View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15449_high_14 (Length: 482)

Name: NF15449_high_14
Description: NF15449
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15449_high_14
NF15449_high_14
[»] chr1 (54 HSPs)
chr1 (18-471)||(32359076-32359531)
chr1 (109-439)||(31117546-31117881)
chr1 (120-439)||(21516467-21516804)
chr1 (296-422)||(7274589-7274715)
chr1 (263-424)||(32602740-32602901)
chr1 (152-361)||(35272478-35272689)
chr1 (308-424)||(42747548-42747664)
chr1 (262-422)||(37131478-37131640)
chr1 (307-424)||(35058532-35058649)
chr1 (262-342)||(20004000-20004080)
chr1 (275-402)||(22593626-22593754)
chr1 (153-232)||(3160986-3161064)
chr1 (296-372)||(20791972-20792048)
chr1 (297-367)||(1415734-1415804)
chr1 (120-213)||(20791774-20791867)
chr1 (152-213)||(32348421-32348482)
chr1 (311-367)||(5951867-5951923)
chr1 (262-387)||(7583413-7583544)
chr1 (296-367)||(35926674-35926745)
chr1 (153-231)||(1714030-1714107)
chr1 (161-231)||(3949637-3949706)
chr1 (296-426)||(7097744-7097873)
chr1 (296-418)||(28736208-28736330)
chr1 (165-231)||(30173402-30173467)
chr1 (159-213)||(32602955-32603009)
chr1 (152-213)||(5923869-5923930)
chr1 (127-192)||(15801323-15801388)
chr1 (110-191)||(42747731-42747812)
chr1 (298-350)||(46315642-46315694)
chr1 (160-231)||(35058683-35058753)
chr1 (153-231)||(23908814-23908891)
chr1 (306-352)||(47326546-47326592)
chr1 (306-383)||(23805410-23805487)
chr1 (306-350)||(11823677-11823721)
chr1 (306-350)||(28314816-28314860)
chr1 (306-345)||(25365858-25365897)
chr1 (152-231)||(28870462-28870540)
chr1 (275-342)||(30418427-30418494)
chr1 (279-342)||(38322103-38322166)
chr1 (299-417)||(52596278-52596397)
chr1 (298-364)||(15188583-15188649)
chr1 (157-212)||(35926513-35926570)
chr1 (159-232)||(2774463-2774535)
chr1 (335-424)||(7781198-7781285)
chr1 (143-192)||(38321955-38322004)
chr1 (124-231)||(1415883-1415990)
chr1 (151-211)||(7460270-7460329)
chr1 (145-201)||(11611620-11611676)
chr1 (306-350)||(12014735-12014779)
chr1 (298-330)||(15942491-15942523)
chr1 (165-213)||(31795355-31795403)
chr1 (306-366)||(36021062-36021122)
chr1 (306-350)||(38624161-38624205)
chr1 (306-350)||(39325704-39325748)
[»] chr4 (51 HSPs)
chr4 (165-426)||(52831394-52831655)
chr4 (262-437)||(24418212-24418387)
chr4 (296-424)||(24474043-24474171)
chr4 (296-423)||(17425685-17425812)
chr4 (143-340)||(47789352-47789554)
chr4 (262-382)||(31736116-31736235)
chr4 (307-438)||(23051682-23051813)
chr4 (297-416)||(39276304-39276423)
chr4 (275-374)||(55723210-55723309)
chr4 (257-330)||(20988782-20988855)
chr4 (296-381)||(21501601-21501686)
chr4 (275-362)||(41963371-41963458)
chr4 (308-378)||(2733406-2733475)
chr4 (296-378)||(52986480-52986562)
chr4 (296-365)||(3535168-3535237)
chr4 (152-213)||(52327451-52327512)
chr4 (275-367)||(26552175-26552267)
chr4 (153-213)||(39276528-39276588)
chr4 (146-195)||(30070327-30070376)
chr4 (275-360)||(44555692-44555777)
chr4 (319-423)||(25885924-25886024)
chr4 (152-231)||(34812665-34812743)
chr4 (146-192)||(2103182-2103228)
chr4 (143-192)||(1162394-1162443)
chr4 (296-381)||(13615223-13615308)
chr4 (165-373)||(37713187-37713398)
chr4 (153-226)||(41173918-41173990)
chr4 (306-350)||(19801019-19801063)
chr4 (306-350)||(19801825-19801869)
chr4 (154-194)||(27611812-27611852)
chr4 (127-231)||(30802426-30802528)
chr4 (306-350)||(36181332-36181376)
chr4 (306-350)||(37114396-37114440)
chr4 (306-350)||(49335153-49335197)
chr4 (275-339)||(52327328-52327392)
chr4 (269-356)||(32474843-32474930)
chr4 (310-419)||(1162163-1162272)
chr4 (152-213)||(8130283-8130344)
chr4 (306-347)||(25687082-25687123)
chr4 (287-419)||(26026623-26026756)
chr4 (275-324)||(41758558-41758607)
chr4 (394-423)||(47789588-47789617)
chr4 (164-213)||(52986362-52986411)
chr4 (306-347)||(54683693-54683734)
chr4 (306-350)||(6287930-6287974)
chr4 (308-340)||(17896025-17896057)
chr4 (306-350)||(32012640-32012684)
chr4 (306-350)||(33984181-33984225)
chr4 (159-231)||(39033634-39033705)
chr4 (306-350)||(53284100-53284144)
chr4 (306-350)||(55001706-55001750)
[»] chr5 (50 HSPs)
chr5 (262-439)||(9004748-9004925)
chr5 (262-364)||(1621523-1621625)
chr5 (120-339)||(34640063-34640287)
chr5 (307-424)||(34639944-34640061)
chr5 (275-367)||(16869932-16870024)
chr5 (275-418)||(22028655-22028798)
chr5 (262-424)||(32882662-32882831)
chr5 (275-418)||(28363381-28363524)
chr5 (296-363)||(6462402-6462469)
chr5 (262-381)||(32826741-32826860)
chr5 (296-426)||(41892911-41893041)
chr5 (151-195)||(6462238-6462282)
chr5 (296-340)||(31812082-31812126)
chr5 (296-367)||(4283098-4283169)
chr5 (152-231)||(31806583-31806661)
chr5 (153-192)||(31812166-31812205)
chr5 (153-248)||(1015022-1015118)
chr5 (296-342)||(13838879-13838925)
chr5 (270-347)||(31677162-31677240)
chr5 (296-406)||(34639744-34639854)
chr5 (153-226)||(31677297-31677369)
chr5 (133-213)||(2942084-2942164)
chr5 (306-350)||(6789576-6789620)
chr5 (306-350)||(15498738-15498782)
chr5 (298-350)||(16218262-16218314)
chr5 (306-350)||(24171458-24171502)
chr5 (306-350)||(29525283-29525327)
chr5 (306-350)||(36761155-36761199)
chr5 (306-350)||(37530707-37530751)
chr5 (306-350)||(41734231-41734275)
chr5 (306-350)||(42422902-42422946)
chr5 (306-350)||(42709404-42709448)
chr5 (275-418)||(2941874-2942016)
chr5 (301-340)||(11863386-11863425)
chr5 (287-346)||(15120889-15120948)
chr5 (160-226)||(1621415-1621480)
chr5 (308-350)||(13359445-13359487)
chr5 (296-366)||(17259450-17259520)
chr5 (159-213)||(41892767-41892821)
chr5 (153-214)||(5390445-5390506)
chr5 (159-212)||(17259623-17259676)
chr5 (152-213)||(17902803-17902864)
chr5 (306-350)||(10815156-10815200)
chr5 (392-424)||(11653834-11653866)
chr5 (306-350)||(12280874-12280918)
chr5 (306-350)||(12939844-12939888)
chr5 (306-350)||(12953794-12953838)
chr5 (354-422)||(18336380-18336447)
chr5 (306-350)||(23590732-23590776)
chr5 (275-363)||(34590181-34590269)
[»] chr3 (45 HSPs)
chr3 (109-424)||(37334436-37334751)
chr3 (257-424)||(32645687-32645853)
chr3 (296-406)||(43822487-43822597)
chr3 (275-418)||(37083794-37083938)
chr3 (262-400)||(32326120-32326258)
chr3 (296-400)||(9198195-9198299)
chr3 (296-422)||(38684772-38684898)
chr3 (275-350)||(32117833-32117908)
chr3 (262-361)||(32582458-32582557)
chr3 (306-361)||(44539130-44539185)
chr3 (296-381)||(32109499-32109584)
chr3 (143-213)||(9780476-9780546)
chr3 (276-342)||(20873186-20873252)
chr3 (297-350)||(8879457-8879510)
chr3 (306-350)||(12122843-12122887)
chr3 (152-211)||(32645888-32645947)
chr3 (146-193)||(35696646-35696693)
chr3 (262-332)||(2948883-2948953)
chr3 (296-381)||(1384162-1384247)
chr3 (133-210)||(32325981-32326058)
chr3 (143-212)||(32582611-32582679)
chr3 (262-347)||(33674505-33674589)
chr3 (306-350)||(2557864-2557908)
chr3 (145-213)||(33674383-33674451)
chr3 (306-350)||(34435937-34435981)
chr3 (306-350)||(41991646-41991690)
chr3 (306-350)||(54463418-54463462)
chr3 (308-347)||(9558824-9558863)
chr3 (296-347)||(11041987-11042038)
chr3 (307-366)||(13800054-13800113)
chr3 (307-350)||(36237929-36237972)
chr3 (159-194)||(45021349-45021384)
chr3 (146-213)||(50882422-50882489)
chr3 (306-345)||(55226393-55226432)
chr3 (262-304)||(13799995-13800037)
chr3 (127-213)||(18084845-18084930)
chr3 (153-211)||(20873056-20873114)
chr3 (306-347)||(12764767-12764808)
chr3 (152-213)||(32117975-32118036)
chr3 (109-194)||(43822708-43822793)
chr3 (335-424)||(44947255-44947342)
chr3 (306-350)||(30317906-30317950)
chr3 (153-213)||(35682656-35682716)
chr3 (296-360)||(36879054-36879118)
chr3 (306-350)||(52184789-52184833)
[»] chr2 (41 HSPs)
chr2 (111-462)||(40909816-40910174)
chr2 (111-462)||(44984145-44984507)
chr2 (296-373)||(31062936-31063013)
chr2 (143-363)||(42139387-42139610)
chr2 (307-364)||(12238594-12238651)
chr2 (275-363)||(44810061-44810149)
chr2 (296-367)||(27679071-27679142)
chr2 (143-192)||(15804508-15804557)
chr2 (159-231)||(27863868-27863939)
chr2 (275-330)||(15804440-15804495)
chr2 (296-418)||(44809871-44809992)
chr2 (121-248)||(31063077-31063206)
chr2 (258-329)||(42034452-42034523)
chr2 (146-212)||(30804361-30804427)
chr2 (306-350)||(1875995-1876039)
chr2 (306-350)||(7454625-7454669)
chr2 (306-350)||(8875766-8875810)
chr2 (306-350)||(12160876-12160920)
chr2 (306-350)||(14958213-14958257)
chr2 (306-350)||(34245339-34245383)
chr2 (306-350)||(38324331-38324375)
chr2 (300-367)||(35189302-35189369)
chr2 (307-350)||(42519807-42519850)
chr2 (152-210)||(2346854-2346912)
chr2 (145-231)||(8752607-8752691)
chr2 (143-188)||(5946409-5946454)
chr2 (270-343)||(10911593-10911666)
chr2 (169-226)||(15967967-15968023)
chr2 (155-208)||(33625708-33625761)
chr2 (309-398)||(38808956-38809045)
chr2 (151-191)||(4549031-4549071)
chr2 (152-231)||(5505703-5505780)
chr2 (306-350)||(5774186-5774230)
chr2 (306-350)||(16496578-16496622)
chr2 (159-231)||(27679229-27679299)
chr2 (306-350)||(30523702-30523746)
chr2 (144-192)||(35442772-35442820)
chr2 (306-350)||(36936035-36936079)
chr2 (306-350)||(39241123-39241167)
chr2 (306-350)||(44525949-44525993)
chr2 (152-212)||(44810218-44810277)
[»] chr8 (47 HSPs)
chr8 (289-424)||(28444776-28444911)
chr8 (296-424)||(41470027-41470155)
chr8 (152-232)||(43408671-43408750)
chr8 (307-418)||(38288897-38289008)
chr8 (272-381)||(13895934-13896050)
chr8 (120-206)||(21367048-21367133)
chr8 (152-232)||(2111012-2111091)
chr8 (296-400)||(18892296-18892400)
chr8 (283-407)||(25019620-25019744)
chr8 (296-347)||(37740624-37740675)
chr8 (159-213)||(12524602-12524656)
chr8 (296-422)||(14243110-14243236)
chr8 (146-231)||(35764723-35764807)
chr8 (310-374)||(13544129-13544193)
chr8 (310-374)||(13680280-13680344)
chr8 (296-364)||(32467773-32467840)
chr8 (296-424)||(43408488-43408615)
chr8 (152-231)||(28947309-28947387)
chr8 (152-213)||(925997-926058)
chr8 (275-364)||(3346223-3346312)
chr8 (257-302)||(12525138-12525183)
chr8 (306-350)||(14911858-14911902)
chr8 (306-350)||(25100177-25100221)
chr8 (306-350)||(25100339-25100383)
chr8 (307-347)||(35057264-35057304)
chr8 (306-350)||(36859321-36859365)
chr8 (153-213)||(37740763-37740823)
chr8 (306-350)||(40529594-40529638)
chr8 (306-350)||(43800731-43800775)
chr8 (296-363)||(24523835-24523902)
chr8 (296-367)||(27316672-27316743)
chr8 (152-207)||(28444672-28444727)
chr8 (153-192)||(29861519-29861558)
chr8 (300-342)||(2595231-2595273)
chr8 (306-424)||(14354543-14354661)
chr8 (296-342)||(29512807-29512852)
chr8 (178-231)||(8407585-8407637)
chr8 (168-213)||(13544014-13544059)
chr8 (168-213)||(13680414-13680459)
chr8 (335-424)||(13969985-13970072)
chr8 (152-213)||(33583892-33583953)
chr8 (307-364)||(35764593-35764650)
chr8 (153-213)||(3346102-3346162)
chr8 (306-350)||(20697468-20697512)
chr8 (275-359)||(29861347-29861430)
chr8 (275-343)||(36049660-36049728)
chr8 (306-350)||(45237755-45237799)
[»] scaffold0040 (1 HSPs)
scaffold0040 (262-400)||(49873-50011)
[»] chr7 (48 HSPs)
chr7 (180-429)||(883677-883930)
chr7 (180-429)||(1243006-1243259)
