View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15444_low_18 (Length: 204)

Name: NF15444_low_18
Description: NF15444
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15444_low_18
NF15444_low_18
[»] chr3 (54 HSPs)
chr3 (3-133)||(10811182-10811313)
chr3 (1-133)||(9753263-9753396)
chr3 (7-130)||(28700511-28700635)
chr3 (3-133)||(48346873-48347004)
chr3 (1-133)||(13778477-13778610)
chr3 (1-84)||(53870975-53871059)
chr3 (39-133)||(27089866-27089960)
chr3 (64-133)||(53870754-53870823)
chr3 (1-68)||(6178384-6178452)
chr3 (1-68)||(50314669-50314737)
chr3 (1-69)||(55151675-55151743)
chr3 (3-69)||(55361191-55361258)
chr3 (3-64)||(288772-288834)
chr3 (3-134)||(13348027-13348159)
chr3 (11-84)||(22237201-22237275)
chr3 (3-84)||(34456837-34456919)
chr3 (3-64)||(38926674-38926736)
chr3 (27-97)||(39738924-39738994)
chr3 (1-130)||(41443087-41443217)
chr3 (3-64)||(41505537-41505599)
chr3 (3-61)||(49761354-49761412)
chr3 (3-64)||(52254101-52254163)
chr3 (1-61)||(27541468-27541529)
chr3 (1-54)||(33375905-33375958)
chr3 (1-69)||(45711397-45711466)
chr3 (27-68)||(51982170-51982211)
chr3 (3-134)||(4494129-4494261)
chr3 (3-67)||(8821677-8821741)
chr3 (1-49)||(32767721-32767769)
chr3 (3-68)||(37894200-37894267)
chr3 (1-49)||(44677462-44677510)
chr3 (3-61)||(5244275-5244334)
chr3 (3-83)||(44413866-44413945)
chr3 (1-60)||(51343453-51343512)
chr3 (3-64)||(35597208-35597270)
chr3 (3-68)||(42358597-42358663)
chr3 (7-68)||(390860-390921)
chr3 (3-131)||(9692772-9692901)
chr3 (3-51)||(26452698-26452747)
chr3 (3-67)||(40554843-40554910)
chr3 (9-65)||(1340143-1340198)
chr3 (1-68)||(1796004-1796072)
chr3 (1-73)||(3648624-3648695)
chr3 (1-84)||(8502833-8502917)
chr3 (1-49)||(22371236-22371284)
chr3 (3-51)||(24095382-24095430)
chr3 (3-134)||(34307433-34307565)
chr3 (3-51)||(37927181-37927229)
chr3 (4-47)||(39629818-39629862)
chr3 (3-51)||(39697198-39697246)
chr3 (5-68)||(44813406-44813470)
chr3 (3-51)||(46019509-46019557)
chr3 (3-133)||(46965994-46966125)
chr3 (3-51)||(55400046-55400094)
[»] chr4 (49 HSPs)
chr4 (1-129)||(56557778-56557905)
chr4 (3-133)||(37060364-37060493)
chr4 (3-97)||(149414-149509)
chr4 (3-127)||(18518351-18518476)
chr4 (1-131)||(52204895-52205026)
chr4 (37-133)||(47744406-47744502)
chr4 (3-130)||(5386419-5386547)
chr4 (1-64)||(37297093-37297157)
chr4 (1-64)||(40348838-40348902)
chr4 (3-133)||(47099069-47099197)
chr4 (3-134)||(54000745-54000877)
chr4 (34-133)||(2401689-2401788)
chr4 (3-68)||(5249915-5249981)
chr4 (3-68)||(24575810-24575876)
chr4 (3-83)||(27051030-27051111)
chr4 (3-84)||(29227185-29227267)
chr4 (4-69)||(24045292-24045356)
chr4 (3-68)||(28458336-28458401)
chr4 (3-134)||(18315984-18316116)
chr4 (3-51)||(28657417-28657465)
chr4 (4-68)||(40693583-40693646)
chr4 (1-68)||(42853621-42853689)
chr4 (3-61)||(10250481-10250540)
chr4 (3-54)||(30079893-30079944)
chr4 (3-133)||(39344874-39345004)
chr4 (3-49)||(42490955-42491002)
chr4 (91-133)||(9362572-9362614)
chr4 (4-69)||(19232091-19232157)
chr4 (3-49)||(30169998-30170044)
chr4 (7-68)||(37997304-37997366)
chr4 (3-64)||(43175030-43175092)
chr4 (3-68)||(49585041-49585107)
chr4 (3-83)||(50721688-50721769)
chr4 (3-68)||(31657693-31657758)
chr4 (1-69)||(52430922-52430991)
chr4 (11-68)||(53801718-53801774)
chr4 (1-68)||(56474726-56474790)
chr4 (1-49)||(9118842-9118890)
chr4 (3-47)||(21617230-21617274)
chr4 (1-68)||(31559583-31559651)
chr4 (1-68)||(31574898-31574966)
chr4 (3-51)||(32696228-32696276)
chr4 (1-60)||(36177950-36178010)
chr4 (3-51)||(38338898-38338946)
chr4 (1-60)||(38510738-38510798)
chr4 (3-134)||(39158152-39158284)
chr4 (1-64)||(39440528-39440592)
chr4 (3-51)||(51573608-51573656)
chr4 (3-130)||(51577661-51577789)
[»] chr2 (46 HSPs)
chr2 (1-133)||(38821411-38821542)
chr2 (3-133)||(2144766-2144898)
chr2 (3-133)||(40504271-40504404)
chr2 (3-133)||(40635761-40635894)
chr2 (7-133)||(4228829-4228959)
chr2 (41-133)||(40443135-40443227)
chr2 (27-131)||(31548380-31548484)
chr2 (34-134)||(6511449-6511549)
chr2 (3-133)||(28245775-28245904)
chr2 (34-133)||(6646902-6647001)
chr2 (3-134)||(37316707-37316839)
chr2 (1-68)||(44977458-44977526)
chr2 (1-67)||(41195628-41195695)
chr2 (1-133)||(14255347-14255480)
chr2 (35-133)||(32972798-32972896)
chr2 (1-83)||(35705539-35705621)
chr2 (27-105)||(38911851-38911929)
chr2 (1-69)||(34215309-34215378)
chr2 (3-134)||(36587363-36587493)
chr2 (3-68)||(23690467-23690534)
chr2 (3-51)||(40937040-40937088)
chr2 (3-51)||(42678796-42678844)
chr2 (34-133)||(2971708-2971807)
chr2 (3-61)||(9207636-9207695)
chr2 (3-69)||(9647178-9647245)
chr2 (3-53)||(9760064-9760115)
chr2 (1-68)||(10711769-10711836)
chr2 (3-61)||(18254175-18254234)
chr2 (3-54)||(26277142-26277193)
chr2 (4-133)||(44050063-44050192)
chr2 (27-68)||(7664025-7664066)
chr2 (7-67)||(41042304-41042365)
chr2 (37-134)||(44239118-44239215)
chr2 (3-51)||(2221040-2221088)
chr2 (7-51)||(5054659-5054703)
chr2 (3-51)||(6999044-6999092)
chr2 (3-51)||(12889808-12889856)
chr2 (3-51)||(13347791-13347839)
chr2 (3-51)||(18723641-18723689)
chr2 (7-51)||(25086372-25086416)
chr2 (3-51)||(25881591-25881639)
chr2 (7-130)||(31578485-31578609)
chr2 (3-47)||(34119632-34119676)
chr2 (3-51)||(36802943-36802991)
chr2 (1-84)||(37731142-37731226)
chr2 (7-51)||(42866801-42866845)
[»] chr8 (39 HSPs)
chr8 (1-155)||(33604953-33605104)
chr8 (3-133)||(12284163-12284294)
chr8 (3-133)||(39211088-39211219)
chr8 (56-131)||(4312649-4312724)
chr8 (34-133)||(3946319-3946418)
chr8 (3-133)||(30439400-30439530)
chr8 (3-51)||(33451539-33451587)
chr8 (4-133)||(10839376-10839506)
chr8 (34-133)||(32954919-32955018)
chr8 (63-117)||(5771804-5771858)
chr8 (1-134)||(17775316-17775450)
chr8 (1-134)||(44090931-44091065)
chr8 (27-68)||(29025331-29025372)
chr8 (1-61)||(6991774-6991834)
chr8 (3-83)||(7472970-7473050)
chr8 (5-49)||(7478829-7478873)
chr8 (7-134)||(25987679-25987807)
chr8 (3-51)||(34718162-34718210)
chr8 (3-51)||(41159865-41159913)
chr8 (1-48)||(9549178-9549225)
chr8 (3-61)||(35067207-35067266)
chr8 (3-69)||(36660408-36660475)
chr8 (3-49)||(1633868-1633914)
chr8 (7-64)||(5277462-5277520)
chr8 (1-51)||(5277680-5277730)
chr8 (7-68)||(5740744-5740806)
chr8 (3-68)||(10902751-10902817)
chr8 (3-68)||(11253501-11253567)
chr8 (3-68)||(25830204-25830270)
chr8 (3-49)||(45529224-45529270)
chr8 (1-61)||(22719484-22719545)
chr8 (3-47)||(11017852-11017896)
chr8 (1-68)||(12734970-12735038)
chr8 (7-51)||(16613685-16613729)
chr8 (1-60)||(31249491-31249551)
chr8 (1-64)||(32501159-32501223)
chr8 (1-84)||(34435679-34435763)
chr8 (7-51)||(36568009-36568053)
chr8 (3-134)||(44061764-44061896)
[»] chr5 (34 HSPs)
chr5 (5-133)||(29463044-29463173)
chr5 (3-133)||(14532551-14532682)
chr5 (3-133)||(31683389-31683520)
chr5 (34-133)||(8920157-8920256)
chr5 (49-133)||(15884644-15884728)
chr5 (3-64)||(36738994-36739056)
chr5 (3-49)||(37700507-37700553)
chr5 (1-66)||(39591724-39591790)
chr5 (1-66)||(39592116-39592182)
chr5 (1-133)||(8675327-8675459)
chr5 (1-69)||(18660803-18660872)
chr5 (3-133)||(19839880-19840010)
chr5 (3-68)||(20770178-20770243)
chr5 (3-68)||(35098964-35099029)
chr5 (1-64)||(22649624-22649688)
chr5 (3-51)||(41175682-41175730)
chr5 (3-131)||(33599009-33599137)
chr5 (3-49)||(18842299-18842345)
chr5 (3-68)||(22098302-22098368)
chr5 (3-64)||(35646429-35646491)
chr5 (3-68)||(41321301-41321367)
chr5 (56-133)||(54801-54878)
chr5 (1-61)||(7076534-7076595)
chr5 (11-67)||(33958219-33958276)
chr5 (7-67)||(35649948-35650008)
chr5 (5-49)||(42225745-42225790)
chr5 (3-51)||(189679-189727)
chr5 (3-68)||(2972369-2972436)
chr5 (3-51)||(3640173-3640221)
chr5 (3-51)||(6517759-6517807)
chr5 (3-134)||(13089674-13089806)
chr5 (1-68)||(13461809-13461877)
chr5 (3-51)||(43196601-43196649)
chr5 (3-51)||(43441785-43441833)
[»] chr7 (42 HSPs)
chr7 (7-133)||(41650758-41650883)
chr7 (1-133)||(31674949-31675082)
chr7 (1-89)||(24532880-24532969)
chr7 (3-68)||(41189502-41189568)
chr7 (3-84)||(47448873-47448955)
chr7 (12-124)||(2300139-2300252)
chr7 (3-130)||(13152639-13152768)
chr7 (37-134)||(28249462-28249559)
chr7 (3-131)||(45419956-45420085)
chr7 (3-130)||(34978343-34978471)
chr7 (7-102)||(49128905-49129001)
chr7 (4-67)||(20454293-20454356)
chr7 (34-133)||(31711830-31711929)
chr7 (34-133)||(33224902-33225001)
chr7 (34-133)||(37899402-37899501)
chr7 (3-84)||(43081832-43081914)
chr7 (1-133)||(10055526-10055658)
chr7 (3-108)||(31785388-31785496)
chr7 (2-66)||(32952411-32952476)
chr7 (4-51)||(4292475-4292523)
chr7 (3-51)||(11564940-11564988)
chr7 (3-133)||(28036791-28036921)
chr7 (34-133)||(37899106-37899205)
chr7 (1-51)||(40854630-40854681)
chr7 (92-134)||(1504253-1504294)
chr7 (1-47)||(33180690-33180736)
chr7 (1-54)||(36703844-36703898)
chr7 (7-88)||(38344811-38344893)
chr7 (3-49)||(39231706-39231752)
chr7 (3-60)||(43942683-43942741)
chr7 (3-64)||(44189273-44189335)
chr7 (3-49)||(47078229-47078275)
chr7 (3-68)||(48062103-48062169)
chr7 (1-68)||(34108817-34108881)
chr7 (3-131)||(44184455-44184583)
chr7 (37-136)||(1258534-1258634)
chr7 (3-51)||(7817684-7817731)
chr7 (3-66)||(17002383-17002447)
chr7 (7-51)||(21559849-21559893)
chr7 (9-68)||(27568070-27568130)
chr7 (1-49)||(32815213-32815261)
chr7 (3-51)||(35452549-35452597)
[»] chr1 (56 HSPs)
chr1 (37-131)||(19055518-19055612)
chr1 (27-134)||(611528-611635)
chr1 (56-133)||(47990222-47990300)
chr1 (3-134)||(45008056-45008188)
chr1 (3-68)||(9566919-9566985)
chr1 (3-67)||(14983819-14983884)
chr1 (3-134)||(47642499-47642631)
chr1 (3-134)||(48858870-48859002)
chr1 (3-65)||(50775118-50775181)
chr1 (3-64)||(649815-649877)
chr1 (13-134)||(19442568-19442690)
chr1 (1-133)||(44517855-44517988)
chr1 (1-69)||(15083008-15083077)
chr1 (1-68)||(8846018-8846086)
chr1 (7-67)||(49647110-49647170)
chr1 (3-51)||(52362529-52362577)
chr1 (1-68)||(26837497-26837564)
chr1 (34-133)||(45065795-45065894)
chr1 (1-68)||(46172366-46172433)
chr1 (11-69)||(49065322-49065381)
chr1 (1-68)||(50824786-50824853)
chr1 (3-64)||(4213119-4213181)
chr1 (3-84)||(4857957-4858039)
chr1 (91-133)||(12128000-12128042)
chr1 (3-49)||(21486295-21486341)
chr1 (3-68)||(29877344-29877410)
chr1 (3-64)||(35369746-35369808)
chr1 (1-133)||(37139821-37139949)
chr1 (1-51)||(40316920-40316970)
chr1 (3-84)||(40439782-40439864)
chr1 (3-49)||(44632575-44632621)
chr1 (1-51)||(46543418-46543468)
chr1 (3-133)||(47214255-47214384)
chr1 (11-68)||(48261194-48261252)
chr1 (3-133)||(51286262-51286391)
chr1 (3-60)||(3558893-3558949)
chr1 (3-48)||(9008272-9008317)
chr1 (3-63)||(12657268-12657329)
chr1 (3-83)||(12999766-12999847)
chr1 (1-46)||(29586038-29586083)
chr1 (3-68)||(36954704-36954768)
chr1 (27-131)||(44257430-44257534)
chr1 (1-49)||(3024728-3024776)
chr1 (3-51)||(8200122-8200170)
chr1 (3-47)||(8411698-8411742)
chr1 (3-51)||(10890022-10890070)
chr1 (3-51)||(13489709-13489757)
chr1 (3-51)||(18336193-18336241)
chr1 (3-51)||(19969538-19969586)
chr1 (3-51)||(33054064-33054112)
chr1 (3-51)||(34040476-34040524)
chr1 (7-134)||(41070873-41071001)
chr1 (3-51)||(48220120-48220168)
chr1 (3-51)||(48624923-48624971)
chr1 (3-51)||(50781546-50781594)
chr1 (3-46)||(51718607-51718651)
[»] scaffold0343 (1 HSPs)
scaffold0343 (3-133)||(8887-9017)
[»] chr6 (23 HSPs)
chr6 (1-68)||(26595393-26595461)
chr6 (3-130)||(8645355-8645483)
chr6 (3-64)||(5080530-5080592)
chr6 (3-133)||(20822763-20822892)
chr6 (3-68)||(22079522-22079588)
chr6 (73-134)||(10053051-10053112)
chr6 (3-83)||(13423015-13423096)
chr6 (3-68)||(21968851-21968916)
chr6 (56-133)||(34850737-34850814)
chr6 (1-49)||(11547507-11547555)
chr6 (3-66)||(17551339-17551403)
chr6 (3-133)||(13143276-13143406)
chr6 (3-61)||(25811804-25811863)
chr6 (3-133)||(35213455-35213585)
chr6 (3-83)||(3853251-3853332)
chr6 (7-64)||(8098560-8098618)
chr6 (3-67)||(34047433-34047498)
chr6 (3-47)||(2075431-2075475)
chr6 (3-47)||(4820298-4820342)
chr6 (3-51)||(18141277-18141325)
chr6 (37-134)||(20661889-20661988)
chr6 (7-51)||(28041790-28041834)
chr6 (1-61)||(34442029-34442089)
[»] scaffold0618 (1 HSPs)
scaffold0618 (1-134)||(8845-8979)
[»] scaffold0034 (1 HSPs)
scaffold0034 (34-132)||(22657-22755)
[»] scaffold0128 (1 HSPs)
scaffold0128 (3-134)||(10983-11113)
[»] scaffold0532 (1 HSPs)
scaffold0532 (3-47)||(11011-11055)
[»] scaffold0519 (1 HSPs)
scaffold0519 (3-68)||(11827-11894)


Alignment Details
Target: chr3 (Bit Score: 108; Significance: 2e-54; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 3 - 133
Target Start/End: Original strand, 10811182 - 10811313
Alignment:
Q  3 tttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtcccaaa 101  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||    
T  10811182 tttctctctcatactcacattgtgtttttaccttctctctctattgctttggtatttgtgtcaatactcatatttctttgtatatttaggttgtcccaaa 10811281  T
Q  102 agttatcaacaaaaatggttgttcaaataaca 133  Q
    |||| |||||||||||||||||||||||||||    
T  10811282 agttgtcaacaaaaatggttgttcaaataaca 10811313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 9753263 - 9753396
Alignment:
Q  1 attttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtccca 99  Q
    ||||| |||||||||||||||||||||||| |  |||||| ||||||| ||| || |||||||||| |||||||| ||||||||| |||| |||||||||    
T  9753263 attttatctctcatactcacattgtgtttttattttctctatctattgttttggtttttgtgtcaacactcatatatctttgtatatttaggttgtccca 9753362  T
Q  100 aaagttatcaacaaaaatggttgttcaaataaca 133  Q
     ||||| |||||||||||| ||||||||||||||    
T  9753363 caagttgtcaacaaaaatgattgttcaaataaca 9753396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 7 - 130
Target Start/End: Original strand, 28700511 - 28700635
Alignment:
Q  7 tctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtcccaaaagtt 105  Q
    ||||||||||||||||| |||||| || |||||||||||||||||| || |||||| |||||||||| |||||||||||  ||||||||||||||| |||    
T  28700511 tctctcatactcacattatgtttttactttctctctctattgctttggtttttgtgccaatactcatctttctttgtatacttaagttgtcccaaaggtt 28700610  T
Q  106 atcaacaaaaatggttgttcaaata 130  Q
      |||||||||||| ||||||||||    
T  28700611 ggcaacaaaaatggatgttcaaata 28700635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 3 - 133
Target Start/End: Original strand, 48346873 - 48347004
Alignment:
Q  3 tttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtcccaaa 101  Q
    ||||||| ||||||| | ||| |||||| || |||||||||||||||||| || |||||||||||| |||||||||||||||| |||| ||||||||| |    
T  48346873 tttctctttcatacttatattttgtttttactttctctctctattgctttggtttttgtgtcaatattcatatttctttgtatatttaggttgtcccaca 48346972  T
Q  102 agttatcaacaaaaatggttgttcaaataaca 133  Q
    | || ||||||||||| |||||||||||||||    
T  48346973 aattgtcaacaaaaatagttgttcaaataaca 48347004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 13778477 - 13778610
Alignment:
Q  1 attttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtccca 99  Q
    ||||||| |||||||||||||||| ||||| || ||||||| |||||| ||| || ||| ||||||||||||||||||||||||| ||||  ||||| ||    
T  13778477 attttctttctcatactcacattgagtttttactttctctcgctattgttttggtctttatgtcaatactcatatttctttgtatatttagattgtctca 13778576  T
Q  100 aaagttatcaacaaaaatggttgttcaaataaca 133  Q
     || || |||||||||||||||||||||||||||    
T  13778577 caaattgtcaacaaaaatggttgttcaaataaca 13778610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 53871059 - 53870975
Alignment:
Q  1 attttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtcaatactcatatttctttgtat 84  Q
    ||||||||||||||| ||||||| |||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  53871059 attttctctctcatattcacattttgtttttaccttctctctctattgctttggtatttgtgccaatactcatatttctttgtat 53870975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 39 - 133
Target Start/End: Complemental strand, 27089960 - 27089866
Alignment:
Q  39 tctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtcccaaaagttatcaacaaaaatggttgttcaaataaca 133  Q
    ||||||||||||| || ||||| ||||||||||||||||||||||| ||||  |||||||| || || |||||||||||||||||||||||||||    
T  27089960 tctctattgctttggtttttgtatcaatactcatatttctttgtatatttagattgtcccagaaattgtcaacaaaaatggttgttcaaataaca 27089866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 64 - 133
Target Start/End: Complemental strand, 53870823 - 53870754
Alignment:
Q  64 aatactcatatttctttgtatgtttaagttgtcccaaaagttatcaacaaaaatggttgttcaaataaca 133  Q
    |||||||||||||| |||||| |||||||||| ||||||||| ||||||||||||||| |||||||||||    
T  53870823 aatactcatatttcattgtatatttaagttgttccaaaagttgtcaacaaaaatggttattcaaataaca 53870754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 6178452 - 6178384
Alignment:
Q  1 attttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtcaatac 68  Q
    ||||||||||||||||||||||| |||||| || ||||||||||||||||||  | |||||||||||||    
T  6178452 attttctctctcatactcacattatgtttttactttctctctctattgctttgatttttgtgtcaatac 6178384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 50314669 - 50314737
Alignment:
Q  1 attttctctctcatactcacattgtg-ttttaccttctctctctattgctttagtatttgtgtcaatac 68  Q
    ||||||||||||||||||||||| || |||||| ||||||||||||| ||||  | |||||||||||||    
T  50314669 attttctctctcatactcacattatgtttttactttctctctctattactttgatttttgtgtcaatac 50314737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 55151743 - 55151675
Alignment:
Q  1 attttctctctcatactcacattgtgttttaccttctctctctattgctttagtatttgtgtcaatact 69  Q
    ||||| |||||||||||| |||| | |||||| ||||||||||| |||||| || ||||||||||||||    
T  55151743 attttatctctcatactctcattatcttttactttctctctctagtgctttggtttttgtgtcaatact 55151675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 55361258 - 55361191
Alignment:
Q  3 tttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtcaatact 69  Q
    ||||||||| ||||||||||| | |||| || |||||||||||||||||| || ||||||||||||||    
T  55361258 tttctctcttatactcacattatttttttactttctctctctattgctttggtttttgtgtcaatact 55361191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 288772 - 288834
Alignment:
Q  3 tttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtca 64  Q
    ||||||||||||||||||||| | |||| || |||||||||||||||||| || |||||||||    
T  288772 tttctctctcatactcacattatttttttactttctctctctattgctttggtttttgtgtca 288834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 134
Target Start/End: Complemental strand, 13348159 - 13348027
Alignment:
Q  3 tttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtcaatac-tcatatttctttgtatg-tttaagttgtccca 99  Q
    |||||||  |||||||||| | |||||| ||||||||||||||||||||| || ||||| ||||||| |||| ||||||||||   |||  |||||||||    
T  13348159 tttctcttccatactcacaatatgtttttaccttctctctctattgctttggtttttgtatcaatacctcat-tttctttgtaaaattttggttgtccca 13348061  T
Q  100 aaagttatcaacaaaaatggttgttcaaataacat 134  Q
    |||||| |||  | |||||| ||||||||||||||    
