View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15448_low_21 (Length: 249)
Name: NF15448_low_21
Description: NF15448
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15448_low_21 |
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Alignment Details
Target: chr2 (Bit Score: 180; Significance: 3e-97; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 422949 - 422716
Alignment:
| Q |
1 |
taaggtacatacaagtgtgtcttctataacttttgaagtctaaagtttgatttagaatgctctgtatctctttctctccaagtgtgtagattgttaatag |
100 |
Q |
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| T |
422949 |
taaggtacatacaagtgtgtcttctataacttttgaagtctaaagttttatttagaatgctttgtatctctttctctccaagtgtgtagattgttaatag |
422850 |
T |
|
| Q |
101 |
gatgcatatatttgcaatacatttgtctttttagacggtatatagattttgagagcatttgttggtgtcaagnnnnnnnnnnggtcgctaagaggattta |
200 |
Q |
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|||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
422849 |
gatgcatatatttgtaatacattggtctttttagacggtatatagattttgagagcatttgttggtgtcaagttttttttttggtcgctaagaggattta |
422750 |
T |
|
| Q |
201 |
cttacaacctttgatggatgatactgtatctgtg |
234 |
Q |
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| T |
422749 |
catacaacctttgatggatgatactctatctgtg |
422716 |
T |
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