chr7 (263-424)||(3836882-3837046)
chr7 (300-388)||(25659420-25659508)
chr7 (109-413)||(28175391-28175708)
chr7 (308-418)||(18654709-18654819)
chr7 (152-213)||(2525304-2525365)
chr7 (308-364)||(44235513-44235569)
chr7 (307-418)||(18654096-18654206)
chr7 (144-213)||(44235297-44235366)
chr7 (127-213)||(7379568-7379653)
chr7 (163-244)||(30046441-30046523)
chr7 (308-350)||(44818814-44818856)
chr7 (144-185)||(42967964-42968005)
chr7 (270-330)||(87266-87326)
chr7 (275-343)||(2525172-2525239)
chr7 (169-213)||(3837099-3837143)
chr7 (320-424)||(12473526-12473630)
chr7 (275-367)||(15050826-15050918)
chr7 (163-231)||(19683450-19683517)
chr7 (306-350)||(27826802-27826846)
chr7 (306-350)||(29994178-29994222)
chr7 (306-350)||(42328985-42329029)
chr7 (285-345)||(42967762-42967822)
chr7 (306-350)||(46672599-46672643)
chr7 (307-378)||(34838459-34838530)
chr7 (152-211)||(37869119-37869178)
chr7 (156-210)||(15050986-15051040)
chr7 (147-213)||(43911088-43911154)
chr7 (306-347)||(25696129-25696170)
chr7 (301-366)||(30046310-30046374)
chr7 (144-213)||(31740598-31740666)
chr7 (306-347)||(46349846-46349887)
chr7 (306-346)||(4060449-4060489)
chr7 (270-338)||(13438420-13438488)
chr7 (307-367)||(15568751-15568811)
chr7 (335-379)||(19087268-19087312)
chr7 (356-424)||(24580971-24581039)
chr7 (306-350)||(28494238-28494282)
chr7 (306-350)||(28958084-28958128)
chr7 (306-350)||(31031856-31031900)
chr7 (306-342)||(33982277-33982313)
chr7 (310-350)||(42265239-42265279)
chr7 (306-350)||(42328126-42328170)
chr7 (306-342)||(43544858-43544894)
chr7 (306-350)||(46350798-46350842)
chr7 (306-350)||(46536215-46536259)
chr7 (306-350)||(46615641-46615685)
[»] scaffold0010 (2 HSPs)
scaffold0010 (153-226)||(166742-166814)
scaffold0010 (275-367)||(166590-166680)
[»] chr6 (22 HSPs)
chr6 (275-424)||(5976572-5976720)
chr6 (165-376)||(1288292-1288501)
chr6 (152-248)||(29052677-29052773)
chr6 (153-205)||(9749801-9749853)
chr6 (297-367)||(3341104-3341174)
chr6 (275-332)||(27903901-27903958)
chr6 (165-213)||(724719-724767)
chr6 (275-331)||(9197214-9197270)
chr6 (306-350)||(12130574-12130618)
chr6 (263-347)||(17328693-17328777)
chr6 (306-350)||(21860327-21860371)
chr6 (306-350)||(24119201-24119245)
chr6 (275-330)||(724597-724652)
chr6 (164-231)||(8014427-8014493)
chr6 (307-350)||(25023418-25023461)
chr6 (258-293)||(33757725-33757760)
chr6 (152-231)||(34544422-34544500)
chr6 (306-360)||(16800436-16800490)
chr6 (306-364)||(17071804-17071862)
chr6 (308-350)||(20992229-20992271)
chr6 (159-248)||(5976750-5976842)
chr6 (306-350)||(20645751-20645795)
[»] scaffold0004 (2 HSPs)
scaffold0004 (262-343)||(339001-339081)
scaffold0004 (158-213)||(338912-338967)
[»] scaffold0330 (1 HSPs)
scaffold0330 (306-350)||(7084-7128)
[»] scaffold0022 (1 HSPs)
scaffold0022 (153-211)||(84838-84896)
[»] scaffold0325 (1 HSPs)
scaffold0325 (306-350)||(18469-18513)


Alignment Details
Target: chr1 (Bit Score: 353; Significance: 0; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 353; E-Value: 0
Query Start/End: Original strand, 18 - 471
Target Start/End: Complemental strand, 32359531 - 32359076
Alignment:
Q  18 caatcatgtagaagtcttctagtgtttggaattacaatgaatttgagagggaaatgtaagaaaagaagaagttagttttggcnnnnnnnnn--gcttata 115  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||           |||||||    
T  32359531 caatcatgtagaagtcttctagtgtttggaagtacaatgaatgtgagagggaaatgtaagaaaagaagaagttagttttggcaaaaaaaaaaagcttata 32359432  T
Q  116 gctcatgacttataaagtagcttatttctgatagtagataagctagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaaag 215  Q
    ||||||| |||||||||||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32359431 gctcatgtcttataaagtagcttattgctgatagcagataaactagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaaag 32359332  T
Q  216 atgaaatgacaaaaaatgtgcatttaattaatannnnnnnctaatcaagattgtagggataaaattgagataaaaagtgctaagctataggctacttgaa 315  Q
    |||||||||||||||||||||||||||||||||       ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  32359331 atgaaatgacaaaaaatgtgcatttaattaatatttttttctaattaagattgtagggataaaattgagataaaaagtgctaagctataggttacttgaa 32359232  T
Q  316 ttagcttatcaaaaaccgctataagctcatgaaaataagctataagctcgtgtaaaaatgacagttgcgaaacggatcttttttaatcatacgagcttat 415  Q
    ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32359231 ttagcttatcaaaaatcgctgtaagctcatgaaaataagctataagctcgtgtaaaaatgacagttgcgaaacggatcttttttaatcatacgagcttat 32359132  T
Q  416 aagctataaaccattagctcaaatccacgtctcactaaacagaccctttgtttcat 471  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  32359131 aagctataaaccattagctcaaatccacgtctcaccaaacagaccctttgtttcat 32359076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 109 - 439
Target Start/End: Original strand, 31117546 - 31117881
Alignment:
Q  109 gcttatagctcatgacttataaagtagcttatttctgatagtagataagctagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagctt 208  Q
    |||||||| | |||||||||||  ||||||||   ||| || | |||||||||||||||||||||||| |||||| ||||||||||| ||||| |||| |    
T  31117546 gcttatagttgatgacttataagctagcttatagttgagagcaaataagctagctgattgaatttgtagtgtttgataaaattagcgattgaaatagcat 31117645  T
Q  209 ataaaagatgaaatgacaaaaaa-tgtgcatttaattaatannnnnnnct---aatcaagattgtagggataaaattgagataaaaagtgctaagctata 304  Q
    |||||  |||||||||||||||| |||  ||||||||||||        |   ||| |||||||||||| ||||||||||||||||| || || ||||||    
T  31117646 ataaat-atgaaatgacaaaaaaatgtatatttaattaatatttatttttttcaattaagattgtaggggtaaaattgagataaaaattgataggctata 31117744  T
Q  305 ggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctata--agctcgtgtaaaaatgacagttgcgaaacggatcttttttaat 402  Q
     ||||||||||||| |||||||||||  ||||||||||||| ||| |||| ||||  | || |||  ||||||||| || | |||| | ||||||| | |    
T  31117745 agctacttgaattatcttatcaaaaaaagctataagctcataaaattaagttatattaacttgtgagaaaatgacaattaccaaacaggtctttttcagt 31117844  T
Q  403 catacgagcttataagctataaaccattagctcaaat 439  Q
    |||||||| |||||||| |||| |||| |||||||||    
T  31117845 catacgagattataagcaataagccataagctcaaat 31117881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 120 - 439
Target Start/End: Original strand, 21516467 - 21516804
Alignment:
Q  120 atgacttataaagtagcttatttctgatagtagataagctagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaaagatga 219  Q
    |||||||||||  ||||||||   ||||||| ||||||||||||||||||||||||  |||||||||||||||| | ||||| |||||| ||||  ||||    
T  21516467 atgacttataagctagcttatagatgatagtggataagctagctgattgaatttgttgtgtttggtaaaattagtggttgaaatagcttttaaat-atga 21516565  T
Q  220 aatgaca-----aaaaatgtgcatttaattaatannnnnnnctaatcaagattgtagggataaaattgagataaaaagtgc---------------taag 299  Q
    |||||||     ||||| ||  |||||||||| |       | ||| |||||||||||| |||||||||||||| |||||                ||||    
T  21516566 aatgacatagaaaaaaaggtatatttaattaaaaaaaaaatc-aattaagattgtaggggtaaaattgagataagaagtgacaaagctataaactttaag 21516664  T
Q  300 ctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctcgtgtaaaaatgacagttgcgaaacggatctttttt 399  Q
    ||||| | ||||||| || |||||  ||||| |||||||||||||| ||| |||| |||||||||||| |||||||||| || | ||||   ||||||||    
T  21516665 ctataagatacttgattttgcttaataaaaaacgctataagctcatcaaattaagttataagctcgtgaaaaaatgacaattaccaaacatgtctttttt 21516764  T
Q  400 aatcatacgagcttataagctataaaccattagctcaaat 439  Q
    | ||||||||||||||||||||||| |||| |||||||||    
T  21516765 agtcatacgagcttataagctataagccataagctcaaat 21516804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 296 - 422
Target Start/End: Complemental strand, 7274715 - 7274589
Alignment:
Q  296 taagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctcgtgtaaaaatgacagttgcgaaacggatctt 395  Q
    |||||||||  |||||||||||||||||||| |  || |||| |||||||||||||||| ||||||||||| ||||||||| ||||  |||||   ||||    
T  7274715 taagctataaactacttgaattagcttatcagaggccactatgagctcatgaaaataagttataagctcgtttaaaaatgatagttatgaaacaagtctt 7274616  T
Q  396 ttttaatcatacgagcttataagctat 422  Q
    |||||||||||||||||||||||||||    
T  7274615 ttttaatcatacgagcttataagctat 7274589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 263 - 424
Target Start/End: Complemental strand, 32602901 - 32602740
Alignment:
Q  263 agattgtagggataaaattgagataaaaagtgctaagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagc 362  Q
    ||||||||||| ||||||  ||||||||| || ||||||||| |||| |||||||||||||||||| |||  ||||| | ||||||||||| ||||||||    
T  32602901 agattgtaggggtaaaatgaagataaaaattgataagctataagctatttgaattagcttatcaaatacctttataaacacatgaaaataaactataagc 32602802  T
Q  363 tcgtgtaaaaatgacagttgcgaaacggatcttttttaatcatacgagcttataagctataa 424  Q
    |||||||||| ||| ||||   ||||  ||||||||||||||||  | |||||||| |||||    
T  32602801 tcgtgtaaaactgatagttagcaaacaaatcttttttaatcatataaacttataagttataa 32602740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 152 - 361
Target Start/End: Original strand, 35272478 - 35272689
Alignment:
Q  152 gataagctagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaaagatgaaatgacaaa-aaatgtgcatttaattaatann 250  Q
    ||||||||||||||||||||||||| ||||| ||||||||| || |||||||| |||| |||| ||||||||||||| ||| ||  ||||||||||||      
T  35272478 gataagctagctgattgaatttgtagtgtttagtaaaattatcggttgaagtatcttaaaaaatatgaaatgacaaataaaggtatatttaattaatatt 35272577  T
Q  251 nnnnnct--aatcaagattgtagggataaaattgagataaaaagtgctaagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaa 348  Q
          |   || ||||||| | || |||||||||||| ||||||  ||||| ||| |||||| |||||||||||||||||   ||||||||||||| ||    
T  35272578 tattttttcgattaagattgcatgggtaaaattgagat-aaaagttataagccataagctactggaattagcttatcaaaacaagctataagctcataaa 35272676  T
Q  349 aataagctataag 361  Q
    |||||||||||||    
T  35272677 aataagctataag 35272689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 308 - 424
Target Start/End: Complemental strand, 42747664 - 42747548
Alignment:
Q  308 tacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctcgtgtaaaaatgacagttgcgaaacggatcttttttaatcatac 407  Q
    ||||||||||||||||| ||||| | |||||||||||| ||| ||||||||||||| |||   ||||||||||| |  || || ||| ||||||||||||    
T  42747664 tacttgaattagcttataaaaaaacactataagctcataaaattaagctataagcttgtgagtaaatgacagttacttaatgggtctattttaatcatac 42747565  T
Q  408 gagcttataagctataa 424  Q
    |||||||||||||||||    
T  42747564 gagcttataagctataa 42747548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 262 - 422
Target Start/End: Original strand, 37131478 - 37131640
Alignment:
Q  262 aagattgtagggataaaattgagataaaaagtgctaagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataag 361  Q
    |||||||||| | ||||||  || | ||||||| ||||||||| |||||||||||||||||||||||| | | | |||| ||||||||||||| | ||||    
T  37131478 aagattgtagtggtaaaatcaagttgaaaagtgataagctataagctacttgaattagcttatcaaaagctgttgtaagttcatgaaaataaggtctaag 37131577  T
Q  362 ctcgtgtaaaaatgacagttgcgaaacggatctttttt--aatcatacgagcttataagctat 422  Q
    ||||||| |  |||| || | | |||||| ||||||||  |||||||||| ||||||||||||    
T  37131578 ctcgtgtgattatgatagctaccaaacgggtcttttttaaaatcatacgaacttataagctat 37131640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 307 - 424