T  13348060 aaagttgtcat-ataaatggatgttcaaataacat 13348027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 11 - 84
Target Start/End: Original strand, 22237201 - 22237275
Alignment:
Q  11 tcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtcaatactcatatttctttgtat 84  Q
    ||||| |||||||||||||| || |||||||||||||  |||||| |||||||||||||  || |||||||||||    
T  22237201 tcatattcacattgtgtttttactttctctctctattattttagtttttgtgtcaatacgaatttttctttgtat 22237275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 84
Target Start/End: Original strand, 34456837 - 34456919
Alignment:
Q  3 tttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtcaatactcatatttctttgtat 84  Q
    ||||||||||||||||| ||| | |||| || ||||||||||||||||||| | |||||| ||||||  | ||||||||||||    
T  34456837 tttctctctcatactcatattatctttttactttctctctctattgctttaatttttgtgccaatacctaaatttctttgtat 34456919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 38926674 - 38926736
Alignment:
Q  3 tttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtca 64  Q
    ||||||||||||||||||||| | |||| || |||||||||||||||||| || |||||||||    
T  38926674 tttctctctcatactcacattatctttttactttctctctctattgctttggtttttgtgtca 38926736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 27 - 97
Target Start/End: Original strand, 39738924 - 39738994
Alignment:
Q  27 ttttaccttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtcc 97  Q
    |||||| || ||| |||||||||||||  ||||||  ||||||||||||||||||||| |||| |||||||    
T  39738924 ttttactttttctttctattgctttagattttgtgcaaatactcatatttctttgtatatttaggttgtcc 39738994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 41443217 - 41443087
Alignment:
Q  1 attttctctctcatactcacattgtg-ttttaccttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtccca 99  Q
    ||||||||||||||||||||||| |  |||||| |||||||||||||| |||  | ||||||  |||||  | ||||||||||||  || |||||||| |    
T  41443217 attttctctctcatactcacattattcttttactttctctctctattgttttgatttttgtgcaaatacctaaatttctttgtataatttagttgtccaa 41443118  T
Q  100 aaagttatcaacaaaaatggttgttcaaata 130  Q
    || ||| |||  | ||||| |||||||||||    
T  41443117 aaggttgtcacaagaaatgattgttcaaata 41443087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 41505537 - 41505599
Alignment:
Q  3 tttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtca 64  Q
    ||||||||||||||||||||| | |||| || |||||||||||||||||| || |||||||||    
T  41505537 tttctctctcatactcacattatctttttactttctctctctattgctttggtttttgtgtca 41505599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 49761354 - 49761412
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgctttagtatttgtg 61  Q
    ||||||||||||||||||||| | |||||| || ||||||||||||||| || ||||||    
T  49761354 tttctctctcatactcacattattttttactttatctctctattgctttggtttttgtg 49761412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 52254163 - 52254101
Alignment:
Q  3 tttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtca 64  Q
    |||||||||||||||| |||||| |||| || |||||||||||||||||| || |||||||||    
T  52254163 tttctctctcatactcgcattgtctttttactttctctctctattgctttggtttttgtgtca 52254101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 27541529 - 27541468
Alignment:
Q  1 attttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtg 61  Q
    ||||||||||||||||||||||| | |||| || |||||||||||||||||| || ||||||    
T  27541529 attttctctctcatactcacattatctttttactttctctctctattgctttggtttttgtg 27541468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 33375905 - 33375958
Alignment:
Q  1 attttctctctcatactcacattgtgttttaccttctctctctattgctttagt 54  Q
    ||||||||||||||||||||||| | |||||| || ||||||||||||| ||||    
T  33375905 attttctctctcatactcacattattttttactttatctctctattgctatagt 33375958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 45711466 - 45711397
Alignment:
Q  1 attttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtcaatact 69  Q
    ||||||||||||||||||||||| | |||| || |||||||||||||| ||| ||  |||||||||||||    
T  45711466 attttctctctcatactcacattatctttttactttctctctctattgttttggttattgtgtcaatact 45711397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 68
Target Start/End: Original strand, 51982170 - 51982211
Alignment:
Q  27 ttttaccttctctctctattgctttagtatttgtgtcaatac 68  Q
    |||||| ||||||||||||||||||||| |||||||||||||    
T  51982170 ttttactttctctctctattgctttagtttttgtgtcaatac 51982211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 134
Target Start/End: Complemental strand, 4494261 - 4494129
Alignment:
Q  3 tttctctctcatactcacattgtg-ttttaccttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtcccaaa 101  Q
    ||||||||| ||||||||||  |  |||||| |||||| |||||||||||  | ||||||||| |||  | ||||||||||||  ||  ||||||| | |    
T  4494261 tttctctcttatactcacatcatcattttactttctctttctattgctttgatttttgtgtcactacctaaatttctttgtataatttggttgtccaaca 4494162  T
Q  102 agttatcaacaaaaatggttgttcaaataacat 134  Q
    |||| |||  | |||||||||||||||||||||    
T  4494161 agttgtcataagaaatggttgttcaaataacat 4494129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 8821677 - 8821741
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgctttagtatttgtgtcaata 67  Q
    ||||||||||||||||||||| | |||||| || ||||||||||||| | || | ||||||||||    
T  8821677 tttctctctcatactcacattattttttactttatctctctattgctatggtttctgtgtcaata 8821741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 32767721 - 32767769
Alignment:
Q  1 attttctctctcatactcacattgtgttttaccttctctctctattgct 49  Q
    ||||||||||||||||||||||| | |||||| || |||||||||||||    
T  32767721 attttctctctcatactcacattattttttactttatctctctattgct 32767769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 37894267 - 37894200
Alignment:
Q  3 tttctctctcatactcacattg--tgttttaccttctctctctattgctttagtatttgtgtcaatac 68  Q
    |||||||||||||||||||||   | |||||| ||||||||||||| ||||  |||||||||||||||    
T  37894267 tttctctctcatactcacattacattttttactttctctctctattactttgatatttgtgtcaatac 37894200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 44677510 - 44677462
Alignment:
Q  1 attttctctctcatactcacattgtgttttaccttctctctctattgct 49  Q
    ||||||||||||||||||||||| | |||||| || |||||||||||||    
T  44677510 attttctctctcatactcacattattttttactttatctctctattgct 44677462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 5244275 - 5244334
Alignment:
Q  3 tttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtg 61  Q
    ||||||||||||||||||||| | |||| || |||||||||||||||||| || ||||||    
T  5244275 tttctctctcatactcacattatttttttactttctctctctattgctttggtttttgtg 5244334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 44413945 - 44413866
Alignment:
Q  3 tttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtcaata-ctcatatttctttgta 83  Q
    ||||||||||||||||||||| | |||| |||||||||||  |||||||| || |||||||||||| ||||| ||||||||||    
T  44413945 tttctctctcatactcacattatctttttaccttctctct--attgctttggtttttgtgtcaatatctcat-tttctttgta 44413866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 51343453 - 51343512
Alignment:
Q  1 attttctctctcatactcacattgtgttttaccttctctctctattgctttagtatttgt 60  Q
    ||||||||||||||||| ||||| | |||||  || |||||||||||||||||| |||||    
T  51343453 attttctctctcatacttacattatcttttaatttatctctctattgctttagtttttgt 51343512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 35597208 - 35597270
Alignment:
Q  3 tttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtca 64  Q
    ||||||||||||||||||||| | |||| || |||||||||||||| ||| || |||||||||    
T  35597208 tttctctctcatactcacattatttttttactttctctctctattgttttggtttttgtgtca 35597270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 42358663 - 42358597
Alignment:
Q  3 tttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtcaatac 68  Q
    ||||||||||||||||||||| | |||| || || |||||||||||||||  | |||||||||||||    
T  42358663 tttctctctcatactcacattatctttttactttatctctctattgctttgatttttgtgtcaatac 42358597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 390860 - 390921
Alignment:
Q  7 tctctcatactcacattgtgttttaccttctctctctattgctttagtatttgtgtcaatac 68  Q
    ||||||||||||||||| | |||||| || ||||||||||||| |||| |  ||||||||||    
T  390860 tctctcatactcacattattttttactttatctctctattgctatagtttccgtgtcaatac 390921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 131
Target Start/End: Original strand, 9692772 - 9692901
Alignment:
Q  3 tttctctctcatactcacattgtg-ttttaccttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtcccaaa 101  Q
    ||||||||||||| ||||||| |  |||||| ||||||||||||||||||  | ||||||||| | |  |  |||||||||||  || |||||||  |||    
T  9692772 tttctctctcatattcacattatcattttactttctctctctattgctttgatttttgtgtcactgcctaactttctttgtataatttagttgtctaaaa 9692871  T
Q  102 agttatcaacaaaaatggttgttcaaataa 131  Q
     ||| |||  | ||||||||||||||||||    
T  9692872 ggttgtcacaagaaatggttgttcaaataa 9692901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 26452747 - 26452698
Alignment:
Q  3 tttctctctcatactcacattgtgtttt-accttctctctctattgcttt 51  Q
    ||||||||||||||||||||| | |||| || ||||||||||||||||||    
T  26452747 tttctctctcatactcacattatatttttactttctctctctattgcttt 26452698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 40554910 - 40554843
Alignment:
Q  3 tttctctctcatactcacattgtgttttacctt---ctctctctattgctttagtatttgtgtcaata 67  Q
    ||||||||| ||| ||||||||||||||  |||   |||| |||||||||||||| ||||||||||||    
T  40554910 tttctctcttataatcacattgtgtttttactttttctctttctattgctttagtttttgtgtcaata 40554843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 1340198 - 1340143
Alignment:
Q  9 tctcatactcacattgtgttttaccttctctctctattgctttagtatttgtgtcaa 65  Q
    |||||||||||||||||||||| | || |||||||||||||||  | ||||||||||    
T  1340198 tctcatactcacattgtgtttt-cattttctctctattgctttgatttttgtgtcaa 1340143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 1796072 - 1796004
Alignment:
Q  1 attttctctctcatactcacattgtg-ttttaccttctctctctattgctttagtatttgtgtcaatac 68  Q
    ||||||||||||||  ||||||| || |||||| |||||||| ||||| |||||| ||||||| |||||    
T  1796072 attttctctctcatgttcacattatgtttttacattctctctttattgttttagtttttgtgttaatac 1796004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 3648624 - 3648695
Alignment:
Q  1 attttctctctcatactcacattgtgttttaccttctctctctattgctttagtatttgtgtcaatactcata 73  Q
    ||||||||||||||| ||||||||| ||||  ||| | ||||||||| |||  | ||||||||||||||||||    
T  3648624 attttctctctcatattcacattgtatttttactt-tatctctattgttttgatttttgtgtcaatactcata 3648695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 8502917 - 8502833
Alignment:
Q  1 attttctctctcatactcacattgtgtt-ttaccttctctctctattgctttagtatttgtgtcaatactcatatttctttgtat 84  Q
    ||||| |||||| |||||| |||||||| |||| ||||||||||||||||||  | ||| | |||||||  | ||||||||||||    
T  8502917 attttatctctcttactcatattgtgttcttactttctctctctattgctttgatttttatctcaatacataaatttctttgtat 8502833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 22371236 - 22371284
Alignment:
Q  1 attttctctctcatactcacattgtgttttaccttctctctctattgct 49  Q
    ||||||||||||||||| ||||| | |||||| || |||||||||||||    
T  22371236 attttctctctcatacttacattattttttactttatctctctattgct 22371284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 24095430 - 24095382
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgcttt 51  Q
    ||||||||||||||||||||| | |||||| || | |||||||||||||    
T  24095430 tttctctctcatactcacattattttttactttatttctctattgcttt 24095382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 134
Target Start/End: Complemental strand, 34307565 - 34307433
Alignment:
Q  3 tttctctctcatactcacattgtgttt-taccttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtcccaaa 101  Q
    ||||||| |||||||||||||||  || ||| |||||| ||||||||||| || ||||| ||| |||  | ||||||||||||  ||  ||||||| | |    
T  34307565 tttctctttcatactcacattgttcttctactttctctttctattgctttggtttttgtatcactacctaaatttctttgtataatttggttgtccaata 34307466  T
Q  102 agttatcaacaaaaatggttgttcaaataacat 134  Q
    |||| |||  | ||| | |||||||||||||||    
T  34307465 agttgtcacaagaaaggattgttcaaataacat 34307433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 37927229 - 37927181
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgcttt 51  Q
    ||||||||||||||||||||  | |||||| || |||||||||||||||    
T  37927229 tttctctctcatactcacataattttttactttatctctctattgcttt 37927181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 39629862 - 39629818
Alignment:
Q  4 ttctctctcatactcacattgtg-ttttaccttctctctctattg 47  Q
    |||||||||||||||||||| || |||||| ||||||||||||||    
T  39629862 ttctctctcatactcacattatgtttttactttctctctctattg 39629818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 39697246 - 39697198
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgcttt 51  Q
    |||||||||||||||||||||   |||||| || |||||||||||||||    
T  39697246 tttctctctcatactcacattactttttactttatctctctattgcttt 39697198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 44813470 - 44813406
Alignment:
Q  5 tctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtcaatac 68  Q
    ||||||||||||||||||| | |||| || || ||||||||||||||| || || ||||||||||    
T  44813470 tctctctcatactcacattatatttttactttatctctctattgctttggttttcgtgtcaatac 44813406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 46019509 - 46019557
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgcttt 51  Q
    |||||||||||||||||||||   |||||| || |||||||||||||||    
T  46019509 tttctctctcatactcacattactttttactttatctctctattgcttt 46019557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 133
Target Start/End: Complemental strand, 46966125 - 46965994
Alignment:
Q  3 tttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaag-ttgtcccaa 100  Q
    ||||| |||||||||||| || |||||| || |||||| ||||||| ||| || || ||||| |||   || ||||||||||  |||| | |||||| ||    
T  46966125 tttctttctcatactcacgttatgtttttactttctctatctattgttttggttttcgtgtcgatatctatctttctttgtaaatttatgattgtccgaa 46966026  T
Q  101 aagttatcaacaaaaatggttgttcaaataaca 133  Q
    ||||| ||| || ||||||||||||||||||||    
T  46966025 aagttgtca-cacaaatggttgttcaaataaca 46965994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 55400046 - 55400094
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgcttt 51  Q
    |||||||||||||||||||||   |||||| || |||||||||||||||    
T  55400046 tttctctctcatactcacattactttttactttatctctctattgcttt 55400094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 87; Significance: 7e-42; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 56557778 - 56557905
Alignment:
Q  1 attttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtccca 99  Q
    |||||||||||||||||||||||||||||| ||||||||  ||||||||||| ||||||||| |||||||||||||||||| ||| |||| |||||||||    
T  56557778 attttctctctcatactcacattgtgtttttaccttctc--tctattgctttggtatttgtgccaatactcatatttctttctatatttaggttgtccca 56557875  T
Q  100 aaagttatcaacaaaaatggttgttcaaat 129  Q
    |||||| |||||||||||||||||||||||    
T  56557876 aaagttgtcaacaaaaatggttgttcaaat 56557905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 3 - 133
Target Start/End: Original strand, 37060364 - 37060493
Alignment:
Q  3 tttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtcccaaa 101  Q
    ||||||||||||| ||||||| | |||| ||||||||  ||||||||||| ||  || |||||||| |||| ||||||||||  |||| |||||| ||||    
T  37060364 tttctctctcatattcacattatatttttaccttctc--tctattgctttggttcttatgtcaatattcatttttctttgtaaatttaggttgtctcaaa 37060461  T
Q  102 agttatcaacaaaaatggttgttcaaataaca 133  Q
    |||| ||||||||||||||| |||||||||||    
T  37060462 agttgtcaacaaaaatggttattcaaataaca 37060493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 149509 - 149414
Alignment:
Q  3 tttctctctcatactcacattgtgttttacctt-ctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtcc 97  Q
    ||||||||||||||||||||| ||||| | ||| ||||||||||||||||||| ||||||||| |||  | |||||||||||| ||| ||||||||    
T  149509 tttctctctcatactcacattatgtttcaactttctctctctattgctttagtttttgtgtcactacctaaatttctttgtatattttagttgtcc 149414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 127
Target Start/End: Complemental strand, 18518476 - 18518351
Alignment:
Q  3 tttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtcccaaa 101  Q
    ||||||||||||| ||||||||| |||| |  |||||| ||||||| ||| || ||||| || |||||||| ||||||||||| |||| ||||||||| |    
T  18518476 tttctctctcatattcacattgtatttttattttctctttctattgttttggtgtttgtatcgatactcatgtttctttgtatatttaggttgtcccaca 18518377  T
Q  102 agttatcaacaaaaatggttgttcaa 127  Q
    |||  | ||||||||| |||||||||    
T  18518376 agtcgttaacaaaaattgttgttcaa 18518351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 52204895 - 52205026
Alignment:
Q  1 attttctctctcatactcacattgtgttt-taccttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtccca 99  Q
    ||||||||| ||||||||||||||| ||| ||| ||||||||||||||||||  | ||||||||| |||| | |||||||| |||  ||  ||||||| |    
T  52204895 attttctctttcatactcacattgtttttctactttctctctctattgctttgatttttgtgtcactacttaaatttctttttataatttggttgtccaa 52204994  T
Q  100 aaagttatcaacaaaaatggttgttcaaataa 131  Q
     |||||||||  | ||| | ||||||||||||    
T  52204995 caagttatcataagaaaagattgttcaaataa 52205026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 133
Target Start/End: Complemental strand, 47744502 - 47744406
Alignment:
Q  37 tctctctattgctttagtatttgtgtcaatactcatatttctttgtatgttta-agttgtcccaaaagttatcaacaaaaatggttgttcaaataaca 133  Q
    |||||||||||||||||| |||||  ||||| |||| ||||||||||   |||  ||||||||||||||||||||  ||||| |||||||||||||||    
T  47744502 tctctctattgctttagtttttgtaccaata-tcatttttctttgtaaaattatggttgtcccaaaagttatcaatcaaaatagttgttcaaataaca 47744406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 130
Target Start/End: Original strand, 5386419 - 5386547
Alignment:
Q  3 tttctctctcatactcacattgtg-ttttaccttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtcccaaa 101  Q
    ||||||||||||||||||||| |  |||||| ||||||||||||||||||  | ||||||| | ||   | ||||||||||||  || |||||||  |||    
T  5386419 tttctctctcatactcacattattcttttactttctctctctattgctttgatttttgtgttactatctaaatttctttgtataatttagttgtctaaaa 5386518  T
Q  102 agttatcaacaaaaatggttgttcaaata 130  Q
    |||| |||  | |||||||||||||||||    
T  5386519 agttgtcacaagaaatggttgttcaaata 5386547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 37297093 - 37297157
Alignment:
Q  1 attttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtca 64  Q
    ||||||||||||||||||||||| | |||| || |||||||||||||||||| || |||||||||    
T  37297093 attttctctctcatactcacattatctttttactttctctctctattgctttggtttttgtgtca 37297157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 40348838 - 40348902
Alignment:
Q  1 attttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtca 64  Q
    ||||||||||||||||||||||| | |||| || |||||||||||||||||| || |||||||||    
