  24 cacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtg 123  Q
    |||||| |||||||||||| |||||| ||||||||||||||||| |||||||| ||| |||  |||||| ||||||||||||||||| ||||||||||||    
T  22239792 cactttcggtttcctagcatcagaggttgttgaccttctacatagagttcaaaaggttatga-tagcaacgtcatgtctcctaggtcaatgaatgttgtg 22239890  T
Q  124 tttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattca 194  Q
    |||||||  |||| |||||||||||||||||| ||  |||  |||||| ||| ||||||| ||||||||||    
T  22239891 tttacgataattgattttgtcatccaaaaaggcttggcggtgcaacttgttgcccgcttgtcttctattca 22239961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 23 - 205
Target Start/End: Original strand, 40726543 - 40726725
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    ||||||| || ||| ||||| |||||| ||||||||||||||||| ||| |||||||| |||| || |||||  ||||||||||| ||||||||||||||    
T  40726543 acactttcggcttcatagcatcagaggttgttgaccttctacatagagtccaaagggttatgcataacaatgctatgtctcctagatccatgaatgttgt 40726642  T
Q  123 gtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaagtaa 205  Q
    ||||| |||||||| ||||| |||||||||| || ||||  | || ||| ||| |||||||||| ||||||||||||||||||    
T  40726643 gtttatgaggattgattttgccatccaaaaatgtctaacatcgcagcttgttgcccgcttgcctcctattcatgtgtaagtaa 40726725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 27 - 153
Target Start/End: Complemental strand, 43856914 - 43856788
Alignment:
Q  27 ttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgttt 126  Q
    ||||||||||||| ||||||||| ||||||||||||||||| |||||||||||||||||  | |||||||||| |||||||||||||||||||| |||||    
T  43856914 ttttggtttcctaacaccagaggttgttgaccttctacatagagttcaaagggtcatgcacaacaatgtcatgactcctaggtccatgaatgttatgttt 43856815  T
Q  127 acgaggattggttttgtcatccaaaaa 153  Q
    ||||| |||| |||||  |||||||||    
T  43856814 acgagaattgattttgctatccaaaaa 43856788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 23 - 136
Target Start/End: Complemental strand, 10905162 - 10905049
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    |||||||||||| |||||||||||||  ||||||||||||||||| ||||||||| | ||||| || |||||||||||||||||||||||||||||| ||    
T  10905162 acacttttggttgcctagcaccagagtatgttgaccttctacatagagttcaaagagccatgcataacaatgtcatgtctcctaggtccatgaatgtcgt 10905063  T
Q  123 gtttacgaggattg 136  Q
    |||||| |||||||    
T  10905062 gtttacaaggattg 10905049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 73 - 205
Target Start/End: Original strand, 45003010 - 45003142
Alignment:
Q  73 caaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaaaaaggtttaacggcacaacttt 172  Q
    ||||| || |||| ||||||||| ||||||| |||| ||||||||||||||||||||| ||||| ||||| ||||||||||||| || |||| || |||     
T  45003010 caaagagttatgcatagcaatgttatgtctcataggaccatgaatgttgtgtttacgaagattgattttgccatccaaaaaggtctagcggcgcagctta 45003109  T
Q  173 ttgtccgcttgccttctattcatgtgtaagtaa 205  Q
    |||||||||||||| ||||||||||||||||||    
T  45003110 ttgtccgcttgcctcctattcatgtgtaagtaa 45003142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 23 - 154
Target Start/End: Original strand, 30216121 - 30216252
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    ||||||| |||||||||||| |||||  |||||| |||| ||||| |||||||| |||||||| |||||||||||| ||||||||||| |||||||||||    
T  30216121 acactttcggtttcctagcatcagagtttgttgatcttccacataaagttcaaatggtcatgcatagcaatgtcatatctcctaggtctatgaatgttgt 30216220  T
Q  123 gtttacgaggattggttttgtcatccaaaaag 154  Q
    ||| |||||||| | ||||||||| |||||||    
T  30216221 gttcacgaggatcgattttgtcattcaaaaag 30216252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 31 - 201
Target Start/End: Original strand, 25187002 - 25187172
Alignment:
Q  31 ggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacga 130  Q
    ||||||| | ||| ||||| ||||||||||||| ||| |||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||  | |    
T  25187002 ggtttccgaacactagaggttgttgaccttctatatagagttcaaaaggtcatgcatagcaatgtcatgtctcctagatccatgaatgttgtgttcccaa 25187101  T
Q  131 ggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaa 201  Q
     ||||| ||||  |||| |||||| | || |||| || ||| ||| |||||||||||||||||| ||||||    
T  25187102 tgattgattttaccatctaaaaagatctagcggcgcagcttgttgcccgcttgccttctattcaagtgtaa 25187172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 20 - 153
Target Start/End: Original strand, 41117830 - 41117963
Alignment:
Q  20 tcaacacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgt 119  Q
    |||||||||| ||||||||| ||||||| | |||| |||||||||||| |||| ||| | |||||| |||||||||||||| ||||||||||||||||||    
T  41117830 tcaacactttcggtttcctaacaccagatgttgttaaccttctacatagagtttaaaagatcatgcatagcaatgtcatgtttcctaggtccatgaatgt 41117929  T
Q  120 tgtgtttacgaggattggttttgtcatccaaaaa 153  Q
    |||||| |||| ||||| |||||  |||||||||    
T  41117930 tgtgttcacgatgattgattttgctatccaaaaa 41117963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 25 - 154
Target Start/End: Original strand, 42295249 - 42295378
Alignment:
Q  25 acttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgt 124  Q
    ||||| ||||||||| |||||| || |||||||||||||||||  |||||||   |||||| || || ||||||||||||||||||||||||| ||||||    
T  42295249 actttcggtttcctaacaccaggggttgttgaccttctacatagcgttcaaaatatcatgcataacattgtcatgtctcctaggtccatgaatcttgtgt 42295348  T
Q  125 ttacgaggattggttttgtcatccaaaaag 154  Q
    |||||| |||| ||||||| ||||||||||    
T  42295349 ttacgatgattagttttgttatccaaaaag 42295378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 45 - 192
Target Start/End: Complemental strand, 34772804 - 34772657
Alignment:
Q  45 agaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtc 144  Q
    ||||| ||||||||||||||||| | ||||||  ||||||| || ||||||||||| | |||||||||||||| ||||||||||||  |||||||||| |    
T  34772804 agaggttgttgaccttctacataaacttcaaaaagtcatgcatatcaatgtcatgttttctaggtccatgaatattgtgtttacgataattggttttgcc 34772705  T
Q  145 atccaaaaaggtttaacggcacaactttttgtccgcttgccttctatt 192  Q
    || |||||| |||||||||| ||| || || || ||||| ||||||||    
T  34772704 attcaaaaaagtttaacggcgcaatttgttatctgcttgtcttctatt 34772657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 44 - 154
Target Start/End: Original strand, 5972300 - 5972410
Alignment:
Q  44 cagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgt 143  Q
    |||||| ||||||||||||||||| ||||||||  ||||||| ||| |||||||| ||||| || || |||||||||||||||||||||||| ||||||     
T  5972300 cagaggttgttgaccttctacatagagttcaaaatgtcatgcatagtaatgtcatttctcccagatctatgaatgttgtgtttacgaggattagttttgc 5972399  T
Q  144 catccaaaaag 154  Q
    |||||||||||    
T  5972400 catccaaaaag 5972410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 23 - 171
Target Start/End: Complemental strand, 23793056 - 23792908
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    ||||||||| |||| |||||||| ||| ||||||||||||| |||||||||||||| |||| | ||| ||||| |||||||||||||| || ||| ||||    
T  23793056 acacttttgttttcttagcaccacaggttgttgaccttctaaatacagttcaaaggatcatacatagtaatgtaatgtctcctaggtctataaatcttgt 23792957  T
Q  123 gtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactt 171  Q
    |||||| ||||||| |  | |||| |||||||  ||| |||||||||||    
T  23792956 gtttacaaggattgatgctatcattcaaaaagacttagcggcacaactt 23792908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 92 - 201
Target Start/End: Original strand, 45974731 - 45974840
Alignment:
Q  92 atgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctat 191  Q
    |||||||||||||||||| |||||||||||||||||| |||||   ||||||||||||||||||| ||  ||| || ||| ||||||||||| |||||||    
T  45974731 atgtcatgtctcctaggttcatgaatgttgtgtttacaaggataaattttgtcatccaaaaaggtctagtggcgcagcttgttgtccgcttgtcttctat 45974830  T
Q  192 tcatgtgtaa 201  Q
    ||| ||||||    
T  45974831 tcaagtgtaa 45974840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 34 - 201
Target Start/End: Original strand, 9281205 - 9281377
Alignment:
Q  34 ttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagca-----atgtcatgtctcctaggtccatgaatgttgtgtttac 128  Q
    |||||||||||||| | ||||||||||||||||| ||||||||||||||||   ||||     |||||||| ||| || |||||| |||||||||||||     
T  9281205 ttcctagcaccagatgttgttgaccttctacatagagttcaaagggtcatgtacagcacaacaatgtcatgactcttaagtccattaatgttgtgtttag 9281304  T
Q  129 gaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaa 201  Q
    ||| ||||||||||  ||||||||||| |||||||  ||  || ||||| |||| |||| ||||||| |||||    
T  9281305 gagaattggttttgcaatccaaaaaggcttaacggtgcagtttgttgtctgcttaccttatattcatatgtaa 9281377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 34 - 201
Target Start/End: Original strand, 9292176 - 9292348
Alignment:
Q  34 ttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagca-----atgtcatgtctcctaggtccatgaatgttgtgtttac 128  Q
    |||||||||||||| | ||||||||||||||||| ||||||||||||||||   ||||     |||||||| ||| || |||||| |||||||||||||     
T  9292176 ttcctagcaccagatgttgttgaccttctacatagagttcaaagggtcatgtacagcacaacaatgtcatgactcttaagtccattaatgttgtgtttag 9292275  T
Q  129 gaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaa 201  Q
    ||| ||||||||||  ||||||||||| |||||||  ||  || ||||| |||| |||| ||||||| |||||    
T  9292276 gagaattggttttgcaatccaaaaaggcttaacggtgcagtttgttgtctgcttaccttatattcatatgtaa 9292348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 44 - 155
Target Start/End: Complemental strand, 23037568 - 23037457
Alignment:
Q  44 cagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgt 143  Q
    |||||| |||||||| ||||| ||  ||||||||||| |||| |||||||||||| |||| |||||| |||||| |||||||||||||||||| |||||     
T  23037568 cagaggttgttgaccatctacgtagggttcaaagggttatgcatagcaatgtcatttctcttaggtctatgaattttgtgtttacgaggattgattttgc 23037469  T
Q  144 catccaaaaagg 155  Q
    |||| |||||||    
T  23037468 catctaaaaagg 23037457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 88 - 154
Target Start/End: Original strand, 27027758 - 27027824
Alignment:
Q  88 agcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaaaaag 154  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||    
T  27027758 agcaatgtcatgtctcctaggtccatgaatgttgtgttcacgaggattggttttgctatccaaaaag 27027824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 23 - 155
Target Start/End: Complemental strand, 32584645 - 32584512
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttc-aaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttg 121  Q
    |||||||  |||||||||||||||||| ||||||||||||| ||| ||||| ||| | |||||| || |||||| ||||||| ||| || ||||||||||    
T  32584645 acactttatgtttcctagcaccagaggttgttgaccttctagatagagttccaaaagatcatgcatatcaatgttatgtctcatagatcgatgaatgttg 32584546  T
Q  122 tgtttacgaggattggttttgtcatccaaaaagg 155  Q
    ||||||| | ||||| ||||  ||||||||||||    
T  32584545 tgtttacaaagattgattttaccatccaaaaagg 32584512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 34 - 153
Target Start/End: Complemental strand, 5715072 - 5714954
Alignment:
Q  34 ttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgagga 133  Q
    ||||||||||||||| ||||| || ||  ||||  |||||||||| |||| | || |||||| ||||||||||||||||| ||||||||||||| || ||    
T  5715072 ttcctagcaccagagactgttcacttttaacatggagttcaaagg-tcatacataacaatgttatgtctcctaggtccataaatgttgtgtttatgaaga 5714974  T
Q  134 ttggttttgtcatccaaaaa 153  Q
    |||||||||||||| |||||    
T  5714973 ttggttttgtcatctaaaaa 5714954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 94 - 157
Target Start/End: Complemental strand, 2904353 - 2904290
Alignment:
Q  94 gtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaaaaaggtt 157  Q
    |||||| |||||||||| |||||||||||||||||||  ||||||||||  |||||||||||||    
T  2904353 gtcatgactcctaggtctatgaatgttgtgtttacgataattggttttgctatccaaaaaggtt 2904290  T

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Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 71 - 154
Target Start/End: Original strand, 43333941 - 43334024
Alignment:
Q  71 ttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaaaaag 154  Q
    |||||| |||||||| || ||||| |||||||||||| || |||||||||| ||||| || ||||||||||| ||| |||||||    
T  43333941 ttcaaaaggtcatgcatatcaatgacatgtctcctagatctatgaatgttgagtttatgatgattggttttgccattcaaaaag 43334024  T

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Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 162
Target Start/End: Complemental strand, 38839313 - 38839231
Alignment:
Q  80 tcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaaaaaggtttaacg 162  Q
    |||||| || ||||||||||| |   ||||||||||||||||||||||||| ||||||||||  |||||||||| || |||||    
T  38839313 tcatgcataacaatgtcatgtttatcaggtccatgaatgttgtgtttacgaagattggttttaccatccaaaaatgtctaacg 38839231  T

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Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 205
Target Start/End: Complemental strand, 38766258 - 38766186
Alignment:
Q  133 attggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaagtaa 205  Q
    |||||||||| ||||||||||||| || | || || ||| ||| |||||||||| ||||||||||||||||||    
T  38766258 attggttttgccatccaaaaaggtctagctgcgcagcttgttgcccgcttgcctcctattcatgtgtaagtaa 38766186  T

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Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 100 - 187
Target Start/End: Complemental strand, 29054816 - 29054729
Alignment:
Q  100 tctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgcctt 187  Q
    ||||||||||| |||||||| || |||| |||||||||||||| |||||| ||||| ||| |||| || ||| |||  ||||||||||    
T  29054816 tctcctaggtctatgaatgtagtttttaagaggattggttttgccatccataaaggattagcggcgcagcttattgctcgcttgcctt 29054729  T

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Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 27 - 130
Target Start/End: Original strand, 36558935 - 36559037
Alignment:
Q  27 ttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgttt 126  Q
    ||||||||| ||||||||| | |  |||||| |||| |||| |||| ||| |||||||| ||  ||| ||||||||  ||||||||||||||||||||||    
T  36558935 ttttggttttctagcaccaaaagtcgttgactttctccatagagtt-aaatggtcatgcatataaatatcatgtcttataggtccatgaatgttgtgttt 36559033  T
Q  127 acga 130  Q
    ||||    
T  36559034 acga 36559037  T

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Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 51 - 125
Target Start/End: Complemental strand, 44526001 - 44525927
Alignment:
Q  51 tgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtt 125  Q
    ||||||||||||||||  |||||||| |   |||| || |||||||||||||||||  |||||||||||||||||    
T  44526001 tgttgaccttctacatggagttcaaaagaatatgcataacaatgtcatgtctcctatatccatgaatgttgtgtt 44525927  T

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Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 38 - 127
Target Start/End: Original strand, 6635041 - 6635130
Alignment:
Q  38 tagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgttta 127  Q
    ||||| |||||| |||||||||||||| || | || |||   || ||| || |||||||||||||||||| ||||| |||||||||||||    
T  6635041 tagcatcagaggttgttgaccttctacgtaaaattaaaataatcttgcataacaatgtcatgtctcctagatccataaatgttgtgttta 6635130  T

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Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 2904404 - 2904348
Alignment:
Q  28 tttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatg 84  Q
    ||||| |||||||||| ||||| |||||||||||||| || |||| |||||||||||    
T  2904404 tttggcttcctagcactagaggttgttgaccttctacgtaaagtttaaagggtcatg 2904348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 69 - 201
Target Start/End: Original strand, 31889588 - 31889720
Alignment:
Q  69 agttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaaaaaggtttaacggcacaa 168  Q
    |||||||||| |||||| ||  ||||||||||||| |||| |||  || ||| |||||  ||||| |  ||||  ||||||||| || |||||||||||     
T  31889588 agttcaaaggatcatgcataataatgtcatgtctcataggaccacaaacgttatgtttttgaggaataattttaccatccaaaatggcttaacggcacat 31889687  T
Q  169 ctttttgtccgcttgccttctattcatgtgtaa 201  Q
    ||| ||||||||||| |||  |||| |||||||    
T  31889688 cttattgtccgcttgtctttcattcgtgtgtaa 31889720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 194
Target Start/End: Complemental strand, 32336359 - 32336285
Alignment:
Q  115 aatgttgtgtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattca 194  Q
    ||||||||||| || | ||||| ||||| |||||||||||||     ||| |||||||||| ||||||||||||||||||    
T  32336359 aatgttgtgttcacaaagattgattttgccatccaaaaaggt-----ggcgcaactttttgcccgcttgccttctattca 32336285  T

