View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15447_low_3 (Length: 382)
Name: NF15447_low_3
Description: NF15447
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15447_low_3 |
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Alignment Details
Target: chr8 (Bit Score: 349; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 349; E-Value: 0
Query Start/End: Original strand, 16 - 368
Target Start/End: Original strand, 12394276 - 12394628
Alignment:
| Q |
16 |
cagagaaagttcttcacagagtgctcataatgtatactcatatcattaagcttaaccatattttgttacttctatttctttatcctttctaaagtttttt |
115 |
Q |
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| T |
12394276 |
cagagaaagttcttcacagagtgctcataatgtatactcatatcattaagcttaaccatattttgttacttctatttctttatcctttctaaagtttttt |
12394375 |
T |
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| Q |
116 |
cctccaatatattatttcagcattcatattatgatgtgccttcacaaagtcattttgaacgagaagatgatgatttggctcatgtcatttcactgtcttt |
215 |
Q |
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| T |
12394376 |
cctccaatatattatttcagcattcatattatgatgtgccttcacaaagtcattttgaacgagaagatgatgatttggctcatgtcatttcactgtcttt |
12394475 |
T |
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| Q |
216 |
acaggttttgaaaattccttttaattcctatatgactcaatttgtaccttcccaatgtatctgattcttagttccaattgcattcaatttagaccgcaga |
315 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12394476 |
acaggttttgaaaattccttttaattcctatatgactcaatttgtaccttcccaatgtatctgattcttagttccaattgcattcaatttagaccgcaga |
12394575 |
T |
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| Q |
316 |
gaaagaggaagcaatacgtgagcttcaagtgaaagaggaaagtgaagtacttg |
368 |
Q |
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|||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
12394576 |
gaaagaggaagcaatacgtgagcttcgagtgaaagaggaaagtgaagtacttg |
12394628 |
T |
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