T  40348838 attttctctctcatactcacattatctttttactttctctctctattgctttggtttttgtgtca 40348902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 133
Target Start/End: Original strand, 47099069 - 47099197
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgctttagtatttgtgtcaatactcatattt-ctttgtatgtttaagttgtcccaaa 101  Q
    |||||||| ||||||||||||   |||||| || ||||||||||||||| ||  | |||  |||||| |||||| |||||||  ||   |||||||||||    
T  47099069 tttctctcacatactcacattactttttactttatctctctattgctttggt--tcgtgcaaatactaatattttctttgtaaattatggttgtcccaaa 47099166  T
Q  102 agttatcaacaaaaatggttgttcaaataaca 133  Q
    ||||||||||  ||||||||||||||||||||    
T  47099167 agttatcaac-caaatggttgttcaaataaca 47099197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 134
Target Start/End: Original strand, 54000745 - 54000877
Alignment:
Q  3 tttctctctcatactcacattgtg-ttttaccttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtcccaaa 101  Q
    ||||||||||||||||||||| |  |||||| ||||||||||||||||| | | | |||| || |||  | ||||||||||||  || |||||||| |||    
T  54000745 tttctctctcatactcacattatcattttactttctctctctattgcttaaatttgtgtgccactacctaaatttctttgtataatttagttgtccaaaa 54000844  T
Q  102 agttatcaacaaaaatggttgttcaaataacat 134  Q
     ||| |||  | |||| ||||||||||||||||    
T  54000845 ggttgtcacaataaatagttgttcaaataacat 54000877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 133
Target Start/End: Original strand, 2401689 - 2401788
Alignment:
Q  34 ttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtcccaaaagttatcaacaaaaatggttgttcaaataaca 133  Q
    |||||||||||||||||| || |||||| ||| ||||| |||||||  ||| |||  ||||||||| ||||| ||    |||||||||||||||||||||    
T  2401689 ttctctctctattgctttggtttttgtgccaagactcacatttcttactatattttggttgtcccacaagttgtcctacaaaatggttgttcaaataaca 2401788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 5249915 - 5249981
Alignment:
Q  3 tttctctctcatactcacattgtg-ttttaccttctctctctattgctttagtatttgtgtcaatac 68  Q
    ||||||||||||||||||||| || |||||| |||||||||||||| ||| || || ||||||||||    
T  5249915 tttctctctcatactcacattatgtttttactttctctctctattgttttggttttcgtgtcaatac 5249981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 24575876 - 24575810
Alignment:
Q  3 tttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtcaatac 68  Q
    ||||||||||||||| ||||||| |||| || |||||||||||||||||| || |||||| ||||||    
T  24575876 tttctctctcatacttacattgtctttttactttctctctctattgctttggtttttgtgccaatac 24575810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 27051111 - 27051030
Alignment:
Q  3 tttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtcaata-ctcatatttctttgta 83  Q
    ||||||||||||||||||||| | |||| ||||||||||| ||||| ||| || |||||||||||| ||||| ||||||||||    
T  27051111 tttctctctcatactcacattatctttttaccttctctctttattgttttggtttttgtgtcaatatctcat-tttctttgta 27051030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 84
Target Start/End: Complemental strand, 29227267 - 29227185
Alignment:
Q  3 tttctctctcatactcacattgtgttt-taccttctctctctattgctttagtatttgtgtcaatactcatatttctttgtat 84  Q
    |||||||||||||| ||||||||  || ||| ||||||||||||||||||  ||||||||||| |||  | ||||||||||||    
T  29227267 tttctctctcatacacacattgttcttctactttctctctctattgctttgatatttgtgtcactacctaaatttctttgtat 29227185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 24045292 - 24045356
Alignment:
Q  4 ttctctctcatactcacattgtgttttaccttctctctctattgctttagtatttgtgtcaatact 69  Q
    |||||||||||||||||||| ||||||  ||| |||||||||||||||  | ||||||||||||||    
T  24045292 ttctctctcatactcacattatgtttttactt-tctctctattgctttgatttttgtgtcaatact 24045356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 28458401 - 28458336
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgctttagtatttgtgtcaatac 68  Q
    ||||||||||||||||||||| | |||||| || |||||||||||||||  | || ||||||||||    
T  28458401 tttctctctcatactcacattattttttactttatctctctattgctttgattttcgtgtcaatac 28458336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 134
Target Start/End: Original strand, 18315984 - 18316116
Alignment:
Q  3 tttctctctcatactcacattgtg-ttttaccttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtcccaaa 101  Q
    ||||||||| ||||||||||  |  |||||| |||||| |||||||||||  | ||||||||| |||  | ||||||||||||  ||  ||||||| | |    
T  18315984 tttctctcttatactcacatcatcattttactttctctttctattgctttgatttttgtgtcactacctaaatttctttgtataatttggttgtccaaca 18316083  T
Q  102 agttatcaacaaaaatggttgttcaaataacat 134  Q
    |||| |||  | |||||||||||||||||||||    
T  18316084 agttgtcataagaaatggttgttcaaataacat 18316116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 28657465 - 28657417
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgcttt 51  Q
    ||||||||||||||||||||| | |||||| || |||||||||||||||    
T  28657465 tttctctctcatactcacattattttttactttatctctctattgcttt 28657417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 40693646 - 40693583
Alignment:
Q  4 ttctctctcatactcacattgtgttttaccttctctctctattgctttagtatttgtgtcaatac 68  Q
    |||||||||||||||||||| ||||||  ||| |||||||||||||||| | |||||| ||||||    
T  40693646 ttctctctcatactcacattatgtttttactt-tctctctattgctttaatttttgtgccaatac 40693583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 42853621 - 42853689
Alignment:
Q  1 attttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtcaatac 68  Q
    ||||| ||||| ||||||| ||| |||||| || |||||||||||||||||| || |||||||||||||    
T  42853621 attttatctcttatactcatattatgttttcactttctctctctattgctttggtttttgtgtcaatac 42853689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 10250540 - 10250481
Alignment:
Q  3 tttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtg 61  Q
    ||||||||||||||||||||| | |||| || |||||||||||||||||| || ||||||    
T  10250540 tttctctctcatactcacattatctttttactttctctctctattgctttggtttttgtg 10250481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 30079893 - 30079944
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgctttagt 54  Q
    ||||||||||||||||||||| | |||||| || ||||||||||||| ||||    
T  30079893 tttctctctcatactcacattattttttactttatctctctattgctatagt 30079944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 133
Target Start/End: Complemental strand, 39345004 - 39344874
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgctttagtatttgtgtcaatactca-tatttctttgtatgtttaagttgtcccaaa 101  Q
    |||||||||||||||||||||   |||||| || ||||||||||||||| || || |||  |||||  | | ||||||||||  ||    ||||| ||||    
T  39345004 tttctctctcatactcacattactttttactttatctctctattgctttggttttcgtgcaaataccaattttttctttgtaaattatgattgtctcaaa 39344905  T
Q  102 agttatcaacaaaaatggttgttcaaataaca 133  Q
    ||||||||||  ||||||||||||||||||||    
T  39344904 agttatcaac-caaatggttgttcaaataaca 39344874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 42490955 - 42491002
Alignment:
Q  3 tttctctctcatactcacattgtg-ttttaccttctctctctattgct 49  Q
    ||||||||||||||||||||| || |||||| ||||||||||||||||    
T  42490955 tttctctctcatactcacattatgtttttactttctctctctattgct 42491002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 133
Target Start/End: Complemental strand, 9362614 - 9362572
Alignment:
Q  91 gttgtcccaaaagttatcaacaaaaatggttgttcaaataaca 133  Q
    |||||| |||||||||||||| ||| |||||||||||||||||    
T  9362614 gttgtcacaaaagttatcaactaaattggttgttcaaataaca 9362572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 19232157 - 19232091
Alignment:
Q  4 ttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtcaatact 69  Q
    |||||||||||||||||||| | |||| || ||||||||||||||||||  | |||||| |||||||    
T  19232157 ttctctctcatactcacattatatttttactttctctctctattgctttgatttttgtgccaatact 19232091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 30170044 - 30169998
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgct 49  Q
    ||||||||||||||||||||| | |||||| || |||||||||||||    
T  30170044 tttctctctcatactcacattattttttactttatctctctattgct 30169998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 37997304 - 37997366
Alignment:
Q  7 tctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtcaatac 68  Q
    ||||||||||||||||| | |||| || ||||||||||||||||||  | |||||||||||||    
T  37997304 tctctcatactcacattatctttttactttctctctctattgctttgatttttgtgtcaatac 37997366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 43175030 - 43175092
Alignment:
Q  3 tttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtca 64  Q
    ||||||||||||||||||||| | |||| || |||||||||||| ||||| || |||||||||    
T  43175030 tttctctctcatactcacattatttttttactttctctctctatggctttggtttttgtgtca 43175092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 49585041 - 49585107
Alignment:
Q  3 tttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtcaatac 68  Q
    ||||||||||||||||||||| | |||| || ||||||||||||| ||||  |||||||| ||||||    
T  49585041 tttctctctcatactcacattatatttttactttctctctctattactttgatatttgtgccaatac 49585107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 50721769 - 50721688
Alignment:
Q  3 tttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtcaat-actcatatttctttgta 83  Q
    ||||||| ||||||||||||| | |||| || ||||||||||| |||||| || ||||||||||| |||||| ||||||||||    
T  50721769 tttctctttcatactcacattatatttttactttctctctctactgctttggtttttgtgtcaatcactcat-tttctttgta 50721688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 31657693 - 31657758
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgctttagtatttgtgtcaatac 68  Q
    |||||||||||||||||||||   |||||| || ||||||||||||||| || || |||| |||||    
T  31657693 tttctctctcatactcacattactttttactttatctctctattgctttggttttcgtgtaaatac 31657758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 52430922 - 52430991
Alignment:
Q  1 attttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtcaatact 69  Q
    |||||||||||| |||||| ||| |||||| ||||| ||||||||||  ||| || ||||||||||||||    
T  52430922 attttctctctcgtactcatattatgtttttaccttgtctctctattattttggtttttgtgtcaatact 52430991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 53801774 - 53801718
Alignment:
Q  11 tcatactcacattgtgttttaccttctctctctattgctttagtatttgtgtcaatac 68  Q
    ||||||||||||| | ||||  ||| |||||||||||||||||| |||||||||||||    
T  53801774 tcatactcacattatctttttactt-tctctctattgctttagtttttgtgtcaatac 53801718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 56474790 - 56474726
Alignment:
Q  1 attttctctctcatactcacattgtgttttaccttctctctctattgctttagtatttgtgtcaatac 68  Q
    ||||||||||| ||||||||||| ||||||   | |||||||||||| ||| || |||||||||||||    
T  56474790 attttctctcttatactcacattatgtttt---tactctctctattgttttggtttttgtgtcaatac 56474726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 9118890 - 9118842
Alignment:
Q  1 attttctctctcatactcacattgtgttttaccttctctctctattgct 49  Q
    ||||||||||||||| ||||||| | |||||| || |||||||||||||    
T  9118890 attttctctctcataatcacattattttttactttatctctctattgct 9118842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 21617230 - 21617274
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattg 47  Q
    ||||||||||||||||||||| | |||||| || |||||||||||    
T  21617230 tttctctctcatactcacattattttttactttatctctctattg 21617274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 31559583 - 31559651
Alignment:
Q  1 attttctctctcatactcacattgt-gttttaccttctctctctattgctttagtatttgtgtcaatac 68  Q
    ||||||||||||||||||||||| |  |||||| |||||||||||||| ||| || || |||| |||||    
T  31559583 attttctctctcatactcacattatatttttactttctctctctattgttttggttttcgtgttaatac 31559651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 31574966 - 31574898
Alignment:
Q  1 attttctctctcatactcacattgt-gttttaccttctctctctattgctttagtatttgtgtcaatac 68  Q
    ||||||||||||||||||||||| |  |||||  ||||||||||||||||||  | ||||| |||||||    
T  31574966 attttctctctcatactcacattatatttttattttctctctctattgctttgatttttgtatcaatac 31574898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 32696228 - 32696276
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgcttt 51  Q
    ||||||||||||| ||||||||| |||||| || ||||| |||||||||    
T  32696228 tttctctctcatattcacattgttttttactttatctctttattgcttt 32696276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 36177950 - 36178010
Alignment:
Q  1 attttctctctcatactcacattgt-gttttaccttctctctctattgctttagtatttgt 60  Q
    ||||||||||||||||||||||| |  |||||| |||| ||||||||||||| || |||||    
T  36177950 attttctctctcatactcacattatctttttactttctttctctattgctttggtttttgt 36178010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 38338946 - 38338898
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgcttt 51  Q
    |||||||||||||||||||||   |||||| || |||||||||||||||    
T  38338946 tttctctctcatactcacattactttttactttatctctctattgcttt 38338898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 38510798 - 38510738
Alignment:
Q  1 attttctctctcatactcacattgtgttttacctt-ctctctctattgctttagtatttgt 60  Q
    ||||| ||||||||||||||||| | |||||  || ||||||||||||||||||| |||||    
T  38510798 attttatctctcatactcacattatcttttaattttctctctctattgctttagtttttgt 38510738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 134
Target Start/End: Original strand, 39158152 - 39158284
Alignment:
Q  3 tttctctctcatactcacattgtgttt-taccttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtcccaaa 101  Q
    ||||||||||||||||||||| |  || ||| |||||| ||||||| ||| || |||||| |  |||  | ||||||||||||  ||  ||||||| | |    
T  39158152 tttctctctcatactcacattattcttctactttctctttctattgttttggtttttgtgccgctacctaaatttctttgtataatttggttgtccaata 39158251  T
Q  102 agttatcaacaaaaatggttgttcaaataacat 134  Q
    |||| |||  | |||||||||||||||||||||    
T  39158252 agttgtcacaataaatggttgttcaaataacat 39158284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 39440528 - 39440592
Alignment:
Q  1 attttctctctcatactcacattgtg-ttttaccttctctctctattgctttagtatttgtgtca 64  Q
    ||||||||| ||||||||||||| |  |||||| ||||||||||||||||||  | |||||||||    
T  39440528 attttctctttcatactcacattttcattttactttctctctctattgctttgatttttgtgtca 39440592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 51573656 - 51573608
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgcttt 51  Q
    ||||||| ||||||||||||| | |||||| || |||||||||||||||    
T  51573656 tttctctttcatactcacattattttttactttatctctctattgcttt 51573608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 130
Target Start/End: Original strand, 51577661 - 51577789
Alignment:
Q  3 tttctctctcatactcacattgtg-ttttaccttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtcccaaa 101  Q
    ||||||||||||||||| ||| |  |||||| ||||||||||||||||||  | |||||| || |||  | |||||||| |||  || |||||||| |||    
T  51577661 tttctctctcatactcatattatcattttactttctctctctattgctttgatttttgtgccactacctaaatttctttatataatttagttgtccaaaa 51577760  T
Q  102 agttatcaacaaaaatggttgttcaaata 130  Q
     ||| |||  | |||||||| ||||||||    
T  51577761 ggttgtcacaagaaatggttattcaaata 51577789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 87; Significance: 7e-42; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 38821411 - 38821542
Alignment:
Q  1 attttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtccca 99  Q
    ||||||| |||||||||||||||||||||| ||||||||  ||||||||||| ||||||||| |||||||||||||||||||||| |||| |||||||||    
T  38821411 attttctttctcatactcacattgtgtttttaccttctc--tctattgctttggtatttgtgccaatactcatatttctttgtatatttaggttgtccca 38821508  T
Q  100 aaagttatcaacaaaaatggttgttcaaataaca 133  Q
    |||||| ||||||||||| |||||||||||||||    
T  38821509 aaagttgtcaacaaaaattgttgttcaaataaca 38821542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 3 - 133
Target Start/End: Original strand, 2144766 - 2144898
Alignment:
Q  3 tttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtcccaaa 101  Q
    |||||||| |||||||||||| |||||| |  || ||||||||||||||| || |||||| |||||||||||||||||||||| ||||  |||| ||| |    
T  2144766 tttctctcccatactcacattttgtttttaatttatctctctattgctttggtttttgtgccaatactcatatttctttgtatatttagattgttccaca 2144865  T
Q  102 agttatcaacaaaaa-tggttgttcaaataaca 133  Q
    |||| |||||||||| | |||||||||||||||    
T  2144866 agttgtcaacaaaaattagttgttcaaataaca 2144898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 3 - 133
Target Start/End: Original strand, 40504271 - 40504404
Alignment:
Q  3 tttctctctcatactcacattgtgtttt-accttctctctct--attgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtccca 99  Q
    ||||||||| ||||||||||| |||||| ||||| | ||| |  ||||||||  | |||||||||||||| | |||||||| ||| |||  |||||||||    
T  40504271 tttctctcttatactcacattttgtttttaccttttttctttttattgctttgatttttgtgtcaatactaacatttctttatatattttggttgtccca 40504370  T
Q  100 aaagttatcaacaaaaatggttgttcaaataaca 133  Q
     |||||||||||||||||||||||||||||||||    
T  40504371 caagttatcaacaaaaatggttgttcaaataaca 40504404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 3 - 133
Target Start/End: Original strand, 40635761 - 40635894
Alignment:
Q  3 tttctctctcatactcacattgtgttt-taccttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtcccaaa 101  Q
    ||||||| ||||||||| ||| | ||| ||| |||| |||||||| ||||||| |||||||||||||||||| |||||||||| || ||||||||| ||     
T  40635761 tttctctttcatactcatattatatttctactttctttctctattactttagtttttgtgtcaatactcatacttctttgtatattaaagttgtcctaag 40635860  T
Q  102 agttatcaac--aaaaatggttgttcaaataaca 133  Q
     |||||||||  |||||||||| |||||||||||    
T  40635861 ggttatcaacaaaaaaatggtttttcaaataaca 40635894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 7 - 133
Target Start/End: Complemental strand, 4228959 - 4228829
Alignment:
Q  7 tctctcatactcacattgtgtttt-accttctctctcta---ttgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtcccaaaa 102  Q
    |||||| || |||||||||||||| |  |||||||||||   || ||||||| ||||||||||||||||||||||||||||| |||| ||| | ||| ||    
T  4228959 tctctcgtattcacattgtgtttttagtttctctctctactattactttagtttttgtgtcaatactcatatttctttgtatatttaggttattccagaa 4228860  T
Q  103 gttatcaacaaaaatggttgttcaaataaca 133  Q
    ||| ||||||||| || ||||||||||||||    
T  4228859 gttgtcaacaaaagtgattgttcaaataaca 4228829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 41 - 133
Target Start/End: Original strand, 40443135 - 40443227
Alignment:
Q  41 tctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtcccaaaagttatcaacaaaaatggttgttcaaataaca 133  Q
    ||||||||||| || |||||||| ||||| | |||||||| ||| |||  ||||||||| |||||||||||||||||||||||||||||||||    
T  40443135 tctattgctttggtttttgtgtcgatactaacatttctttatatattttggttgtcccacaagttatcaacaaaaatggttgttcaaataaca 40443227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 31548380 - 31548484
Alignment:
Q  27 ttttaccttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtcccaaaagttatcaacaaaaatggttgttca 126  Q
    |||||| |||||||||||||||||| |  ||||| ||||||||||||||||||||||| |||| ||||| ||  ||||| |||| |||  ||||||||||    