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Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 117
Target Start/End: Complemental strand, 38766302 - 38766259
Alignment:
Q  74 aaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaat 117  Q
    ||||||| |||| ||||||||| |||||||||||||||||||||    
T  38766302 aaagggttatgcatagcaatgttatgtctcctaggtccatgaat 38766259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 95 - 154
Target Start/End: Original strand, 41071736 - 41071795
Alignment:
Q  95 tcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaaaaag 154  Q
    |||||||| |||| |  ||||||||| ||||||||| ||||| |||||||||||||||||    
T  41071736 tcatgtcttctagatttatgaatgttatgtttacgaagattgattttgtcatccaaaaag 41071795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 143 - 205
Target Start/End: Complemental strand, 38832226 - 38832164
Alignment:
Q  143 tcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaagtaa 205  Q
    |||||||||||||| || |||| || ||| ||| |||||||||| |||||||| |||||||||    
T  38832226 tcatccaaaaaggtctagcggcgcagcttgttgcccgcttgcctcctattcatatgtaagtaa 38832164  T

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Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 83
Target Start/End: Original strand, 23890253 - 23890302
Alignment:
Q  34 ttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcat 83  Q
    |||||||||||||||| |||||||||  |||||| |||||||||| ||||    
T  23890253 ttcctagcaccagaggttgttgacctcttacatagagttcaaaggatcat 23890302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 173 - 201
Target Start/End: Original strand, 2520934 - 2520962
Alignment:
Q  173 ttgtccgcttgccttctattcatgtgtaa 201  Q
    |||||||||||||||||||||||||||||    
T  2520934 ttgtccgcttgccttctattcatgtgtaa 2520962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 115; Significance: 4e-58; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 23 - 205
Target Start/End: Original strand, 39583292 - 39583474
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    ||||||| |||||||||||| || ||| |||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||| ||    
T  39583292 acactttcggtttcctagcatcataggttgttgaccttctgcatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggttcatgaatgtcgt 39583391  T
Q  123 gtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaagtaa 205  Q
    |||||||||||||| ||||| ||||||||||||| || |||| |||||| ||||| |||||| ||||||||||||||||||||    
T  39583392 gtttacgaggattgattttgccatccaaaaaggtctagcggcgcaacttgttgtctgcttgctttctattcatgtgtaagtaa 39583474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 23 - 201
Target Start/End: Complemental strand, 32546839 - 32546661
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    |||||||  |||||||||||||| ||||||||||||||||||||| ||||||||  ||||||| ||| ||||||||||||||||||||||||||||||||    
T  32546839 acactttcagtttcctagcaccaaaggctgttgaccttctacatagagttcaaaaagtcatgcatagtaatgtcatgtctcctaggtccatgaatgttgt 32546740  T
Q  123 gtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaa 201  Q
    ||| |||||||||||||||| ||||||||||||| || |||| || ||| ||| |||||||||||||||||| ||||||    
T  32546739 gttcacgaggattggttttgccatccaaaaaggtctagcggcgcagcttgttgcccgcttgccttctattcaagtgtaa 32546661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 23 - 201
Target Start/End: Complemental strand, 53785753 - 53785575
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||| |    
T  53785753 acactttcggtttcctagcaccagaggttgttgaccttctacatagagttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttat 53785654  T
Q  123 gtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaa 201  Q
    |||||||||||||||||||| ||||||| |||||  | ||||  | ||| ||| |||||||||||||||||| ||||||    
T  53785653 gtttacgaggattggttttgccatccaacaaggtccagcggcgtagcttgttgcccgcttgccttctattcaagtgtaa 53785575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 23 - 205
Target Start/End: Complemental strand, 26772802 - 26772620
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    |||||||||| ||||||||| ||||||| |||||||||||| ||| ||| |||||| | |||| || |||||| ||||||||||||||||||||||||||    
T  26772802 acacttttggcttcctagcatcagaggcagttgaccttctatatagagtacaaaggattatgcataacaatgttatgtctcctaggtccatgaatgttgt 26772703  T
Q  123 gtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaagtaa 205  Q
    |||||||||||||| ||||| ||||||||||||| || |||| || ||| ||| |||||||||| ||||||||||||||||||    
T  26772702 gtttacgaggattgattttgccatccaaaaaggtctagcggcgcagcttgttgcccgcttgcctcctattcatgtgtaagtaa 26772620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 23 - 201
Target Start/End: Complemental strand, 44198811 - 44198633
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    ||||||| |||||| || |||| |||||||||||||||||||||| |||||| | ||| |||| ||||||||||||||||||||||||||||||||||||    
T  44198811 acactttcggtttcttaacacccgaggctgttgaccttctacatagagttcagaaggttatgcatagcaatgtcatgtctcctaggtccatgaatgttgt 44198712  T
Q  123 gtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaa 201  Q
    |||| |||  |||| ||||| |||||||||||||| | || |||| ||| |||||||||||||||||||||| ||||||    
T  44198711 gtttgcgataattgattttgccatccaaaaaggttgagcgacacagcttgttgtccgcttgccttctattcaagtgtaa 44198633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 23 - 201
Target Start/End: Original strand, 52741575 - 52741753
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||| |||||  || ||||    
T  52741575 acacttttggtttcctagcaccagaggttgttgaccttctacatagagttcaaaaggtcatgcatagcaatgtcatgtctcctagatccatttatcttgt 52741674  T
Q  123 gtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaa 201  Q
     || |||| |||| |||||| ||||||||||||| || || | |||||| ||| ||||| |||||||||||| ||||||    
T  52741675 attcacgaagatttgttttgccatccaaaaaggtctagcgacgcaacttattgcccgctcgccttctattcaagtgtaa 52741753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 33 - 190
Target Start/End: Original strand, 26856835 - 26856992
Alignment:
Q  33 tttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgagg 132  Q
    ||||||||||| |||| |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||  |||||||||||| || |||||    
T  26856835 tttcctagcactagagactgttgaccttctacatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtgcttgcgagg 26856934  T
Q  133 attggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttcta 190  Q
    |||||||||  ||||||||||||  || |||| || ||| |||  |||||||||||||    
T  26856935 attggttttaccatccaaaaaggcctagcggcgcagcttgttgctcgcttgccttcta 26856992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 43 - 201
Target Start/End: Complemental strand, 44860 - 44699
Alignment:
Q  43 ccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatg---ttgtgtttacgaggattggtt 139  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||| |||||||||||||||||   ||||||| || |||||| |||    
T  44860 ccagaggctgttgaccttctacatagagttcaaaaggtcatgcatagcaatgtcatgtttcctaggtccatgaatgttgttgtgttcacaaggatttgtt 44761  T
Q  140 ttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaa 201  Q
    ||| ||||||||||||| || |||| ||  || ||| |||||||||||||||||| ||||||    
T  44760 ttgccatccaaaaaggtctagcggcgcagtttgttgcccgcttgccttctattcaagtgtaa 44699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 23 - 201
Target Start/End: Original strand, 37133062 - 37133240
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    ||||||| |||||| |||||||||||| ||||||||||||||||| ||||| || |||||||| |||||||||||||||||||| ||  |||||||||||    
T  37133062 acactttcggtttcttagcaccagaggttgttgaccttctacatagagttctaaaggtcatgcatagcaatgtcatgtctcctaagttaatgaatgttgt 37133161  T
Q  123 gtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaa 201  Q
    |||||  |||||||||||||  |||||||||||| || |||| ||  || ||||||  ||| |||||||||| ||||||    
T  37133162 gtttataaggattggttttgcgatccaaaaaggtctagcggcgcagtttgttgtcccattgtcttctattcaggtgtaa 37133240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 23 - 201
Target Start/End: Original strand, 38670943 - 38671121
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    |||||||||| || |||||| ||||||| | |||||||||||||| |||  |||| || |||| ||||||||| ||||||||||||||||||||||||||    
T  38670943 acacttttggctttctagcatcagaggcggatgaccttctacatagagtctaaagagttatgcatagcaatgttatgtctcctaggtccatgaatgttgt 38671042  T
Q  123 gtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaa 201  Q
    || ||||||||||||||||| |||| ||||| || || |||| || ||| |||||||||| ||| ||||| ||||||||    
T  38671043 gtgtacgaggattggttttgccatctaaaaaagtctagcggcgcagcttgttgtccgcttacctcctatttatgtgtaa 38671121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 23 - 154
Target Start/End: Original strand, 3443375 - 3443506
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    |||||||  |||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||| |||||| |||||||||  || |||||||||||    
T  3443375 acactttcagtttcctagcactagaggttgttgaccttctacatagagttcaaagggtcatgcgtaggaatgtcttgtctcctaaatctatgaatgttgt 3443474  T
Q  123 gtttacgaggattggttttgtcatccaaaaag 154  Q
    |||||||| ||||||||||| |||||| ||||    
T  3443475 gtttacgatgattggttttgccatccacaaag 3443506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 23 - 154
Target Start/End: Complemental strand, 38146100 - 38145969
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    |||||||||  |||||||||||||||| |||| || |||||| || ||||||||||||||||| || ||||||||||||||||||||||||||| |||||    
T  38146100 acacttttgacttcctagcaccagaggttgtttacattctacttagagttcaaagggtcatgcataacaatgtcatgtctcctaggtccatgaacgttgt 38146001  T
Q  123 gtttacgaggattggttttgtcatccaaaaag 154  Q
    |||||||| ||||| |||||||||| ||||||    
T  38146000 gtttacgatgattgattttgtcatctaaaaag 38145969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 23 - 205
Target Start/End: Complemental strand, 4473105 - 4472924
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    ||||||| || ||||||||||||||   | || |||||||||||| |||||||||  |||||| ||||||| |||||||||||||||| |||||| ||||    
T  4473105 acactttcggcttcctagcaccagaat-tcttaaccttctacataaagttcaaagaatcatgcatagcaatttcatgtctcctaggtctatgaatattgt 4473007  T
Q  123 gtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaagtaa 205  Q
    ||||||||| ||||||||||||||||||||| || ||| |  | | ||| || |||||||| |||||||||||||||||||||    
T  4473006 gtttacgagaattggttttgtcatccaaaaaagtctaatgatatagcttgttatccgcttgtcttctattcatgtgtaagtaa 4472924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 32 - 201
Target Start/End: Complemental strand, 21552703 - 21552530
Alignment:
Q  32 gtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagca----atgtcatgtctcctaggtccatgaatgttgtgttta 127  Q
    ||||||||||| ||||| |||||||||||||||||| |||||||| |||||||| ||| |    || |||| ||||||||||||||||||||||||||||    
T  21552703 gtttcctagcatcagagactgttgaccttctacatagagttcaaaaggtcatgcatagtacgtaatatcatatctcctaggtccatgaatgttgtgttta 21552604  T
Q  128 cgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaa 201  Q
    | || |||||||||| |||||||||||  || ||||| |||||| ||| ||| || ||||||||||| ||||||    
T  21552603 caagaattggttttgacatccaaaaagacttgacggcgcaacttgttgcccgtttaccttctattcaagtgtaa 21552530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 55 - 201
Target Start/End: Original strand, 4763888 - 4764033
Alignment:
Q  55 gaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaaaaag 154  Q
    ||||||||||||| |||||||| ||| |||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |  ||| |||||||||||    
T  4763888 gaccttctacatagagttcaaaaggttatgcatagcaatgtcatgtctcct-ggtccatgaatgttgtgtttacgaggattagaattgccatccaaaaag 4763986  T
Q  155 gtttaacggcacaactttttgtccgcttgccttctattcatgtgtaa 201  Q
    | ||   ||| |||||| ||| |||||||||||||||||| ||||||    
T  4763987 gcttggtggcgcaacttgttgcccgcttgccttctattcaagtgtaa 4764033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 23 - 161
Target Start/End: Original strand, 38978862 - 38979000
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    |||||||||||||||||||||| ||||| |||||||||||||||| |||||||| ||| |||| || |||||||||||||| |||||  || ||||||||    
T  38978862 acacttttggtttcctagcacctgaggccgttgaccttctacatatagttcaaaaggtgatgcataacaatgtcatgtctcataggtttatcaatgttgt 38978961  T
Q  123 gtttacgaggattggttttgtcatccaaaaaggtttaac 161  Q
    ||||||||  ||| |||||| |||||||||||| |||||    
T  38978962 gtttacgaaaattagttttgccatccaaaaaggcttaac 38979000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 23 - 152
Target Start/End: Complemental strand, 5338687 - 5338561
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    ||||||| || |||||||||| ||||  ||||||| ||||||||| |||||||| ||||||||||||||||||| |||||| ||||||   |||||||||    
T  5338687 acactttcggcttcctagcactagagattgttgacattctacatagagttcaaaaggtcatgcgtagcaatgtcttgtctcataggtc---gaatgttgt 5338591  T
Q  123 gtttacgaggattggttttgtcatccaaaa 152  Q
    |||||||||||||||||||| |||||||||    
T  5338590 gtttacgaggattggttttgccatccaaaa 5338561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 23 - 155
Target Start/End: Complemental strand, 13582554 - 13582422
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    ||||||||| |||||||||||||     ||||||||||||||| | |||||||| |||||||| || ||||||||||||||||||| |||||||||||||    
T  13582554 acacttttgatttcctagcaccaacaattgttgaccttctacagagagttcaaaaggtcatgcataacaatgtcatgtctcctaggaccatgaatgttgt 13582455  T
Q  123 gtttacgaggattggttttgtcatccaaaaagg 155  Q
    |||||||| ||||| ||| | ||||||||||||    
T  13582454 gtttacgaagattgatttagccatccaaaaagg 13582422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 19 - 205
Target Start/End: Complemental strand, 25325077 - 25324892
Alignment:
Q  19 ttcaacacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatg 118  Q
    ||||||||||| | ||||||||||||| ||  ||||||||||||||||| |||||||| | |||||| ||||||||||| || |||||  |||||||||     
T  25325077 ttcaacactttcgatttcctagcaccatagattgttgaccttctacatagagttcaaatgatcatgcatagcaatgtcaagtttcctaaatccatgaata 25324978  T
Q  119 ttgtgtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaagtaa 205  Q
    ||||| |||||| ||||| ||||| ||||||||||    ||||| | || ||| ||||| | ||||||||||||||| |||||||||    
T  25324977 ttgtgcttacgatgattgcttttgccatccaaaaa-aactaacgacgcaccttattgtctgtttgccttctattcatatgtaagtaa 25324892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 52 - 170
Target Start/End: Original strand, 52411983 - 52412101
Alignment:
Q  52 gttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaaa 151  Q
    |||||||||||||||| ||||||||||||||||| || ||||||||||||||||||  |||| ||| |||||||||| | ||||| ||||| ||||||||    
T  52411983 gttgaccttctacatagagttcaaagggtcatgcataacaatgtcatgtctcctagacccataaatattgtgtttacaatgattgattttgccatccaaa 52412082  T
Q  152 aaggtttaacggcacaact 170  Q
    |||| |||||| |||||||    
T  52412083 aaggcttaacgacacaact 52412101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 23 - 201
Target Start/End: Complemental strand, 49018007 - 49017833
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    ||||||| |||||||||||||| |||| |||||| ||||||| || |||||||| |||||||| ||  ||||||||||    |||||| |||||||||||    
T  49018007 acactttcggtttcctagcacccgaggttgttgatcttctacgtaaagttcaaaaggtcatgcatataaatgtcatgt----taggtcaatgaatgttgt 49017912  T
Q  123 gtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaa 201  Q
    ||||| |||||||| ||||| |||||||||||  |   |||  || ||| |||||||||||||||||||||| ||||||    
T  49017911 gtttatgaggattgattttgccatccaaaaagtatcggcggtgcagcttgttgtccgcttgccttctattcaagtgtaa 49017833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 27 - 150
Target Start/End: Original strand, 54508451 - 54508574
Alignment:
Q  27 ttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgttt 126  Q
    ||||| ||| ||||||||||||| |||||||||||| ||||  || |||||| ||||||||| |||| |||| ||| |||||||||||||||||||||||    
T  54508451 ttttgattttctagcaccagaggttgttgaccttctgcataaggtacaaaggatcatgcgtaacaatatcatatctgctaggtccatgaatgttgtgttt 54508550  T
Q  127 acgaggattggttttgtcatccaa 150  Q
    | ||  ||||||||||||||||||    
T  54508551 aagataattggttttgtcatccaa 54508574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 90 - 187
Target Start/End: Original strand, 4669793 - 4669890
Alignment:
Q  90 caatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgcctt 187  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||| |||||| ||||||||||||||  |||| || ||| ||| |||||||||||    
T  4669793 caatgtcatgtctccttggtccatgaatgttgtgtttacgatgattgattttgttatccaaaaaggtttggcggcgcagcttgttgcccgcttgcctt 4669890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 27 - 154
Target Start/End: Complemental strand, 37992372 - 37992246
Alignment:
Q  27 ttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgttt 126  Q
    |||||| ||| |||||| ||||| ||||||||||||||| | ||||||| |||||||||  || ||||||||| ||| || || ||||||||||||||||    
T  37992372 ttttggcttcatagcactagaggttgttgaccttctacaaagagttcaa-gggtcatgcacagtaatgtcatgactcgtacgtgcatgaatgttgtgttt 37992274  T
Q  127 acgaggattggttttgtcatccaaaaag 154  Q
     ||| |||||||||| ||||||||||||    
T  37992273 tcgaagattggttttatcatccaaaaag 37992246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 59 - 161
Target Start/End: Original strand, 7257655 - 7257757
Alignment:
Q  59 ttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaaaaaggttt 158  Q
    ||||||||| |||||||||||  || | ||||||| |||||| | ||||||||||||||||||||||||||| |||| |||||||||| |||||||| ||    
T  7257655 ttctacatatagttcaaagggctatccatagcaatatcatgtattctaggtccatgaatgttgtgtttacgaagattagttttgtcattcaaaaaggctt 7257754  T
Q  159 aac 161  Q
    |||    
T  7257755 aac 7257757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 23 - 201
Target Start/End: Original strand, 25094635 - 25094809
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    |||||||||  || ||||||||| | | | ||||||||||||||| |||||||| |||||||| ||||||||| || |||  || |||||||||||||||    
T  25094635 acacttttgactttctagcaccaaaagatattgaccttctacatatagttcaaatggtcatgcatagcaatgtaatatcttttaagtccatgaatgttgt 25094734  T
Q  123 gtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaa 201  Q
    ||| |||| |||| ||||||  ||| ||||||| ||||||    | ||| ||||| |||| ||||| ||||||||||||    
T  25094735 gttcacgaagattagttttgcaatctaaaaaggcttaacg----atcttgttgtctgcttaccttccattcatgtgtaa 25094809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 27 - 154
Target Start/End: Original strand, 7502079 - 7502204
Alignment:
Q  27 ttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgttt 126  Q
    ||||||||||||||||||||||| ||||||||||||||  | |||| ||||||||||||  | |||||||||| ||| ||| ||||||||| || |||||    
T  7502079 ttttggtttcctagcaccagaggttgttgaccttctac--agagtttaaagggtcatgcacaacaatgtcatgactcatagatccatgaatattatgttt 7502176  T
Q  127 acgaggattggttttgtcatccaaaaag 154  Q
    ||||  |||| |||||  ||||||||||    
T  7502177 acgataattgattttgctatccaaaaag 7502204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 69 - 201
Target Start/End: Complemental strand, 3643149 - 3643019
Alignment:
Q  69 agttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaaaaaggtttaacggcacaa 168  Q
    |||||||||| |||||| || ||||||||||| |  ||||||||||||||||||||||  || ||||| ||||||||||| ||||||  ||||| | ||     
T  3643149 agttcaaaggatcatgcataacaatgtcatgttttttaggtccatgaatgttgtgttt--gatgattgattttgtcatccgaaaaggcctaacgacgcag 3643052  T
Q  169 ctttttgtccgcttgccttctattcatgtgtaa 201  Q
    ||| ||| ||||||||||||||||  |||||||    
T  3643051 cttattgcccgcttgccttctattattgtgtaa 3643019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 58 - 201