Target Start/End: Complemental strand, 35058649 - 35058532
Alignment:
Q  307 ctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctcgtgtaaaaatgacagttgcgaaacggatcttttttaatcata 406  Q
    |||||||||||||||||  |||||||||||||||| | | |||||||||||||||||||||   ||||||| ||| | |||||| || | |||| |||||    
T  35058649 ctacttgaattagcttactaaaaaccgctataagcccgtaaaaataagctataagctcgtgagcaaatgactgttaccaaacgggtcatctttagtcata 35058550  T
Q  407 cgagcttataagctataa 424  Q
    |||||||||||| |||||    
T  35058549 cgagcttataagttataa 35058532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 262 - 342
Target Start/End: Complemental strand, 20004080 - 20004000
Alignment:
Q  262 aagattgtagggataaaattgagataaaaagtgctaagctataggctacttgaattagcttatcaaaaaccgctataagct 342  Q
    ||||||| |||  |||||| ||||||||| ||| ||||||||| ||||||||||||||||||||||||| |||||||||||    
T  20004080 aagattgcaggagtaaaatcgagataaaaggtgataagctataagctacttgaattagcttatcaaaaaacgctataagct 20004000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 275 - 402
Target Start/End: Original strand, 22593626 - 22593754
Alignment:
Q  275 taaaattgagataaaaagtgctaagctataggctacttgaattagcttatc-aaaaaccgctataagctcatgaaaataagctataagctcgtgtaaaaa 373  Q
    |||||||  |||||||| || ||||||||| |||||||||||||||||||| |||||| |||||||||| || ||||||||||| | |||||||  |||     
T  22593626 taaaattaggataaaaaatgataagctataagctacttgaattagcttatcgaaaaactgctataagctgataaaaataagctacaggctcgtgagaaag 22593725  T
Q  374 tgacagttgcgaaacggatcttttttaat 402  Q
    |||| ||| | |||| | |||||||||||    
T  22593726 tgacggttaccaaactggtcttttttaat 22593754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 153 - 232
Target Start/End: Complemental strand, 3161064 - 3160986
Alignment:
Q  153 ataagctagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaaagatgaaatgacaaaaaat 232  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||| |||| ||| ||| ||||||||||| |||||    
T  3161064 ataagctagctgattgaatttgtagtgtttggtaaaattaacgtttgaactagcatat-aaatatgaaatgacataaaat 3160986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 296 - 372
Target Start/End: Original strand, 20791972 - 20792048
Alignment:
Q  296 taagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctcgtgtaaaa 372  Q
    ||||||||| ||||||||||||||||||||||||||| |||| | ||||| |||||||| | |||| ||||||||||    
T  20791972 taagctataagctacttgaattagcttatcaaaaaccactatgaactcataaaaataagatgtaaggtcgtgtaaaa 20792048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 297 - 367
Target Start/End: Complemental strand, 1415804 - 1415734
Alignment:
Q  297 aagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctcgtg 367  Q
    |||||| | ||||||||||||||||||||||||| ||||||||  | || |||||||||||||||||||||    
T  1415804 aagctacaagctacttgaattagcttatcaaaaaacgctataaattaataaaaataagctataagctcgtg 1415734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 120 - 213
Target Start/End: Original strand, 20791774 - 20791867
Alignment:
Q  120 atgacttataaagtagcttatttctgatagtagataagctagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaa 213  Q
    |||||||||||  ||| ||||  || ||||| | |||||||||| | |||||||||| |||||||||||||| ||| |||||||||||||||||    
T  20791774 atgacttataagctagattatagctcatagtgggtaagctagctaactgaatttgtagtgtttggtaaaattggcgattgaagtagcttataaa 20791867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 152 - 213
Target Start/End: Complemental strand, 32348482 - 32348421
Alignment:
Q  152 gataagctagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaa 213  Q
    |||||||||| |||||||||||||| |||||||||||||||||| ||||  |||||||||||    
T  32348482 gataagctagttgattgaatttgtagtgtttggtaaaattagcggttgagctagcttataaa 32348421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 311 - 367
Target Start/End: Original strand, 5951867 - 5951923
Alignment:
Q  311 ttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctcgtg 367  Q
    |||||||||||||||  |||||||||||||||||| ||||||||||||||| |||||    
T  5951867 ttgaattagcttatctcaaaccgctataagctcataaaaataagctataagatcgtg 5951923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 262 - 387
Target Start/End: Complemental strand, 7583544 - 7583413
Alignment:
Q  262 aagattgtagggataaaattgagataaaaagtgctaagctataggct------acttgaattagcttatcaaaaaccgctataagctcatgaaaataagc 355  Q
    ||||||| |||||||||||||||||||||||||  ||| |||| |||      ||||||| |  ||||||||| | | | |||||||||| ||||||| |    
T  7583544 aagattgcagggataaaattgagataaaaagtgaaaagttataagcttaagctacttgaacttacttatcaaataacacaataagctcataaaaataaac 7583445  T
Q  356 tataagctcgtgtaaaaatgacagttgcgaaa 387  Q
    ||||||||||||  |||||||||||| |||||    
T  7583444 tataagctcgtgagaaaatgacagttacgaaa 7583413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 296 - 367
Target Start/End: Original strand, 35926674 - 35926745
Alignment:
Q  296 taagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctcgtg 367  Q
    ||||||||| ||||||||||| ||||||||||||| | ||| |||||  | |||||||||||||||||||||    
T  35926674 taagctataagctacttgaatcagcttatcaaaaaacactacaagctagtaaaaataagctataagctcgtg 35926745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 153 - 231
Target Start/End: Original strand, 1714030 - 1714107
Alignment:
Q  153 ataagctagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaaagatgaaatgacaaaaaa 231  Q
    |||||||| ||||||||||||||| ||||||||||||||| |  ||||||||| |||| ||| ||||||||||| ||||    
T  1714030 ataagctaactgattgaatttgtagtgtttggtaaaattaaccgttgaagtagtttat-aaatatgaaatgacataaaa 1714107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 3949637 - 3949706
Alignment:
Q  161 gctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaaagatgaaatgacaaaaaa 231  Q
    |||||||||||||||| |||||||||||||||||||||||| ||  |||| ||| ||||||||||| ||||    
T  3949637 gctgattgaatttgtagtgtttggtaaaattagcgtttgaactaatttat-aaatatgaaatgacataaaa 3949706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 296 - 426
Target Start/End: Original strand, 7097744 - 7097873
Alignment:
Q  296 taagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctcgtgtaaaaatgacagttgcgaaacggatctt 395  Q
    ||||||||| | ||||||||||||||||| |||||     |||||||||| ||||||| |||||||||| ||  ||||||| |||| | ||| | ||| |    
T  7097744 taagctataagatacttgaattagcttattaaaaataatcataagctcat-aaaataacctataagctcatgagaaaatgatagttaccaaatgaatcgt 7097842  T
Q  396 ttttaatcatacgagcttataagctataaac 426  Q
    ||||||| |||| || |||||||||||||||    
T  7097843 ttttaatgatacaagtttataagctataaac 7097873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 296 - 418
Target Start/End: Original strand, 28736208 - 28736330
Alignment:
Q  296 taagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctcgtgtaaaaatgacagttgcgaaacggatctt 395  Q
    ||||||||| |||||||||||||||||||| ||||  |||||||| |  | |||||||||| |||||| ||| ||||||||| ||| | |  | | ||||    
T  28736208 taagctatacgctacttgaattagcttatctaaaaatgctataagttggtaaaaataagctgtaagcttgtgaaaaaatgacggttaccaggctggtctt 28736307  T
Q  396 ttttaatcatacgagcttataag 418  Q
    ||||| ||| | |||||||||||    
T  28736308 ttttagtcaaatgagcttataag 28736330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 165 - 231
Target Start/End: Original strand, 30173402 - 30173467
Alignment:
Q  165 attgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaaagatgaaatgacaaaaaa 231  Q
    ||||||||||||||||||| ||||||||||| ||||||||| |||| ||| ||||||||||| ||||    
T  30173402 attgaatttgtaatgtttgttaaaattagcggttgaagtagtttat-aaatatgaaatgacataaaa 30173467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 159 - 213
Target Start/End: Complemental strand, 32603009 - 32602955
Alignment:
Q  159 tagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaa 213  Q
    |||||||||||||||||| ||||| |||||||||| | |||||||||||||||||    
T  32603009 tagctgattgaatttgtagtgtttagtaaaattagtggttgaagtagcttataaa 32602955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 152 - 213
Target Start/End: Complemental strand, 5923930 - 5923869
Alignment:
Q  152 gataagctagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaa 213  Q
    |||||||||||||||||||||| || |||||||||||||||  | ||||| |||||||||||    
T  5923930 gataagctagctgattgaatttttagtgtttggtaaaattaatggttgaactagcttataaa 5923869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 127 - 192
Target Start/End: Complemental strand, 15801388 - 15801323
Alignment:
Q  127 ataaagtagcttatttctgatagtagataagctagctgattgaatttgtaatgtttggtaaaatta 192  Q
    ||||| ||||||||   ||||||| |||||| |||||||||||||||| |||||||||||||||||    
T  15801388 ataaactagcttatagatgatagtggataagttagctgattgaatttgcaatgtttggtaaaatta 15801323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 110 - 191
Target Start/End: Complemental strand, 42747812 - 42747731
Alignment:
Q  110 cttatagctcatgacttataaagtagcttatttctgatagtagataagctagctgattgaatttgtaatgtttggtaaaatt 191  Q
    ||||||||| |||||||||||  ||| ||||  |||||||  |||||||||| | |||||||||||| ||||||||||||||    
T  42747812 cttatagctgatgacttataagctagtttatagctgatagaggataagctagttaattgaatttgtagtgtttggtaaaatt 42747731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 298 - 350
Target Start/End: Original strand, 46315642 - 46315694
Alignment:
Q  298 agctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    ||||||| |||||||||| |||||||||||||| || ||||||||||||||||    
T  46315642 agctataagctacttgaaatagcttatcaaaaaacgttataagctcatgaaaa 46315694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 160 - 231
Target Start/End: Complemental strand, 35058753 - 35058683
Alignment:
Q  160 agctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaaagatgaaatgacaaaaaa 231  Q
    |||||||| |||||||| |||||||||||||||||| ||||| || ||||| ||| ||||||||||| ||||    
T  35058753 agctgattaaatttgtagtgtttggtaaaattagcggttgaactaccttat-aaatatgaaatgacataaaa 35058683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 231
Target Start/End: Original strand, 23908814 - 23908891
Alignment:
Q  153 ataagctagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaaagatgaaatgacaaaaaa 231  Q
    |||||||| | ||| |||||||||||||||||| ||||||| | ||||| |||||||| ||| ||||||||||| ||||    
T  23908814 ataagctaaccgatcgaatttgtaatgtttggtgaaattagtggttgaactagcttat-aaatatgaaatgacataaaa 23908891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 306 - 352
Target Start/End: Original strand, 47326546 - 47326592
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaata 352  Q
    |||||||||| |||||| ||||||| |||||||||||||||||||||    
T  47326546 gctacttgaaatagcttttcaaaaaacgctataagctcatgaaaata 47326592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 306 - 383
Target Start/End: Complemental strand, 23805487 - 23805410
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctcgtgtaaaaatgacagttgc 383  Q
    ||||||||||| | ||| | ||||||   ||||||||||| |||||||| ||||| |||||||||||| |||||||||    
T  23805487 gctacttgaatcatcttctgaaaaactattataagctcataaaaataagttataatctcgtgtaaaaacgacagttgc 23805410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 306 - 350
Target Start/End: Complemental strand, 11823721 - 11823677