T  31548380 ttttactttctctctctattgctttggattttgtatcaatactcatatttctttgtatatttaggttgttccccaagttgtcaataaatgtggttgttca 31548479  T
Q  127 aataa 131  Q
    |||||    
T  31548480 aataa 31548484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 34 - 134
Target Start/End: Complemental strand, 6511549 - 6511449
Alignment:
Q  34 ttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtcccaaaagttatcaacaaaaatggttgttcaaataaca 133  Q
    |||||||||||||||||| || |||||||||| ||||| |||||||| ||| |||  ||||||||| ||||| ||    |||||||||||||||||||||    
T  6511549 ttctctctctattgctttggtttttgtgtcaagactcacatttctttctatattttggttgtcccacaagttgtcctacaaaatggttgttcaaataaca 6511450  T
Q  134 t 134  Q
    |    
T  6511449 t 6511449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 133
Target Start/End: Original strand, 28245775 - 28245904
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtcccaaaa 102  Q
    ||||||||||||||||||||| | |||||| || ||||||||||||||| || || |||  |||||  || ||||||||||  || | |||||  |||||    
T  28245775 tttctctctcatactcacattattttttactttatctctctattgctttggttttcgtgcaaatacctatttttctttgtaaattaaggttgtttcaaaa 28245874  T
Q  103 gttatcaacaaaaatggttgttcaaataaca 133  Q
    ||| |||||  ||||||||||||||||||||    
T  28245875 gttgtcaac-caaatggttgttcaaataaca 28245904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 34 - 133
Target Start/End: Original strand, 6646902 - 6647001
Alignment:
Q  34 ttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtcccaaaagttatcaacaaaaatggttgttcaaataaca 133  Q
    |||||||||||||||||| || |||||| ||| ||||| |||||||| ||| |||  ||||||||| ||||| ||    |||||||||||||||||||||    
T  6646902 ttctctctctattgctttggtttttgtgccaagactcacatttctttctatattttggttgtcccacaagttgtcctacaaaatggttgttcaaataaca 6647001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 134
Target Start/End: Complemental strand, 37316839 - 37316707
Alignment:
Q  3 tttctctctcatactcacattgtgttt-taccttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtcccaaa 101  Q
    |||||||||||||| ||||||||  || ||| ||||||||||||||||||  ||||||||||| |||  | ||||||||||||  |   ||||||| | |    
T  37316839 tttctctctcatacacacattgttcttctactttctctctctattgctttgatatttgtgtcactacctaaatttctttgtataatgtggttgtccaaca 37316740  T
Q  102 agttatcaacaaaaatggttgttcaaataacat 134  Q
    |||| |||   |||| |||||||||||||||||    
T  37316739 agttgtcatagaaaaaggttgttcaaataacat 37316707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 44977526 - 44977458
Alignment:
Q  1 attttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtcaatac 68  Q
    ||||||||||||||| | ||||| |||||| || |||||||||||||||||| || |||||||||||||    
T  44977526 attttctctctcatatttacattatgtttttactttctctctctattgctttggtttttgtgtcaatac 44977458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 41195628 - 41195695
Alignment:
Q  1 attttctctctcatactcacatt-gtgttttaccttctctctctattgctttagtatttgtgtcaata 67  Q
    |||||||||||||||||||||||    |||||| |||||||||||||||||| || ||||||||||||    
T  41195628 attttctctctcatactcacattacctttttactttctctctctattgctttggtttttgtgtcaata 41195695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 14255347 - 14255480
Alignment:
Q  1 attttctctctcatactcacattgtg-ttttaccttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaag-ttgtccc 98  Q
    |||||||||| |||||||||||  || |||||| ||||||||||||||| || || | ||||| |||||  |  ||||||||||  |||| | |||||||    
T  14255347 attttctctcacatactcacatcatggttttactttctctctctattgcattggtttatgtgttaatacctacttttctttgtaaatttatggttgtccc 14255446  T
Q  99 aaaagttatcaacaaaaatggttgttcaaataaca 133  Q
    ||||||| ||  || ||||||||||||||||||||    
T  14255447 aaaagttgtcg-cataaatggttgttcaaataaca 14255480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 35 - 133
Target Start/End: Complemental strand, 32972896 - 32972798
Alignment:
Q  35 tctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtcccaaaagttatcaacaaaaatggttgttcaaataaca 133  Q
    ||||||||||||||||| || |||||| ||| ||||| |||||||  ||| |||  ||||||||| ||||| ||    |||||||||||||||||||||    
T  32972896 tctctctctattgctttggtttttgtgccaagactcacatttcttactatattttggttgtcccacaagttgtcctacaaaatggttgttcaaataaca 32972798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 35705539 - 35705621
Alignment:
Q  1 attttctctctcatactcacattgtgttttaccttctctctctattgctttagtatttgtgtcaatactcatatttctttgta 83  Q
    ||||||||||||||||||||||| | |||||| || ||||| ||||||| | || || |||||||||||  | ||||||||||    
T  35705539 attttctctctcatactcacattatattttactttatctctttattgctatggttttcgtgtcaatactactttttctttgta 35705621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 27 - 105
Target Start/End: Complemental strand, 38911929 - 38911851
Alignment:
Q  27 ttttaccttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtcccaaaagtt 105  Q
    |||||| || ||||||||||| ||| || ||||||  ||||||||| ||||||| ||| ||||| ||||||||||||||    
T  38911929 ttttactttttctctctattgttttcgtttttgtgctaatactcatctttctttatatatttaaattgtcccaaaagtt 38911851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 34215309 - 34215378
Alignment:
Q  1 attttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtcaatact 69  Q
    ||||||||||||||| ||||||| |||||| || || ||| ||||||||| |||| ||||||||||||||    
T  34215309 attttctctctcatattcacattatgtttttactttttctttctattgctatagtttttgtgtcaatact 34215378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 134
Target Start/End: Complemental strand, 36587493 - 36587363
Alignment:
Q  3 tttctctctcatactcacattgtg-ttttaccttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtcccaaa 101  Q
    ||||||||||||||||||||| |  ||||||  |||||||||||||||||  | |||||| || ||   | ||||||||||||  || |||||||| |||    
T  36587493 tttctctctcatactcacattatcattttac--tctctctctattgctttgatttttgtgccactatctaaatttctttgtataatttagttgtccaaaa 36587396  T
Q  102 agttatcaacaaaaatggttgttcaaataacat 134  Q
     ||| |||  | |||||||||||||||||||||    
T  36587395 ggttgtcagaagaaatggttgttcaaataacat 36587363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 23690534 - 23690467
Alignment:
Q  3 tttctctctcatactcacat--tgtgttttaccttctctctctattgctttagtatttgtgtcaatac 68  Q
    ||||||||||||||||||||  ||| |||||| ||||| |||||||| ||| || |||||||||||||    
T  23690534 tttctctctcatactcacattatgttttttactttctcactctattgttttggtttttgtgtcaatac 23690467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 40937088 - 40937040
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgcttt 51  Q
    ||||||||||||||||||||| | |||||| || |||||||||||||||    
T  40937088 tttctctctcatactcacattattttttactttatctctctattgcttt 40937040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 42678796 - 42678844
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgcttt 51  Q
    ||||||||||||||||||||| | |||||| || |||||||||||||||    
T  42678796 tttctctctcatactcacattattttttactttatctctctattgcttt 42678844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 34 - 133
Target Start/End: Complemental strand, 2971807 - 2971708
Alignment:
Q  34 ttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtcccaaaagttatcaacaaaaatggttgttcaaataaca 133  Q
    |||||||||||||||||| || |||||  ||| ||||| |||| ||| ||| |||  ||||||||| ||||| ||    |||||||||||||||||||||    
T  2971807 ttctctctctattgctttggtttttgtaccaagactcacatttttttctatattttggttgtcccacaagttgtcttacaaaatggttgttcaaataaca 2971708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 9207636 - 9207695
Alignment:
Q  3 tttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtg 61  Q
    ||||||||||||||||||||| | |||| || |||||||||||||||||| || ||||||    
T  9207636 tttctctctcatactcacattatttttttactttctctctctattgctttggtttttgtg 9207695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 9647178 - 9647245
Alignment:
Q  3 tttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtcaatact 69  Q
    ||||||||||||||||| ||| | |||| || |||||||||||||||||| || ||||||||| ||||    
T  9647178 tttctctctcatactcatattatctttttactttctctctctattgctttggtttttgtgtcactact 9647245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 9760064 - 9760115
Alignment:
Q  3 tttctctctcatactcacattgtgtttt-accttctctctctattgctttag 53  Q
    ||||||||||||||||||||| | |||| || ||||||||||||||||||||    
T  9760064 tttctctctcatactcacattatctttttactttctctctctattgctttag 9760115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 10711769 - 10711836
Alignment:
Q  1 attttctctctcatactcacattgtgttttaccttctctctctattgctttagtatttgtgtcaatac 68  Q
    |||||||||||||||||||||||   |||||| || ||||||||||||||| || || |||| |||||    
T  10711769 attttctctctcatactcacattactttttactttatctctctattgctttggttttcgtgtaaatac 10711836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 18254234 - 18254175
Alignment:
Q  3 tttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtg 61  Q
    ||||||||||||||||||||| | |||| || |||||||||||||||||| || ||||||    
T  18254234 tttctctctcatactcacattatctttttactttctctctctattgctttggtttttgtg 18254175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 26277142 - 26277193
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgctttagt 54  Q
    ||||||||| ||||||||||| | |||||| || ||||||||||||||||||    
T  26277142 tttctctcttatactcacattattttttactttatctctctattgctttagt 26277193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 133
Target Start/End: Original strand, 44050063 - 44050192
Alignment:
Q  4 ttctctctcatactcacattgtg-ttttaccttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgttta-agttgtcccaaa 101  Q
    |||||||||||||||||||| || |||||| |||| ||| ||||||||| || |  ||||||||||  || ||||||||||  ||||  |||||| ||||    
T  44050063 ttctctctcatactcacattatgtttttactttctttctttattgctttggtttccgtgtcaatacatat-tttctttgtaaatttatggttgtctcaaa 44050161  T
Q  102 agttatcaacaaaaatggttgttcaaataaca 133  Q
    |||| ||  || ||||||||||||||||||||    
T  44050162 agttgtc-gcacaaatggttgttcaaataaca 44050192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 27 - 68
Target Start/End: Complemental strand, 7664066 - 7664025
Alignment:
Q  27 ttttaccttctctctctattgctttagtatttgtgtcaatac 68  Q
    |||||| |||||||||||||||||| || |||||||||||||    
T  7664066 ttttactttctctctctattgctttggtttttgtgtcaatac 7664025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 41042304 - 41042365
Alignment:
Q  7 tctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtcaata 67  Q
    ||||||||||||||||| | |||| || |||||||||||||||||| || ||| ||||||||    
T  41042304 tctctcatactcacattatctttttactttctctctctattgctttggtttttatgtcaata 41042365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 37 - 134
Target Start/End: Original strand, 44239118 - 44239215
Alignment:
Q  37 tctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtcccaaaagttatcaacaaaaatggttgttcaaataacat 134  Q
    |||||||||||||||  | ||||||||| | |  | ||||||||||||  || |||||||| |||| || |||  | |||||||||||||||||||||    
T  44239118 tctctctattgctttgatttttgtgtcactgcctaaatttctttgtataatttagttgtccaaaaaattgtcacaataaatggttgttcaaataacat 44239215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 2221040 - 2221088
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgcttt 51  Q
    ||||||||||||||||||||| | ||| || || |||||||||||||||    
T  2221040 tttctctctcatactcacattatttttcactttatctctctattgcttt 2221088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 5054659 - 5054703
Alignment:
Q  7 tctctcatactcacattgtgttttaccttctctctctattgcttt 51  Q
    ||||||||||||||||| ||| |||| || |||||||||||||||    
T  5054659 tctctcatactcacattatgtgttactttatctctctattgcttt 5054703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 6999092 - 6999044
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgcttt 51  Q
    |||||||||||||||||||||   |||||| || |||||||||||||||    
T  6999092 tttctctctcatactcacattactttttactttatctctctattgcttt 6999044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 12889856 - 12889808
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgcttt 51  Q
    ||||||||||||||||||||| | |||||  || |||||||||||||||    
T  12889856 tttctctctcatactcacattattttttaatttatctctctattgcttt 12889808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 13347839 - 13347791
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgcttt 51  Q
    |||||||||||||||||||||   |||||| || |||||||||||||||    
T  13347839 tttctctctcatactcacattactttttactttatctctctattgcttt 13347791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 18723641 - 18723689
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgcttt 51  Q
    ||||||||||||||||||||| | |||||| || ||||| |||||||||    
T  18723641 tttctctctcatactcacattattttttactttatctctttattgcttt 18723689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 25086372 - 25086416
Alignment:
Q  7 tctctcatactcacattgtgttttaccttctctctctattgcttt 51  Q
    ||||||||||||||||| |||||||| || ||||| |||||||||    
T  25086372 tctctcatactcacattatgttttactttatctctttattgcttt 25086416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 25881591 - 25881639
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgcttt 51  Q
    ||||||||||||||||||||| | |||||| || ||||||| |||||||    
T  25881591 tttctctctcatactcacattattttttactttatctctctgttgcttt 25881639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 130
Target Start/End: Original strand, 31578485 - 31578609
Alignment:
Q  7 tctctcatactcacattgtg-ttttaccttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtcccaaaagtt 105  Q
    ||||||||||||||||| |  |||||| || |||||||||||||||  | ||||||||| |||  | ||||||||||||   | |||||||| | |||||    
T  31578485 tctctcatactcacattattcttttactttatctctctattgctttgatttttgtgtcactacctaaatttctttgtataagttagttgtccaacaagtt 31578584  T
Q  106 atcaacaaaaatggttgttcaaata 130  Q
     |||  | ||||| |||||||||||    
T  31578585 gtcacaagaaatgattgttcaaata 31578609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 34119676 - 34119632
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattg 47  Q
    ||||||||||||||||||||| | |||||| || |||||||||||    
T  34119676 tttctctctcatactcacattattttttactttatctctctattg 34119632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 36802943 - 36802991
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgcttt 51  Q
    ||||||||||||||||||||| | |||||| || |||||||||| ||||    
T  36802943 tttctctctcatactcacattattttttactttatctctctattacttt 36802991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 37731226 - 37731142
Alignment:
Q  1 attttctctctcatactcacattg-tgttttaccttctctctctattgctttagtatttgtgtcaatactcatatttctttgtat 84  Q
    |||||||||||||||| ||||||| | || ||| ||| ||||||||||||||  |||||||| || |||  | ||||||||||||    
T  37731226 attttctctctcatacacacattgttcttctactttcgctctctattgctttgatatttgtgccactacctaaatttctttgtat 37731142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 42866801 - 42866845
Alignment:
Q  7 tctctcatactcacattgtgttttaccttctctctctattgcttt 51  Q
    ||||||||||||||||| | |||||| || |||||||||||||||    
T  42866801 tctctcatactcacattattttttactttatctctctattgcttt 42866845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 84; Significance: 4e-40; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 33605104 - 33604953
Alignment:
Q  1 attttctctctcatactcacattgtgttttaccttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtcccaa 100  Q
    ||||||||||||||||||||||||||||||  || |||||||||||||||| ||||||||||||||||||||  |||||||||| |||| ||||||||||    
T  33605104 attttctctctcatactcacattgtgtttttact-ctctctctattgctttggtatttgtgtcaatactcat--ttctttgtatatttaggttgtcccaa 33605008  T
Q  101 aagttatcaacaaaaatggttgttcaaataacatccttctttgccaaaataatgc 155  Q
    || || |||||||||||  ||||||||||||||  | |||||||||||| |||||    
T  33605007 aaattgtcaacaaaaataattgttcaaataacactcctctttgccaaaacaatgc 33604953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 3 - 133
Target Start/End: Complemental strand, 12284294 - 12284163
Alignment:
Q  3 tttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtcccaaa 101  Q
    ||||||||||||||||| ||| |||||| || |||||||| ||||| ||| || |||||| |||||||||||||||||||||| |||||| ||||||| |    
T  12284294 tttctctctcatactcatattttgtttttactttctctctttattgttttggtttttgtgacaatactcatatttctttgtatatttaagctgtcccaca 12284195  T
Q  102 agttatcaacaaaaatggttgttcaaataaca 133  Q
    |||| |||||||||||||||||||||||||||    
T  12284194 agttgtcaacaaaaatggttgttcaaataaca 12284163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 3 - 133
Target Start/End: Original strand, 39211088 - 39211219
Alignment:
Q  3 tttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtcccaaa 101  Q
    ||||||||||||||||||||| |||||| || || ||||||||||| ||| || ||||||||||||||||||||||||||||| ||||  ||||| || |    
T  39211088 tttctctctcatactcacattttgtttttactttttctctctattgttttggtttttgtgtcaatactcatatttctttgtatatttagattgtctcaca 39211187  T
Q  102 agttatcaacaaaaatggttgttcaaataaca 133  Q
    |||| |||||||||||| ||||||||||||||    
T  39211188 agttgtcaacaaaaatgattgttcaaataaca 39211219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 56 - 131
Target Start/End: Original strand, 4312649 - 4312724
Alignment:
Q  56 tttgtgtcaatactcatatttctttgtatgtttaagttgtcccaaaagttatcaacaaaaatggttgttcaaataa 131  Q
    ||||||||||||||||||||||||||| | |||| |||||||||  |||| |||||| || |||||||||||||||    
T  4312649 tttgtgtcaatactcatatttctttgtgtatttaggttgtcccaggagttgtcaacataattggttgttcaaataa 4312724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 34 - 133
Target Start/End: Original strand, 3946319 - 3946418
Alignment:
Q  34 ttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtcccaaaagttatcaacaaaaatggttgttcaaataaca 133  Q
    |||||||||||||||||| || |||||| ||| ||||| |||||||| ||| |||  ||||||||| ||||| ||    |||||||||||||||||||||    
T  3946319 ttctctctctattgctttggtttttgtgccaagactcacatttctttctatattttggttgtcccacaagttgtcctacaaaatggttgttcaaataaca 3946418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 3 - 133
Target Start/End: Complemental strand, 30439530 - 30439400
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgctttagtatttgtgtcaatactca-tatttctttgtatgtttaagttgtcccaaa 101  Q
    ||||||||||||||||||||| | |||||| || |||||||||||||||  | || |||  |||||||| | ||||||||||  ||   |||||| || |    
T  30439530 tttctctctcatactcacattattttttactttatctctctattgctttgattttcgtgcaaatactcattttttctttgtaaattatggttgtcacata 30439431  T
Q  102 agttatcaacaaaaatggttgttcaaataaca 133  Q
    ||||||||||  ||||||||||||||||||||    
T  30439430 agttatcaac-caaatggttgttcaaataaca 30439400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 33451587 - 33451539
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgcttt 51  Q
    ||||||||||||||||||||||| || ||| ||||||||||||||||||    
T  33451587 tttctctctcatactcacattgtcttctactttctctctctattgcttt 33451539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 133
Target Start/End: Complemental strand, 10839506 - 10839376