Target Start/End: Original strand, 46940871 - 46941014
Alignment:
Q  58 cttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaaaaaggtt 157  Q
    |||||||||| |||||||||| ||||||    |||||||||| ||| ||||| ||||||||||||||||||||  |||| |||||| ||||||||||       
T  46940871 cttctacatagagttcaaaggatcatgcacgacaatgtcatgactcataggttcatgaatgttgtgtttacgaaaattgattttgttatccaaaaagacc 46940970  T
Q  158 taacggcacaactttttgtccgcttgccttctattcatgtgtaa 201  Q
    || |||  |||||| ||| | | || ||||||||||||||||||    
T  46940971 tagcggtgcaacttgttgcctgtttaccttctattcatgtgtaa 46941014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 23 - 153
Target Start/End: Complemental strand, 7900902 - 7900772
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    ||||||| || ||||||||| |||||| ||||||||||||||||| ||||  |||| | || | ||||||||| |||| |||||||||||| ||| || |    
T  7900902 acactttcggcttcctagcatcagaggttgttgaccttctacatagagtttgaaggattatacatagcaatgttatgtttcctaggtccatcaatatttt 7900803  T
Q  123 gtttacgaggattggttttgtcatccaaaaa 153  Q
    |||||| | |||| |||||  ||||||||||    
T  7900802 gtttacaatgattagttttaccatccaaaaa 7900772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 174
Target Start/End: Original strand, 26393813 - 26393900
Alignment:
Q  87 tagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaaaaaggtttaacggcacaacttttt 174  Q
    ||||||| | ||||||||| |||| ||||||||||||||||||||||||| | ||  ||||||| |||||||| ||| ||||||||||    
T  26393813 tagcaatattatgtctccttggtctatgaatgttgtgtttacgaggattgatatttccatccaacaaggtttagcggtacaacttttt 26393900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 174
Target Start/End: Complemental strand, 42206081 - 42205960
Alignment:
Q  53 ttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaaaa 152  Q
    ||||| ||||||||| |||| ||| |||||||| ||| ||||| |||| |||||| ||||| || ||||||||||||| ||||| |||| |||||  |||    
T  42206081 ttgacattctacatagagtttaaatggtcatgcatagaaatgtaatgtatcctagatccataaacgttgtgtttacgatgattgattttatcatcttaaa 42205982  T
Q  153 aggtttaacggcacaacttttt 174  Q
    ||| | | || |||||||||||    
T  42205981 aggctaagcgacacaacttttt 42205960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 51234646 - 51234563
Alignment:
Q  37 ctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgtt 120  Q
    |||||| |||||| ||||||||||||||||| |||||||| ||| |||| || |||||| |||||||||| | |||| ||||||    
T  51234646 ctagcatcagaggttgttgaccttctacatagagttcaaaaggttatgcataacaatgttatgtctcctaagcccattaatgtt 51234563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 205
Target Start/End: Complemental strand, 8592144 - 8592003
Alignment:
Q  63 acatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaaaaaggtttaacg 162  Q
    ||||| ||||||| | ||||||| || |||||||| | || |||||||||| ||| ||||||||| | |||||| ||||| ||||||||||||   | ||    
T  8592144 acatagagttcaacgagtcatgcatatcaatgtcacgccttctaggtccatcaatattgtgttta-gcggattgattttgccatccaaaaaggcccagcg 8592046  T
Q  163 gcacaactttttgtccgcttgccttctattcatgtgtaagtaa 205  Q
    || || ||| ||  || |||||||| |||||||||||||||||    
T  8592045 gcgcagcttgttacccacttgccttatattcatgtgtaagtaa 8592003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 60 - 154
Target Start/End: Original strand, 32690966 - 32691060
Alignment:
Q  60 tctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaaaaag 154  Q
    |||||||| |||| |||| |||||||  |  ||| | |||||||||| ||| |||||||||||||||| |||||||| |||| ||||||||||||    
T  32690966 tctacatagagttaaaagagtcatgcacaataatattatgtctcctaagtctatgaatgttgtgtttaagaggattgattttatcatccaaaaag 32691060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 105 - 154
Target Start/End: Complemental strand, 26276577 - 26276528
Alignment:
Q  105 taggtccatgaatgttgtgtttacgaggattggttttgtcatccaaaaag 154  Q
    ||||||||||||||||||||||| |||||||| ||||| |||||||||||    
T  26276577 taggtccatgaatgttgtgtttatgaggattgattttgccatccaaaaag 26276528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 3376808 - 3376848
Alignment:
Q  27 ttttggtttcctagcaccagaggctgttgaccttctacata 67  Q
    ||||||||||||||||| ||||| |||||||||||||||||    
T  3376808 ttttggtttcctagcactagaggttgttgaccttctacata 3376848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 23 - 127
Target Start/End: Complemental strand, 43123189 - 43123085
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    ||||||||| ||| ||||||||| ||  ||||||| ||||||| | ||||||||||||| ||| ||| ||| | ||||||  |||||| || ||| ||||    
T  43123189 acacttttgattttctagcaccatagtttgttgactttctacaaaaagttcaaagggtcgtgcatagaaatattatgtcttataggtcaataaatattgt 43123090  T
Q  123 gttta 127  Q
    |||||    
T  43123089 gttta 43123085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 96 - 164
Target Start/End: Original strand, 53502590 - 53502658
Alignment:
Q  96 catgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaaaaaggtttaacggc 164  Q
    |||||||| ||||| ||||||||||||||||||||  |||| ||||||||  ||||||  |||||||||    
T  53502590 catgtctcttaggtgcatgaatgttgtgtttacgaaaattgattttgtcagtcaaaaatatttaacggc 53502658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 100 - 155
Target Start/End: Complemental strand, 50446232 - 50446177
Alignment:
Q  100 tctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaaaaagg 155  Q
    ||||||||||| ||| |||| || ||||  ||||||||||||||||||||||||||    
T  50446232 tctcctaggtctatggatgtagtttttagaaggattggttttgtcatccaaaaagg 50446177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 3376880 - 3376941
Alignment:
Q  102 tcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaaaaaggtttaacgg 163  Q
    ||||| ||| |||||||||||||||| || ||||| |||||||||| |||||| | ||||||    
T  3376880 tcctatgtctatgaatgttgtgtttatgatgattgattttgtcatctaaaaagatctaacgg 3376941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 110; Significance: 4e-55; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 32 - 201
Target Start/End: Complemental strand, 21473038 - 21472869
Alignment:
Q  32 gtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgag 131  Q
    |||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||| | |||    
T  21473038 gtttcctagcaccagaggctgttgaccttctacatagagttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgcgttcaggag 21472939  T
Q  132 gattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaa 201  Q
    || |||||||| ||||||||||||| || |||| |||||| ||| |||||||| ||||||||| ||||||    
T  21472938 gactggttttgccatccaaaaaggtctagcggcgcaacttattgcccgcttgcattctattcaagtgtaa 21472869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 23 - 201
Target Start/End: Complemental strand, 22346939 - 22346761
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    ||||||| |||||||||| | |||||| ||||||||||||||| | |||||||| |||||||| ||| |||||||||||||||||||  |||||||||||    
T  22346939 acactttcggtttcctagtagcagaggttgttgaccttctacacagagttcaaaaggtcatgcatagaaatgtcatgtctcctaggtttatgaatgttgt 22346840  T
Q  123 gtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaa 201  Q
    ||| ||||||||| |||||| ||||||||||||| || |||| || ||| |||||||||||||||||||||| ||||||    
T  22346839 gttcacgaggattagttttgccatccaaaaaggtctagcggcgcagcttgttgtccgcttgccttctattcaagtgtaa 22346761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 31 - 201
Target Start/End: Original strand, 24177582 - 24177752
Alignment:
Q  31 ggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacga 130  Q
    |||||||||||| ||||||||||| |||||||||||| ||||||||  ||||||| |||||||||||| |||||||||||||||||||||||||| ||||    
T  24177582 ggtttcctagcatcagaggctgtttaccttctacatagagttcaaaaagtcatgcatagcaatgtcatatctcctaggtccatgaatgttgtgttcacga 24177681  T
Q  131 ggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaa 201  Q
    |||||||||||| || |||||||||| || |||  || ||| ||| ||||||| |||||||||| ||||||    
T  24177682 ggattggttttgccaaccaaaaaggtctagcggtgcagcttgttgcccgcttgtcttctattcaagtgtaa 24177752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 23 - 201
Target Start/End: Original strand, 28041190 - 28041368
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    ||||||| |||||||||||||||||||| |||||||||||||||| |||||||| |||||||| |||||||||||||||  ||| |||||||||||||||    
T  28041190 acactttcggtttcctagcaccagaggcggttgaccttctacatagagttcaaaaggtcatgcatagcaatgtcatgtcctctaagtccatgaatgttgt 28041289  T
Q  123 gtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaa 201  Q
    | | | |||||||| ||||  ||||||||||||| || ||||  | ||| ||||||||||| |||||||| | ||||||    
T  28041290 gctcatgaggattgatttttccatccaaaaaggtctagcggcggagcttgttgtccgcttgtcttctatttaagtgtaa 28041368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 23 - 153
Target Start/End: Complemental strand, 34644610 - 34644480
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    ||||||| || ||||||||| |||||| ||||||||||||||||| ||| |||||||| |||| || |||||| ||||||||||||||||||||||||||    
T  34644610 acactttcggcttcctagcatcagaggttgttgaccttctacatagagtccaaagggttatgcatatcaatgttatgtctcctaggtccatgaatgttgt 34644511  T
Q  123 gtttacgaggattggttttgtcatccaaaaa 153  Q
    |||||||| ||||| ||||| ||||||||||    
T  34644510 gtttacgatgattgattttgccatccaaaaa 34644480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 25 - 194
Target Start/End: Complemental strand, 2898744 - 2898575
Alignment:
Q  25 acttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgt 124  Q
    ||||| ||||||||||||||||||| ||||||||||||||||| |||||||| | |||||| || |||| ||||||||| || |  ||||||||||||||    
T  2898744 actttcggtttcctagcaccagaggttgttgaccttctacatagagttcaaaagatcatgcataacaatatcatgtctcatacgatcatgaatgttgtgt 2898645  T
Q  125 ttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattca 194  Q
    ||| |||||||| ||||| |||||||||||| ||| ||||  | ||| || ||| |||| ||||||||||    
T  2898644 ttaagaggattgattttgccatccaaaaaggcttagcggcgtagcttgttatccacttgtcttctattca 2898575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 23 - 201
Target Start/End: Original strand, 20259860 - 20260038
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    ||||||| |||||| |||||||||||| ||||||||||||||||| |||||||| |||||||| ||| ||||||||||||| || ||  || ||||||||    
T  20259860 acactttcggtttcttagcaccagaggttgttgaccttctacatagagttcaaaaggtcatgcatagtaatgtcatgtctcataagttaataaatgttgt 20259959  T
Q  123 gtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaa 201  Q
    |||||   |||||||||||| ||||||||||||| || |||| ||  || ||| ||  ||| |||||||||| ||||||    
T  20259960 gtttatatggattggttttgccatccaaaaaggtctagcggcgcagtttgttgccccattgtcttctattcaagtgtaa 20260038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 23 - 156
Target Start/End: Original strand, 45659711 - 45659842
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    ||||||| | ||||||| |||||||||||||||||||||||  || |||||||| | |||||| |||||||||||||||||||||||| || ||||| ||    
T  45659711 acactttcgatttcctatcaccagaggctgttgaccttcta--tagagttcaaaagatcatgcatagcaatgtcatgtctcctaggtcaataaatgtcgt 45659808  T
Q  123 gtttacgaggattggttttgtcatccaaaaaggt 156  Q
    |||||||||||  |||||||||| ||||||||||    
T  45659809 gtttacgaggaccggttttgtcacccaaaaaggt 45659842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 70 - 201
Target Start/End: Original strand, 868513 - 868642
Alignment:
Q  70 gttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaaaaaggtttaacggcacaac 169  Q
    ||||||| |||||||| |||||||||||||||||||| ||||||||||  |||||| || ||||||||||||| ||||||||||||| || |||| || |    
T  868513 gttcaaaaggtcatgcatagcaatgtcatgtctcctaagtccatgaat--tgtgttcacaaggattggttttgccatccaaaaaggtctagcggcgcagc 868610  T
Q  170 tttttgtccgcttgccttctattcatgtgtaa 201  Q
    || ||| |||||||||||||||||| ||||||    
T  868611 ttgttgcccgcttgccttctattcaagtgtaa 868642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 105 - 205
Target Start/End: Complemental strand, 5454057 - 5453957
Alignment:
Q  105 taggtccatgaatgttgtgtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaagta 204  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| || |||| || ||| ||| |||||||||| |||||||||||||||||    
T  5454057 taggtccatgaatgttgtgtttacaaggattggttttgtcatccaaaaaggtctagcggcgcagcttgttgcccgcttgcctcctattcatgtgtaagta 5453958  T
Q  205 a 205  Q
    |    
T  5453957 a 5453957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 23 - 201
Target Start/End: Complemental strand, 7213294 - 7213109
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    ||||||| ||||||||||||  |||| ||||||| ||||| |||| ||||||||  ||||||| ||  |||||||||||| |||||||||||||||||||    
T  7213294 acactttcggtttcctagcattagagactgttgagcttctgcataaagttcaaaatgtcatgcataataatgtcatgtcttctaggtccatgaatgttgt 7213195  T
Q  123 gt-------ttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaa 201  Q
    ||       | |||| ||||||||||  ||||||||||||| || |||| |||||| ||| |||||||||||||||||| ||||||    
T  7213194 gttcacgaatcacgatgattggttttaccatccaaaaaggtctagcggcgcaacttgttgcccgcttgccttctattcaagtgtaa 7213109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 90 - 201
Target Start/End: Complemental strand, 30688534 - 30688423
Alignment:
Q  90 caatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttct 189  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||  || |||| || ||| ||| ||||||||| |||    
T  30688534 caatgtcatgactcctgggtccatgaatgttgtgtttacgaggattggttttgttatccaaaaaggcctagcggcgcagcttgttgcccgcttgccatct 30688435  T
Q  190 attcatgtgtaa 201  Q
    ||||||||||||    
T  30688434 attcatgtgtaa 30688423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 34 - 164
Target Start/End: Complemental strand, 2764512 - 2764382
Alignment:
Q  34 ttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgagga 133  Q
    ||||||||| |||||| ||||||||||||||||| ||| |||||||| ||||  | |||||| ||||||| ||||||||| |||||||||||||||| ||    
T  2764512 ttcctagcatcagaggttgttgaccttctacataaagtccaaagggttatgcaaatcaatgttatgtctcttaggtccataaatgttgtgtttacgatga 2764413  T
Q  134 ttggttttgtcatccaaaaaggtttaacggc 164  Q
    ||| ||||  |||||||||||||||| ||||    
T  2764412 ttgattttaccatccaaaaaggtttagcggc 2764382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 23 - 201
Target Start/End: Original strand, 31737386 - 31737563
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    ||||||| | ||| ||||||  ||||||| ||||| ||||||||| |||||||| |||||||| || |||||| |||| |||||| ||||||||| | ||    
T  31737386 acactttcgattttctagcattagaggctattgacattctacatagagttcaaaaggtcatgcatatcaatgttatgtttcctagatccatgaat-tagt 31737484  T
Q  123 gtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaa 201  Q
    |||||||||||||| ||||| |||||||||||| ||  |||| || ||| ||||| | |||||||||||||| ||||||    
T  31737485 gtttacgaggattgattttgccatccaaaaaggcttggcggcgcagcttgttgtctgtttgccttctattcaagtgtaa 31737563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 95 - 194
Target Start/End: Complemental strand, 4611161 - 4611062
Alignment:
Q  95 tcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattca 194  Q
    ||||||||||||||||||||||| ||||||| |||| ||||| ||||||||||||||||||| |||| ||||| ||| ||||||||||||||| ||||||    
T  4611161 tcatgtctcctaggtccatgaatattgtgttcacgatgattgattttgtcatccaaaaaggtctaacagcacagcttgttgtccgcttgccttttattca 4611062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 25 - 131
Target Start/End: Complemental strand, 38731651 - 38731545
Alignment:
Q  25 acttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgt 124  Q
    |||||||| ||| |||||||||||| |||| |||||||||||| |||||||||||||||||  |  ||||||||| ||||||||||||||||| ||||||    
T  38731651 acttttggcttcttagcaccagaggttgttaaccttctacatagagttcaaagggtcatgcacaataatgtcatgactcctaggtccatgaatattgtgt 38731552  T
Q  125 ttacgag 131  Q
    |||||||    
T  38731551 ttacgag 38731545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 25 - 202
Target Start/End: Complemental strand, 47459724 - 47459548
Alignment:
Q  25 acttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgt 124  Q
    |||||||| ||||||| | ||||||| |||||||||||||||| ||| ||||||   |||| ||||||||| |||||||||| ||| || ||||||||||    
T  47459724 acttttggcttcctagtatcagaggcagttgaccttctacatagagtccaaaggaatatgcatagcaatgttatgtctcctaagtctataaatgttgtgt 47459625  T
Q  125 ttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaag 202  Q
    ||||||| |||| ||| | ||| ||||||||| || | || || ||| ||||| ||||| || |||||||||||||||    
T  47459624 ttacgagaattgatttagccattcaaaaaggtctagc-gcgcagcttgttgtctgcttggctcctattcatgtgtaag 47459548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 115 - 201
Target Start/End: Original strand, 1114023 - 1114109
Alignment:
Q  115 aatgttgtgtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaa 201  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||| ||| ||||||| |||||||||| ||||||    
T  1114023 aatgttgtgtttacgaggattggttttgccatccaaaaaggtctaacggcacagcttgttgcccgcttggcttctattcaagtgtaa 1114109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 23 - 141
Target Start/End: Original strand, 4862052 - 4862170
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    ||||||| | ||||||| ||||| | | ||||||||||||||||| ||||||||||||||||| || |||||||| ||| | ||| ||||||||||||||    
T  4862052 acactttcgatttcctaacaccaaaagttgttgaccttctacatagagttcaaagggtcatgcataacaatgtcacgtcccttagatccatgaatgttgt 4862151  T
Q  123 gtttacgaggattggtttt 141  Q
    | |||||||||||| ||||    
T  4862152 gattacgaggattgatttt 4862170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 23 - 107
Target Start/End: Original strand, 29169856 - 29169940
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctag 107  Q
    ||||||| ||||||||||||||||||| |||| |||||||||||| |||||||| ||||||||  ||||||||||||||||||||    
T  29169856 acactttcggtttcctagcaccagaggttgttaaccttctacatagagttcaaaaggtcatgcacagcaatgtcatgtctcctag 29169940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 51 - 201
Target Start/End: Original strand, 35387747 - 35387890
Alignment:
Q  51 tgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaa 150  Q
    |||||| |||||||||| ||||||||||| ||||| || ||||||||||||||||| ||       || ||||||||| | ||||||||||||||| |||    
T  35387747 tgttgatcttctacatagagttcaaagggacatgcatatcaatgtcatgtctcctaagt-------tgatgtgtttacaatgattggttttgtcattcaa 35387839  T
Q  151 aaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaa 201  Q
    ||| ||||||||||  | ||| |||||| |||| |||||||||||||||||    
T  35387840 aaaagtttaacggcgtagcttgttgtccacttgtcttctattcatgtgtaa 35387890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 47 - 205
Target Start/End: Original strand, 48841169 - 48841327
Alignment:
Q  47 aggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcat 146  Q
    |||| |||||||||||||||| |||  |||| || |||| ||  ||||| ||||||||||  || |||||| || ||||||||||||||| |||||  ||    
T  48841169 aggcagttgaccttctacatagagtctaaagagttatgcataataatgttatgtctcctaaatctatgaatattatgtttacgaggattgattttgcaat 48841268  T
Q  147 ccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaagtaa 205  Q
    ||||||| || || | || |||||| |||||||||| |||  |||||||||||||||||    
T  48841269 ccaaaaaagtctagcagcgcaacttgttgtccgcttacctcatattcatgtgtaagtaa 48841327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 19035426 - 19035345
Alignment:
Q  120 tgtgtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaa 201  Q
    |||||| |||||||||||||||||||||||||||||| || |||| || ||| ||||||| |||||||||||||| ||||||    
T  19035426 tgtgttcacgaggattggttttgtcatccaaaaaggtctagcggcgcagcttgttgtccgattgccttctattcaagtgtaa 19035345  T