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    |||||||||| |||||| ||||||| |||||||||||||||||||    
T  11823721 gctacttgaaatagcttttcaaaaaacgctataagctcatgaaaa 11823677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 306 - 350
Target Start/End: Original strand, 28314816 - 28314860
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    |||||||||| |||||| ||||||| |||||||||||||||||||    
T  28314816 gctacttgaaatagcttttcaaaaaacgctataagctcatgaaaa 28314860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 306 - 345
Target Start/End: Complemental strand, 25365897 - 25365858
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcat 345  Q
    ||||||||||||||||| ||||||| ||||||||||||||    
T  25365897 gctacttgaattagcttttcaaaaaacgctataagctcat 25365858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 152 - 231
Target Start/End: Original strand, 28870462 - 28870540
Alignment:
Q  152 gataagctagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaaagatgaaatgacaaaaaa 231  Q
    |||||||||| | ||||||||| || ||||||||||||||| |  ||||| |||||||||||| ||||||| ||| ||||    
T  28870462 gataagctagtttattgaatttttagtgtttggtaaaattaacagttgaactagcttataaaa-atgaaattacataaaa 28870540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 275 - 342
Target Start/End: Complemental strand, 30418494 - 30418427
Alignment:
Q  275 taaaattgagataaaaagtgctaagctataggctacttgaattagcttatcaaaaaccgctataagct 342  Q
    ||||||||||||||||| || | ||||||| |||||||| |||| |||||| |||| ||||| |||||    
T  30418494 taaaattgagataaaaaatgattagctataagctacttggattaacttatccaaaaacgctacaagct 30418427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 342
Target Start/End: Original strand, 38322103 - 38322166
Alignment:
Q  279 attgagataaaaagtgctaagctataggctacttgaattagcttatcaaaaaccgctataagct 342  Q
    ||||||| ||||| || ||||||||| |||||||||| | |||||||||||| ||| |||||||    
T  38322103 attgagaaaaaaattgataagctataagctacttgaagtggcttatcaaaaaacgcaataagct 38322166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 417
Target Start/End: Original strand, 52596278 - 52596397
Alignment:
Q  299 gctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctcgtgtaaaaatgacagttgcgaaacggatc-tttt 397  Q
    |||||| ||||||||||| |||| ||||||||||||| ||||||  | |||||||||||  || || ||  |||||||| ||| | |||| | || ||||    
T  52596278 gctataagctacttgaatcagctcatcaaaaaccgctttaagctagtaaaaataagctaatagttcctgagaaaatgacggttaccaaacaggtcttttt 52596377  T
Q  398 ttaatcatacgagcttataa 417  Q
    ||||||| | ||||||||||    
T  52596378 ttaatcaaatgagcttataa 52596397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 298 - 364
Target Start/End: Original strand, 15188583 - 15188649
Alignment:
Q  298 agctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctc 364  Q
    ||||||| ||||||||||||||||  |||| ||  |||||||||| || |||||||||||| |||||    
T  15188583 agctataagctacttgaattagctcgtcaagaaatgctataagcttataaaaataagctattagctc 15188649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 157 - 212
Target Start/End: Original strand, 35926513 - 35926570
Alignment:
Q  157 gctagctgattgaatttgtaa--tgtttggtaaaattagcgtttgaagtagcttataa 212  Q
    ||||||||||||||||||||   |||||||||||||||| | ||||| ||||||||||    
T  35926513 gctagctgattgaatttgtacagtgtttggtaaaattagtggttgaactagcttataa 35926570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 232
Target Start/End: Complemental strand, 2774535 - 2774463
Alignment:
Q  159 tagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaaagatgaaatgacaaaaaat 232  Q
    ||||||||||||| ||||||||| ||||||||||||| | ||| |  ||||| ||| ||||||||||| |||||    
T  2774535 tagctgattgaatatgtaatgttaggtaaaattagcgatcgaattgacttat-aaacatgaaatgacataaaat 2774463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 424
Target Start/End: Original strand, 7781198 - 7781285
Alignment:
Q  335 tataagctcatgaaaataagctataagctcgtgtaaaaatgacagttgcgaaacggatcttttttaatcatacgagcttataagctataa 424  Q
    ||||||||| ||||| |||||||||||||||||   ||| ||||||  | |||| || ||||||| |||| |||||||||||||||||||    
T  7781198 tataagctcgtgaaa-taagctataagctcgtggtgaaaagacagtacc-aaacagagctttttttatcaaacgagcttataagctataa 7781285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 143 - 192
Target Start/End: Original strand, 38321955 - 38322004
Alignment:
Q  143 ctgatagtagataagctagctgattgaatttgtaatgtttggtaaaatta 192  Q
    |||||||| ||||| |||| || ||||||||||| |||||||||||||||    
T  38321955 ctgatagtggataaactagttgtttgaatttgtagtgtttggtaaaatta 38322004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 1415990 - 1415883
Alignment:
Q  124 cttataaagtagcttatttctgatagtagataagctagctgattgaatttgtaatgtttgg-taaaattagcgtttgaagtagcttataaaagatgaaat 222  Q
    |||||||  ||||||||  ||||||| |||| |||||| ||||| | |||||| ||||| | ||||||||||| || || ||||||||||| | ||||||    
T  1415990 cttataagctagcttatagctgatagaagatgagctaggtgatttagtttgtagtgttttgataaaattagcggttaaactagcttataaatg-tgaaat 1415892  T
Q  223 gacaaaaaa 231  Q
    |||| ||||    
T  1415891 gacataaaa 1415883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 151 - 211
Target Start/End: Complemental strand, 7460329 - 7460270
Alignment:
Q  151 agataagctagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttata 211  Q
    ||||||||||| |||||||||||||| ||||| ||||| |||||| || || |||||||||    
T  7460329 agataagctagatgattgaatttgtagtgttt-gtaaacttagcggttaaactagcttata 7460270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 145 - 201
Target Start/End: Original strand, 11611620 - 11611676
Alignment:
Q  145 gatagtagataagctagctgattgaatttgtaatgtttggtaaaattagcgtttgaa 201  Q
    |||||| |||| || | ||||||||||||| | |||||||||||||||||| |||||    
T  11611620 gatagttgatatgccatctgattgaatttgaagtgtttggtaaaattagcggttgaa 11611676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 306 - 350
Target Start/End: Complemental strand, 12014779 - 12014735
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    ||||| |||| |||||| ||||||| |||||||||||||||||||    
T  12014779 gctacctgaaatagcttttcaaaaaacgctataagctcatgaaaa 12014735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 298 - 330
Target Start/End: Original strand, 15942491 - 15942523
Alignment:
Q  298 agctataggctacttgaattagcttatcaaaaa 330  Q
    ||||||| |||||||||||||||||||||||||    
T  15942491 agctataagctacttgaattagcttatcaaaaa 15942523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 165 - 213
Target Start/End: Original strand, 31795355 - 31795403
Alignment:
Q  165 attgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaa 213  Q
    |||||||||||| |||||||||||| || || ||||| |||||||||||    
T  31795355 attgaatttgtagtgtttggtaaaactaacggttgaactagcttataaa 31795403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 306 - 366
Target Start/End: Complemental strand, 36021122 - 36021062
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctcgt 366  Q
    |||| |||||||||||||||||||   | ||||||||  | ||||||||||||||||||||    
T  36021122 gctaattgaattagcttatcaaaataagttataagctagtaaaaataagctataagctcgt 36021062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 306 - 350
Target Start/End: Complemental strand, 38624205 - 38624161
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    |||||||||| |||||| |||||||  ||||||||||||||||||    
T  38624205 gctacttgaaatagcttttcaaaaaaagctataagctcatgaaaa 38624161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 306 - 350
Target Start/End: Complemental strand, 39325748 - 39325704
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    |||||||||  |||||| ||||||| |||||||||||||||||||    
T  39325748 gctacttgatatagcttttcaaaaaacgctataagctcatgaaaa 39325704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 112; Significance: 2e-56; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 165 - 426
Target Start/End: Complemental strand, 52831655 - 52831394
Alignment:
Q  165 attgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaaagatgaaatgaca--aaaaatgtgcatttaattaatannnnnnnctaatca 262  Q
    ||||||||||||  ||| |||||||| |||| |||||||||||||||||  |||||||| ||  |||||||||||||||||||||        | ||| |    
T  52831655 attgaatttgtagagttcggtaaaatcagcgattgaagtagcttataaat-atgaaatggcataaaaaatgtgcatttaattaattttttttcc-aatta 52831558  T
Q  263 agattgtagggataaaattgagataaaaagtgctaagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagc 362  Q
    |||||| |||| | ||||||||||||||| || ||||||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||    
T  52831557 agattgcaggggtcaaattgagataaaaaatgataagctataagctacttgaattagcttatcaaaaacctttataagctcatgaaaataagctacaagc 52831458  T
Q  363 tcgtgtaaaaatgacagttgcgaaacggatcttttttaatcatacgagcttataagctataaac 426  Q
    ||||||||||||||| ||| | ||||   | ||||||||||||| |||||||||||||||||||    
T  52831457 tcgtgtaaaaatgaccgttaccaaacaagttttttttaatcatatgagcttataagctataaac 52831394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 262 - 437
Target Start/End: Original strand, 24418212 - 24418387
Alignment:
Q  262 aagattgtagggataaaattgagataaaaagtgctaagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataag 361  Q
    ||||||| |||| ||||||  ||||||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  24418212 aagattgcaggggtaaaataaagataaaaaatgataagctataagctacttgaattagcttatcaaaaaccgctataagctcaagaaaataagatataag 24418311  T
Q  362 ctcgtgtaaaaatgacagttgcgaaacggatcttttttaatcatacgagcttataagctataaaccattagctcaa 437  Q
    || |||||||||||||| ||   |||| | ||| ||||||||||| ||||| ||||| ||||| |||| |||||||    
T  24418312 cttgtgtaaaaatgacaattagcaaacaggtctcttttaatcatatgagctgataaggtataagccataagctcaa 24418387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 296 - 424
Target Start/End: Complemental strand, 24474171 - 24474043
Alignment:
Q  296 taagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctcgtgtaaaaatgacagttgcgaaacggatctt 395  Q
    ||||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||| |||| |||  ||| | |||| |||| | ||||    
T  24474171 taagctataagctacttgaattagcttataaaaaaccgctataaactcatgaaaataagatataagcccgtgcaaagctgataattgccaaacaggtctt 24474072  T
Q  396 ttttaatcatacgagcttataagctataa 424  Q
    ||||||||||| |||||||||||||||||    
T  24474071 ttttaatcatatgagcttataagctataa 24474043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 296 - 423
Target Start/End: Original strand, 17425685 - 17425812
Alignment:
Q  296 taagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctcgtgtaaaaatgacagttgcgaaacggatctt 395  Q
    ||||||||||||||||||| ||||||||| || |||||||||||||||| ||||||| ||||||||||||||| |||||| ||||| | ||||   | ||    
T  17425685 taagctataggctacttgagttagcttattaataaccgctataagctcaagaaaatacgctataagctcgtgttaaaatggcagttaccaaacaagtatt 17425784  T
Q  396 ttttaatcatacgagcttataagctata 423  Q
    ||||||||||||| |||| |||| ||||    
T  17425785 ttttaatcatacgggcttttaagatata 17425812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 143 - 340
Target Start/End: Original strand, 47789352 - 47789554
Alignment:
Q  143 ctgatagtagataagctagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaaagatgaaatgacaaaaaat---gtgcatt 239  Q