Alignment:
Q  4 ttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtcaatactcatatttctttgt-atgtttaagttgtcccaaa 101  Q
    |||||||||||||| ||||| |||||| || |||||| ||||||||||| || |||||| ||||| | |  ||||||||| |  ||| ||||||| ||||    
T  10839506 ttctctctcatacttacattatgtttttactttctctatctattgctttggtttttgtgccaatatttaattttctttgtaaaattttagttgtctcaaa 10839407  T
Q  102 agttatcaacaaaaatggttgttcaaataaca 133  Q
    | ||||| | |||||||| |||||||||||||    
T  10839406 aattatc-ataaaaatggatgttcaaataaca 10839376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 133
Target Start/End: Original strand, 32954919 - 32955018
Alignment:
Q  34 ttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtcccaaaagttatcaacaaaaatggttgttcaaataaca 133  Q
    |||||||||||||||||| || |||||||||| ||||| |||||||| ||| |||  ||||| | | ||||| ||    |||||||||||||||||||||    
T  32954919 ttctctctctattgctttggtttttgtgtcaagactcacatttctttctatattttggttgtactacaagttgtcctataaaatggttgttcaaataaca 32955018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 63 - 117
Target Start/End: Complemental strand, 5771858 - 5771804
Alignment:
Q  63 caatactcatatttctttgtatgtttaagttgtcccaaaagttatcaacaaaaat 117  Q
    ||||||| |||||||||||||| |||| ||||||||| ||||| |||||||||||    
T  5771858 caatacttatatttctttgtatatttaggttgtcccacaagttgtcaacaaaaat 5771804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 17775450 - 17775316
Alignment:
Q  1 attttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtccca 99  Q
    ||||||| ||| ||||||||||| |||| | |  ||||||||||| |||||| || |||||||||| |   |||||||||||||| ||| |||||||| |    
T  17775450 attttctttcttatactcacattatgttctcattttctctctctagtgctttggtttttgtgtcaagatctatatttctttgtatattttagttgtccta 17775351  T
Q  100 aaagttatcaacaaaaatggttgttcaaataacat 134  Q
     ||||| | |   ||||| ||||||||||||||||    
T  17775350 caagttgttacataaaatagttgttcaaataacat 17775316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 44090931 - 44091065
Alignment:
Q  1 attttctctctcatactcacattgtgttt-taccttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtccca 99  Q
    |||||||||||||||| ||||||||  || ||| ||||||||||||||||||  | ||||||||| |||  | ||||||||||||  |   ||||||| |    
T  44090931 attttctctctcatacacacattgttcttctactttctctctctattgctttgatttttgtgtcactacctaaatttctttgtataatgtggttgtccaa 44091030  T
Q  100 aaagttatcaacaaaaatggttgttcaaataacat 134  Q
    |||||| |||    ||| |||||||||||||||||    
T  44091031 aaagttgtcacatgaaaaggttgttcaaataacat 44091065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 68
Target Start/End: Original strand, 29025331 - 29025372
Alignment:
Q  27 ttttaccttctctctctattgctttagtatttgtgtcaatac 68  Q
    ||||||||||||||||||||||||| || |||||||||||||    
T  29025331 ttttaccttctctctctattgctttggtttttgtgtcaatac 29025372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 6991834 - 6991774
Alignment:
Q  1 attttctctctcatactcacattgtgttttaccttctctctctattgctttagtatttgtg 61  Q
    ||||||||||||||||||||||| | |||||| || ||||||| ||||||| || ||||||    
T  6991834 attttctctctcatactcacattattttttactttatctctcttttgctttggtttttgtg 6991774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 7473050 - 7472970
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgctttagtatttgtgtcaatactcatatttctttgta 83  Q
    |||||||||||||||||||||   |||||| || |||||||||||||||||| || |||  |||||  || ||||||||||    
T  7473050 tttctctctcatactcacattactttttactttatctctctattgctttagttttcgtgcaaatacctatttttctttgta 7472970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 7478829 - 7478873
Alignment:
Q  5 tctctctcatactcacattgtgttttaccttctctctctattgct 49  Q
    ||||||||||||||||||| | ||||||||| |||||||||||||    
T  7478829 tctctctcatactcacattattttttaccttatctctctattgct 7478873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 134
Target Start/End: Complemental strand, 25987807 - 25987679
Alignment:
Q  7 tctctcatactcacattgtgttt-taccttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtcccaaaagtt 105  Q
    ||||||||||||||||| |  || ||| || |||||||||||||||  | ||||||||| |||  | ||||||||||||  || |||||| | ||| |||    
T  25987807 tctctcatactcacattatcattctactttatctctctattgctttgatttttgtgtcactacctaaatttctttgtataatttagttgttcaaaaggtt 25987708  T
Q  106 atcaacaaaaatggttgttcaaataacat 134  Q
     |||  | |||||||||||||||||||||    
T  25987707 gtcacaagaaatggttgttcaaataacat 25987679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 34718162 - 34718210
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgcttt 51  Q
    ||||||||||||||||||||| | |||||| || |||||||||||||||    
T  34718162 tttctctctcatactcacattattttttactttatctctctattgcttt 34718210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 41159913 - 41159865
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgcttt 51  Q
    ||||||||||||||||||||| | |||||| || |||||||||||||||    
T  41159913 tttctctctcatactcacattattttttactttatctctctattgcttt 41159865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 9549225 - 9549178
Alignment:
Q  1 attttctctctcatactcacattgtgttttaccttctctctctattgc 48  Q
    ||||||||||||||||||||||| | |||||| || ||||||||||||    
T  9549225 attttctctctcatactcacattattttttactttatctctctattgc 9549178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 35067207 - 35067266
Alignment:
Q  3 tttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtg 61  Q
    ||||||||||||||||||||| | |||| || |||||||||||||||||| || ||||||    
T  35067207 tttctctctcatactcacattatatttttactttctctctctattgctttggtttttgtg 35067266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 36660475 - 36660408
Alignment:
Q  3 tttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtcaatact 69  Q
    ||||||||||||||| ||||| | |||| || |||||||||||||||||| ||  |||||||||||||    
T  36660475 tttctctctcatacttacattatctttttactttctctctctattgctttggttattgtgtcaatact 36660408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 1633914 - 1633868
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgct 49  Q
    ||||||||||||||||||||| | |||||| || |||||||||||||    
T  1633914 tttctctctcatactcacattattttttactttatctctctattgct 1633868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 5277520 - 5277462
Alignment:
Q  7 tctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtca 64  Q
    ||||||||||||||||| | |||| || ||||||||||||||||| ||| |||||||||    
T  5277520 tctctcatactcacattatctttttactttctctctctattgcttaagtttttgtgtca 5277462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 5277730 - 5277680
Alignment:
Q  1 attttctctctcatactcacattgtgttttaccttctctctctattgcttt 51  Q
    ||||||||||||||||||||||| | |||||  || |||||||||||||||    
T  5277730 attttctctctcatactcacattattttttattttatctctctattgcttt 5277680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 5740806 - 5740744
Alignment:
Q  7 tctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtcaatac 68  Q
    ||||||||||||||||| |||||| || |||||||||||||| ||| || |||||||| ||||    
T  5740806 tctctcatactcacattatgtttttactttctctctctattgttttggtttttgtgtcgatac 5740744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 10902751 - 10902817
Alignment:
Q  3 tttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtcaatac 68  Q
    ||||||||||| ||||||||| |||||| || ||||||||||||||||||  | |||||| ||||||    
T  10902751 tttctctctcacactcacattatgtttttactttctctctctattgctttgatttttgtgccaatac 10902817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 11253567 - 11253501
Alignment:
Q  3 tttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtcaatac 68  Q
    ||||||||||||||| ||||| | |||| |  |||||||||||||||||| || |||||||||||||    
T  11253567 tttctctctcatacttacattatctttttattttctctctctattgctttggtttttgtgtcaatac 11253501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 25830270 - 25830204
Alignment:
Q  3 tttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtcaatac 68  Q
    ||||||||||||||||||||| | |||| || ||||||||||||| ||||  |||||||| ||||||    
T  25830270 tttctctctcatactcacattatatttttactttctctctctattactttgatatttgtgccaatac 25830204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 45529270 - 45529224
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgct 49  Q
    ||||||||||||||||||||| | |||||| || |||||||||||||    
T  45529270 tttctctctcatactcacattattttttactttatctctctattgct 45529224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 22719484 - 22719545
Alignment:
Q  1 attttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtg 61  Q
    |||||||||||||| |||||||| | |||| || |||||||||||||||||| || ||||||    
T  22719484 attttctctctcatgctcacattatctttttactttctctctctattgctttggtttttgtg 22719545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 11017852 - 11017896
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattg 47  Q
    ||||||||||||||||||||| | |||||| || |||||||||||    
T  11017852 tttctctctcatactcacattattttttactttatctctctattg 11017896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 12735038 - 12734970
Alignment:
Q  1 attttctctctcatactcacattgtg-ttttaccttctctctctattgctttagtatttgtgtcaatac 68  Q
    ||||||||||||||||||| ||| || ||||||||| ||||| |||| ||||  | |||||||||||||    
T  12735038 attttctctctcatactcatattatgtttttaccttatctctatattactttgatttttgtgtcaatac 12734970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 16613685 - 16613729
Alignment:
Q  7 tctctcatactcacattgtgttttaccttctctctctattgcttt 51  Q
    ||||||||||||||||| | |||||| || |||||||||||||||    
T  16613685 tctctcatactcacattattttttactttatctctctattgcttt 16613729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 31249551 - 31249491
Alignment:
Q  1 attttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgt 60  Q
    ||||| ||||||||||||||||| | |||| || |||||||||||||||||| || |||||    
T  31249551 attttttctctcatactcacattatctttttactttctctctctattgctttggtttttgt 31249491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 32501223 - 32501159
Alignment:
Q  1 attttctctctcatactcacatt-gtgttttaccttctctctctattgctttagtatttgtgtca 64  Q
    |||||||||||||||||||||||  | |||||| ||||||||||||| ||||  | |||||||||    
T  32501223 attttctctctcatactcacattatttttttacgttctctctctattactttgatttttgtgtca 32501159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 34435763 - 34435679
Alignment:
Q  1 attttctctctcatactcacattg-tgttttaccttctctctctattgctttagtatttgtgtcaatactcatatttctttgtat 84  Q
    |||||||||||||||| ||||||| | || ||| ||| ||||||||||||||  |||||||| || |||  | ||||||||||||    
T  34435763 attttctctctcatacacacattgttcttctactttcgctctctattgctttgatatttgtgccactacctaaatttctttgtat 34435679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 36568009 - 36568053
Alignment:
Q  7 tctctcatactcacattgtgttttaccttctctctctattgcttt 51  Q
    ||||||||||||||||| | |||||| || |||||||||||||||    
T  36568009 tctctcatactcacattattttttactttatctctctattgcttt 36568053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 134
Target Start/End: Original strand, 44061764 - 44061896
Alignment:
Q  3 tttctctctcatactcacattgt-gttttaccttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtcccaaa 101  Q
    ||||||||||||||||||||| |  |||||| |||||| ||| |||||||  | ||||||||| ||   | ||||||||||||  ||  ||||||| | |    
T  44061764 tttctctctcatactcacattatcattttactttctctttctgttgctttgatttttgtgtcactatctaaatttctttgtataatttggttgtccaaca 44061863  T
Q  102 agttatcaacaaaaatggttgttcaaataacat 134  Q
    | ||||||  | |||| ||||||||||||||||    
T  44061864 aattatcacaagaaatagttgttcaaataacat 44061896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 2e-36; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 133
Target Start/End: Original strand, 29463044 - 29463173
Alignment:
Q  5 tctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtcccaaaag 103  Q
    ||||||||||||||||||| |||||| |  ||||||||||||||||||  | |||||| |||||||||||||||||||||| |||| ||||||||| |||    
T  29463044 tctctctcatactcacattttgtttttattttctctctctattgctttgatttttgtgccaatactcatatttctttgtatatttaggttgtcccacaag 29463143  T
Q  104 ttatcaacaaaaatggttgttcaaataaca 133  Q
    || |||||||||||||||||||||||||||    
T  29463144 ttgtcaacaaaaatggttgttcaaataaca 29463173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 3 - 133
Target Start/End: Original strand, 14532551 - 14532682
Alignment:
Q  3 tttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtcccaaa 101  Q
    ||||||||||||||||||||| |||||| || |||| ||||||||||||| ||  ||||||||||| |||||||||||||||| |||| ||| || || |    
T  14532551 tttctctctcatactcacattttgtttttactttctttctctattgctttggttcttgtgtcaatattcatatttctttgtatatttaggttatctcaca 14532650  T
Q  102 agttatcaacaaaaatggttgttcaaataaca 133  Q
    | || ||||| |||||||||||||||||||||    
T  14532651 aattgtcaacgaaaatggttgttcaaataaca 14532682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 3 - 133
Target Start/End: Complemental strand, 31683520 - 31683389
Alignment:
Q  3 tttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtcccaaa 101  Q
    ||||||||||||| ||| ||| |||||| || |||||| | ||||| ||| || ||||||||||||||||||||||||||||| |||||||| |   | |    
T  31683520 tttctctctcatattcatattatgtttttactttctctttttattgttttggtttttgtgtcaatactcatatttctttgtatatttaagttattgtaca 31683421  T
Q  102 agttatcaacaaaaatggttgttcaaataaca 133  Q
    |||| |||||||||||||||||||||||||||    
T  31683420 agttgtcaacaaaaatggttgttcaaataaca 31683389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 34 - 133
Target Start/End: Original strand, 8920157 - 8920256
Alignment:
Q  34 ttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtcccaaaagttatcaacaaaaatggttgttcaaataaca 133  Q
    |||||||||||||||||| || |||||| ||| ||||| |||||||| ||| |||  ||||||||| ||||| ||    |||||||||||||||||||||    
T  8920157 ttctctctctattgctttggtttttgtgccaagactcacatttctttctatattttggttgtcccacaagttgtcctacaaaatggttgttcaaataaca 8920256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 49 - 133
Target Start/End: Complemental strand, 15884728 - 15884644
Alignment:
Q  49 tttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtcccaaaagttatcaacaaaaatggttgttcaaataaca 133  Q
    |||||| |||||||||| ||||| |||||||| ||| |||  ||||||||| ||||||||    |||||||||||||||||||||    
T  15884728 tttagtttttgtgtcaagactcacatttctttctatattttggttgtcccacaagttatcttacaaaatggttgttcaaataaca 15884644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 36738994 - 36739056
Alignment:
Q  3 tttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtca 64  Q
    ||||||||||||||||||||| | |||| || |||||||||||||||||| || |||||||||    
T  36738994 tttctctctcatactcacattatctttttactttctctctctattgctttggtttttgtgtca 36739056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 37700507 - 37700553
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgct 49  Q
    ||||||||||||||||||||| | ||||||||| |||||||||||||    
T  37700507 tttctctctcatactcacattattttttaccttatctctctattgct 37700553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 39591724 - 39591790
Alignment:
Q  1 attttctctctcatactcacattgtgtt-ttaccttctctctctattgctttagtatttgtgtcaat 66  Q
    |||||||||| |||||||||||| |||| |||| |||||||||||||||||| || | |||||||||    
T  39591724 attttctctcacatactcacattatgttgttactttctctctctattgctttggtttgtgtgtcaat 39591790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 39592116 - 39592182
Alignment:
Q  1 attttctctctcatactcacattgtgtt-ttaccttctctctctattgctttagtatttgtgtcaat 66  Q
    |||||||||| |||||||||||| |||| |||| |||||||||||||||||| || | |||||||||    
T  39592116 attttctctcacatactcacattatgttgttactttctctctctattgctttggtttgtgtgtcaat 39592182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 8675459 - 8675327
Alignment:
Q  1 attttctctctcatactcacattgtgttttaccttctctctctattgctttagtatttgtgtcaatactca-tatttctttgtatgtttaagttgtccca 99  Q
    |||||||||||||||||||||||   |||||| || |||||||||||||||  | || |||  |||||  | | ||||||||||  ||   |||||||||    
T  8675459 attttctctctcatactcacattactttttactttatctctctattgctttgattttcgtgcaaataccaactttttctttgtaaattatggttgtccca 8675360  T
Q  100 aaagttatcaacaaaaatggttgttcaaataaca 133  Q
    |||||| |||||  ||||||||||||||||||||    
T  8675359 aaagttgtcaac-caaatggttgttcaaataaca 8675327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 18660803 - 18660872
Alignment:
Q  1 attttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtcaatact 69  Q
    |||||||||||||||||||| || | |||| || |||||||||||||||||| || |||||| |||||||    
T  18660803 attttctctctcatactcacgttatctttttactttctctctctattgctttggtttttgtgccaatact 18660872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 133
Target Start/End: Complemental strand, 19840010 - 19839880
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgctttagtatttgtgtcaatactca--tatttctttgtatgtttaagttgtcccaa 100  Q
    ||||||||||||||||||||| | |||||| || | ||||||||||||| || || |||  |||| |||  | ||||||||||  ||   ||||||||||    
T  19840010 tttctctctcatactcacattattttttactttatatctctattgctttggttttcgtgcaaata-tcaattttttctttgtaaattatggttgtcccaa 19839912  T
Q  101 aagttatcaacaaaaatggttgttcaaataaca 133  Q
    |||||||||||  |||| |||||||||||||||    
T  19839911 aagttatcaac-caaatagttgttcaaataaca 19839880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 20770178 - 20770243
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgctttagtatttgtgtcaatac 68  Q
    ||||||||||||||||||||| | |||||| || |||||||||||||||  | || ||||||||||    
T  20770178 tttctctctcatactcacattattttttactttatctctctattgctttgattttcgtgtcaatac 20770243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 35099029 - 35098964
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgctttagtatttgtgtcaatac 68  Q
    ||||||||||||||||||||| | |||||| || ||||||||||||| |||| |  ||||||||||    
T  35099029 tttctctctcatactcacattattttttactttatctctctattgctatagtttccgtgtcaatac 35098964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 22649688 - 22649624
Alignment:
Q  1 attttctctctcatactcacattgt-gttttaccttctctctctattgctttagtatttgtgtca 64  Q
    ||||||||||||||||||||||| |  |||||| |||||||  |||||||||||| |||||||||    
T  22649688 attttctctctcatactcacattatctttttactttctctccatattgctttagtttttgtgtca 22649624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 41175730 - 41175682
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgcttt 51  Q
    ||||||||||||||||||||| | |||||| || |||||||||||||||    
T  41175730 tttctctctcatactcacattattttttactttatctctctattgcttt 41175682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 131
Target Start/End: Original strand, 33599009 - 33599137
Alignment:
Q  3 tttctctctcatactcacattgtg-ttttaccttctctctctattgctttagtatttgtgtcaata-ctcatatttctttgtatgttta-agttgtccca 99  Q
    ||||| ||||||||||||||| || |||||| || |||||||||||||||| | |||||||||||| ||| | ||||||||||  |||| |||||||  |    
T  33599009 tttctttctcatactcacattatgtttttactttttctctctattgctttaat-tttgtgtcaatatctc-tttttctttgtaaatttatagttgtcata 33599106  T