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Target: chr1; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 37 - 129
Target Start/End: Original strand, 18616230 - 18616322
Alignment:
Q  37 ctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacg 129  Q
    |||||||| |||||||||||| ||||||||| | ||||||||||||||| ||||||| | |||| || ||||||||| ||| |||| ||||||    
T  18616230 ctagcacccgaggctgttgacattctacatataattcaaagggtcatgcatagcaatattatgtatcttaggtccataaatattgtatttacg 18616322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 201
Target Start/End: Original strand, 28493477 - 28493572
Alignment:
Q  106 aggtccatgaatgttgtgtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaa 201  Q
    ||||||||||||||| |||| |||||||||| ||||| ||||||||||||| || |||| ||  || ||||||| ||| |||||||||| ||||||    
T  28493477 aggtccatgaatgttatgttcacgaggattgattttgccatccaaaaaggtctagcggcgcagtttgttgtccgtttgtcttctattcaagtgtaa 28493572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 154
Target Start/End: Original strand, 45835319 - 45835380
Alignment:
Q  93 tgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaaaaag 154  Q
    |||||| ||| ||||||| ||||||||||||||||||||||||| ||||| |||||||||||    
T  45835319 tgtcatctcttctaggtctatgaatgttgtgtttacgaggattgattttgccatccaaaaag 45835380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 201
Target Start/End: Original strand, 50161485 - 50161665
Alignment:
Q  25 acttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgt-----ctcctaggtccatgaatgt 119  Q
    |||||||| | |||||||||| ||| || |||| ||||||||| |||||||||| ||||||  ||||||| |||||     | | |||||||||||||||    
T  50161485 acttttggctccctagcaccaaaggttgatgacattctacatagagttcaaaggatcatgcagagcaatg-catgttacgacacataggtccatgaatgt 50161583  T
Q  120 tgtgtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaa 201  Q
    |||||||| ||||||||  ||||  ||| |||| || ||| ||||||| ||| ||| ||  |||||||||||| || |||||    
T  50161584 tgtgtttaagaggattgaatttgctatctaaaacggcttagcggcacagcttgttgcccttttgccttctatttatttgtaa 50161665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 88 - 164
Target Start/End: Complemental strand, 21934357 - 21934280
Alignment:
Q  88 agcaatgtcatgtctcctaggtccatgaatgtt-gtgtttacgaggattggttttgtcatccaaaaaggtttaacggc 164  Q
    ||||||||  |||||||||| |||||||||||| || |||| |||||||||||||| |||||||||||| ||| ||||    
T  21934357 agcaatgttttgtctcctagttccatgaatgtttgtatttaagaggattggttttgccatccaaaaagggttagcggc 21934280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 205
Target Start/End: Original strand, 6790800 - 6790908
Alignment:
Q  98 tgtctcctaggtccatgaatgttgtgtttacgaggattg-gttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatg 196  Q
    ||||| ||||||||||||||||| |||||||||  || |  |||||||||||||||||   || |||||||  || ||  |||| |||||||||||||||    
T  6790800 tgtcttctaggtccatgaatgttatgtttacgataatagatttttgtcatccaaaaagacctagcggcacagtttgttacccgcctgccttctattcatg 6790899  T
Q  197 tgtaagtaa 205  Q
    |||||||||    
T  6790900 tgtaagtaa 6790908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 98 - 201
Target Start/End: Original strand, 29170322 - 29170425
Alignment:
Q  98 tgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgt 197  Q
    |||||||||||||||||||||||| |||||| |  ||| |||||| |||  |||||||| ||||||  ||  || || ||| ||||||||||||||| ||    
T  29170322 tgtctcctaggtccatgaatgttgcgtttacaacaatttgttttgccatttaaaaaggtctaacggtgcagtttgttatccacttgccttctattcaagt 29170421  T
Q  198 gtaa 201  Q
    ||||    
T  29170422 gtaa 29170425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 33 - 128
Target Start/End: Original strand, 50314697 - 50314791
Alignment:
Q  33 tttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttac 128  Q
    ||||||| ||| ||| | ||||||| ||||||||| |||||||||||| || || | |||||||||| |||||| ||||||||||  |||||||||    
T  50314697 tttcctaacacaagatgttgttgactttctacatagagttcaaagggttatacgcaacaatgtcatgactccta-gtccatgaataatgtgtttac 50314791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 205
Target Start/End: Original strand, 6590840 - 6590875
Alignment:
Q  170 tttttgtccgcttgccttctattcatgtgtaagtaa 205  Q
    |||||||||||||||||||||||| |||||||||||    
T  6590840 tttttgtccgcttgccttctattcttgtgtaagtaa 6590875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 90 - 153
Target Start/End: Original strand, 13181118 - 13181181
Alignment:
Q  90 caatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaaaaa 153  Q
    ||||||||||||| ||| |||||| |||| ||| |||| |  ||||||||||||||||||||||    
T  13181118 caatgtcatgtcttctacgtccatcaatgctgtatttatggagattggttttgtcatccaaaaa 13181181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 201
Target Start/End: Original strand, 40515989 - 40516115
Alignment:
Q  74 aaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttt 173  Q
    |||||||||||| | ||||| | ||||||| ||| | ||||||||||||||||||||  |||| |||||  |||| ||||| |||||| |   || || |    
T  40515989 aaagggtcatgcatggcaatataatgtctc-tagattcatgaatgttgtgtttacgattattgattttgcaatccgaaaagatttaacagtgtaatttat 40516087  T
Q  174 tgtccgcttgccttctattcatgtgtaa 201  Q
    ||||||||||  || |||||||||||||    
T  40516088 tgtccgcttgttttatattcatgtgtaa 40516115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 23 - 113
Target Start/End: Original strand, 37932280 - 37932370
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccat 113  Q
    ||||||| || |||||||||||||||| ||||||| ||||| ||  |||| |||   || ||| ||| ||||||||||||| |||||||||    
T  37932280 acactttcggcttcctagcaccagaggatgttgacattctatattgagtttaaacattcgtgcatagtaatgtcatgtctcataggtccat 37932370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 100 - 158
Target Start/End: Original strand, 51067195 - 51067252
Alignment:
Q  100 tctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaaaaaggttt 158  Q
    |||||||||||||| ||||| || || ||||||||| ||||||||||||||||| ||||    
T  51067195 tctcctaggtccat-aatgtcgtattcacgaggattagttttgtcatccaaaaaagttt 51067252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 112 - 164
Target Start/End: Complemental strand, 7483839 - 7483787
Alignment:
Q  112 atgaatgttgtgtttacgaggattggttttgtcatccaaaaaggtttaacggc 164  Q
    ||||||||||||||||||| |||| |||||| |||| ||||||| ||| ||||    
T  7483839 atgaatgttgtgtttacgaagattagttttgccatctaaaaaggcttagcggc 7483787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 11128363 - 11128435
Alignment:
Q  69 agttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggtttt 141  Q
    |||| ||| |||||||| || |||||| |||||||||||||| || |||| ||||||||| | |||| |||||    
T  11128363 agtttaaaaggtcatgcatatcaatgttatgtctcctaggtctataaatgatgtgtttacaatgatttgtttt 11128435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 67
Target Start/End: Complemental strand, 16500078 - 16500034
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacata 67  Q
    |||||||||  |||||||||  |||||||||||||||||||||||    
T  16500078 acacttttgacttcctagcattagaggctgttgaccttctacata 16500034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 92 - 201
Target Start/End: Original strand, 25375961 - 25376072
Alignment:
Q  92 atgtcatgtctcctaggtccatgaatgt--tgtgtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttct 189  Q
    |||||||| |||||| || |||||||||  |||||||| ||| ||| |||||   |||||||||||  ||||| |  ||||| ||||  | |||||||||    
T  25375961 atgtcatgactcctatgttcatgaatgtgttgtgtttatgagaattagttttactatccaaaaaggcctaacgacgtaacttgttgtttgtttgccttct 25376060  T
Q  190 attcatgtgtaa 201  Q
    ||||||||||||    
T  25376061 attcatgtgtaa 25376072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 95
Target Start/End: Complemental strand, 42919904 - 42919832
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgt 95  Q
    ||||||||| ||||| ||||  ||||  |||| |||||||||||| |||| ||||||||||||  ||||||||    
T  42919904 acacttttgatttccaagcagtagagattgttaaccttctacatagagtttaaagggtcatgcagagcaatgt 42919832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 107; Significance: 3e-53; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 23 - 201
Target Start/End: Complemental strand, 13413395 - 13413217
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    ||||||| ||||| | |||| |||||||||||||||||||||||| |||||||| |||||||| || |||||||||||||||||||||||||||||||||    
T  13413395 acactttcggttttcaagcagcagaggctgttgaccttctacatagagttcaaaaggtcatgcataacaatgtcatgtctcctaggtccatgaatgttgt 13413296  T
Q  123 gtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaa 201  Q
    ||||| ||| |||||||||| ||||||||||||  ||||||| || ||| ||||||||||| |||||||||| ||||||    
T  13413295 gtttatgagaattggttttgccatccaaaaaggcctaacggctcagcttgttgtccgcttgtcttctattcaagtgtaa 13413217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 23 - 201
Target Start/End: Original strand, 41867971 - 41868148
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    ||||||| || |||||||||||||||||||||||||||||||||| |||||||| |||||||| || ||||||||||||||| |||||||||||||||||    
T  41867971 acactttcgggttcctagcaccagaggctgttgaccttctacatagagttcaaaaggtcatgcataacaatgtcatgtctcccaggtccatgaatgttgt 41868070  T
Q  123 gtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaa 201  Q
    |||||||||||||||||||| || |||||||| | || |||| |||||| ||| |||||||| ||||||||| ||||||    
T  41868071 gtttacgaggattggttttgcca-ccaaaaagatctagcggcgcaacttgttgcccgcttgctttctattcaagtgtaa 41868148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 23 - 201
Target Start/End: Complemental strand, 17344682 - 17344504
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    |||||||  |||||||||||||| ||||||||||||||||||||| |||||||| |||||||| || |||||||||||||||||||||||||||||||||    
T  17344682 acactttcagtttcctagcaccataggctgttgaccttctacatagagttcaaaaggtcatgcataacaatgtcatgtctcctaggtccatgaatgttgt 17344583  T
Q  123 gtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaa 201  Q
    |||||||||||||| ||||   |||||||||||| || |||| || ||| ||| | |||||||||||||||| ||||||    
T  17344582 gtttacgaggattgatttttcgatccaaaaaggtctatcggcgcagcttgttgccggcttgccttctattcaagtgtaa 17344504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 23 - 201
Target Start/End: Original strand, 4413129 - 4413307
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    ||||||| ||||||||||||||||||  |||||||||||||||||  ||||||| |||||||| |||||| |||||||||||||||||||||||||||||    
T  4413129 acactttcggtttcctagcaccagagattgttgaccttctacatagggttcaaaaggtcatgcatagcaaagtcatgtctcctaggtccatgaatgttgt 4413228  T
Q  123 gtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaa 201  Q
    ||| | |||||||| ||||| ||||||||||||| || |||| || ||| ||| || ||||||||||||||| ||||||    
T  4413229 gttcatgaggattgattttgccatccaaaaaggtctagcggcgcagcttgttgcccacttgccttctattcaagtgtaa 4413307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 23 - 194
Target Start/End: Original strand, 9685478 - 9685649
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    ||||||||| ||| ||||||| ||||||||| ||||||||| ||| |||||||| |||||||  ||||||||||||||||||||||||||||||||||||    
T  9685478 acacttttgattttctagcactagaggctgtggaccttctatatagagttcaaaaggtcatggatagcaatgtcatgtctcctaggtccatgaatgttgt 9685577  T
Q  123 gtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattca 194  Q
    ||| || | ||||| ||||| ||||||||||||| || |||| || ||| ||| ||||||||||| ||||||    
T  9685578 gttcacaaagattgtttttgccatccaaaaaggtctagcggcgcagcttgttgcccgcttgccttatattca 9685649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 37 - 201
Target Start/End: Original strand, 18745031 - 18745195
Alignment:
Q  37 ctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattg 136  Q
    ||||||||| ||||||||| ||||||||||| |||||||| | |||||| |||||||||||| | ||||||||| ||||||||||||||||  |||||||    
T  18745031 ctagcaccataggctgttggccttctacatagagttcaaaagatcatgcatagcaatgtcatatttcctaggtctatgaatgttgtgtttataaggattg 18745130  T
Q  137 gttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaa 201  Q
    |||||| ||||||||||||| || |||| || ||| |||  |||||| |||||||||| ||||||    
T  18745131 gttttgccatccaaaaaggtctagcggcgcagcttattgctcgcttgtcttctattcaagtgtaa 18745195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 23 - 205
Target Start/End: Complemental strand, 28225044 - 28224862
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    ||||||| || ||||||||  |||||| ||||||||||||||||| ||| |||||| | |||| |  |||| | |||||||||||||| |||||||||||    
T  28225044 acactttcggcttcctagcttcagaggttgttgaccttctacatagagtccaaaggattatgcatgacaatattatgtctcctaggtcaatgaatgttgt 28224945  T
Q  123 gtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaagtaa 205  Q
    ||||| || |||| |||||| ||||||||||||| || |||| || ||| ||| ||||||| || |||||||| |||||||||    
T  28224944 gtttatgaagatttgttttgccatccaaaaaggtctagcggcgcagcttattgcccgcttgtctcctattcatttgtaagtaa 28224862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 23 - 171
Target Start/End: Original strand, 7760908 - 7761056
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    |||| |||||||| ||| ||||||||| ||||||||||||||||| |||||||||| |||||||||||||||| ||||||| || || || ||||| |||    
T  7760908 acacctttggttttctatcaccagaggttgttgaccttctacatagagttcaaaggatcatgcgtagcaatgtgatgtctcataagttcaagaatgatgt 7761007  T
Q  123 gtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactt 171  Q
    | ||||||  |||| ||||| |||||||||||| ||| |||| ||||||    
T  7761008 gcttacgaaaattgattttgacatccaaaaaggcttagcggcgcaactt 7761056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 23 - 135
Target Start/End: Complemental strand, 44686460 - 44686348
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    ||||||| || ||||||||| |||||  ||||||||||||||||| | | |||||||| |||| ||||||||| ||||||||||||||| ||||||||||    
T  44686460 acactttcggcttcctagcatcagagtttgttgaccttctacatagattccaaagggttatgcatagcaatgttatgtctcctaggtccgtgaatgttgt 44686361  T
Q  123 gtttacgaggatt 135  Q
    |||||||||||||    
T  44686360 gtttacgaggatt 44686348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 23 - 154
Target Start/End: Original strand, 19161846 - 19161977
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    ||||||| |||||  || ||| |||||||| | ||||| |||||| |||||||| |||||||| || ||||||||||||||||||||| ||||||  |||    
T  19161846 acactttcggttttgtaacactagaggctgcttaccttttacatagagttcaaaaggtcatgcatatcaatgtcatgtctcctaggtcaatgaatagtgt 19161945  T
Q  123 gtttacgaggattggttttgtcatccaaaaag 154  Q
    |||| ||||||||| |||||||||||||||||    
T  19161946 gttttcgaggattgattttgtcatccaaaaag 19161977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 34 - 205
Target Start/End: Complemental strand, 5532453 - 5532284
Alignment:
Q  34 ttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgagga 133  Q
    |||||||||||| ||| |||||| |||||||||| |||||||||||||||||  | ||||| |||| |||||| || |||||||| ||||||||| ||||    
T  5532453 ttcctagcaccataggttgttgagcttctacatagagttcaaagggtcatgcacaacaatgccatgactcctaagttcatgaatg-tgtgtttacaagga 5532355  T
Q  134 ttggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaagtaa 205  Q
    ||| |||| |||||||||| ||  ||||||| |||||| || || | ||| |||||||| |||| |||||||    
T  5532354 ttgattttctcatccaaaacggcctaacggcgcaacttgttatctgtttgtcttctatt-atgtataagtaa 5532284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 74 - 205
Target Start/End: Complemental strand, 27494304 - 27494173
Alignment:
Q  74 aaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttt 173  Q
    ||||||| |||  ||||||||| |||||||||| ||| |||||| ||||||||||||  |||||||||| ||||||||||||| ||||||| || ||| |    
T  27494304 aaagggttatgtatagcaatgttatgtctcctaagtctatgaatattgtgtttacgaatattggttttgccatccaaaaaggtctaacggcgcagcttgt 27494205  T
Q  174 tgtccgcttgccttctattcatgtgtaagtaa 205  Q
    || | |||||||| |||||||| |||||||||    
T  27494204 tgcctgcttgcctcctattcatatgtaagtaa 27494173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 50 - 156
Target Start/End: Complemental strand, 27502379 - 27502273
Alignment:
Q  50 ctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatcca 149  Q
    |||||||||||||||||| | | |||||||| |||| ||||||| ||||||||||||| || ||||||||||||||||||| ||||| |||||  |||||    
T  27502379 ctgttgaccttctacatagaatccaaagggttatgcatagcaatatcatgtctcctagatctatgaatgttgtgtttacgaagattgattttgcaatcca 27502280  T
Q  150 aaaaggt 156  Q
    |||||||    
T  27502279 aaaaggt 27502273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 33 - 154
Target Start/End: Complemental strand, 3825760 - 3825639
Alignment:
Q  33 tttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgagg 132  Q
    |||||||||| || ||| ||||||||||| ||||  |||||||||  |||||| |||||||||||||||| ||||| |||| ||||||||||||| || |    
T  3825760 tttcctagcatcaaaggttgttgaccttcaacatcgagttcaaagaatcatgcatagcaatgtcatgtcttctaggaccataaatgttgtgtttatgaag 3825661  T
Q  133 attggttttgtcatccaaaaag 154  Q
    || | |||||||||||||||||    
T  3825660 atcgattttgtcatccaaaaag 3825639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 44 - 153
Target Start/End: Original strand, 16351928 - 16352037
Alignment:
Q  44 cagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgt 143  Q
    |||||| ||||||||||||||||| |||||||| ||||||||  | |||||||||||||| ||||| ||||||| || ||||||||| ||||| |||||     
T  16351928 cagaggttgttgaccttctacatagagttcaaatggtcatgcacaacaatgtcatgtctcttaggtacatgaatattatgtttacgatgattgtttttgc 16352027  T
Q  144 catccaaaaa 153  Q
    |||| |||||    
T  16352028 catctaaaaa 16352037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 122 - 201
Target Start/End: Original strand, 3208406 - 3208485
Alignment:
Q  122 tgtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaa 201  Q
    ||||||||||||||||||||| |||||||||||||||| |||| || ||| ||| |||||||||||||||||| ||||||    
T  3208406 tgtttacgaggattggttttgccatccaaaaaggtttagcggcgcagcttgttgcccgcttgccttctattcaagtgtaa 3208485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 31 - 155
Target Start/End: Original strand, 2886686 - 2886810
Alignment:
Q  31 ggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacga 130  Q
    ||||||| |||| ||||||||||||| ||| |||||| |||||||| |  ||||| ||||||| |||| |||| | ||||||| ||||||||||||| ||    
T  2886686 ggtttccaagcatcagaggctgttgatcttttacatagagttcaaaagagcatgcatagcaatatcatatctcgt-ggtccataaatgttgtgtttatga 2886784  T
Q  131 ggattg-gttttgtcatccaaaaagg 155  Q
    ||||||  ||||||||||||||||||    
T  2886785 ggattgatttttgtcatccaaaaagg 2886810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 62 - 194
Target Start/End: Original strand, 23485038 - 23485171
Alignment:
Q  62 tacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatcc-aaaaaggtttaa 160  Q
    |||||| |||||||| | |||||| || |||||  |||||||||||||||||||| ||||||||||| |  |||||||||| || || |||||||||| |    
T  23485038 tacatagagttcaaaagatcatgcataacaatgctatgtctcctaggtccatgaacgttgtgtttacaaaaattggttttgccaaccaaaaaaggtttga 23485137  T
Q  161 cggcacaactttttgtccgcttgccttctattca 194  Q
    |||| || ||| ||||| ||||||||| ||||||    
T  23485138 cggcgcagcttgttgtcggcttgccttttattca 23485171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 23 - 155
Target Start/End: Original strand, 13147163 - 13147295
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    ||||||||||||| ||| ||||||||  |||||||||||| |||| ||| ||||||||| |||  | ||||||| ||||| ||| || ||||||| ||||    
T  13147163 acacttttggttttctaacaccagagattgttgaccttcttcatatagtacaaagggtcgtgcacaacaatgtcttgtcttctaagttcatgaatattgt 13147262  T
Q  123 gtttacgaggattggttttgtcatccaaaaagg 155  Q
     |||||||  |||| |||||||||| |||||||    
T  13147263 atttacgaaaattgattttgtcatctaaaaagg 13147295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 23 - 110
Target Start/End: Original strand, 20142788 - 20142875
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtc 110  Q
    ||||||||||||| |||||| || ||| |||||||||| |||||| |||||||| |||||| | || |||||||||||||||||||||    
T  20142788 acacttttggttttctagcatcaaaggttgttgaccttatacatagagttcaaaaggtcatacataacaatgtcatgtctcctaggtc 20142875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 44 - 155
Target Start/End: Original strand, 32029170 - 32029281
Alignment:
Q  44 cagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgt 143  Q
    |||||||||||||||||||||||| ||||||||| ||||| | || |||||||||||||  ||||  ||||||| | |||||||||| ||||  || |||    
T  32029170 cagaggctgttgaccttctacatagagttcaaagagtcatccataacaatgtcatgtcttataggatcatgaatatcgtgtttacgaagattaattctgt 32029269  T
Q  144 catccaaaaagg 155  Q
    ||| ||||||||    
T  32029270 cattcaaaaagg 32029281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 57 - 155
Target Start/End: Original strand, 44684955 - 44685053
Alignment:
Q  57 ccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaaaaagg 155  Q
    ||||||||||| ||||||||||||||||| || |||| | ||||||  || |||||||||||||||||||| ||| ||| ||||| ||||| |||||||    
T  44684955 ccttctacatagagttcaaagggtcatgcataacaatattatgtcttataagtccatgaatgttgtgtttatgagaattagttttttcatctaaaaagg 44685053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 34 - 109
Target Start/End: Original strand, 34814892 - 34814967
Alignment:
Q  34 ttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggt 109  Q
    |||||| |||||||| |||||||||||||||||| |||||||| |||||||| || |||||| ||||||| |||||    
T  34814892 ttcctaacaccagagactgttgaccttctacatagagttcaaatggtcatgcataacaatgttatgtctcttaggt 34814967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 50 - 154
Target Start/End: Original strand, 11921300 - 11921398
Alignment:
Q  50 ctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatcca 149  Q
    |||||||||||||||||| |||||||||||| ||      |||| | || ||| ||||||||||||||||||||||||| |||||| |||| | ||||||    
T  11921300 ctgttgaccttctacatagagttcaaagggttat------caattttatatcttctaggtccatgaatgttgtgtttactaggattagtttcgccatcca 11921393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 23 - 126
Target Start/End: Original strand, 33612610 - 33612711
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    |||||||||| |||||| |||| |||| ||||||| ||||||| |  ||||| ||||||   | |||||||||| |||| ||||||||||||||||||||    
T  33612610 acacttttggcttcctaacaccggaggttgttgacattctacaga--gttcagagggtcgctcatagcaatgtcttgtcccctaggtccatgaatgttgt 33612707  T
Q  123 gttt 126  Q
    ||||    
T  33612708 gttt 33612711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 121 - 201
Target Start/End: Complemental strand, 42122763 - 42122683
Alignment:
Q  121 gtgtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaa 201  Q
    ||||||||||||| |||||||| |||||||||| || || |||| || ||| |||| ||||||||||||||||| ||||||    
T  42122763 gtgtttacgaggactggttttgccatccaaaaaagtctagcggcgcagcttattgttcgcttgccttctattcaagtgtaa 42122683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 34 - 153
Target Start/End: Complemental strand, 44720355 - 44720236
Alignment:
Q  34 ttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgagga 133  Q
    |||||| ||||||||| |||| || || |||||| |||||||||| |||||| || |||| |  | |||| ||||||||| |||  ||||||||||||      
T  44720355 ttcctaacaccagaggttgttcactttttacataaagttcaaaggatcatgcataacaatattttatctcataggtccataaataatgtgtttacgagat 44720256  T
Q  134 ttggttttgtcatccaaaaa 153  Q
    ||||||||||||||| ||||    
T  44720255 ttggttttgtcatcctaaaa 44720236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 156
Target Start/End: Original strand, 1296175 - 1296273
Alignment:
Q  58 cttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaaaaaggt 156  Q
    ||||||| || ||||||||||||||||| ||| ||| |||||| ||||  ||| ||||||||| |||||| ||| |||||||||   ||||||||||||    
T  1296175 cttctacgtagagttcaaagggtcatgcatagtaatatcatgtttcctgtgtctatgaatgttttgtttatgagaattggttttacaatccaaaaaggt 1296273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 153
Target Start/End: Original strand, 15515286 - 15515340
Alignment:
Q  99 gtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaaaaa 153  Q
    ||||||||||||||  ||||||||||| |||||||||||||||| ||||||||||    
T  15515286 gtctcctaggtccaccaatgttgtgttcacgaggattggttttgccatccaaaaa 15515340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 27 - 153
Target Start/End: Original strand, 8036549 - 8036677
Alignment:
Q  27 ttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtag--caatgtcatgtctcctaggtccatgaatgttgtgt 124  Q
    |||||| ||| || || |||||| |||||||||| |||||| |||||||||| | |||| ||   |||||||||||||||||||||| |  || |||| |    
T  8036549 ttttggcttcgtaacatcagaggttgttgaccttttacatagagttcaaaggtttatgcatatatcaatgtcatgtctcctaggtccgtagatattgtct 8036648  T
Q  125 ttacgaggattggttttgtcatccaaaaa 153  Q
    |||| | ||||| ||||||||| ||||||    
T  8036649 ttacaatgattgattttgtcattcaaaaa 8036677  T