    |||||||  ||||||||| |||||||| |||||| |||||||||||||||||| ||||||| |||| ||||  | ||||||||  |||||   |||||||    
T  47789352 ctgatagcggataagctaactgattgattttgtagtgtttggtaaaattagcggttgaagttgcttctaaat-acgaaatgacctaaaatattgtgcatt 47789450  T
Q  240 taattaatannnnnnnct---aatcaagattgtagggataaaattgagataaaaagtgctaagctataggctacttgaattagcttatcaaaaaccgcta 336  Q
    |||||||||       ||   ||| ||||||| |||| | |||| |||||||| |||| ||||||||| |||||||||||||||||||| ||||||||||    
T  47789451 taattaatatttatttctttcaattaagattgcaggggttaaatggagataaatagtgataagctataagctacttgaattagcttatcgaaaaccgcta 47789550  T
Q  337 taag 340  Q
    ||||    
T  47789551 taag 47789554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 262 - 382
Target Start/End: Original strand, 31736116 - 31736235
Alignment:
Q  262 aagattgtagggataaaattgagataaaaagtgctaagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataag 361  Q
    ||||||| |||| ||||||| ||||||||| |  |||||||||  |||||||||||||||||| ||||| || |||||||||||||||||||| ||||||    
T  31736116 aagattggaggg-taaaatttagataaaaaattataagctataaactacttgaattagcttataaaaaatcgttataagctcatgaaaataagttataag 31736214  T
Q  362 ctcgtgtaaaaatgacagttg 382  Q
     | |||||| ||||| |||||    
T  31736215 tttgtgtaacaatgatagttg 31736235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 307 - 438
Target Start/End: Original strand, 23051682 - 23051813
Alignment:
Q  307 ctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctcgtgtaaaaatgacagttgcgaaacggatcttttttaatcata 406  Q
    |||||||||||||||||||| |||||||||||| ||||| |||||||||| ||||||||||  ||| |||| ||| | |||| | || |||||| ||| |    
T  23051682 ctacttgaattagcttatcacaaaccgctataaactcataaaaataagctgtaagctcgtgagaaagtgactgttaccaaacaggtcctttttagtcaaa 23051781  T
Q  407 cgagcttataagctataaaccattagctcaaa 438  Q
     | |||||||||  |||||| || ||||||||    
T  23051782 tgggcttataagacataaactataagctcaaa 23051813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 297 - 416
Target Start/End: Complemental strand, 39276423 - 39276304
Alignment:
Q  297 aagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctcgtgtaaaaatgacagttgcgaaacggatcttt 396  Q
    ||||| || ||||||||||||||||||||||||| || ||||||||  | |||||||| ||||||||||||  ||||||||||||   |||||  || ||    
T  39276423 aagctttaagctacttgaattagcttatcaaaaaacgttataagctagtaaaaataagttataagctcgtgagaaaatgacagttatcaaacgagtcatt 39276324  T
Q  397 tttaatcatacgagcttata 416  Q
    |||| ||||| |||||||||    
T  39276323 tttagtcatatgagcttata 39276304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 55723210 - 55723309
Alignment:
Q  275 taaaattgagataaaaagtgctaagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctcgtgtaaaaat 374  Q
    |||||||||||| ||||||| ||||  |||  |||||||||||||||||||| | |||||||||| ||||| ||| |||||| |||||||||| ||||||    
T  55723210 taaaattgagatgaaaagtgataagtcataaactacttgaattagcttatcacataccgctataatctcataaaattaagctttaagctcgtgaaaaaat 55723309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 257 - 330
Target Start/End: Original strand, 20988782 - 20988855
Alignment:
Q  257 taatcaagattgtagggataaaattgagataaaaagtgctaagctataggctacttgaattagcttatcaaaaa 330  Q
    |||| ||||||  |||| ||||||||||||||||| || ||||||||| |||||||||||||||||||||||||    
T  20988782 taattaagattaaagggttaaaattgagataaaaaatgataagctataagctacttgaattagcttatcaaaaa 20988855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 296 - 381
Target Start/End: Complemental strand, 21501686 - 21501601
Alignment:
Q  296 taagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctcgtgtaaaaatgacagtt 381  Q
    ||||||||| ||||||||||||||||||||||||| | ||||| |||  | |||||||||||||||||||||  ||| ||||||||    
T  21501686 taagctataagctacttgaattagcttatcaaaaaacactatatgctagtaaaaataagctataagctcgtgagaaagtgacagtt 21501601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 275 - 362
Target Start/End: Original strand, 41963371 - 41963458
Alignment:
Q  275 taaaattgagataaaaagtgctaagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagc 362  Q
    ||||||||||||| |||||| ||||||||| | ||||||||||||||||||| ||| ||||||||| ||||  | ||||| |||||||    
T  41963371 taaaattgagatacaaagtgataagctataagttacttgaattagcttatcacaaatcgctataagttcatagatataagttataagc 41963458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 308 - 378
Target Start/End: Original strand, 2733406 - 2733475
Alignment:
Q  308 tacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctcgtgtaaaaatgaca 378  Q
    |||||||||||||||||||||||| | | ||||||||| |||||||| |||||||| ||||||||||||||    
T  2733406 tacttgaattagcttatcaaaaactgat-taagctcattaaaataagttataagctggtgtaaaaatgaca 2733475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 296 - 378
Target Start/End: Original strand, 52986480 - 52986562
Alignment:
Q  296 taagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctcgtgtaaaaatgaca 378  Q
    |||||||||  ||||||||| ||||||||||||||| | ||||| |||||||||  ||| ||||| |||||||||||||||||    
T  52986480 taagctataaactacttgaactagcttatcaaaaactgttataatctcatgaaataaagttataaactcgtgtaaaaatgaca 52986562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 296 - 365
Target Start/End: Complemental strand, 3535237 - 3535168
Alignment:
Q  296 taagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctcg 365  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||| |  | |||||||||||||| ||||    
T  3535237 taagctataagctacttgaattagcttatcaaaaaacgctataagttagtaaaaataagctataaactcg 3535168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 152 - 213
Target Start/End: Complemental strand, 52327512 - 52327451
Alignment:
Q  152 gataagctagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaa 213  Q
    ||||||||||||| ||||||||||| |||||||||||||||||  ||||| |||||||||||    
T  52327512 gataagctagctggttgaatttgtagtgtttggtaaaattagcagttgaactagcttataaa 52327451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 275 - 367
Target Start/End: Original strand, 26552175 - 26552267
Alignment:
Q  275 taaaattgagataaaaagtgctaagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctcgtg 367  Q
    ||||||||||||||||| || ||| |||||||||||||||||||  |||| ||||| | ||||||||   | ||||||||||||| |||||||    
T  26552175 taaaattgagataaaaaatgataaactataggctacttgaattatgttattaaaaaactctataagccagtaaaaataagctatatgctcgtg 26552267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 153 - 213
Target Start/End: Complemental strand, 39276588 - 39276528
Alignment:
Q  153 ataagctagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaa 213  Q
    |||| ||||||||||||||||||| |||||||||||||||| | ||||| |||||||||||    
T  39276588 ataacctagctgattgaatttgtagtgtttggtaaaattagtggttgaactagcttataaa 39276528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 146 - 195
Target Start/End: Complemental strand, 30070376 - 30070327
Alignment:
Q  146 atagtagataagctagctgattgaatttgtaatgtttggtaaaattagcg 195  Q
    ||||| |||||||||||| |||||||||||| ||||||||||||||||||    
T  30070376 atagtggataagctagctaattgaatttgtagtgtttggtaaaattagcg 30070327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 275 - 360
Target Start/End: Original strand, 44555692 - 44555777
Alignment:
Q  275 taaaattgagataaaaagtgctaagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataa 360  Q
    |||||||||||||||   || ||||||||| |||||||| |||||||||||||||| ||||| |||||  | |||| |||||||||    
T  44555692 taaaattgagataaatgatgataagctataagctacttggattagcttatcaaaaaacgctaaaagctagtaaaaagaagctataa 44555777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 319 - 423
Target Start/End: Complemental strand, 25886024 - 25885924
Alignment:
Q  319 gcttatcaaaaaccgctataagctcatgaaaataagctataagctcgtgtaaaaatgacagttgcgaaacggatcttttttaatcatacgagcttataag 418  Q
    |||||||||||| | | ||||||| || |||| ||||||||||||||||| |||||||||||| | ||    || ||||||| ||||| |||||||||||    
T  25886024 gcttatcaaaaaacacgataagctaataaaaacaagctataagctcgtgtgaaaatgacagttacaaa----atgttttttagtcatatgagcttataag 25885929  T
Q  419 ctata 423  Q
     ||||    
T  25885928 ttata 25885924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 152 - 231
Target Start/End: Original strand, 34812665 - 34812743
Alignment:
Q  152 gataagctagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaaagatgaaatgacaaaaaa 231  Q
    ||||||||||||||||||||||| | ||||| |||||||| | | ||||| |||||||| ||| ||||||||||| ||||    
T  34812665 gataagctagctgattgaatttgcagtgtttagtaaaatttgtggttgaactagcttat-aaatatgaaatgacataaaa 34812743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 146 - 192
Target Start/End: Original strand, 2103182 - 2103228
Alignment:
Q  146 atagtagataagctagctgattgaatttgtaatgtttggtaaaatta 192  Q
    |||| ||||||||||||| |||||||||||| |||||||||||||||    
T  2103182 atagcagataagctagcttattgaatttgtagtgtttggtaaaatta 2103228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 143 - 192
Target Start/End: Complemental strand, 1162443 - 1162394
Alignment:
Q  143 ctgatagtagataagctagctgattgaatttgtaatgtttggtaaaatta 192  Q
    |||||||  ||||| ||||||||||||||||||||| |||||||||||||    
T  1162443 ctgatagcggataatctagctgattgaatttgtaatatttggtaaaatta 1162394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 296 - 381
Target Start/End: Original strand, 13615223 - 13615308
Alignment:
Q  296 taagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctcgtgtaaaaatgacagtt 381  Q
    ||||||||| ||||||| |||||||||||| |||| | | ||||  |||| |||||||| ||||| ||||||  ||||||||||||    
T  13615223 taagctataagctacttaaattagcttatcgaaaaacacaataatatcataaaaataaggtataaactcgtgagaaaatgacagtt 13615308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 165 - 373
Target Start/End: Complemental strand, 37713398 - 37713187
Alignment:
Q  165 attgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaaagatgaaatgacaaaaaatgtgcatttaattaatannnnnnnct---aatc 261  Q
    ||||||||||||||||| |||||||||||     ||| |||||||||||  ||||||||||||||||| | ||||| |||||||        |   |||     
T  37713398 attgaatttgtaatgttgggtaaaattagttgcggaactagcttataaat-atgaaatgacaaaaaatatacatttgattaatatctatttttttcaatt 37713300  T
Q  262 aagattgtagggataaaattgagataaaaag-tgctaagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataa 360  Q
    |||||   |||| ||||||||||| |||||  || ||||||||| |||| |||||||| |||||| | || |||||||||||  ||| || || ||||||    
T  37713299 aagatcacaggggtaaaattgagagaaaaaaatgataagctataagctatttgaattaacttatcgataaacgctataagcttgtgagaaaaaactataa 37713200  T
Q  361 gctcgtgtaaaaa 373  Q
    ||||||| |||||    
T  37713199 gctcgtgaaaaaa 37713187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 153 - 226
Target Start/End: Complemental strand, 41173990 - 41173918
Alignment:
Q  153 ataagctagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaaagatgaaatgaca 226  Q
    ||||| ||| |||||||||||||| ||||||||||||||| || ||||| |||||| | ||| |||||||||||    
T  41173990 ataagttagttgattgaatttgtattgtttggtaaaattatcgattgaactagcttgt-aaatatgaaatgaca 41173918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 306 - 350
Target Start/End: Complemental strand, 19801063 - 19801019
