View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15446_low_2 (Length: 499)
Name: NF15446_low_2
Description: NF15446
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15446_low_2 |
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Alignment Details
Target: chr7 (Bit Score: 469; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 469; E-Value: 0
Query Start/End: Original strand, 14 - 482
Target Start/End: Original strand, 40511158 - 40511626
Alignment:
| Q |
14 |
aaaggaattaagctgagttcattcacgagaacaatgaagtgaagcattttcattttggatccttctctctctttcattctaactaactaaaactcgcttt |
113 |
Q |
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| T |
40511158 |
aaaggaattaagctgagttcattcacgagaacaatgaagtgaagcattttcattttggatccttctctctctttcattctaactaactaaaactcgcttt |
40511257 |
T |
|
| Q |
114 |
atatatatttttccctccaaatcttcataactgaatcgtaacaaactcaaacctcacaatgttggatctcaatctcaacgctgattcctctcttccactc |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40511258 |
atatatatttttccctccaaatcttcataactgaatcgtaacaaactcaaacctcacaatgttggatctcaatctcaacgctgattcctctcttccactc |
40511357 |
T |
|
| Q |
214 |
tcctccgtcgttcagatggaagattcatccggtagctttgattcctccgtcgtcaacgctgccgacactgaagattcatgctcttacggcgatgcatacg |
313 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40511358 |
tcctccgtcgttcagatggaagattcatccggtagctttgattcctccgtcgtcaacgctgccgacactgaagattcatgctcttacggcgatgcatacg |
40511457 |
T |
|
| Q |
314 |
gttacaacttcgccatactcaacaacaacgcttccgtcgacaacagtactatctccggtgaacttcaacattccggcgccggagaagcaggtgtacggac |
413 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40511458 |
gttacaacttcgccatactcaacaacaacgcttccgtcgacaacagtactatctccggtgaacttcaacattccggcgccggagaagcaggtgtacggac |
40511557 |
T |
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| Q |
414 |
aattcagctttttcctgctaacgaatcgggaatgatctcgccatctgagagtagtggatggatgaattt |
482 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40511558 |
aattcagctttttcctgctaacgaatcgggaatgatctcgccatctgagagtagtggatggatgaattt |
40511626 |
T |
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