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Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 142
Target Start/End: Original strand, 20142872 - 20142935
Alignment:
Q  78 ggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttg 142  Q
    |||||||| || |||||||||||||||||||| |||| |||||||||| ||||| ||||||||||    
T  20142872 ggtcatgcataacaatgtcatgtctcctaggt-catggatgttgtgttgacgagtattggttttg 20142935  T

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Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 114 - 201
Target Start/End: Original strand, 2626001 - 2626088
Alignment:
Q  114 gaatgttgtgtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaa 201  Q
    ||||||||||||||||| ||||  |||    ||| | |||||| ||||||| || ||| |||||||||||||||||||||||||||||    
T  2626001 gaatgttgtgtttacgaagattaatttaactatctacaaaggtctaacggcgcagcttgttgtccgcttgccttctattcatgtgtaa 2626088  T

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Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 126 - 201
Target Start/End: Complemental strand, 30602430 - 30602355
Alignment:
Q  126 tacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaa 201  Q
    ||||||||||||||||| ||||||||||||  || | || || ||| ||| |||| ||||||||||||||||||||    
T  30602430 tacgaggattggttttgccatccaaaaaggcctagcagcgcagcttgttgcccgcatgccttctattcatgtgtaa 30602355  T

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Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 130 - 205
Target Start/End: Complemental strand, 41702209 - 41702134
Alignment:
Q  130 aggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaagtaa 205  Q
    ||||||||||||| ||||||||||||  ||  ||| || ||| ||| || ||||||||||||||||||||||||||    
T  41702209 aggattggttttgccatccaaaaaggcctagtggcgcagcttgttgcccacttgccttctattcatgtgtaagtaa 41702134  T

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Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 73 - 150
Target Start/End: Complemental strand, 24765255 - 24765178
Alignment:
Q  73 caaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaa 150  Q
    ||||||||||| | || |||||||||||||| |||||||||||||||| || ||| || ||||  ||||| |||||||    
T  24765255 caaagggtcatccataacaatgtcatgtctcttaggtccatgaatgttctggttatgatgattaattttggcatccaa 24765178  T

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Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 62 - 154
Target Start/End: Original strand, 3262244 - 3262336
Alignment:
Q  62 tacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaaaaag 154  Q
    |||||| ||||||||||||| |||  | || ||||||| ||| ||||||||| ||| || |||||||||| |||| ||||| |||| ||||||    
T  3262244 tacatagagttcaaagggtcttgcacatcagtgtcatgactcataggtccataaatattatgtttacgagaattgattttgccatcaaaaaag 3262336  T

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Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 134 - 194
Target Start/End: Original strand, 20143119 - 20143179
Alignment:
Q  134 ttggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattca 194  Q
    ||||||||| ||||||||||||| || |||| |||||| ||||| | ||||||||||||||    
T  20143119 ttggttttgccatccaaaaaggtctagcggcgcaacttgttgtctgtttgccttctattca 20143179  T

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Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 33 - 141
Target Start/End: Complemental strand, 29808109 - 29808001
Alignment:
Q  33 tttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgagg 132  Q
    |||||||||| | |||| |||||||||| |||||| |||| ||  ||||||||  | |||  |||||  |||||||||||||||||| || ||||| |||    
T  29808109 tttcctagcatcggaggttgttgaccttttacatagagtttaagtggtcatgcacaacaacatcatgaatcctaggtccatgaatgtcgtatttacaagg 29808010  T
Q  133 attggtttt 141  Q
    |||| ||||    
T  29808009 attgatttt 29808001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 72 - 167
Target Start/End: Original strand, 10296638 - 10296733
Alignment:
Q  72 tcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaaaaaggtttaacggcaca 167  Q
    ||||||||| |||  | ||||||| ||||  |||| ||||||| |||||| ||||| ||||||| |||||| |||||||||||  ||| |||||||    
T  10296638 tcaaagggtaatgtatggcaatgttatgtaccctaagtccatggatgttgcgtttaagaggattagttttgccatccaaaaagagttagcggcaca 10296733  T

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Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 153
Target Start/End: Complemental strand, 2888449 - 2888404
Alignment:
Q  108 gtccatgaatgttgtgtttacgaggattggttttgtcatccaaaaa 153  Q
    ||||| |||||||||||||||||| |||  ||||||||||||||||    
T  2888449 gtccacgaatgttgtgtttacgagaattaattttgtcatccaaaaa 2888404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 120
Target Start/End: Complemental strand, 2888560 - 2888463
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgtt 120  Q
    |||||||||| |||||| ||| ||||| ||||||||||||||| |  |||||||  |||||||  | ||||||||| |||| ||  ||||| ||||||    
T  2888560 acacttttggcttcctaacacaagaggttgttgaccttctacacaaggttcaaaatgtcatgcacaacaatgtcatatctcttaaatccataaatgtt 2888463  T

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Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 150
Target Start/End: Original strand, 24762900 - 24762977
Alignment:
Q  73 caaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaa 150  Q
    ||||||||||| | || |||||||||||||| ||||||||||| |||| || ||| || ||||  ||||| |||||||    
T  24762900 caaagggtcatccataacaatgtcatgtctcttaggtccatgagtgttctggttatgatgattaattttggcatccaa 24762977  T

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Target: chr6 (Bit Score: 99; Significance: 2e-48; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 23 - 205
Target Start/End: Original strand, 17249368 - 17249550
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    |||||||||| ||||||||| ||||||| |||||||||||||||| ||| |||||| | |||  ||||||||| |||||||||| || ||||||||||||    
T  17249368 acacttttggcttcctagcatcagaggcagttgaccttctacatagagtccaaaggattatgtatagcaatgttatgtctcctaagttcatgaatgttgt 17249467  T
Q  123 gtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaagtaa 205  Q
    |||||||||||||||||||| ||||||||||||| || |||| || ||| ||| |||||||||| |||||||||| |||||||    
T  17249468 gtttacgaggattggttttgccatccaaaaaggtctagcggcgcagcttgttgcccgcttgcctcctattcatgtataagtaa 17249550  T