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    |||||||||| |||||| ||||||| |||||||||||||||||||    
T  19801063 gctacttgaaatagcttttcaaaaaacgctataagctcatgaaaa 19801019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 306 - 350
Target Start/End: Original strand, 19801825 - 19801869
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    |||||||||| |||||| ||||||| |||||||||||||||||||    
T  19801825 gctacttgaaatagcttttcaaaaaacgctataagctcatgaaaa 19801869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 194
Target Start/End: Original strand, 27611812 - 27611852
Alignment:
Q  154 taagctagctgattgaatttgtaatgtttggtaaaattagc 194  Q
    |||||||| |||||||||||||| |||||||||||||||||    
T  27611812 taagctagttgattgaatttgtagtgtttggtaaaattagc 27611852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 231
Target Start/End: Complemental strand, 30802528 - 30802426
Alignment:
Q  127 ataaagtagcttatttctgatagtagataagctagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaaagatgaaatgaca 226  Q
    ||||| ||||||||   ||||||  |||||| ||||| |||||||||||| ||||||||||||||| || ||||| || ||||| ||| |||||||||||    
T  30802528 ataaactagcttatagatgatagcggataagttagcttattgaatttgtagtgtttggtaaaatta-cgattgaattaacttat-aaatatgaaatgaca 30802431  T
Q  227 aaaaa 231  Q
     ||||    
T  30802430 taaaa 30802426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 306 - 350
Target Start/End: Original strand, 36181332 - 36181376
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    |||||||||| |||||| ||||||| |||||||||||||||||||    
T  36181332 gctacttgaaatagcttttcaaaaaacgctataagctcatgaaaa 36181376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 306 - 350
Target Start/End: Original strand, 37114396 - 37114440
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    |||||||||| |||||| ||||||| |||||||||||||||||||    
T  37114396 gctacttgaaatagcttttcaaaaaacgctataagctcatgaaaa 37114440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 306 - 350
Target Start/End: Original strand, 49335153 - 49335197
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    |||||||||| |||||| ||||||| |||||||||||||||||||    
T  49335153 gctacttgaaatagcttttcaaaaaacgctataagctcatgaaaa 49335197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 275 - 339
Target Start/End: Complemental strand, 52327392 - 52327328
Alignment:
Q  275 taaaattgagataaaaagtgctaagctataggctacttgaattagcttatcaaaaaccgctataa 339  Q
    ||||||||||| ||||| |  |||||| || ||||||||||||||||||||||||| || |||||    
T  52327392 taaaattgagagaaaaaattataagctttaagctacttgaattagcttatcaaaaaacgttataa 52327328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 356
Target Start/End: Original strand, 32474843 - 32474930
Alignment:
Q  269 tagggataaaattgagataaaaagtgctaagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagct 356  Q
    ||||||||||||||||| ||||| || || |||||| ||||||||||  |||||| |||||| | |||| | ||  ||||||||||||    
T  32474843 tagggataaaattgagagaaaaaatgataggctataagctacttgaagcagcttaccaaaaaacactatcaactagtgaaaataagct 32474930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 419
Target Start/End: Complemental strand, 1162272 - 1162163
Alignment:
Q  310 cttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctcgtgtaaaaatgacagttgcgaaacggatcttttttaatcatacga 409  Q
    ||||||||||||||||||| | ||||||||| |  | | ||||||||||||| |||||  ||| ||||  ||   |||||| || |||||| ||| ||||    
T  1162272 cttgaattagcttatcaaacaacgctataagatagtaagaataagctataagttcgtgagaaagtgacgtttattaaacgggtcctttttattcaaacga 1162173  T
Q  410 gcttataagc 419  Q
    ||||||||||    
T  1162172 gcttataagc 1162163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 213
Target Start/End: Original strand, 8130283 - 8130344
Alignment:
Q  152 gataagctagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaa 213  Q
    ||||||||||||||||||||||||| | |||| ||||  ||||  ||||| |||||||||||    
T  8130283 gataagctagctgattgaatttgtagtatttgataaagctagcagttgaactagcttataaa 8130344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 306 - 347
Target Start/End: Complemental strand, 25687123 - 25687082
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatga 347  Q
    |||||||||| |||||| ||||||| ||||||||||||||||    
T  25687123 gctacttgaaatagcttttcaaaaaacgctataagctcatga 25687082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 287 - 419
Target Start/End: Complemental strand, 26026756 - 26026623
Alignment:
Q  287 aaaaagtgctaagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctcgtgtaaaaatgacagttgcgaa 386  Q
    ||||| || |||||| || ||| |||||||||| |||||||||  |||||||||||  | ||||||||   |||||| |||  | ||||||||||   ||    
T  26026756 aaaaaatgataagctctaagctccttgaattagtttatcaaaacacgctataagctagtaaaaataagtcgtaagcttgtgagataatgacagttatcaa 26026657  T
Q  387 acggatctt-ttttaatcatacgagcttataagc 419  Q
    ||||||||| ||||| | ||| ||||||||||||    
T  26026656 acggatctttttttagtaatatgagcttataagc 26026623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 275 - 324
Target Start/End: Complemental strand, 41758607 - 41758558
Alignment:
Q  275 taaaattgagataaaaagtgctaagctataggctacttgaattagcttat 324  Q
    ||||||||||| | ||| || ||||||||| |||||||||||||||||||    
T  41758607 taaaattgagagagaaaatgataagctataagctacttgaattagcttat 41758558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 394 - 423
Target Start/End: Original strand, 47789588 - 47789617
Alignment:
Q  394 ttttttaatcatacgagcttataagctata 423  Q
    ||||||||||||||||||||||||||||||    
T  47789588 ttttttaatcatacgagcttataagctata 47789617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 213
Target Start/End: Original strand, 52986362 - 52986411
Alignment:
Q  164 gattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaa 213  Q
    |||| |||||||| ||| |||||||||||||| |||||||||||| ||||    
T  52986362 gattaaatttgtagtgtatggtaaaattagcggttgaagtagcttctaaa 52986411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 306 - 347
Target Start/End: Complemental strand, 54683734 - 54683693
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatga 347  Q
    ||||||||||||||||| ||||||| || |||||||||||||    
T  54683734 gctacttgaattagcttttcaaaaaacgttataagctcatga 54683693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 306 - 350
Target Start/End: Complemental strand, 6287974 - 6287930
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    |||||||||| |||||| ||||||| || ||||||||||||||||    
T  6287974 gctacttgaaatagcttttcaaaaaacgttataagctcatgaaaa 6287930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 308 - 340
Target Start/End: Complemental strand, 17896057 - 17896025
Alignment:
Q  308 tacttgaattagcttatcaaaaaccgctataag 340  Q
    ||||||||||||||||||||||||| |||||||    
T  17896057 tacttgaattagcttatcaaaaaccactataag 17896025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 306 - 350
Target Start/End: Complemental strand, 32012684 - 32012640
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    |||||||||| |||||| ||||||| |||||| ||||||||||||    
T  32012684 gctacttgaaatagcttttcaaaaaacgctatgagctcatgaaaa 32012640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 306 - 350
Target Start/End: Complemental strand, 33984225 - 33984181
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    |||||||||| |||||| ||||||| | |||||||||||||||||    
T  33984225 gctacttgaaatagcttttcaaaaaacactataagctcatgaaaa 33984181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 159 - 231
Target Start/End: Complemental strand, 39033705 - 39033634
Alignment:
Q  159 tagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaaagatgaaatgacaaaaaa 231  Q
    |||||||||||||||||| |||||| |||||||| || || || || |||| |||| ||||||||||| ||||    
T  39033705 tagctgattgaatttgtagtgtttgataaaattatcggttaaactaactta-aaaatatgaaatgacataaaa 39033634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 306 - 350
Target Start/End: Complemental strand, 53284144 - 53284100
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    |||||||||| |||||| ||||||| ||||| |||||||||||||    
T  53284144 gctacttgaaatagcttttcaaaaaacgctacaagctcatgaaaa 53284100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 306 - 350
Target Start/End: Original strand, 55001706 - 55001750
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    |||| ||||| |||||| ||||||| |||||||||||||||||||    
T  55001706 gctatttgaaatagcttttcaaaaaacgctataagctcatgaaaa 55001750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 95; Significance: 3e-46; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 262 - 439
Target Start/End: Complemental strand, 9004925 - 9004748
Alignment:
Q  262 aagattgtagggataaaattgagataaaaa-gtgctaagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataa 360  Q
    ||||||| || | ||||||||||||||||| ||| | ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  9004925 aagattgcagaggtaaaattgagataaaaaagtgattagctataagctacttgaattagcttatcaaaaaccgatataagctcatgaaaataagctataa 9004826  T
Q  361 gctcgtgtaaaaatgacagttgcgaaacggatcttttttaatcatacgagcttataagctataaaccattagctcaaat 439  Q
    |||||||||||| ||  |||  | |||||||| ||||||||||||||| ||||||||||||||| |||| |||| ||||    
T  9004825 gctcgtgtaaaa-tgttagtaaccaaacggatattttttaatcatacgggcttataagctataagccataagcttaaat 9004748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 262 - 364
Target Start/End: Original strand, 1621523 - 1621625
Alignment:
Q  262 aagattgtagggataaaattgagataaaaagtgctaagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataag 361  Q
    ||||||| | || ||||||||||||||||| || ||||||||| ||||||||||||||||||||||||| ||||| |||| ||| |||||||||||||||    
T  1621523 aagattgcaagggtaaaattgagataaaaactgataagctataagctacttgaattagcttatcaaaaaacgctaaaagcacataaaaataagctataag 1621622  T
Q  362 ctc 364  Q
    |||    
T  1621623 ctc 1621625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 120 - 339
Target Start/End: Complemental strand, 34640287 - 34640063
Alignment:
Q  120 atgacttataaagtagcttatttctgatagtagataagctagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaaagatga 219  Q
    ||||| |||||  ||||||||  |||||||  |||||||||||| ||||||||||||||||||||||||||||| | ||   ||||||||||||  ||||    
T  34640287 atgacctataagctagcttatagctgatagcggataagctagcttattgaatttgtaatgtttggtaaaattagtggttattgtagcttataaat-atga 34640189  T
Q  220 aatgacaaaaaa---tgtgcatttaattaatannnnnnnct--aatcaagattgta-gggataaaattgagataaaaagtgctaagctataggctacttg 313  Q
    ||||||| ||||   |||||||| ||||||||        |  |||  |||||| | ||| |||||||||||||||||||| ||| ||||| ||||||||    
T  34640188 aatgacataaaaaattgtgcattaaattaatatttattttttcaattgagattgcaaggggtaaaattgagataaaaagtgataaactataagctacttg 34640089  T
Q  314 aattagcttatcaaaaaccgctataa 339  Q
    ||||||||||| | ||||||||||||    
T  34640088 aattagcttattataaaccgctataa 34640063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 307 - 424
Target Start/End: Complemental strand, 34640061 - 34639944
Alignment:
Q  307 ctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctcgtgtaaaaatgacagttgcgaaacggatcttttttaatcata 406  Q
    |||||||||||||||||| | ||||||||||||||||||  |||||||||||||||| |||||||| | |||||| | |||| | |||||| | || |||    