Q  100 aaagttatcaacaaaaatggttgttcaaataa 131  Q
    ||| ||||| | | ||||||||||||||||||    
T  33599107 aaaattatc-atataaatggttgttcaaataa 33599137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 18842345 - 18842299
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgct 49  Q
    ||||||||||||||||||||| | |||||| || |||||||||||||    
T  18842345 tttctctctcatactcacattattttttactttatctctctattgct 18842299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 22098302 - 22098368
Alignment:
Q  3 tttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtcaatac 68  Q
    ||||||||||||||||||||| | |||| || ||||||||||||| ||||  |||||||| ||||||    
T  22098302 tttctctctcatactcacattatatttttactttctctctctattactttgatatttgtgccaatac 22098368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 35646429 - 35646491
Alignment:
Q  3 tttctctctcatactcacatt-gtgttttaccttctctctctattgctttagtatttgtgtca 64  Q
    |||||||||||||||||||||  | |||||| |||||||| ||||||||| || |||||||||    
T  35646429 tttctctctcatactcacattatttttttactttctctctatattgctttggtttttgtgtca 35646491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 41321301 - 41321367
Alignment:
Q  3 tttctctctcatactcacattgtgttt-taccttctctctctattgctttagtatttgtgtcaatac 68  Q
    ||||| ||||||||||||||| | ||| ||| ||||||||||||| |||| || |||||||||||||    
T  41321301 tttctttctcatactcacattatctttgtactttctctctctattactttggtttttgtgtcaatac 41321367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 56 - 133
Target Start/End: Original strand, 54801 - 54878
Alignment:
Q  56 tttgtgtcaatactcatatttctttgtatgtttaagttgtcccaaaagttatcaacaaaaatggttgttcaaataaca 133  Q
    ||||||||||||||| || |||||||||| |||  |||| | || |||||||||  |||||| |||||| ||||||||    
T  54801 tttgtgtcaatactcgtacttctttgtatattttggttgccgcacaagttatcataaaaaattgttgttaaaataaca 54878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 7076595 - 7076534
Alignment:
Q  1 attttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtg 61  Q
    ||||||||||||||||||| ||| | |||| || |||||||||||||||||| || ||||||    
T  7076595 attttctctctcatactcatattatttttttactttctctctctattgctttggtttttgtg 7076534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 33958276 - 33958219
Alignment:
Q  11 tcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtcaata 67  Q
    ||||||||||||| | |||| || |||||||||||||||||| || ||||||||||||    
T  33958276 tcatactcacattatatttttactttctctctctattgctttggtttttgtgtcaata 33958219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 7 - 67
Target Start/End: Complemental strand, 35650008 - 35649948
Alignment:
Q  7 tctctcatactcacattgtg-ttttaccttctctctctattgctttagtatttgtgtcaata 67  Q
    ||||||||||||||||| || |||||| ||||||||||||||| ||| | ||||||||||||    
T  35650008 tctctcatactcacattatgtttttactttctctctctattgcattaat-tttgtgtcaata 35649948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 42225790 - 42225745
Alignment:
Q  5 tctctctcatactcacattgtgtt-ttaccttctctctctattgct 49  Q
    |||||||||||||| ||||||||| |||| ||||||||||||||||    
T  42225790 tctctctcatactctcattgtgttcttactttctctctctattgct 42225745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 189727 - 189679
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgcttt 51  Q
    |||||||||||||||||||||   |||||| || |||||||||||||||    
T  189727 tttctctctcatactcacattactttttactttatctctctattgcttt 189679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 2972369 - 2972436
Alignment:
Q  3 tttctctctcatactcacattgtg--ttttaccttctctctctattgctttagtatttgtgtcaatac 68  Q
    ||||| ||||||||||||||| |   |||||| ||||||||||||||||||  | |||||||||||||    
T  2972369 tttctttctcatactcacattatcgtttttactttctctctctattgctttgatttttgtgtcaatac 2972436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 3640221 - 3640173
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgcttt 51  Q
    ||||||||||||||||||||| | |||||| || ||| |||||||||||    
T  3640221 tttctctctcatactcacattattttttactttatctttctattgcttt 3640173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 6517759 - 6517807
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgcttt 51  Q
    |||||||||||||||||||||   |||||| || |||||||||||||||    
T  6517759 tttctctctcatactcacattactttttactttatctctctattgcttt 6517807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 134
Target Start/End: Complemental strand, 13089806 - 13089674
Alignment:
Q  3 tttctctctcatactcacattgtgttt-taccttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtcccaaa 101  Q
    ||||||| ||||||||||||| |  || ||| || |||||||||||||||  | ||||||||| |||  | ||||||||||||  || | |||| | |||    
T  13089806 tttctctttcatactcacattatcattctactttatctctctattgctttgatttttgtgtcactacctaaatttctttgtataatttaattgttcaaaa 13089707  T
Q  102 agttatcaacaaaaatggttgttcaaataacat 134  Q
     ||| |||  | |||||||||||||||||||||    
T  13089706 ggttgtcataagaaatggttgttcaaataacat 13089674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 13461809 - 13461877
Alignment:
Q  1 attttctctctcatactcacattgtg-ttttaccttctctctctattgctttagtatttgtgtcaatac 68  Q
    ||||||||||||||| |||||||||| |||||  |||||||| | |||||||  |||||||| ||||||    
T  13461809 attttctctctcataatcacattgtgtttttattttctctctattttgctttgatatttgtgacaatac 13461877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 43196649 - 43196601
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgcttt 51  Q
    ||||| ||||||||||||||| | |||||| || |||||||||||||||    
T  43196649 tttctttctcatactcacattattttttactttatctctctattgcttt 43196601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 43441785 - 43441833
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgcttt 51  Q
    |||||||||||||||||||||   |||||| || |||||||||||||||    
T  43441785 tttctctctcatactcacattactttttactttatctctctattgcttt 43441833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 6e-30; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 7 - 133
Target Start/End: Original strand, 41650758 - 41650883
Alignment:
Q  7 tctctcatactcacattgtgttttaccttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtcccaaaagtta 106  Q
    ||||||||||||||||| ||||||  ||| ||||||||||| ||| || ||||||||||||||||| ||||||||||| |||| ||| ||||| |||||     
T  41650758 tctctcatactcacattttgtttttactt-tctctctattgttttggtttttgtgtcaatactcatgtttctttgtatatttatgttatcccacaagttg 41650856  T
Q  107 tcaacaaaaatggttgttcaaataaca 133  Q
    |||||||||||| ||||||||||||||    
T  41650857 tcaacaaaaatgattgttcaaataaca 41650883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 31675082 - 31674949
Alignment:
Q  1 attttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtccca 99  Q
    |||||| |||||||||||||||| |||||| || || ||||||||||| ||| || |||||| |||||||| |||||| |||||| |||| ||| |  ||    
T  31675082 attttcactctcatactcacattttgtttttactttttctctctattgatttggtttttgtgccaatactcgtatttcgttgtatatttaggttatttca 31674983  T
Q  100 aaagttatcaacaaaaatggttgttcaaataaca 133  Q
     ||||| |||||||||||| ||||||||||||||    
T  31674982 caagttgtcaacaaaaatgattgttcaaataaca 31674949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 24532969 - 24532880
Alignment:
Q  1 attttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgttta 89  Q
    ||||| ||||||||||||||||| |||||| || |||||||||||||||||| || ||||||||| ||||||||||||||| ||| ||||    
T  24532969 attttttctctcatactcacattatgtttttactttctctctctattgctttggtttttgtgtcattactcatatttctttatatattta 24532880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 41189568 - 41189502
Alignment:
Q  3 tttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtcaatac 68  Q
    ||||| ||||||||||||||| | |||| || ||||||||||||||||||||| |||||||||||||    
T  41189568 tttctttctcatactcacattatctttttactttctctctctattgctttagtttttgtgtcaatac 41189502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 84
Target Start/End: Original strand, 47448873 - 47448955
Alignment:
Q  3 tttctctctcatactcacattgtg-ttttaccttctctctctattgctttagtatttgtgtcaatactcatatttctttgtat 84  Q
    |||||||||||||||||||||||| |||||| |||| ||||||||||||| || |||||| || |||  | ||||||||||||    
T  47448873 tttctctctcatactcacattgtgtttttactttctttctctattgctttggtttttgtgccactacctaaatttctttgtat 47448955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 124
Target Start/End: Original strand, 2300139 - 2300252
Alignment:
Q  12 catactcacattgtgtttt-accttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtcccaaaagttatcaa 110  Q
    |||||||| |||||||||| |  |||||||||||||| |||    ||||||| |||||  |||||||||| ||| ||| |||||||||| || |||||||    
T  2300139 catactcatattgtgtttttattttctctctctattgttttgaattttgtgtgaatacctatatttctttctatattttagttgtcccacaaattatcaa 2300238  T
Q  111 caaaaatggttgtt 124  Q
    ||||| ||||||||    
T  2300239 caaaagtggttgtt 2300252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 130
Target Start/End: Original strand, 13152639 - 13152768
Alignment:
Q  3 tttctctctcatactcacattgtg-ttttaccttctctctctattgctttag-tatttgtgtcaatactcatatttctttgtatgtttaagttgtcccaa 100  Q
    ||||||||||||||||||||| |  |||||| |||||||||||||||||| | | |||||| || |||  | ||||||||||||  || |||||||| ||    
T  13152639 tttctctctcatactcacattatccttttactttctctctctattgcttttgatttttgtgccactacctaaatttctttgtataatttagttgtccaaa 13152738  T
Q  101 aagttatcaacaaaaatggttgttcaaata 130  Q
    | ||| |||  | |||||||||||||||||    
T  13152739 aggttgtcataagaaatggttgttcaaata 13152768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 134
Target Start/End: Complemental strand, 28249559 - 28249462
Alignment:
Q  37 tctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtcccaaaagttatcaacaaaaatggttgttcaaataacat 134  Q
    ||||||| |||||||  | ||||||||| |||| | ||||||||||||  || |||||||| ||||||| |||  | |||||||||||||||||||||    
T  28249559 tctctcttttgctttgatttttgtgtcactacttaaatttctttgtataatttagttgtccaaaaagttgtcacaagaaatggttgttcaaataacat 28249462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 131
Target Start/End: Complemental strand, 45420085 - 45419956
Alignment:
Q  3 tttctctctcatactcacattgtg-ttttaccttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtcccaaa 101  Q
    ||||||||||||| ||||||| |  |||||| |||||||||||||| |||  | |||||| || |||  | ||||||||||||  || |||||||| |||    
T  45420085 tttctctctcatattcacattatcattttactttctctctctattgttttgatttttgtgccactacctaaatttctttgtataatttagttgtccaaaa 45419986  T
Q  102 agttatcaacaaaaatggttgttcaaataa 131  Q
     ||| |||| | ||||||||||||||||||    
T  45419985 ggttgtcaaaagaaatggttgttcaaataa 45419956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 130
Target Start/End: Original strand, 34978343 - 34978471
Alignment:
Q  3 tttctctctcatactcacattgtg-ttttaccttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtcccaaa 101  Q
    ||||||||||||||||||||| |  |||||| ||||||||||||||||||  | |||||| || |||  | ||||||||||||  || |||||||| |||    
T  34978343 tttctctctcatactcacattatccttttactttctctctctattgctttgttttttgtgccactacctaaatttctttgtataatttagttgtccaaaa 34978442  T
Q  102 agttatcaacaaaaatggttgttcaaata 130  Q
     ||| |||  | ||||||||||| |||||    
T  34978443 ggttgtcacaagaaatggttgttaaaata 34978471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 102
Target Start/End: Complemental strand, 49129001 - 49128905
Alignment:
Q  7 tctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtcccaaaa 102  Q
    |||||||||||||||||||||||| || |||||||| || ||||||  | ||||||| ||| |  |||||||||||||| |||  ||||||||||||    
T  49129001 tctctcatactcacattgtgtttttactttctctctttactgctttgatttttgtgttaatgcctatatttctttgtatattttggttgtcccaaaa 49128905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 20454293 - 20454356
Alignment:
Q  4 ttctctctcatactcacattgtgttttaccttctctctctattgctttagtatttgtgtcaata 67  Q
    |||||||||||| |||| ||||||||||| || |||||||| ||||||||| || |||||||||    
T  20454293 ttctctctcatattcacgttgtgttttactttttctctctagtgctttagttttcgtgtcaata 20454356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 133
Target Start/End: Complemental strand, 31711929 - 31711830
Alignment:
Q  34 ttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtcccaaaagttatcaacaaaaatggttgttcaaataaca 133  Q
    |||||||||||||| ||| || |||||| ||| ||||| |||||||| ||| |||  ||||||||| || |||||    |||||||||||||||||||||    
T  31711929 ttctctctctattgttttggtttttgtgccaagactcacatttctttctatattttggttgtcccacaaattatcctacaaaatggttgttcaaataaca 31711830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 133
Target Start/End: Original strand, 33224902 - 33225001
Alignment:
Q  34 ttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtcccaaaagttatcaacaaaaatggttgttcaaataaca 133  Q
    ||||||||||||| |||| || |||||| ||| ||||| |||||||| ||| ||| | |||||||| ||||||||    |||||| ||||||||||||||    
T  33224902 ttctctctctattactttggtttttgtgccaagactcacatttctttctatattttaattgtcccacaagttatcctacaaaatgattgttcaaataaca 33225001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 133
Target Start/End: Original strand, 37899402 - 37899501
Alignment:
Q  34 ttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtcccaaaagttatcaacaaaaatggttgttcaaataaca 133  Q
    |||||||||||||||||| || |||||| ||| ||||| |||||||  ||| |||  ||||||||| ||||| ||    |||||||||||||||||||||    
T  37899402 ttctctctctattgctttggtttttgtgccaagactcacatttcttactatattttggttgtcccacaagttgtcctacaaaatggttgttcaaataaca 37899501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 84
Target Start/End: Complemental strand, 43081914 - 43081832
Alignment:
Q  3 tttctctctcatactcacattgtgttt-taccttctctctctattgctttagtatttgtgtcaatactcatatttctttgtat 84  Q
    ||||||||| |||| ||||||||  || ||| ||||||||||||||||||| ||||||||||| |||  | ||||||||||||    
T  43081914 tttctctcttatacacacattgttcttctactttctctctctattgctttaatatttgtgtcactacctaaatttctttgtat 43081832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 10055658 - 10055526
Alignment:
Q  1 attttctctctcatactcacattgtgttttaccttctctctctattgctttagtatttgtgtcaatactca-tatttctttgtatgtttaagttgtccca 99  Q
    ||||||| ||||||||||||||| | |||||| || ||||||||||||||| || |||||   |||||  | | ||||||||||  ||  ||||||||||    
T  10055658 attttctttctcatactcacattattttttactttatctctctattgctttggtttttgtacaaataccaactttttctttgtaaattatagttgtccca 10055559  T
Q  100 aaagttatcaacaaaaatggttgttcaaataaca 133  Q
     ||||| |||||  ||||||||||| ||||||||    
T  10055558 taagttgtcaac-caaatggttgtttaaataaca 10055526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 108
Target Start/End: Complemental strand, 31785496 - 31785388
Alignment:
Q  3 tttctctctcatactcacattgtg--ttttaccttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgt-ttaagttgtccca 99  Q
    ||||||||||||||||||||||||  |||||| |||||||||||||| ||| || ||  ||||||| || |  |||||| |||||| ||  |||||||||    
T  31785496 tttctctctcatactcacattgtgttttttactttctctctctattggtttggttttcatgtcaattcttacttttcttcgtatgtctttggttgtccca 31785397  T
Q  100 aaagttatc 108  Q
     ||||||||    
T  31785396 taagttatc 31785388  T

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Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 32952476 - 32952411
Alignment:
Q  2 ttttctctctcatactcacattgtgtttta-ccttctctctctattgctttagtatttgtgtcaat 66  Q
    |||| ||| ||||||||||||| ||||||| ||||||||||||||||||||  | |||||||||||    
T  32952476 ttttttctttcatactcacattttgttttaaccttctctctctattgctttgatttttgtgtcaat 32952411  T

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Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 4292475 - 4292523
Alignment:
Q  4 ttctctctcatactcacattgtg-ttttaccttctctctctattgcttt 51  Q
    |||||||||||||||||||| || |||||| ||||||||||||||||||    
T  4292475 ttctctctcatactcacattatgtttttactttctctctctattgcttt 4292523  T

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Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 11564940 - 11564988
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgcttt 51  Q
    ||||||||||||||||||||| | |||||| || |||||||||||||||    
T  11564940 tttctctctcatactcacattattttttactttatctctctattgcttt 11564988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 133
Target Start/End: Original strand, 28036791 - 28036921
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgctttagtatttgtgtcaatactca-tatttctttgtatgtttaagttgtcccaaa 101  Q
    ||||||||| ||||||||||| | |||||| || ||||||||||||||| || || |||  |||||  | | ||||||||||  ||   |||||||||||    
T  28036791 tttctctcttatactcacattattttttactttatctctctattgctttggttttcgtgcaaataccaactttttctttgtaaattatggttgtcccaaa 28036890  T
Q  102 agttatcaacaaaaatggttgttcaaataaca 133  Q
    |||| |||||  |||||||||||||| |||||    
T  28036891 agttgtcaac-caaatggttgttcaattaaca 28036921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 34 - 133
Target Start/End: Complemental strand, 37899205 - 37899106
Alignment:
Q  34 ttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtcccaaaagttatcaacaaaaatggttgttcaaataaca 133  Q
    |||||||||||||||||| || |||||| ||| | ||| |||||||  ||| |||  ||||||||| ||||| ||    |||||||||||||||||||||    
T  37899205 ttctctctctattgctttggtttttgtgccaagattcacatttcttactatattttggttgtcccacaagttgtcctacaaaatggttgttcaaataaca 37899106  T

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Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 40854681 - 40854630
Alignment:
Q  1 attttctctctcatactcacattgt-gttttaccttctctctctattgcttt 51  Q
    ||||||||||||||||||||||| |  |||||| ||||||||||||||||||    
T  40854681 attttctctctcatactcacattatatttttactttctctctctattgcttt 40854630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 134
Target Start/End: Complemental strand, 1504294 - 1504253
Alignment:
Q  92 ttgtcccaaaagttatcaacaaaaatggttgttcaaataacat 134  Q
    |||||||||||||||||| ||||| ||||||||||||||||||    
T  1504294 ttgtcccaaaagttatcaccaaaa-tggttgttcaaataacat 1504253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 33180736 - 33180690
Alignment:
Q  1 attttctctctcatactcacattgtgttttaccttctctctctattg 47  Q
    ||||||||||||||||||||||| | |||||| || |||||||||||    
T  33180736 attttctctctcatactcacattattttttactttatctctctattg 33180690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 36703898 - 36703844
Alignment:
Q  1 attttctctctcatactcacattgtgtttt-accttctctctctattgctttagt 54  Q
    ||||| ||||||||||||||||| | |||| || |||||||||||||||||||||    
T  36703898 attttatctctcatactcacattatttttttactttctctctctattgctttagt 36703844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 38344811 - 38344893
Alignment:
Q  7 tctctcatactcacattgtg-ttttaccttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgttt 88  Q
    ||||||||| |||||||||| |||||| || ||| |||||| ||||||| ||||||||| | |  | ||||||||||||||||    
T  38344811 tctctcatattcacattgtgtttttacgttttctttctattactttagtttttgtgtcactgcctaaatttctttgtatgttt 38344893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 39231752 - 39231706
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgct 49  Q
    ||||||||||||||||||||| | |||||| || |||||||||||||    
