View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15447_high_7 (Length: 307)
Name: NF15447_high_7
Description: NF15447
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15447_high_7 |
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Alignment Details
Target: chr3 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 19 - 295
Target Start/End: Original strand, 52583997 - 52584273
Alignment:
| Q |
19 |
ctagcacctgttctactcccatgaaacaacttctcagcatatttttcattcattctatcaatcacatttccaccaacatcaacaagatcttcaagaagtg |
118 |
Q |
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| T |
52583997 |
ctagcacctgttctactcccatgaaacaacttctcagcatatttttcattcattctatcaatcacatttccaccaacatcaacaagatcttcaagaagtg |
52584096 |
T |
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| Q |
119 |
actgtactggtttaaggtatctagagttcccaataacggaaccaaaactctcacttccataagaagtagaagtagaacggttcaataataatgagttatt |
218 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
52584097 |
actgtactggtttaaggtatctagagttcccaataacagaaccaaaactctcacttccataagaagtagaagtagaacggttcaataataatgagttatt |
52584196 |
T |
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| Q |
219 |
attattagaacctgaagcaaaagttccacttccaccactgaaaaaataatcacttgttagattctccaccacaggtt |
295 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
52584197 |
attattagaacctgaagcaaaagttccacttccaccactgaaaaaataatcactagttagattctccaccacaggtt |
52584273 |
T |
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