T  34640061 ctacttgaattagcttattataaaccgctataagctcatagaaataagctataagcttgtgtaaaattaacagttaccaaacaggtcttttattataata 34639962  T
Q  407 cgagcttataagctataa 424  Q
    | ||||||||||||||||    
T  34639961 ccagcttataagctataa 34639944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 275 - 367
Target Start/End: Original strand, 16869932 - 16870024
Alignment:
Q  275 taaaattgagataaaaagtgctaagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctcgtg 367  Q
    ||||||||| ||||||| || ||||||||| ||||||||||||||||||||||||| |||||||||||  | |||||||| |||||| |||||    
T  16869932 taaaattgaaataaaaaatgataagctataagctacttgaattagcttatcaaaaaacgctataagctagtaaaaataaggtataagttcgtg 16870024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 275 - 418
Target Start/End: Complemental strand, 22028798 - 22028655
Alignment:
Q  275 taaaattgagataaaaagtgctaagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctcgtgtaaaaat 374  Q
    ||||| ||||||||||| || |||| |||| ||| ||||||||||||||||| ||||| || |||| |  | ||||||||||||||||| |||  ||| |    
T  22028798 taaaactgagataaaaaatgttaagttataagctgcttgaattagcttatcagaaacctctgtaagttagtaaaaataagctataagcttgtgagaaagt 22028699  T
Q  375 gacagttgcgaaacggatcttttttaatcatacgagcttataag 418  Q
    ||| ||| | |||||| ||||||||| ||| | |||||||||||    
T  22028698 gacggttaccaaacgggtcttttttagtcaaatgagcttataag 22028655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 262 - 424
Target Start/End: Complemental strand, 32882831 - 32882662
Alignment:
Q  262 aagattgtagggataaaattgagataaaaagtgc-------taagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataag 354  Q
    ||||||| |||| ||||||||||||||||||||        |||||| || |||||||||||||| |||||||||| |  ||||||||||  ||||||||    
T  32882831 aagattgcaggggtaaaattgagataaaaagtgagaagctgtaagctttaagctacttgaattagtttatcaaaaaacattataagctcaaaaaaataag 32882732  T
Q  355 ctataagctcgtgtaaaaatgacagttgcgaaacggatcttttttaatcatacgagcttataagctataa 424  Q
    |||||||||||||  ||||||||| || | |||||  ||| ||||| ||| | || |||| |||||||||    
T  32882731 ctataagctcgtgagaaaatgacaattaccaaacgagtctcttttagtcagaagaacttaaaagctataa 32882662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 275 - 418
Target Start/End: Complemental strand, 28363524 - 28363381
Alignment:
Q  275 taaaattgagataaaaagtgctaagctataggctacttgaattagcttat-caaaaaccgctataagctcatgaaaataagctataagctcgtgtaaaaa 373  Q
    ||||||||||||||||| || ||||||||| ||||||||| |||||||||  ||||| |||||||||| ||  ||||||||||||||||| |||  |||     
T  28363524 taaaattgagataaaaaatgataagctataagctacttgagttagcttataaaaaaaacgctataagc-cagtaaaataagctataagcttgtgagaaag 28363426  T
Q  374 tgacagttgcgaaacggatcttttttaatcatacgagcttataag 418  Q
    |||| ||||| ||||   |||||| || ||| | |||||||||||    
T  28363425 tgacggttgccaaacaagtcttttatagtcaaatgagcttataag 28363381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 296 - 363
Target Start/End: Original strand, 6462402 - 6462469
Alignment:
Q  296 taagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagct 363  Q
    |||| |||| ||||||||||||||||||||||||||| |||||||||  | |||||||||||||||||    
T  6462402 taagatataagctacttgaattagcttatcaaaaaccactataagctagtaaaaataagctataagct 6462469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 262 - 381
Target Start/End: Original strand, 32826741 - 32826860
Alignment:
Q  262 aagattgtagggataaaattgagataaaaagtgctaagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataag 361  Q
    ||||| ||| || ||||||||||||| |||||| ||||||||| | || ||||| |||||||||| |||||||||||| |  ||||  ||||| |||||     
T  32826741 aagatggtatgggtaaaattgagatagaaagtgataagctataagttatttgaactagcttatcacaaaccgctataaacatatgatgataagttataaa 32826840  T
Q  362 ctcgtgtaaaaatgacagtt 381  Q
    ||||||  ||||||| ||||    
T  32826841 ctcgtgctaaaatgatagtt 32826860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 296 - 426
Target Start/End: Original strand, 41892911 - 41893041
Alignment:
Q  296 taagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctcgtgtaaaaatgacagttgcgaaacggatctt 395  Q
    |||||| || ||||||||||||||||||||||||  |||||||||||  | ||||||  ||||||||| |||  | || ||| ||  | ||| |||||||    
T  41892911 taagctgtaagctacttgaattagcttatcaaaacacgctataagctagtaaaaatagactataagcttgtgagagaacgacggtgaccaaatggatctt 41893010  T
Q  396 ttttaatcatacgagcttataagctataaac 426  Q
    ||||| |||||  ||||||||||| ||||||    
T  41893011 ttttagtcatagaagcttataagccataaac 41893041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 195
Target Start/End: Original strand, 6462238 - 6462282
Alignment:
Q  151 agataagctagctgattgaatttgtaatgtttggtaaaattagcg 195  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||    
T  6462238 agataagctagctgattgaatttgtagtgtttagtaaaattagcg 6462282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 296 - 340
Target Start/End: Complemental strand, 31812126 - 31812082
Alignment:
Q  296 taagctataggctacttgaattagcttatcaaaaaccgctataag 340  Q
    ||||||||  |||||||||||||||||||||||||||||||||||    
T  31812126 taagctatgagctacttgaattagcttatcaaaaaccgctataag 31812082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 296 - 367
Target Start/End: Complemental strand, 4283169 - 4283098
Alignment:
Q  296 taagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctcgtg 367  Q
    ||||||||| |||| ||||||||||||||||||||  | |||||||   | |||||||||||||||||||||    
T  4283169 taagctataagctatttgaattagcttatcaaaaaatggtataagccagtaaaaataagctataagctcgtg 4283098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 152 - 231
Target Start/End: Original strand, 31806583 - 31806661
Alignment:
Q  152 gataagctagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaaagatgaaatgacaaaaaa 231  Q
    ||||||||||| ||||||||||||| |||||||||||||||  | ||||| || ||||| ||| ||||||||||| ||||    
T  31806583 gataagctagcagattgaatttgtattgtttggtaaaattaaggattgaactatcttat-aaatatgaaatgacataaaa 31806661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 153 - 192
Target Start/End: Complemental strand, 31812205 - 31812166
Alignment:
Q  153 ataagctagctgattgaatttgtaatgtttggtaaaatta 192  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  31812205 ataagctagctgattgaatttgtagtgtttggtaaaatta 31812166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 248
Target Start/End: Complemental strand, 1015118 - 1015022
Alignment:
Q  153 ataagctagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaaagatgaaatgac--aaaaaatgtgcatttaattaata 248  Q
    |||||||| |||||| |||||||  |||||| ||||||||  ||||||||||||| || | | ||||||||||  ||||||||| |||||||||||||    
T  1015118 ataagctaactgattaaatttgttgtgtttgataaaattaatgtttgaagtagctcat-agatatgaaatgacataaaaaatgtacatttaattaata 1015022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 296 - 342
Target Start/End: Original strand, 13838879 - 13838925
Alignment:
Q  296 taagctataggctacttgaattagcttatcaaaaaccgctataagct 342  Q
    ||||||||| |||||||||||||||| |||||||||| |||||||||    
T  13838879 taagctataagctacttgaattagctaatcaaaaaccactataagct 13838925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 347
Target Start/End: Complemental strand, 31677240 - 31677162
Alignment:
Q  270 agggataaaattgagataaaaagtgctaagctataggctactt-gaattagcttatcaaaaaccgctataagctcatga 347  Q
    |||| ||||||||||||||| | || ||||||||| |||||||  ||||| ||||||||| | ||||||||||||||||    
T  31677240 aggggtaaaattgagataaacaatgataagctataagctacttacaattaacttatcaaagaacgctataagctcatga 31677162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 296 - 406
Target Start/End: Complemental strand, 34639854 - 34639744
Alignment:
Q  296 taagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctcgtgtaaaaatgacagttgcgaaacggatctt 395  Q
    ||||||||| ||||||||||||||||||||||||   |||||||  |  | |||| ||| |||||||| |||  |||||||  ||| |||||| | ||||    
T  34639854 taagctataagctacttgaattagcttatcaaaagatgctataacatactaaaaaaaagttataagctggtgagaaaatgattgttacgaaacaggtctt 34639755  T
Q  396 ttttaatcata 406  Q
    |||||||||||    
T  34639754 ttttaatcata 34639744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 153 - 226
Target Start/End: Complemental strand, 31677369 - 31677297
Alignment:
Q  153 ataagctagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaaagatgaaatgaca 226  Q
    |||||||||||||||||||||  | |||||||||||| ||||| ||||| |||||||  ||| |||||||||||    
T  31677369 ataagctagctgattgaatttacagtgtttggtaaaactagcggttgaactagctta-caaatatgaaatgaca 31677297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 133 - 213
Target Start/End: Complemental strand, 2942164 - 2942084
Alignment:
Q  133 tagcttatttctgatagtagataagctagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaa 213  Q
    ||||||||  |||||||  |||||||||| || |||||||||||  ||||||||||||||| | ||||| || ||||||||    
T  2942164 tagcttatagctgatagcggataagctagttggttgaatttgtagggtttggtaaaattagtggttgaactaacttataaa 2942084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 306 - 350
Target Start/End: Original strand, 6789576 - 6789620
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    |||||||||| |||||| ||||||| |||||||||||||||||||    
T  6789576 gctacttgaaatagcttttcaaaaaacgctataagctcatgaaaa 6789620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 306 - 350
Target Start/End: Complemental strand, 15498782 - 15498738
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    |||||||||| |||||| ||||||| |||||||||||||||||||    
T  15498782 gctacttgaaatagcttttcaaaaaacgctataagctcatgaaaa 15498738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 298 - 350
Target Start/End: Original strand, 16218262 - 16218314
Alignment:
Q  298 agctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    ||||||| |||| ||||| |||||| ||||||| |||||||||||||||||||    
T  16218262 agctataagctatttgaaatagcttttcaaaaaacgctataagctcatgaaaa 16218314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 306 - 350
Target Start/End: Complemental strand, 24171502 - 24171458
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    |||||||||| |||||| ||||||| |||||||||||||||||||    
T  24171502 gctacttgaaatagcttttcaaaaaacgctataagctcatgaaaa 24171458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 306 - 350
Target Start/End: Original strand, 29525283 - 29525327
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    |||||||||| |||||| ||||||| |||||||||||||||||||    
T  29525283 gctacttgaaatagcttttcaaaaaacgctataagctcatgaaaa 29525327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 306 - 350
Target Start/End: Complemental strand, 36761199 - 36761155
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    |||||||||| |||||| ||||||| |||||||||||||||||||    
T  36761199 gctacttgaaatagcttttcaaaaaacgctataagctcatgaaaa 36761155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 306 - 350
Target Start/End: Original strand, 37530707 - 37530751
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    |||||||||| |||||| ||||||| |||||||||||||||||||    
T  37530707 gctacttgaaatagcttttcaaaaaacgctataagctcatgaaaa 37530751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 306 - 350