T  39231752 tttctctctcatactcacattattttttactttatctctctattgct 39231706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 43942683 - 43942741
Alignment:
Q  3 tttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgt 60  Q
    ||||||||||||||||||||| | |||| || |||||||||||||||||| || |||||    
T  43942683 tttctctctcatactcacattatctttttactttctctctctattgctttggtttttgt 43942741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 44189335 - 44189273
Alignment:
Q  3 tttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtca 64  Q
    ||||||||||||||||||||| | |||| || ||||||||||||| |||| || |||||||||    
T  44189335 tttctctctcatactcacattatctttttactttctctctctattactttggtttttgtgtca 44189273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 47078275 - 47078229
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgct 49  Q
    ||||||||||||||||||||| | |||||| || |||||||||||||    
T  47078275 tttctctctcatactcacattattttttactttatctctctattgct 47078229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 48062103 - 48062169
Alignment:
Q  3 tttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtcaatac 68  Q
    ||||||||| ||||||| ||| |||||| || |||||||||||||| ||| || |||||||||||||    
T  48062103 tttctctcttatactcatattatgtttttactttctctctctattgttttggtttttgtgtcaatac 48062169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 34108881 - 34108817
Alignment:
Q  1 attttctctctcatactcacattgtgttttaccttctctctctattgctttagtatttgtgtcaatac 68  Q
    ||||||||||||||||||||||| ||||||   | ||||||||| ||||||  | |||||||||||||    
T  34108881 attttctctctcatactcacattatgtttt---tactctctctactgctttgatttttgtgtcaatac 34108817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 131
Target Start/End: Complemental strand, 44184583 - 44184455
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgctttagtatttgtgtcaata-ctcatatttctttgtatgtttaagttgtcccaaa 101  Q
    |||||||||||||||||||||   |||||| || ||||||||||||||| || || |||  |||| ||  | ||||||||||  ||   ||||| |||||    
T  44184583 tttctctctcatactcacattactttttactttatctctctattgctttggttttcgtgcaaatacctattttttctttgtaaattatggttgttccaaa 44184484  T
Q  102 agttatcaacaaaaatggttgttcaaataa 131  Q
    |||| |||||  ||||||||||||||||||    
T  44184483 agttgtcaac-caaatggttgttcaaataa 44184455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 136
Target Start/End: Original strand, 1258534 - 1258634
Alignment:
Q  37 tctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtcccaaaagttatc-aacaaaaatggttgttcaaataacatc 135  Q
    ||||||||||| |||||| | ||||| |||||   ||||||||| ||| |||  |||||| || ||||| || || ||||||| ||||||||||||||||    
T  1258534 tctctctattggtttagtttctgtgttaatacctgtatttctttatatattttggttgtctcacaagttttctaaaaaaaatgattgttcaaataacatc 1258633  T
Q  136 c 136  Q
    |    
T  1258634 c 1258634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 7817684 - 7817731
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgcttt 51  Q
    ||||||||||||||||||||| | |||||| || |||||||||||||||    
T  7817684 tttctctctcatactcacattat-ttttactttatctctctattgcttt 7817731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 17002383 - 17002447
Alignment:
Q  3 tttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtcaat 66  Q
    ||||||| ||||||||||||| | |||| ||||||||| |||||| |||| || |||||||||||    
T  17002383 tttctctttcatactcacattatatttttaccttctctttctattactttggtttttgtgtcaat 17002447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 21559849 - 21559893
Alignment:
Q  7 tctctcatactcacattgtgttttaccttctctctctattgcttt 51  Q
    ||||||||||||||||| | |||||| || |||||||||||||||    
T  21559849 tctctcatactcacattattttttactttatctctctattgcttt 21559893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 27568070 - 27568130
Alignment:
Q  9 tctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtcaatac 68  Q
    ||||||||||| ||| |||||| || |||||||||||||| ||| || |||||||||||||    
T  27568070 tctcatactcatattatgtttttactttctctctctattgttttggtttttgtgtcaatac 27568130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 32815213 - 32815261
Alignment:
Q  1 attttctctctcatactcacattgtgttttaccttctctctctattgct 49  Q
    ||||| ||||||||||||||||| | |||||| || |||||||||||||    
T  32815213 attttttctctcatactcacattattttttactttatctctctattgct 32815261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 35452597 - 35452549
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgcttt 51  Q
    ||||||||||||||||||||  | |||||| || |||||||||||||||    
T  35452597 tttctctctcatactcacataattttttactttatctctctattgcttt 35452549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 3e-25; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 37 - 131
Target Start/End: Original strand, 19055518 - 19055612
Alignment:
Q  37 tctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtcccaaaagttatcaacaaaaatggttgttcaaataa 131  Q
    ||||||||||  |||||| ||||||| ||||||||||||||||||||| ||  ||| |||||| |||||||||||||||||||||||||||||||    
T  19055518 tctctctattattttagtttttgtgtaaatactcatatttctttgtatattatagtcgtcccacaagttatcaacaaaaatggttgttcaaataa 19055612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 27 - 134
Target Start/End: Complemental strand, 611635 - 611528
Alignment:
Q  27 ttttaccttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtcccaaaagttatcaacaaaaatggttgttca 126  Q
    |||||| || ||||| ||||| ||| || ||||||||||||||||||||||||||||| |||   |||||||| ||||| |||||||||||||||| |||    
T  611635 ttttactttatctctatattgttttggtttttgtgtcaatactcatatttctttgtatattttgattgtcccacaagttgtcaacaaaaatggttgctca 611536  T
Q  127 aataacat 134  Q
    ||||||||    
T  611535 aataacat 611528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 56 - 133
Target Start/End: Complemental strand, 47990300 - 47990222
Alignment:
Q  56 tttgtgtcaatactcatatttctttgtatgtttaagttgtcccaaaagttatc-aacaaaaatggttgttcaaataaca 133  Q
    ||||||||||||||||||||||||||||| |||  ||||||||| ||||| || ||||||||| |||||||||||||||    
T  47990300 tttgtgtcaatactcatatttctttgtatattttggttgtcccacaagttgtcaaacaaaaatagttgttcaaataaca 47990222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 3 - 134
Target Start/End: Complemental strand, 45008188 - 45008056
Alignment:
Q  3 tttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtcccaaa 101  Q
    ||||||||||||||||||||||| |||| ||| |||||||| |||| |||||| ||||| ||||| || | |||||||||||| |||   |||||| | |    
T  45008188 tttctctctcatactcacattgtatttttaccgtctctctccattgttttagtttttgtatcaatccttacatttctttgtatattttgattgtccaaca 45008089  T
Q  102 agttatcaacaaaaatggttgttcaaataacat 134  Q
    | |||||   |||||| ||||||||||||||||    
T  45008088 aattatcttaaaaaattgttgttcaaataacat 45008056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 9566985 - 9566919
Alignment:
Q  3 tttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtcaatac 68  Q
    ||||||||||||||||||||| |||||| || ||||| |||||||||||| || |||||||||||||    
T  9566985 tttctctctcatactcacattatgtttttactttctcactctattgctttggtttttgtgtcaatac 9566919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 14983819 - 14983884
Alignment:
Q  3 tttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtcaata 67  Q
    ||||||||||||| ||||||| |||||| || |||||||||||||| |||||| ||||||||||||    
T  14983819 tttctctctcatattcacattatgtttttactttctctctctattgttttagtttttgtgtcaata 14983884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 134
Target Start/End: Complemental strand, 47642631 - 47642499
Alignment:
Q  3 tttctctctcatactcacattgtgtt-ttaccttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtcccaaa 101  Q
    ||||||||||||||||||||| |  | |||| |||||| |||||||||||| | ||||||||| ||   | ||||||||||||  ||  ||||||| | |    
T  47642631 tttctctctcatactcacattatcatattactttctctttctattgctttaatttttgtgtcactatctaaatttctttgtataatttggttgtccaaca 47642532  T
Q  102 agttatcaacaaaaatggttgttcaaataacat 134  Q
    |||| ||   |||||||||||||||||||||||    
T  47642531 agttgtcccaaaaaatggttgttcaaataacat 47642499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 134
Target Start/End: Original strand, 48858870 - 48859002
Alignment:
Q  3 tttctctctcatactcacattgtg-ttttaccttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtcccaaa 101  Q
    ||||||||||||||||||||| |  |||||| | ||||||||||||||||  | ||||||||| ||   | ||||||||||||  || |||||||| |||    
T  48858870 tttctctctcatactcacattatcattttacttcctctctctattgctttgatttttgtgtcactatctaaatttctttgtataatttagttgtccaaaa 48858969  T
Q  102 agttatcaacaaaaatggttgttcaaataacat 134  Q
     ||| |||  | ||||||||||||| |||||||    
T  48858970 ggttgtcacaagaaatggttgttcatataacat 48859002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 50775181 - 50775118
Alignment:
Q  3 tttctctctcatactcacattgtg-ttttaccttctctctctattgctttagtatttgtgtcaa 65  Q
    ||||||||||||||||||||| || |||||| || ||||||||||||||| || ||||||||||    
T  50775181 tttctctctcatactcacattatgtttttactttatctctctattgctttggtttttgtgtcaa 50775118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 649815 - 649877
Alignment:
Q  3 tttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtca 64  Q
    ||||||||||||||||||||| | |||| || |||||||||||||||||| || |||||||||    
T  649815 tttctctctcatactcacattatctttttactttctctctctattgctttggtttttgtgtca 649877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 19442568 - 19442690
Alignment:
Q  13 atactcacattgtgtttt-accttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtcccaaaagttatcaac 111  Q
    ||||||||||| |||||| |  |||||||||||||||||| || |||||| ||| ||  |||| ||||||||| ||| |||||||| | ||||| | |      
T  19442568 atactcacattatgttttcattttctctctctattgctttggtttttgtgccaagacctatatatctttgtatattttagttgtccaataagttgttaca 19442667  T
Q  112 aaaaatggttgttcaaataacat 134  Q
     ||||| ||||||||||||||||    
T  19442668 taaaatagttgttcaaataacat 19442690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 44517988 - 44517855
Alignment:
Q  1 attttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgttta-agttgtccc 98  Q
    ||||||||||||||| ||||||| |||||| || || | ||| ||||  |||  | |||||||||||||  || ||||||||||  |||| |||| ||||    
T  44517988 attttctctctcatattcacattttgtttttactttttatctttattattttgatttttgtgtcaatacatatttttctttgtaaatttatagttatccc 44517889  T
Q  99 aaaagttatcaacaaaaatggttgttcaaataaca 133  Q
    ||||||||||| ||  |||||||||||||||||||    
T  44517888 aaaagttatca-cacgaatggttgttcaaataaca 44517855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 15083077 - 15083008
Alignment:
Q  1 attttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtcaatact 69  Q
    ||||||||||||||||| || || | |||| || |||||||||||||||||| || ||||||||||||||    
T  15083077 attttctctctcatacttactttatctttttactttctctctctattgctttggtttttgtgtcaatact 15083008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 8846018 - 8846086
Alignment:
Q  1 attttctctctcatactcacattgtg-ttttaccttctctctctattgctttagtatttgtgtcaatac 68  Q
    ||||||||||||||||||||||  || |||||| || ||| ||||||||||| || |||||||||||||    
T  8846018 attttctctctcatactcacatgatgtttttactttttctttctattgctttggtttttgtgtcaatac 8846086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 67
Target Start/End: Complemental strand, 49647170 - 49647110
Alignment:
Q  7 tctctcatactcacattgtgttttaccttctctctctattgctttagtatttgtgtcaata 67  Q
    ||||||||| ||||||| | |||||| |||||||||||||| ||| || ||||||||||||    
T  49647170 tctctcatattcacattatattttactttctctctctattgttttggtttttgtgtcaata 49647110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 52362529 - 52362577
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgcttt 51  Q
    ||||||||||||||||||||| | |||||| || |||||||||||||||    
T  52362529 tttctctctcatactcacattattttttactttatctctctattgcttt 52362577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 26837497 - 26837564
Alignment:
Q  1 attttctctctcatactcacattgtgttttaccttctctctctattgctttagtatttgtgtcaatac 68  Q
    |||||||||||||||||||| ||   |||||| || ||||||||||||| |||| | |||||||||||    
T  26837497 attttctctctcatactcacgttactttttactttatctctctattgctatagtttctgtgtcaatac 26837564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 34 - 133
Target Start/End: Complemental strand, 45065894 - 45065795
Alignment:
Q  34 ttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtcccaaaagttatcaacaaaaatggttgttcaaataaca 133  Q
    |||||||||||||||||| || |||||||||| | ||| |||||||| ||| |||   |||||||| ||||| ||    |||||| ||||||||||||||    
T  45065894 ttctctctctattgctttggtttttgtgtcaagattcacatttctttctatattttgattgtcccacaagttgtcttacaaaatgattgttcaaataaca 45065795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 46172433 - 46172366
Alignment:
Q  1 attttctctctcatactcacattgtgttttaccttctctctctattgctttagtatttgtgtcaatac 68  Q
    ||||||||||||||||||||||| | |||||  || ||||||||||||| |||| || ||| ||||||    
T  46172433 attttctctctcatactcacattattttttattttatctctctattgctatagttttcgtgccaatac 46172366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 49065381 - 49065322
Alignment:
Q  11 tcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtcaatact 69  Q
    ||||||||||||| |||||| || |||||||||||||||||| || |||||| |||||||    
T  49065381 tcatactcacattatgtttttactttctctctctattgctttggtttttgtgccaatact 49065322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 50824786 - 50824853
Alignment:
Q  1 attttctctctcatactcacattgtgttttaccttctctctctattgctttagtatttgtgtcaatac 68  Q
    ||||||||||||||||||| ||| | |||||| || ||||||||||||||| || ||  |||||||||    
T  50824786 attttctctctcatactcatattattttttactttatctctctattgctttggttttcatgtcaatac 50824853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 4213119 - 4213181
Alignment:
Q  3 tttctctctcatactcacattg-tgttttaccttctctctctattgctttagtatttgtgtca 64  Q
    |||||||||||||||||||||| | || ||||||||||||||||| ||||  | |||||||||    
T  4213119 tttctctctcatactcacattgttcttctaccttctctctctattactttgatttttgtgtca 4213181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 84
Target Start/End: Original strand, 4857957 - 4858039
Alignment:
Q  3 tttctctctcatactcacattgtgttt-taccttctctctctattgctttagtatttgtgtcaatactcatatttctttgtat 84  Q
    |||||||||||| | ||||||||  || ||| ||||||||||||||||||  |||||||| || |||| | ||||||||||||    
T  4857957 tttctctctcatgcacacattgttcttctactttctctctctattgctttgatatttgtgccactacttaaatttctttgtat 4858039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 133
Target Start/End: Original strand, 12128000 - 12128042
Alignment:
Q  91 gttgtcccaaaagttatcaacaaaaatggttgttcaaataaca 133  Q
    ||||||||| |||||||||| | ||||||||||||||||||||    
T  12128000 gttgtcccataagttatcaatacaaatggttgttcaaataaca 12128042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 21486341 - 21486295
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgct 49  Q
    ||||||||||||||||||||| | |||||| || |||||||||||||    
T  21486341 tttctctctcatactcacattattttttactttatctctctattgct 21486295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 29877344 - 29877410
Alignment:
Q  3 tttctctctcatactcacattgtgt-tttaccttctctctctattgctttagtatttgtgtcaatac 68  Q
    ||||||||||||||||| ||||| | ||||| |||||||||||||| ||| || || ||||||||||    
T  29877344 tttctctctcatactcatattgtatctttactttctctctctattgttttggttttcgtgtcaatac 29877410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 35369746 - 35369808
Alignment:
Q  3 tttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtca 64  Q
    ||||| ||||||||||||||||| |||| || ||||||||||||||||||  | |||||||||    
T  35369746 tttctatctcatactcacattgtctttttactttctctctctattgctttgatttttgtgtca 35369808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 37139949 - 37139821
Alignment:
Q  1 attttctctctcatactcacattgtgttttaccttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtcccaa 100  Q
    ||||||||||||||| ||||||||||||||   ||  |||||||||  ||| || ||| || ||||| ||||||||||||| || ||| |||   ||||     
T  37139949 attttctctctcatattcacattgtgtttttattta-ctctctattattttggtttttatgccaatattcatatttctttgcatattttagt---cccat 37139854  T
Q  101 aagttatcaacaaaaatggttgttcaaataaca 133  Q
    || || | |||||||||||||| ||||||||||    
T  37139853 aaattgttaacaaaaatggttgctcaaataaca 37139821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 40316970 - 40316920
Alignment:
Q  1 attttctctctcatactcacattgtgttttaccttctctctctattgcttt 51  Q
    |||||||||||||||||||||||   |||||| || |||||||||||||||    
T  40316970 attttctctctcatactcacattactttttactttatctctctattgcttt 40316920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 84
Target Start/End: Complemental strand, 40439864 - 40439782
Alignment:
Q  3 tttctctctcatactcacattgtgttt-taccttctctctctattgctttagtatttgtgtcaatactcatatttctttgtat 84  Q
    |||||||||||||| ||||||||  || ||| ||||||||||||||||||  |||||||| || |||  | ||||||||||||    
T  40439864 tttctctctcatacacacattgttcttctactttctctctctattgctttgatatttgtgacactacctaaatttctttgtat 40439782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 44632575 - 44632621
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgct 49  Q
    ||||||||||||||||||||| | |||||| || |||||||||||||    
T  44632575 tttctctctcatactcacattattttttactttatctctctattgct 44632621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 46543468 - 46543418
Alignment:
Q  1 attttctctctcatactcacattgtgttttaccttctctctctattgcttt 51  Q
    ||||||||||||||||||||| | | |||||| || |||||||||||||||    
T  46543468 attttctctctcatactcacactattttttactttatctctctattgcttt 46543418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 133
Target Start/End: Original strand, 47214255 - 47214384
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtcccaaaa 102  Q
    ||||||||||||||||||||| | |||||| || ||||||||||| | | || |  ||| |||||||  | ||||||||||  |||  ||||||  | ||    
T  47214255 tttctctctcatactcacattattttttactttatctctctattgttatggtttccgtgccaatactactttttctttgtaaattttggttgtcaaataa 47214354  T
Q  103 gttatcaacaaaaatggttgttcaaataaca 133  Q
    ||| || |||||| |||||||||||||||||    
T  47214355 gttgtc-acaaaattggttgttcaaataaca 47214384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 48261194 - 48261252
Alignment:
Q  11 tcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtcaatac 68  Q
    ||||||||||||| |||||| || |||||||||||||||||| || |||||| ||||||    
T  48261194 tcatactcacattatgtttttactttctctctctattgctttggtttttgtgccaatac 48261252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 133
Target Start/End: Complemental strand, 51286391 - 51286262
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtcccaaaa 102  Q
    ||||||||||||||||||||| | |||||  || ||||||||||||| | || |  ||| |||||||  | ||||||||||  |||  ||||||  | ||    
T  51286391 tttctctctcatactcacattattttttattttatctctctattgctatggtttccgtgccaatactactttttctttgtaaattttggttgtcaaataa 51286292  T
Q  103 gttatcaacaaaaatggttgttcaaataaca 133  Q
    ||| || |||||| |||||||||||||||||    