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Target: chr6; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 31 - 194
Target Start/End: Complemental strand, 959616 - 959454
Alignment:
Q  31 ggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacga 130  Q
    ||||||||||||||||||| |||||||||||||| || |||||||| |||||||| |||||||||  |||||||||||||||||||||||||||||||||    
T  959616 ggtttcctagcaccagaggttgttgaccttctacgta-agttcaaaaggtcatgcatagcaatgttgtgtctcctaggtccatgaatgttgtgtttacga 959518  T
Q  131 ggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattca 194  Q
    |||||| |||||||||| |||||||  |||| ||||||||| ||   ||||||| |||||||||    
T  959517 ggattgattttgtcatctaaaaaggcctaacagcacaacttatttctcgcttgctttctattca 959454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 23 - 205
Target Start/End: Original strand, 33220774 - 33220956
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    ||||||| || ||||||||| | |||| ||||||||||||||||| ||| |||||||| |||| |||||||||  ||||| ||||||||||||||||||     
T  33220774 acactttcggcttcctagcatccgaggttgttgaccttctacatatagtccaaagggttatgcatagcaatgttgtgtcttctaggtccatgaatgttgc 33220873  T
Q  123 gtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaagtaa 205  Q
    ||||||||  |||||||||| ||||| ||||||| || |||| || ||| ||| |||||||||| ||||||||||||||||||    
T  33220874 gtttacgataattggttttgccatcctaaaaggtctagcggcgcagcttgttggccgcttgcctcctattcatgtgtaagtaa 33220956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 75 - 201
Target Start/End: Original strand, 3137362 - 3137488
Alignment:
Q  75 aagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaaaaaggtttaacggcacaacttttt 174  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| | |  |||||| ||    
T  3137362 aagggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgccatccaaaaaggcttagcagtgcaacttgtt 3137461  T
Q  175 gtccgcttgccttctattcatgtgtaa 201  Q
    | ||| |||||||| ||||||||||||    
T  3137462 gcccgtttgccttccattcatgtgtaa 3137488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 23 - 152
Target Start/End: Original strand, 4206659 - 4206788
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    ||||||| || |||||||||||||||| ||||||||||||||||| |||||||| |||||||| |  |||||||||||| |||||||| |||||| | ||    
T  4206659 acactttcgggttcctagcaccagaggttgttgaccttctacatagagttcaaaaggtcatgcatgacaatgtcatgtcacctaggtcaatgaatatagt 4206758  T
Q  123 gtttacgaggattggttttgtcatccaaaa 152  Q
    |||||||||||||||||||| |||||||||    
T  4206759 gtttacgaggattggttttgccatccaaaa 4206788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 23 - 194
Target Start/End: Complemental strand, 34304540 - 34304369
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    ||||||| || ||||||||| |||| | ||||||||||||||||| ||| ||||| || |||| ||||||| ||||||||| |||||| |||||||||||    
T  34304540 acactttgggcttcctagcatcagatgatgttgaccttctacatagagtccaaagagttatgcatagcaatatcatgtctcataggtctatgaatgttgt 34304441  T
Q  123 gtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattca 194  Q
     ||||||||||||| |||||  |||||||||||| || |||||||| || ||| |||  ||||| |||||||    
T  34304440 atttacgaggattgattttgcaatccaaaaaggtatagcggcacaaattgttgcccgtctgcctcctattca 34304369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 23 - 152
Target Start/End: Original strand, 4165985 - 4166114
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    ||||||| || |||||||||||||||| ||||||||||||||||| |||| ||| |||||||| |  |||||||||||| |||||||| || ||| | ||    
T  4165985 acactttcgggttcctagcaccagaggttgttgaccttctacatagagtttaaaaggtcatgcatgacaatgtcatgtcacctaggtcaataaatatagt 4166084  T
Q  123 gtttacgaggattggttttgtcatccaaaa 152  Q
    |||||||||||||||||||| |||||||||    
T  4166085 gtttacgaggattggttttgccatccaaaa 4166114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 48 - 156
Target Start/End: Complemental strand, 32115737 - 32115629
Alignment:
Q  48 ggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatc 147  Q
    |||||||||||||||||| | |||||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||| |||||  |||    
T  32115737 ggctgttgaccttctacaaagagttcaaaaggtcatgcataacaatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattgattttgctatc 32115638  T
Q  148 caaaaaggt 156  Q
     ||||||||    
T  32115637 taaaaaggt 32115629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 34 - 141
Target Start/End: Original strand, 29338153 - 29338260
Alignment:
Q  34 ttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgagga 133  Q
    |||||||||||||||   ||||||||||||||||  ||||||||||||||||  | |||||||||| |||||||||||||||||||||||||||| ||||    
T  29338153 ttcctagcaccagagatcgttgaccttctacatatggttcaaagggtcatgcacatcaatgtcatgactcctaggtccatgaatgttgtgtttacaagga 29338252  T
Q  134 ttggtttt 141  Q
    ||| ||||    
T  29338253 ttgatttt 29338260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 51 - 201
Target Start/End: Original strand, 28009078 - 28009228
Alignment:
Q  51 tgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaa 150  Q
    ||||||||||||  ||| ||||||||||||||| |  | |||||||||| |||||||||||||||| ||||| ||||| || |||| |||||  ||||||    
T  28009078 tgttgaccttctgtatatagttcaaagggtcatacacaacaatgtcatgactcctaggtccatgaacgttgtctttaccagaattgattttgcaatccaa 28009177  T
Q  151 aaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaa 201  Q
    |||||  ||||| | || ||| ||||||| |||||||||||||||||||||    
T  28009178 aaaggcctaacgacgcagcttattgtccgtttgccttctattcatgtgtaa 28009228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 34 - 155
Target Start/End: Original strand, 34554351 - 34554471
Alignment:
Q  34 ttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgagga 133  Q
    |||||||||||||| ||| ||||| ||||||||| |||| ||| |||||||  ||||||| ||||||||| || ||| |||||| |||||||||||||||    
T  34554351 ttcctagcaccagatgctattgactttctacatagagtttaaaaggtcatgtatagcaatatcatgtctcgtaagtc-atgaattttgtgtttacgagga 34554449  T
Q  134 ttggttttgtcatccaaaaagg 155  Q
    ||| ||||||||||||||||||    
T  34554450 ttgattttgtcatccaaaaagg 34554471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 33 - 201
Target Start/End: Complemental strand, 28625964 - 28625797
Alignment:
Q  33 tttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgagg 132  Q
    ||||||||||||||||| |||||| |||||||||| |||||||| |||||||| || | ||||||| |||| |||||| ||||||||||||||||||  |    
T  28625964 tttcctagcaccagaggttgttgagcttctacataaagttcaaaaggtcatgcataac-atgtcatatctcataggtctatgaatgttgtgtttacggag 28625866  T
Q  133 attggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaa 201  Q
    |||| ||||| ||| ||||||| | || |||| || ||| ||  ||| |||||||||||| | ||||||    
T  28625865 attgattttgccattcaaaaagatctagcggcgcagcttattacccgtttgccttctatttaagtgtaa 28625797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 90 - 201
Target Start/End: Complemental strand, 34168897 - 34168787
Alignment:
Q  90 caatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttct 189  Q
    |||||||||| ||||||| ||||||||||||||||| ||||||||||||||||  |||||||||||  || |||| |||||| | | |||||||||||||    
T  34168897 caatgtcatgactcctagatccatgaatgttgtgtt-acgaggattggttttgctatccaaaaaggcctagcggcgcaacttgtcgcccgcttgccttct 34168799  T
Q  190 attcatgtgtaa 201  Q
    ||||||||||||    
T  34168798 attcatgtgtaa 34168787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 23 - 102
Target Start/End: Original strand, 45740 - 45819
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtct 102  Q
    ||||||| |||||| |||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||| ||||||    
T  45740 acactttcggtttcttagcaccagaggctgttgaccttctacatagagttcaaaaggtcatgcatagcaatgttatgtct 45819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 22 - 205
Target Start/End: Original strand, 357779 - 357961
Alignment:
Q  22 aacacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttg 121  Q
    |||||||||| ||||||| ||  ||||| || |||||||||||||| ||| |||| | | | || ||||||||| || ||||||||||||||||||||||    
T  357779 aacacttttg-tttcctaacattagaggttgatgaccttctacatagagtccaaatgattaagcatagcaatgttatctctcctaggtccatgaatgttg 357877  T
Q  122 tgtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaagtaa 205  Q
    ||||||||| ||||  ||||| |||| ||||| || || ||||| | ||| ||||| | ||| || |||||||| |||||||||    
T  357878 tgtttacgaagattaattttgccatctaaaaatgtatagcggcatagcttgttgtcggtttgtctcctattcatatgtaagtaa 357961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 107 - 201
Target Start/End: Complemental strand, 7749441 - 7749347
Alignment:
Q  107 ggtccatgaatgttgtgtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaa 201  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||||||| || |||  || ||| ||| |||||||||| ||||||||||||||    
T  7749441 ggtccatgaatgttgtgtttacgaggattggttttgccatcctaaaaggtctagcggtgcagcttgttgcccgcttgcctcctattcatgtgtaa 7749347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 90 - 205
Target Start/End: Complemental strand, 28543374 - 28543259
Alignment:
Q  90 caatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttct 189  Q
    |||||| |||| |||||||||||| ||| || |||||| |||||||||||||| ||||  ||||| | || |||| |||||  |||||||||||||||||    
T  28543374 caatgttatgtttcctaggtccataaatattatgtttaagaggattggttttgccatctgaaaagatctagcggcgcaactaattgtccgcttgccttct 28543275  T
Q  190 attcatgtgtaagtaa 205  Q
    ||||||| ||||||||    
T  28543274 attcatgcgtaagtaa 28543259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 27 - 142
Target Start/End: Complemental strand, 24016377 - 24016262
Alignment:
Q  27 ttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgttt 126  Q
    ||||||||||||||||||||| | ||||||  || |||||| |||||||||||||||||  |  |||||||||||||||| || ||| ||| || |||||    
T  24016377 ttttggtttcctagcaccagatgttgttgattttttacatagagttcaaagggtcatgcacaagaatgtcatgtctcctaagtacataaatattatgttt 24016278  T
Q  127 acgaggattggttttg 142  Q
    ||||  ||||||||||    
T  24016277 acgataattggttttg 24016262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 27 - 154
Target Start/End: Original strand, 26225646 - 26225773
Alignment:
Q  27 ttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgttt 126  Q
    |||||| || ||||||| ||| | ||||| ||||| ||||| |||||||||| ||||||  || ||  | |||||| ||||||| ||| || ||||||||    
T  26225646 ttttggctttctagcactagatgttgttggccttcaacatagagttcaaaggctcatgcagagaaacattatgtcttctaggtcgatggattttgtgttt 26225745  T
Q  127 acgaggattggttttgtcatccaaaaag 154  Q
    | ||||||||||||||||||||||||||    
T  26225746 atgaggattggttttgtcatccaaaaag 26225773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 34 - 154
Target Start/End: Original strand, 13398256 - 13398376
Alignment:
Q  34 ttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgagga 133  Q
    |||||| || |||| | ||||||| ||||||||| |||||||| | | |||| || |||||||| | || |||| | ||| |||||||||||||||| |     
T  13398256 ttcctaacatcagaagttgttgacattctacatagagttcaaaagatgatgcataacaatgtcacgacttctagatgcataaatgttgtgtttacgatgg 13398355  T
Q  134 ttggttttgtcatccaaaaag 154  Q
    ||| |||||||||||||||||    
T  13398356 ttgattttgtcatccaaaaag 13398376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 23 - 99
Target Start/End: Complemental strand, 34415480 - 34415404
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatg 99  Q
    ||||||| ||||||||| ||||| | || |||||||||||| ||| |||||||| |||||||| |||||||||||||    
T  34415480 acactttaggtttcctaacaccaaatgcagttgaccttctatatagagttcaaatggtcatgcatagcaatgtcatg 34415404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 141
Target Start/End: Complemental strand, 3714961 - 3714843
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    |||||||||  ||| |||||||| || || |||| |||||||||| |||| ||||  ||||||  | |||||||||||||| ||  ||||||||||||||    
T  3714961 acacttttgacttcttagcaccaaagactcttgatcttctacatagagtttaaagaatcatgcacaacaatgtcatgtctcataaatccatgaatgttgt 3714862  T
Q  123 gtttacgaggattggtttt 141  Q
    |||| | ||||||| ||||    
T  3714861 gtttgcaaggattgatttt 3714843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 52 - 135
Target Start/End: Original strand, 7200627 - 7200710
Alignment:
Q  52 gttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggatt 135  Q
    ||||||||| |||||| | ||||||| ||||||| ||||||  | ||||||||||| || ||||||||||| ||||| ||||||    
T  7200627 gttgaccttttacataaatttcaaagagtcatgcatagcaacattatgtctcctagatcaatgaatgttgtatttacaaggatt 7200710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 133 - 194
Target Start/End: Original strand, 749501 - 749562
Alignment:
Q  133 attggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattca 194  Q
    |||| ||||| |||||||||| || | ||| |||| ||| ||||||||||||||||||||||    
T  749501 attgattttgccatccaaaaacgtctgacgacacagcttgttgtccgcttgccttctattca 749562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 97 - 141
Target Start/End: Original strand, 30514135 - 30514179
Alignment:
Q  97 atgtctcctaggtccatgaatgttgtgtttacgaggattggtttt 141  Q
    ||||||||||||||||| |||||| ||||||| | ||||||||||    
T  30514135 atgtctcctaggtccatcaatgttctgtttacaaagattggtttt 30514179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 99; Significance: 2e-48; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 23 - 205
Target Start/End: Complemental strand, 35310492 - 35310310
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    ||||||| || ||||| ||| ||||||||||| |||||||||||| ||| ||||||||  ||| || |||||| ||||||||||||||||||||||||||    
T  35310492 acactttcggcttcctggcatcagaggctgttaaccttctacatagagtccaaagggttttgcatatcaatgttatgtctcctaggtccatgaatgttgt 35310393  T
Q  123 gtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaagtaa 205  Q
    ||||||||| |||||||||| |||||||| |||||||||| | || ||| ||| |||||||||| ||||||||||||||||||    
T  35310392 gtttacgagaattggttttgccatccaaagaggtttaacgacgcagcttgttgcccgcttgcctcctattcatgtgtaagtaa 35310310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 23 - 205
Target Start/End: Complemental strand, 430646 - 430464
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    |||||||||  ||| ||||| ||||||| |||||||||||||||| | | |||||||| |||| ||| ||||| ||||||||||||||||||||||||||    
T  430646 acacttttgtcttcatagcatcagaggcagttgaccttctacatagattccaaagggttatgcatagtaatgttatgtctcctaggtccatgaatgttgt 430547  T
Q  123 gtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaagtaa 205  Q
    |||||||||||||| || || ||||||||||||| || |||  || ||| | ||| |||||||| ||||||||||| ||||||    
T  430546 gtttacgaggattgattatgccatccaaaaaggtctatcggtgcagcttgtngtctgcttgcctcctattcatgtgcaagtaa 430464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 38 - 153
Target Start/End: Original strand, 22188733 - 22188848
Alignment:
Q  38 tagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattgg 137  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||| || |||| ||||||||||||| | ||||||||||||||||||||| |||||    
T  22188733 tagcaccagaggctgttgaccttctacatagagttcaaaaggtcatgcataacaatatcatgtctcctagattcatgaatgttgtgtttacgagaattgg 22188832  T
Q  138 ttttgtcatccaaaaa 153  Q
    ||||||||||||||||    
T  22188833 ttttgtcatccaaaaa 22188848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 23 - 201
Target Start/End: Original strand, 13166973 - 13167151
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    ||||||| || ||||||||| ||||| |||||||||||||||||| ||| |||||||| |||| ||||||||  |||||||||||||||||||||||||     
T  13166973 acactttcggcttcctagcatcagagactgttgaccttctacatagagtccaaagggttatgcatagcaatggtatgtctcctaggtccatgaatgttgg 13167072  T
Q  123 gtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaa 201  Q
    |||||||| ||||| || ||| |||||||||| | || |||| || ||| ||| || ||||||| ||||||||||||||    
T  13167073 gtttacgatgattgattctgttatccaaaaagatctagcggcgcagcttgttgcccacttgcctcctattcatgtgtaa 13167151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 23 - 201
Target Start/End: Complemental strand, 42921741 - 42921564
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    ||||||| ||||||||||||||||||| ||||| ||||||||||| |||||| | |||||||| || ||||||||||||||||| |||||| ||| ||||    
T  42921741 acactttcggtttcctagcaccagaggttgttggccttctacatagagttcagaaggtcatgcataacaatgtcatgtctcctaagtccat-aatattgt 42921643  T
Q  123 gtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaa 201  Q
    |||||| ||||||||||||| ||||||||||| | || |||| || ||| ||  || ||||||||||||||| ||||||    
T  42921642 gtttacaaggattggttttgccatccaaaaagatctagcggcgcagcttgtttcccacttgccttctattcaagtgtaa 42921564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 33 - 153
Target Start/End: Original strand, 32269870 - 32269990
Alignment:
Q  33 tttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgagg 132  Q
    ||||||||||| ||||| |||||||||||| |||  |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  32269870 tttcctagcactagaggttgttgaccttctgcatgaagttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgagg 32269969  T
Q  133 attggttttgtcatccaaaaa 153  Q
    |||| ||| | ||||||||||    
T  32269970 attgatttcgccatccaaaaa 32269990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 59 - 187
Target Start/End: Original strand, 2566194 - 2566322
Alignment:
Q  59 ttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaaaaaggttt 158  Q