T  51286291 gttgtc-acaaaattggttgttcaaataaca 51286262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 3558893 - 3558949
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgctttagtatttgt 60  Q
    ||||||||||||||||||||| ||||||  ||| |||||||||| ||||||| |||||    
T  3558893 tttctctctcatactcacattatgtttttactt-tctctctattactttagtttttgt 3558949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 48
Target Start/End: Original strand, 9008272 - 9008317
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgc 48  Q
    ||||||||||||||||||||| | |||||| || ||||||||||||    
T  9008272 tttctctctcatactcacattattttttactttatctctctattgc 9008317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 12657268 - 12657329
Alignment:
Q  3 tttctctctcatactcacattgt-gttttaccttctctctctattgctttagtatttgtgtc 63  Q
    ||||||||||||||||||||| |  |||||| |||||| ||||||||||| || ||||||||    
T  12657268 tttctctctcatactcacattatctttttactttctctttctattgctttggtttttgtgtc 12657329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 12999847 - 12999766
Alignment:
Q  3 tttctctctcatactcacattgt-gttttaccttctctctctattgctttagtatttgtgtcaatactcatatttctttgta 83  Q
    ||||||||||||||||||||| |  |||||| |||||| |||||| ||||  |||||||| ||||||  || ||||||||||    
T  12999847 tttctctctcatactcacattatatttttactttctctttctattactttgatatttgtgccaatacatatttttctttgta 12999766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 29586038 - 29586083
Alignment:
Q  1 attttctctctcatactcacattgtgttttaccttctctctctatt 46  Q
    ||||||||||||||||||||||| | |||||| || ||||||||||    
T  29586038 attttctctctcatactcacattattttttactttatctctctatt 29586083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 36954704 - 36954768
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgctttagtatttgtgtcaatac 68  Q
    ||||| ||||||||||||||| ||||||  ||| ||||||| ||||||||||  ||||||||||||    
T  36954704 tttctttctcatactcacattatgtttttactt-tctctctcttgctttagttgttgtgtcaatac 36954768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 44257534 - 44257430
Alignment:
Q  27 ttttaccttctctctctattgctttagtatttgtgtcaatactcatattt-ctttgtatgtttaagttgtcccaaaagttatcaacaaaaatggttgttc 125  Q
    |||||| || ||||||| |||||||  | |||| ||||||||||| |||| |||||||| ||||  ||||| |  ||||| ||||||||| |||||||||    
T  44257534 ttttactttttctctctcttgctttgat-tttgggtcaatactcacattttctttgtatatttatattgtctcgtaagttgtcaacaaaagtggttgttc 44257436  T
Q  126 aaataa 131  Q
    ||||||    
T  44257435 aaataa 44257430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 3024776 - 3024728
Alignment:
Q  1 attttctctctcatactcacattgtgttttaccttctctctctattgct 49  Q
    ||||||||||||||||||| ||| | |||||| || |||||||||||||    
T  3024776 attttctctctcatactcatattattttttactttatctctctattgct 3024728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 8200122 - 8200170
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgcttt 51  Q
    ||||||||||||||||||||| | |||||| || || ||||||||||||    
T  8200122 tttctctctcatactcacattattttttactttatccctctattgcttt 8200170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 8411742 - 8411698
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattg 47  Q
    ||||||||||||||||||||| | |||||| || |||||||||||    
T  8411742 tttctctctcatactcacattattttttactttatctctctattg 8411698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 10890070 - 10890022
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgcttt 51  Q
    |||||||||||||||||||||   |||||| || |||||||||||||||    
T  10890070 tttctctctcatactcacattactttttactttatctctctattgcttt 10890022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 13489709 - 13489757
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgcttt 51  Q
    |||||||||||||||||||||   |||||| || |||||||||||||||    
T  13489709 tttctctctcatactcacattactttttactttatctctctattgcttt 13489757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 18336193 - 18336241
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgcttt 51  Q
    |||||||||||||||||||||   |||||| || |||||||||||||||    
T  18336193 tttctctctcatactcacattagtttttactttatctctctattgcttt 18336241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 19969586 - 19969538
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgcttt 51  Q
    |||||||||||||||||||||   |||||| || |||||||||||||||    
T  19969586 tttctctctcatactcacattactttttactttatctctctattgcttt 19969538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 33054112 - 33054064
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgcttt 51  Q
    ||||||||||||||||||||| | |||||| || ||||||||| |||||    
T  33054112 tttctctctcatactcacattattttttactttatctctctatggcttt 33054064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 34040524 - 34040476
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgcttt 51  Q
    ||||||||||||||||||||| | |||||| || |||||||||| ||||    
T  34040524 tttctctctcatactcacattattttttactttatctctctattacttt 34040476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 134
Target Start/End: Original strand, 41070873 - 41071001
Alignment:
Q  7 tctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtcccaaaagtt 105  Q
    |||||| || ||||| |||||||| || |||||| |||||||||||  | ||| |||||||||  | |||||||||||| ||| | || || || |||||    
T  41070873 tctctcttagtcacagtgtgtttttactttctctatctattgctttgatttttatgtcaatacctaaatttctttgtatatttcatttatcgcacaagtt 41070972  T
Q  106 atcaacaaaaatggttgttcaaataacat 134  Q
     ||   |||||| ||||||||||||||||    
T  41070973 ctcccaaaaaattgttgttcaaataacat 41071001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 48220168 - 48220120
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgcttt 51  Q
    ||||||||||||||||||||| | |||||| || |||||||||| ||||    
T  48220168 tttctctctcatactcacattattttttactttatctctctatttcttt 48220120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 48624923 - 48624971
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgcttt 51  Q
    ||||||||| ||||||||||| | |||||| || |||||||||||||||    
T  48624923 tttctctcttatactcacattattttttactttatctctctattgcttt 48624971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 50781594 - 50781546
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgcttt 51  Q
    |||||||||||||||||||||   |||||| || |||||||||||||||    
T  50781594 tttctctctcatactcacattactttttactttatctctctattgcttt 50781546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 46
Target Start/End: Complemental strand, 51718651 - 51718607
Alignment:
Q  3 tttctctctcatactcacattgt-gttttaccttctctctctatt 46  Q
    ||||||||||||||||||||| |  ||||||||||||||||||||    
T  51718651 tttctctctcatactcacattatctttttaccttctctctctatt 51718607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0343 (Bit Score: 52; Significance: 5e-21; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 3 - 133
Target Start/End: Original strand, 8887 - 9017
Alignment:
Q  3 tttctctctcatactcacattgtg-ttttaccttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtcccaaa 101  Q
    ||||||| ||||||| || ||||| |||||| |||||||||||||||| |  | ||||||||||||||||||||||||||||| |||  ||||||||  |    
T  8887 tttctctatcatacttac-ttgtgcttttactttctctctctattgctatgatttttgtgtcaatactcatatttctttgtatattttggttgtcccgca 8985  T
Q  102 agttatcaacaaaaatggttgttcaaataaca 133  Q
    |||| |||||||| ||  ||||||||||||||    
T  8986 agttgtcaacaaatatatttgttcaaataaca 9017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 26595393 - 26595461
Alignment:
Q  1 attttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtcaatac 68  Q
    ||||| ||||||||||||||||| |||||| || |||||||||||||||||| || |||||||||||||    
T  26595393 attttttctctcatactcacattatgtttttactttctctctctattgctttggtttttgtgtcaatac 26595461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 130
Target Start/End: Original strand, 8645355 - 8645483
Alignment:
Q  3 tttctctctcatactcacattgtg-ttttaccttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtcccaaa 101  Q
    ||||||||||||||||||||| |  |||||| ||||||||||||||||||  | | || |||| |||  | ||||||||||||  || |||||||| |||    
T  8645355 tttctctctcatactcacattatccttttactttctctctctattgctttgatttatgcgtcactacctaaatttctttgtataatttagttgtccaaaa 8645454  T
Q  102 agttatcaacaaaaatggttgttcaaata 130  Q
     ||| |||  | |||||||||||||||||    
T  8645455 ggttgtcacaagaaatggttgttcaaata 8645483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 5080592 - 5080530
Alignment:
Q  3 tttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtca 64  Q
    ||||||| ||||||||||||| | |||| || ||||||||||||||||||||| |||||||||    
T  5080592 tttctctttcatactcacattatttttttactttctctctctattgctttagtttttgtgtca 5080530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 133
Target Start/End: Complemental strand, 20822892 - 20822763
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtcccaaaa 102  Q
    |||||||||||||||||||||   |||||| || ||||||||||||||| || || |||  |||||  |||||| ||| ||  ||   ||||||| ||||    
T  20822892 tttctctctcatactcacattactttttactttatctctctattgctttggttttcgtgcaaataccaatatttttttataaattatggttgtcctaaaa 20822793  T
Q  103 gttatcaacaaaaatggttgttcaaataaca 133  Q
    ||| |||||  ||||||||||||||||||||    
T  20822792 gttgtcaac-caaatggttgttcaaataaca 20822763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 22079588 - 22079522
Alignment:
Q  3 tttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtcaatac 68  Q
    ||||||||||| ||||||||| |||||| || ||||||||||||||||||  | |||||||||||||    
T  22079588 tttctctctcacactcacattatgtttttactttctctctctattgctttgatttttgtgtcaatac 22079522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 73 - 134
Target Start/End: Complemental strand, 10053112 - 10053051
Alignment:
Q  73 atttctttgtatgtttaagttgtcccaaaagttatcaacaaaaatggttgttcaaataacat 134  Q
    |||||||||||| ||| |||||||||| |||||||| |  ||||| ||||||||||||||||    
T  10053112 atttctttgtatattttagttgtcccacaagttatccaataaaatagttgttcaaataacat 10053051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 13423015 - 13423096
Alignment:
Q  3 tttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtcaatactcatatttctttgta 83  Q
    ||||||||||||||||||||| | |||| || |||||||||||||  |||||| |||||| ||||||  || ||||||||||    
T  13423015 tttctctctcatactcacattatatttttactttctctctctattattttagtttttgtgccaatacatatttttctttgta 13423096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 21968916 - 21968851
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgctttagtatttgtgtcaatac 68  Q
    ||||||| | ||||||||||| ||||||||||| |||| |||||| |||||| |||||| ||||||    
T  21968916 tttctcttttatactcacattatgttttaccttttctcactattgttttagtttttgtgccaatac 21968851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 133
Target Start/End: Original strand, 34850737 - 34850814
Alignment:
Q  56 tttgtgtcaatactcatatttctttgtatgtttaagttgtcccaaaagttatcaacaaaaatggttgttcaaataaca 133  Q
    ||||||||||||||||||||||||||||| ||| | |||||  | || ||||  ||||||||| |||||||| |||||    
T  34850737 tttgtgtcaatactcatatttctttgtatattttacttgtcttacaacttattgacaaaaatgattgttcaagtaaca 34850814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 11547555 - 11547507
Alignment:
Q  1 attttctctctcatactcacattgtgttttaccttctctctctattgct 49  Q
    ||||||||||||||||||||||| | |||||| || |||||||||||||    
T  11547555 attttctctctcatactcacattattttttactttatctctctattgct 11547507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 17551403 - 17551339
Alignment:
Q  3 tttctctctcatactcacattgtg-ttttaccttctctctctattgctttagtatttgtgtcaat 66  Q
    ||||||||||||||||||||| || |||||| || ||||||||||| ||| || |||||||||||    
T  17551403 tttctctctcatactcacattatgtttttactttatctctctattgttttggtttttgtgtcaat 17551339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 133
Target Start/End: Complemental strand, 13143406 - 13143276
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgctttagtatttgtgtcaatactca-tatttctttgtatgtttaagttgtcccaaa 101  Q
    |||||||||||||||||||||   |||||| || |||||||||||||||  | || |||  |||||  | | ||||||||||  ||   |||||||||||    
T  13143406 tttctctctcatactcacattactttttactttatctctctattgctttgattttcgtgcaaatacaaactttttctttgtaaattatggttgtcccaaa 13143307  T
Q  102 agttatcaacaaaaatggttgttcaaataaca 133  Q
    |||| |||||  ||||||||||||||||||||    
T  13143306 agttgtcaac-caaatggttgttcaaataaca 13143276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 25811863 - 25811804
Alignment:
Q  3 tttctctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtg 61  Q
    ||||||||||||||||||||| | |||| || |||||||||||||||||| || ||||||    
T  25811863 tttctctctcatactcacattatctttttactttctctctctattgctttggtttttgtg 25811804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 133
Target Start/End: Complemental strand, 35213585 - 35213455
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgctttagtatttgtgtcaatactca-tatttctttgtatgtttaagttgtcccaaa 101  Q
    |||||||||||||||||||||   |||||| || ||||||||||||||| || || |||  |||||  | | ||||||||||  ||    ||||||||||    
T  35213585 tttctctctcatactcacattactttttactttatctctctattgctttggttttcgtgcaaataccaactttttctttgtaaattatgattgtcccaaa 35213486  T
Q  102 agttatcaacaaaaatggttgttcaaataaca 133  Q
    |||| |||||  ||||||||||||||||||||    
T  35213485 agttgtcaac-caaatggttgttcaaataaca 35213455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 3853332 - 3853251
Alignment:
Q  3 tttctctctcatactcacattgtgttttacctt-ctctctctattgctttagtatttgtgtcaata-ctcatatttctttgta 83  Q
    ||||||||||||| |||| || ||||||| ||| ||||||||||||||||  | |||||||||||| ||||| ||||||||||    
T  3853332 tttctctctcataatcaccttatgttttaactttctctctctattgctttgatttttgtgtcaatatctcat-tttctttgta 3853251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 8098618 - 8098560
Alignment:
Q  7 tctctcatactcacattgtgtttt-accttctctctctattgctttagtatttgtgtca 64  Q
    ||||||||||||||||| | |||| || |||||||||||||||||| || |||||||||    
T  8098618 tctctcatactcacattttctttttactttctctctctattgctttggtttttgtgtca 8098560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 34047433 - 34047498
Alignment:
Q  3 tttctctctcatactcacattgt-gttttaccttctctctctattgctttagtatttgtgtcaata 67  Q
    ||||||||||||||||||||| |  ||||| ||| ||||||||||||||| || |||||| |||||    
T  34047433 tttctctctcatactcacattatctttttatcttatctctctattgctttggtttttgtgccaata 34047498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 2075475 - 2075431
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattg 47  Q
    ||||||||||||||||||||| | |||||| || |||||||||||    
T  2075475 tttctctctcatactcacattattttttactttatctctctattg 2075431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 4820298 - 4820342
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattg 47  Q
    ||||||||||||||||||||| | |||||| || |||||||||||    
T  4820298 tttctctctcatactcacattattttttactttatctctctattg 4820342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 18141325 - 18141277
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattgcttt 51  Q
    |||||||||||||||||||||   |||||| || |||||||||||||||    
T  18141325 tttctctctcatactcacattactttttactttatctctctattgcttt 18141277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 134
Target Start/End: Complemental strand, 20661988 - 20661889
Alignment:
Q  37 tctctctattgctttagtatttgtgtcaatactcata--tttctttgtatgtttaagttgtcccaaaagttatcaacaaaaatggttgttcaaataacat 134  Q
    |||||||||||||||| ||||| ||| ||||||  ||  ||| ||||||| ||| | |||||  | || |||||||  ||||||||||||||||||||||    
T  20661988 tctctctattgctttaatatttatgttaatacttctacatttttttgtatattttaattgtcttacaaattatcaagtaaaatggttgttcaaataacat 20661889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 28041834 - 28041790
Alignment:
Q  7 tctctcatactcacattgtgttttaccttctctctctattgcttt 51  Q
    ||||||||||||||||||| ||| || || |||||||||||||||    
T  28041834 tctctcatactcacattgtttttaactttatctctctattgcttt 28041790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 34442089 - 34442029
Alignment:
Q  1 attttctctctcatactcacattgtgttttaccttctctctctattgctttagtatttgtg 61  Q
    ||||||||||||||||||||||||| || ||| || | |||| |||||||| || ||||||    
T  34442089 attttctctctcatactcacattgtattatactttatatctccattgctttggtttttgtg 34442029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 8979 - 8845
Alignment:
Q  1 attttctctctcatactcacattgtgttt-taccttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtccca 99  Q
    |||||||||||||||| ||||||||  || ||| ||||||||||||||||||  | ||||||||| |||  | ||||||||||||  |   ||||||| |    
T  8979 attttctctctcatacacacattgttcttctactttctctctctattgctttgatttttgtgtcactacctaaatttctttgtataatgtggttgtccaa 8880  T
Q  100 aaagttatcaacaaaaatggttgttcaaataacat 134  Q
    |||||| |||    ||| |||||||||||||||||    
T  8879 aaagttgtcacatgaaaaggttgttcaaataacat 8845  T

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Target: scaffold0034 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 132
Target Start/End: Original strand, 22657 - 22755
Alignment:
Q  34 ttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtcccaaaagttatcaacaaaaatggttgttcaaataac 132  Q
    ||||||||| ||||||||  | |||||| | | ||||| |||||||||||| |||  ||||||||| ||||| ||    ||||||||||||||||||||    
T  22657 ttctctctccattgctttgatttttgtgcctagactcacatttctttgtatattttggttgtcccacaagttgtcccataaaatggttgttcaaataac 22755  T

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Target: scaffold0128 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 134
Target Start/End: Original strand, 10983 - 11113
Alignment:
Q  3 tttctctctcatactcacattgtg-ttttaccttctctctctattgctttagtatttgtgtcaatactcatatttctttgtatgtttaagttgtcccaaa 101  Q
    ||||||||||||||||||||| |  ||||||  |||||||||||||||||  | |||||| || ||   | ||||||||||||  || |||||||  |||    
T  10983 tttctctctcatactcacattatcattttac--tctctctctattgctttgatttttgtgccactaactaaatttctttgtataatttagttgtcgaaaa 11080  T
Q  102 agttatcaacaaaaatggttgttcaaataacat 134  Q
     ||| |||| | ||| |||||||||||||||||    
T  11081 ggttttcaaaagaaagggttgttcaaataacat 11113  T

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Target: scaffold0532 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0532
Description:

Target: scaffold0532; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 11011 - 11055
Alignment:
Q  3 tttctctctcatactcacattgtgttttaccttctctctctattg 47  Q
    ||||||||||||||||||||| | |||||| || |||||||||||    
T  11011 tttctctctcatactcacattattttttactttatctctctattg 11055  T

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Target: scaffold0519 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 11827 - 11894
Alignment:
Q  3 tttctctctcatactcacattgtg--ttttaccttctctctctattgctttagtatttgtgtcaatac 68  Q
    ||||||||||||||| ||||| |   |||||  |||||||||||||||||| || |||||||||||||    
T  11827 tttctctctcatacttacattattctttttattttctctctctattgctttggtttttgtgtcaatac 11894  T

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