    ||||||||| |||||||| |||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||| ||||||||||||| |    
T  2566194 ttctacatagagttcaaaaggtcatgcatagcaatgtcatgtctcctagatccatcaatgttgtgtttacgaggattgattttgccatccaaaaaggtct 2566293  T
Q  159 aacggcacaactttttgtccgcttgcctt 187  Q
    | |||| |||||| ||| || ||||||||    
T  2566294 agcggcgcaacttgttgcccacttgcctt 2566322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 23 - 155
Target Start/End: Original strand, 37873701 - 37873833
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    |||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||  | |||||||||| || ||||||| |||||||||||    
T  37873701 acacttttggcttcctagcaccagaggttgttgaccttctacatagagttcaaagggtcatgcagaacaatgtcatgacttctaggtctatgaatgttgt 37873800  T
Q  123 gtttacgaggattggttttgtcatccaaaaagg 155  Q
    ||||| |||||||| |||||  ||| |||||||    
T  37873801 gtttaagaggattgattttgctatcaaaaaagg 37873833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 34 - 205
Target Start/End: Original strand, 25663106 - 25663277
Alignment:
Q  34 ttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgagga 133  Q
    ||||||||| |||| | |||||| |||||||||| ||| |||||||| |||| || |||||| ||||| ||||||||||||||||||| |||||||||||    
T  25663106 ttcctagcatcagaagttgttgatcttctacatagagtccaaagggttatgcatatcaatgttatgtcccctaggtccatgaatgttgagtttacgagga 25663205  T
Q  134 ttggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaagtaa 205  Q
    |||| |||||||||||||||||| ||||| | || ||| |||  || |||||| || || ||||||||||||    
T  25663206 ttggctttgtcatccaaaaaggtctaacgacgcagcttgttgctcgtttgcctcctttttatgtgtaagtaa 25663277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 41 - 197
Target Start/End: Complemental strand, 34335363 - 34335207
Alignment:
Q  41 caccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttt 140  Q
    ||||||||||||||||||||||||||| ||||||| || ||||||||| |||| |||||||||||||  |||| ||| |||||||||||| ||||| |||    
T  34335363 caccagaggctgttgaccttctacatagagttcaacggatcatgcgtaacaatctcatgtctcctagacccataaatattgtgtttacgatgattgattt 34335264  T
Q  141 tgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgt 197  Q
    ||||| | |||||    || ||||||||||| ||  |||||||| ||||||||||||    
T  34335263 tgtcacctaaaaacacctagcggcacaacttgttacccgcttgcattctattcatgt 34335207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 23 - 194
Target Start/End: Original strand, 15292089 - 15292259
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    |||||||| |||| ||||||| ||||| | |||| |||||||| | |||||||| |||||||| |||||||||||  |||||||||||||||||||||||    
T  15292089 acacttttagttttctagcactagaggttattgatcttctacaaa-agttcaaaaggtcatgcatagcaatgtcacatctcctaggtccatgaatgttgt 15292187  T
Q  123 gtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattca 194  Q
    ||||| |||||||| ||||| |||||||||| | ||  |||| ||  || ||| || |||||||||||||||    
T  15292188 gtttatgaggattgattttgccatccaaaaaagcttggcggcgcagtttgttgcccacttgccttctattca 15292259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 71 - 202
Target Start/End: Complemental strand, 23023591 - 23023460
Alignment:
Q  71 ttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaaaaaggtttaacggcacaact 170  Q
    |||||| |||||||| || ||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||  ||  ||| || ||    
T  23023591 ttcaaaaggtcatgcatatcaatgtcatgtctcctaggtcgatgaatgttgtgtttacgaagattgattttgtcatccaaaaaggcctaggggcgcatct 23023492  T
Q  171 ttttgtccgcttgccttctattcatgtgtaag 202  Q
    | ||||||| ||||||| |||| |||||||||    
T  23023491 tattgtccgtttgccttttatttatgtgtaag 23023460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 23 - 205
Target Start/End: Complemental strand, 27336737 - 27336557
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    |||||| ||| ||||||||| ||||||| |||||||||||||||| ||   ||| ||| |||  ||||||||| |||||||||| |||||||||||||||    
T  27336737 acacttgtggcttcctagcatcagaggcagttgaccttctacatagaga--aaatggttatgtatagcaatgttatgtctcctaagtccatgaatgttgt 27336640  T
Q  123 gtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaagtaa 205  Q
     ||||| ||||||| ||||| |||| |||||||| || |||  ||  || ||||||||||| || ||||||||||||||||||    
T  27336639 ttttacaaggattgattttgccatcaaaaaaggtctagcggtgcagtttattgtccgcttgtctcctattcatgtgtaagtaa 27336557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 34 - 139
Target Start/End: Complemental strand, 38875671 - 38875567
Alignment:
Q  34 ttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgagga 133  Q
    ||||||||||||||||||| ||||||||||| || |||||||| |||||||| || ||||||| ||||||||||||| ||| ||||||||||||||| ||    
T  38875671 ttcctagcaccagaggctgctgaccttctacgtagagttcaaaaggtcatgcataacaatgtcttgtctcctaggtcaatg-atgttgtgtttacgatga 38875573  T
Q  134 ttggtt 139  Q
    ||||||    
T  38875572 ttggtt 38875567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 23 - 205
Target Start/End: Original strand, 33692118 - 33692297
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    ||||||| || ||| ||||| ||||| ||||||||||||||||||  || |||||||| |||| || |||||| ||||||| ||||| |||||||||| |    
T  33692118 acactttcggcttcttagcatcagagactgttgaccttctacatagtgtccaaagggt-atgcataacaatgttatgtctcataggttcatgaatgttct 33692216  T
Q  123 gtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaagtaa 205  Q
    ||||||||   ||||||||  ||||||||||| | || |||| || ||| ||| | |||||||| ||||||||||||||||||    
T  33692217 gtttacgat--ttggtttttccatccaaaaagatctagcggcgcagcttgttgcctgcttgcctcctattcatgtgtaagtaa 33692297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 71 - 201
Target Start/End: Complemental strand, 24113571 - 24113441
Alignment:
Q  71 ttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaaaaaggtttaacggcacaact 170  Q
    |||||| | |||||| || ||||||||||||| ||||||||||||||||||| ||||| || ||||  ||| |||| ||||||||||||  |||||||||    
T  24113571 ttcaaatgatcatgcataacaatgtcatgtcttctaggtccatgaatgttgtttttacaagaattgactttatcattcaaaaaggtttagtggcacaact 24113472  T
Q  171 ttttgtccgcttgccttctattcatgtgtaa 201  Q
    | |||  || ||||||||||||||| |||||    
T  24113471 tgttgctcgtttgccttctattcatatgtaa 24113441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 32 - 142
Target Start/End: Original strand, 26212655 - 26212765
Alignment:
Q  32 gtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgag 131  Q
    ||||| |||||||||||||| || |||||||||||| ||||||||  ||||||  | ||||| | |||||||||| ||||||||||||||| || | |||    
T  26212655 gtttcttagcaccagaggctattaaccttctacatagagttcaaaatgtcatgtatggcaatattatgtctcctaagtccatgaatgttgttttcatgag 26212754  T
Q  132 gattggttttg 142  Q
    |||||||||||    
T  26212755 gattggttttg 26212765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 23 - 201
Target Start/End: Complemental strand, 15833103 - 15832928
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    |||||||||  |||||||||||||| | ||||||   |||| ||| |||||||| |||||||  || |||||||| ||||||||| | ||||||||| ||    
T  15833103 acacttttgacttcctagcaccagatgttgttga---tctatatagagttcaaatggtcatgtataacaatgtcacgtctcctagattcatgaatgtcgt 15833007  T
Q  123 gtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaa 201  Q
    ||| ||||||||| |||||| | |||  |||| | ||| ||| |||||| |||| |||||| ||| ||||||| |||||    
T  15833006 gttcacgaggattagttttgccttccttaaagatctaatggcgcaacttattgttcgcttgtcttttattcatctgtaa 15832928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 35 - 154
Target Start/End: Complemental strand, 14423714 - 14423600
Alignment:
Q  35 tcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggat 134  Q
    |||||||| |||||||||||||||||||||||| |||| |   ||| || | || |||||||||||||| ||||||||| |||  |||||| || |||||    
T  14423714 tcctagcatcagaggctgttgaccttctacatagagttaa---ggtaattcataacaatgtcatgtctcttaggtccataaat--tgtgttcacaaggat 14423620  T
Q  135 tggttttgtcatccaaaaag 154  Q
    |||||||| |||||||||||    
T  14423619 tggttttgccatccaaaaag 14423600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 33 - 142
Target Start/End: Complemental strand, 15810081 - 15809974
Alignment:
Q  33 tttcctagcaccagaggctgttgaccttctacatacagttcaaag-ggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgag 131  Q
    ||||||||||| ||||| |||||||||   | ||| ||||||||  |||||||  |||||||||||||||||||||| |||||||||| ||||| |||||    
T  15810081 tttcctagcacgagaggttgttgacct---atatagagttcaaaatggtcatgtatagcaatgtcatgtctcctaggcccatgaatgtcgtgttcacgag 15809985  T
Q  132 gattggttttg 142  Q
    ||||| |||||    
T  15809984 gattgattttg 15809974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 51 - 153
Target Start/End: Original strand, 23423962 - 23424064
Alignment:
Q  51 tgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaa 150  Q
    ||||||||||||||||| | |||||||| |||| | | |||||||||||| |||||  || || ||| ||||||||| || ||||| |||||||||||||    
T  23423962 tgttgaccttctacatagatttcaaaggatcattcattgcaatgtcatgtatcctacttctatcaatattgtgtttatgaagattgattttgtcatccaa 23424061  T
Q  151 aaa 153  Q
    |||    
T  23424062 aaa 23424064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 188
Target Start/End: Original strand, 15506742 - 15506843
Alignment:
Q  87 tagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgcct 186  Q
    |||||||||||||||||||||  | | ||||||||||||||||||||||| ||||  |||| |||||||  ||||||| |||||| |||  || ||||||    
T  15506742 tagcaatgtcatgtctcctagacctacgaatgttgtgtttacgaggattgattttaccatcaaaaaaggcctaacggcgcaacttgttgctcgtttgcct 15506841  T
Q  187 tc 188  Q
    ||    
T  15506842 tc 15506843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 159
Target Start/End: Complemental strand, 27294468 - 27294346
Alignment:
Q  37 ctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattg 136  Q
    ||||||||||||| ||||||||||||||||| |||||||| ||||| |  || |||  | |||||| |||||||||||||||   |||||| ||| | |     
T  27294468 ctagcaccagaggttgttgaccttctacatatagttcaaatggtcacgtataacaacattatgtcttctaggtccatgaatgagttgtttatgagaacta 27294369  T
Q  137 gttttgtcatccaaaaaggttta 159  Q
     ||||| |||| |||||||||||    
T  27294368 attttgccatctaaaaaggttta 27294346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 23 - 146
Target Start/End: Complemental strand, 7716225 - 7716105
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    ||||||||||||| ||||||||||||| |||||  ||| |||||| |||||||||| | |||| || |||| ||||||   ||  ||  ||||||||| |    
T  7716225 acacttttggttttctagcaccagaggttgttggtcttttacataaagttcaaaggattatgcataacaatatcatgt---ctttgtaaatgaatgttct 7716129  T
Q  123 gtttacgaggattggttttgtcat 146  Q
    |||||||| ||||| |||||||||    
T  7716128 gtttacgatgattgattttgtcat 7716105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 59 - 152
Target Start/End: Original strand, 22819737 - 22819830
Alignment:
Q  59 ttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaaaa 152  Q
    ||||||| ||||||||||| ||| ||| ||||||||| ||||||  ||  || |||||||||||||||| || ||||| ||||||||| |||||    
T  22819737 ttctacacacagttcaaagagtcgtgcatagcaatgttatgtctgttaaatctatgaatgttgtgtttatgaagattgattttgtcattcaaaa 22819830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 188
Target Start/End: Complemental strand, 11005825 - 11005757
Alignment:
Q  120 tgtgtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttc 188  Q
    ||||||||| ||||||||||||| |||||||||||| ||| |||| || ||| ||| ||||||||||||    
T  11005825 tgtgtttactaggattggttttgccatccaaaaaggcttagcggcgcagcttgttgcccgcttgccttc 11005757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 155
Target Start/End: Original strand, 26010277 - 26010408
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    ||||||||||||||||| ||||||||| | |||||||||||| || | |||||||| | |||| ||| | | |  |||||| ||| ||||| |||||| |    
T  26010277 acacttttggtttcctatcaccagaggttattgaccttctacgtaga-ttcaaaggattatgcatagaacttttgtgtctcttagatccataaatgttat 26010375  T
Q  123 gtttacgaggattggttttgtcatccaaaaagg 155  Q
     ||| |||| |||| ||||||||| ||||||||    
T  26010376 attttcgagaattgattttgtcatacaaaaagg 26010408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 45 - 153
Target Start/End: Complemental strand, 8100574 - 8100468
Alignment:
Q  45 agaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtc 144  Q
    ||||| |||||||||||||| || |||| ||||  |||||| || ||||||||||||| |||||| | | |||||||| ||| ||| ||||| ||||| |    
T  8100574 agaggttgttgaccttctacgtagagtttaaagattcatgcatatcaatgtcatgtcttctaggt-cgtaaatgttgt-tttgcgatgattgattttgcc 8100477  T
Q  145 atccaaaaa 153  Q
    |||||||||    
T  8100476 atccaaaaa 8100468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 53 - 141
Target Start/End: Complemental strand, 19260318 - 19260230
Alignment:
Q  53 ttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggtttt 141  Q
    |||||||||||| || ||||||||||||||| | || |||||| ||||||  ||  | |||||||||| ||||||||| |||| |||||    
T  19260318 ttgaccttctacttagagttcaaagggtcatacataacaatgtaatgtcttatatattcatgaatgttatgtttacgatgatttgtttt 19260230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 103 - 155
Target Start/End: Complemental strand, 34476005 - 34475953
Alignment:
Q  103 cctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaaaaagg 155  Q
    |||||||||||||||||||||||||||| ||||| ||||  | ||||||||||    
T  34476005 cctaggtccatgaatgttgtgtttacgaagattgttttttccgtccaaaaagg 34475953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 31 - 102
Target Start/End: Original strand, 41343509 - 41343581
Alignment:
Q  31 ggtttcctagcaccagaggctgttgaccttctacat-acagttcaaagggtcatgcgtagcaatgtcatgtct 102  Q
    ||||| ||||||||||||| ||||| |||||||||| | |||||||||| |||||| || |||| ||||||||    
T  41343509 ggttttctagcaccagaggttgttggccttctacataatagttcaaaggatcatgcataacaatatcatgtct 41343581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 124 - 205
Target Start/End: Original strand, 2917524 - 2917606
Alignment:
Q  124 tttacgaggattggtttt-gtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaagtaa 205  Q
    |||||||||||||||||| | ||||||||||||| || |||| ||  || ||| | |||||||| ||||||||||||| ||||    
T  2917524 tttacgaggattggtttttgccatccaaaaaggtctagcggcgcagtttgttgcctgcttgcctcctattcatgtgtaggtaa 2917606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 3114249 - 3114315
Alignment:
Q  69 agttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggatt 135  Q
    |||||||||||||||||  | |||||||||  |||| |||||  |||||||||||||||||| ||||    
T  3114249 agttcaaagggtcatgcacaacaatgtcataactccaaggtctgtgaatgttgtgtttacgaagatt 3114315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 115 - 201
Target Start/End: Complemental strand, 12033383 - 12033297
Alignment:
Q  115 aatgttgtgtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaa 201  Q
    |||||||||||||||| ||||||||||| ||||||||| | | ||||||  || ||| || ||| |||| |||||||| | ||||||    
T  12033383 aatgttgtgtttacgatgattggttttgccatccaaaatgatctaacggtgcagcttattatccacttgtcttctatttaagtgtaa 12033297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 141
Target Start/End: Original strand, 27355717 - 27355806
Alignment:
Q  52 gttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggtttt 141  Q
    |||||||||||||||| |||||||||  |||| | ||  |||||  |||||||||| |||||  | |||||||| ||||| |||||||||    
T  27355717 gttgaccttctacatagagttcaaagtctcatacataataatgtattgtctcctagatccatagaagttgtgttaacgagaattggtttt 27355806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 69 - 201
Target Start/End: Complemental strand, 16017171 - 16017039
Alignment:
Q  69 agttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaaaaaggtttaacggcacaa 168  Q
    |||||||| |||||||| |||||||||  ||||||||||||  |||  ||| || |||| || ||||| ||||| |||| ||||| | || ||||| ||     
T  16017171 agttcaaaaggtcatgcatagcaatgttgtgtctcctaggtttatgggtgtggtttttaagatgattgattttgccatctaaaaacggtttacggcgcag 16017072  T
Q  169 ctttttgtccgcttgccttctattcatgtgtaa 201  Q
    |||||||   || |||||| ||||| |||||||    
T  16017071 ctttttgatggcctgccttttattcctgtgtaa 16017039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 91; Significance: 9e-44; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 31 - 201
Target Start/End: Complemental strand, 33286 - 33116
Alignment:
Q  31 ggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacga 130  Q
    ||||||||| ||||||||| ||||||||||||||||| |||||||| |||||||| ||||||| | |||||||||||||||||||| || ||||||||||    
T  33286 ggtttcctaacaccagaggttgttgaccttctacatagagttcaaaaggtcatgcatagcaattttatgtctcctaggtccatgaacgtcgtgtttacga 33187  T
Q  131 ggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaa 201  Q
    |||||| |||||||||||||||||| ||  |||  || ||| ||| | |||||||||||||||| ||||||    
T  33186 ggattgattttgtcatccaaaaaggcttggcggtgcagcttgttgcctgcttgccttctattcaagtgtaa 33116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 80; Significance: 3e-37; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 23 - 122
Target Start/End: Complemental strand, 6378 - 6279
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    |||||||  |||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  6378 acactttcagtttcctagcaccagaggctgttgaccttctacatagagttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgt 6279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1768 (Bit Score: 75; Significance: 3e-34; HSPs: 1)
Name: scaffold1768
Description:

Target: scaffold1768; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 23 - 201
Target Start/End: Original strand, 247 - 425
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    ||||||||||||| |||| |||| ||| |||||||||||| |||| ||||||||  ||||| | ||||||||||||||||||||| || ||||| |||||    
T  247 acacttttggttttctagtaccaaaggttgttgaccttctgcataaagttcaaaaagtcatacatagcaatgtcatgtctcctagatcgatgaacgttgt 346  T
Q  123 gtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaa 201  Q
    ||||||||||||| |||||| |||||||||||| ||   ||| || ||| ||| | |||| ||||||||||| ||||||    
T  347 gtttacgaggattagttttgccatccaaaaaggctttgtggcgcatcttgttgccggctttccttctattcaagtgtaa 425  T

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Target: scaffold0470 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0470
Description:

Target: scaffold0470; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 23 - 167
Target Start/End: Complemental strand, 7646 - 7503
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    |||||||  |||||||||| ||||||  |||||||||| | ||||  ||||||| |||||||| ||  ||||||||||||| |||||||||||||||| |    
T  7646 acactttcagtttcctagctccagagattgttgaccttttgcatagcgttcaaaaggtcatgcatat-aatgtcatgtctcataggtccatgaatgttat 7548  T
Q  123 gtttacgaggattggttttgtcatccaaaaaggtttaacggcaca 167  Q
    ||||||||| |||||||||||||||||||||| | ||||||||||    
T  7547 gtttacgagtattggttttgtcatccaaaaagatctaacggcaca 7503  T

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Target: scaffold0119 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 23 - 156
Target Start/End: Complemental strand, 16149 - 16017
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgt 122  Q
    ||||||||||||||||||||||| ||| | ||||| ||||||||| ||||||||||||||||| ||| ||| |||||| ||||  ||| |||||| || |    
T  16149 acacttttggtttcctagcacca-aggttattgactttctacatagagttcaaagggtcatgcatagtaatatcatgtttcctgtgtctatgaatttttt 16051  T
Q  123 gtttacgaggattggttttgtcatccaaaaaggt 156  Q
    ||||| ||| |||| |||| | ||||||||||||    
T  16050 gtttatgagaattgattttataatccaaaaaggt 16017  T

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Target: scaffold0110 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 74 - 205
Target Start/End: Original strand, 47634 - 47765
Alignment:
Q  74 aaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttt 173  Q
    |||||| ||||| || |||||||| || || |||| ||||||||||| ||||||| | ||||| ||||  |||| ||||| ||||| ||||||||||| |    
T  47634 aaaggggcatgcataacaatgtcacgtttcataggcccatgaatgttatgtttacaaagattgattttaccatcgaaaaatgtttagcggcacaacttgt 47733  T
Q  174 tgtccgcttgccttctattcatgtgtaagtaa 205  Q
    |||||| ||| |||||||||| ||||||||||    
T  47734 tgtccgtttgtcttctattcacgtgtaagtaa 47765  T

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Target: scaffold0031 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 63 - 195
Target Start/End: Complemental strand, 49419 - 49287
Alignment:
Q  63 acatacagttcaaagggtcatgcgtagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaaaaaggtttaacg 162  Q
    ||||| |||||||||| |||||| || |||||||||||||| || |||||||||||| || |||||||| |||| ||||  |||| |||| ||| || ||    
T  49419 acatagagttcaaaggatcatgcataacaatgtcatgtctcttatgtccatgaatgtagtatttacgagaattgatttttccatctaaaacggtctagcg 49320  T
Q  163 gcacaactttttgtccgcttgccttctattcat 195  Q
    || |||||| |||   |||||||||||| ||||    
T  49319 gcgcaacttgttgctagcttgccttctaatcat 49287  T

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Target: scaffold0406 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 118 - 201
Target Start/End: Complemental strand, 6837 - 6754
Alignment:
Q  118 gttgtgtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaa 201  Q
    |||||||||||||| |||||||||| ||||||||||||| || || | || ||| ||| |||||||||||||||||| ||||||    
T  6837 gttgtgtttacgagaattggttttgccatccaaaaaggtctagcgccgcagcttgttgcccgcttgccttctattcaagtgtaa 6754  T

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Target: scaffold0309 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 115 - 201
Target Start/End: Complemental strand, 5276 - 5190
Alignment:
Q  115 aatgttgtgtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattcatgtgtaa 201  Q
    ||||||||||| ||||||||||  |||| ||||||||||||| || |||| || ||| ||| |||||||| ||||||||| ||||||    
T  5276 aatgttgtgttcacgaggattgactttgccatccaaaaaggtctagcggcgcagcttgttgcccgcttgcattctattcaagtgtaa 5190  T

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Target: scaffold0514 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 147
Target Start/End: Original strand, 4378 - 4434
Alignment:
Q  91 aatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatc 147  Q
    ||||||||||||| || |||||| ||||||||||||||||  |||||||||||||||    
T  4378 aatgtcatgtctcataagtccataaatgttgtgtttacgaatattggttttgtcatc 4434  T

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Target: scaffold0186 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 99
Target Start/End: Complemental strand, 10404 - 10329
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatg 99  Q
    |||||| ||| |||||||||||||||| ||||||||||||| ||| |||| |||||| ||||| || ||||||||||    
T  10404 acacttgtggcttcctagcaccagaggttgttgaccttcta-atagagttgaaagggccatgcataacaatgtcatg 10329  T

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Target: scaffold0361 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 193
Target Start/End: Original strand, 17415 - 17510
Alignment:
Q  98 tgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactttttgtccgcttgccttctattc 193  Q
    |||||| ||||||||||||||||||||||| || ||||| |||||  ||||||| ||  ||| |||||||| || ||  |||||||| ||| ||||    
T  17415 tgtctcttaggtccatgaatgttgtgtttaagatgattgcttttgctatccaaatagagttagcggcacaagttatttcccgcttgctttccattc 17510  T

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Target: scaffold0013 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 171
Target Start/End: Original strand, 52663 - 52727
Alignment:
Q  106 aggtccatgaatgttgtgtttacgaggattggttttgtcatccaaaaaggtttaacggcacaactt 171  Q
    |||||||||||| ||||||||| || |||| ||||||| ||||||||| |||||||| | ||||||    
T  52663 aggtccatgaatattgtgtttatgaagattagttttgttatccaaaaa-gtttaacgacgcaactt 52727  T

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Target: scaffold0224 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 95
Target Start/End: Original strand, 18427 - 18499
Alignment:
Q  23 acacttttggtttcctagcaccagaggctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgt 95  Q
    ||||||||| ||||| ||||  ||||  |||| |||||||||||| |||| ||||||||||||  ||||||||    
T  18427 acacttttgatttccaagcagtagagattgttaaccttctacatagagtttaaagggtcatgcagagcaatgt 18499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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