Target Start/End: Original strand, 41734231 - 41734275
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    |||||||||| |||||| ||||||| |||||||||||||||||||    
T  41734231 gctacttgaaatagcttttcaaaaaacgctataagctcatgaaaa 41734275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 306 - 350
Target Start/End: Complemental strand, 42422946 - 42422902
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    |||||||||| |||||| ||||||| |||||||||||||||||||    
T  42422946 gctacttgaaatagcttttcaaaaaacgctataagctcatgaaaa 42422902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 306 - 350
Target Start/End: Complemental strand, 42709448 - 42709404
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    |||||||||| |||||| ||||||| |||||||||||||||||||    
T  42709448 gctacttgaaatagcttttcaaaaaacgctataagctcatgaaaa 42709404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 275 - 418
Target Start/End: Complemental strand, 2942016 - 2941874
Alignment:
Q  275 taaaattgagataaaaagtgctaagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctcgtgtaaaaat 374  Q
    |||||||||||||||   || |||||| || |||| ||| ||||||||||||||||  || |||||||  | ||||||||||||| |||| || | ||||    
T  2942016 taaaattgagataaaggatgataagctctaagctatttggattagcttatcaaaaaatgcaataagctagtaaaaataagctatatgctcatg-acaaat 2941918  T
Q  375 gacagttgcgaaacggatcttttttaatcatacgagcttataag 418  Q
    | | ||| | |||||| | ||||||| ||| | |||||||||||    
T  2941917 ggcggttaccaaacgggtgttttttagtcaaatgagcttataag 2941874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 301 - 340
Target Start/End: Original strand, 11863386 - 11863425
Alignment:
Q  301 tataggctacttgaattagcttatcaaaaaccgctataag 340  Q
    |||| |||||||||||||||||||||||||||| ||||||    
T  11863386 tataagctacttgaattagcttatcaaaaaccgatataag 11863425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 346
Target Start/End: Original strand, 15120889 - 15120948
Alignment:
Q  287 aaaaagtgctaagctataggctacttgaattagcttatcaaaaaccgctataagctcatg 346  Q
    ||||| || ||||||||| ||||  ||| ||||||||||||||| |||||||||||||||    
T  15120889 aaaaaatgataagctataagctatgtgagttagcttatcaaaaaacgctataagctcatg 15120948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 160 - 226
Target Start/End: Original strand, 1621415 - 1621480
Alignment:
Q  160 agctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaaagatgaaatgaca 226  Q
    ||||||||||| || |||| |  ||||||||||||| |||||||||||||| ||| |||||||||||    
T  1621415 agctgattgaacttataatatccggtaaaattagcggttgaagtagcttat-aaatatgaaatgaca 1621480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 308 - 350
Target Start/End: Original strand, 13359445 - 13359487
Alignment:
Q  308 tacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    |||||||| |||||| ||||||| |||||||||||||||||||    
T  13359445 tacttgaaatagcttttcaaaaaacgctataagctcatgaaaa 13359487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 296 - 366
Target Start/End: Complemental strand, 17259520 - 17259450
Alignment:
Q  296 taagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctcgt 366  Q
    |||||||||  |||||||||||| ||||| ||||| |||||||||||  |||| |||| || |||||||||    
T  17259520 taagctataatctacttgaattaacttataaaaaaacgctataagctagtgaatataatctttaagctcgt 17259450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 41892767 - 41892821
Alignment:
Q  159 tagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaa 213  Q
    |||||||||||||||||| ||||||||| ||||| || || || |||||||||||    
T  41892767 tagctgattgaatttgtagtgtttggtataattaacggttaaactagcttataaa 41892821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 214
Target Start/End: Complemental strand, 5390506 - 5390445
Alignment:
Q  153 ataagctagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaaa 214  Q
    ||||| ||||| |||||||||||| |||||||| |||| |||| ||||| |||||| |||||    
T  5390506 ataaggtagctaattgaatttgtagtgtttggttaaatgagcggttgaactagcttctaaaa 5390445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 212
Target Start/End: Complemental strand, 17259676 - 17259623
Alignment:
Q  159 tagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataa 212  Q
    |||||||||||||||| | || || |||||||||||| ||||| ||||||||||    
T  17259676 tagctgattgaatttgcagtggttagtaaaattagcggttgaactagcttataa 17259623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 213
Target Start/End: Complemental strand, 17902864 - 17902803
Alignment:
Q  152 gataagctagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaa 213  Q
    ||||| |||| ||||| |||||||| |||||||||||| ||||  ||||| |||||||||||    
T  17902864 gataaactagttgattaaatttgtagtgtttggtaaaactagcagttgaactagcttataaa 17902803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 306 - 350
Target Start/End: Complemental strand, 10815200 - 10815156
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    |||||||||| |||||| |||||||  ||||||||||||||||||    
T  10815200 gctacttgaaatagcttttcaaaaaatgctataagctcatgaaaa 10815156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 392 - 424
Target Start/End: Original strand, 11653834 - 11653866
Alignment:
Q  392 tcttttttaatcatacgagcttataagctataa 424  Q
    ||||||||||||||||||| |||||||||||||    
T  11653834 tcttttttaatcatacgagattataagctataa 11653866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 306 - 350
Target Start/End: Complemental strand, 12280918 - 12280874
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    ||||||| || |||||| ||||||| |||||||||||||||||||    
T  12280918 gctacttaaaatagcttttcaaaaaacgctataagctcatgaaaa 12280874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 306 - 350
Target Start/End: Original strand, 12939844 - 12939888
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    |||| ||||| |||||| ||||||| |||||||||||||||||||    
T  12939844 gctatttgaaatagcttttcaaaaaacgctataagctcatgaaaa 12939888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 306 - 350
Target Start/End: Original strand, 12953794 - 12953838
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    |||| ||||| |||||| ||||||| |||||||||||||||||||    
T  12953794 gctatttgaaatagcttttcaaaaaacgctataagctcatgaaaa 12953838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 354 - 422
Target Start/End: Complemental strand, 18336447 - 18336380
Alignment:
Q  354 gctataagctcgtgtaaaaatgacagttgcgaaacggatcttttttaatcatacgagcttataagctat 422  Q
    ||||||||| | ||||||||| |||||| | |||| | ||||||| ||||||||||||||||| |||||    
T  18336447 gctataagcacatgtaaaaataacagttaccaaacaggtcttttt-aatcatacgagcttatatgctat 18336380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 306 - 350
Target Start/End: Complemental strand, 23590776 - 23590732
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    |||||||||| |||||| |||||||  ||||||||||||||||||    
T  23590776 gctacttgaaatagcttttcaaaaaatgctataagctcatgaaaa 23590732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 275 - 363
Target Start/End: Original strand, 34590181 - 34590269
Alignment:
Q  275 taaaattgagataaaaagtgctaagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagct 363  Q
    ||||||||||||||||   | |||||| || ||||||  ||||||||||| ||||| ||||||||| |  | ||||||||||| |||||    
T  34590181 taaaattgagataaaagacgttaagctttaagctactcaaattagcttataaaaaaacgctataagttggtaaaaataagctacaagct 34590269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 90; Significance: 3e-43; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 109 - 424
Target Start/End: Complemental strand, 37334751 - 37334436
Alignment:
Q  109 gcttatagctcatgacttataaagtagcttatttctgatagtagataagctagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagctt 208  Q
    |||||||| | |||||||| |||  |||||||   || ||| ||||||||||| ||||||||| || | |||||| |||||||||||  | ||||||| |    
T  37334751 gcttatagttgatgacttagaaaccagcttatagttggtagcagataagctagttgattgaatatgcagtgtttgataaaattagcgactaaagtagcat 37334652  T
Q  209 ataaaagatgaaatgacaa--aaaatgtgcatttaattaatannnnnnnctaatcaagattgtagggataaaattgagataaaaagtgctaagctatagg 306  Q
    |||||  |||||||||||   |||||||||||| ||||||||       | ||| ||||||| | ||||||||||||||||||||| |  |||||||| |    
T  37334651 ataaat-atgaaatgacatcgaaaatgtgcattaaattaatatttttttc-aattaagattgcacggataaaattgagataaaaagcgaaaagctataag 37334554  T
Q  307 ctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctcgtgtaaaaatgacagttgcgaaacggatcttttttaatcata 406  Q
    |||| ||| ||||||||| | |||||  |||||||||||||||||  ||||||| ||||||||||||||||||||   |||| | |||||||||||||||    
T  37334553 ctacgtgagttagcttataataaaccattataagctcatgaaaatctgctataaactcgtgtaaaaatgacagttatcaaaccggtcttttttaatcata 37334454  T
Q  407 cgagcttataagctataa 424  Q
    | |||||||||| |||||    
T  37334453 caagcttataagatataa 37334436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 257 - 424
Target Start/End: Complemental strand, 32645853 - 32645687
Alignment:
Q  257 taatcaagattgtagggataaaattgagataaaaagtgctaagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagct 356  Q
    |||| ||||||| || | |||||| ||||||||||||| |||||| || ||||||||| ||| |||||||||| ||||||||||||||| ||||||| ||    
T  32645853 taattaagattggagtggtaaaatggagataaaaagtgataagctttaagctacttgacttaacttatcaaaa-ccgctataagctcattaaaataaact 32645755  T
Q  357 ataagctcgtgtaaaaatgacagttgcgaaacggatcttttttaatcatacgagcttataagctataa 424  Q
    |||||||||||||||||||||| || | ||||   ||||||||||||| |||||||||||| ||||||    
T  32645754 ataagctcgtgtaaaaatgacaattactaaacaactcttttttaatcacacgagcttataaactataa 32645687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 296 - 406
Target Start/End: Complemental strand, 43822597 - 43822487
Alignment:
Q  296 taagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctcgtgtaaaaatgacagttgcgaaacggatctt 395  Q
    |||||| || ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||||||||| || | |||||||||||    
T  43822597 taagctttaagctacttgaattagcttatcaaaaaccactataatctcatgaaaataagctataagcttgtgtaaaaatgacaattaccaaacggatctt 43822498  T
Q  396 ttttaatcata 406  Q
    |||||||||||    
T  43822497 ttttaatcata 43822487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 275 - 418
Target Start/End: Complemental strand, 37083938 - 37083794
Alignment:
Q  275 taaaattgagataaaaag-tgctaagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctcgtgtaaaaa 373  Q
    |||||||| ||||||||  || ||||||||| ||||||||||||||||||| |||||  ||||||||||  | |||||||||||||||||||||  |||     
T  37083938 taaaattgtgataaaaatatgataagctataagctacttgaattagcttattaaaaattgctataagctagtaaaaataagctataagctcgtgagaaag 37083839  T
Q  374 tgacagttgcgaaacggatcttttttaatcatacgagcttataag 418  Q
    |||||||| |  ||||  ||||||||||||| | |||||||||||    
T  37083838 tgacagttacctaacgtgtcttttttaatcaaatgagcttataag 37083794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 262 - 400
Target Start/End: Original strand, 32326120 - 32326258
Alignment:
Q  262 aagattgtagggataaaattgagataaaaagtgctaagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataag 361  Q
    ||||||| |||| ||||||||| ||||| | || ||||||||| ||||||||||||||||||||||||||| |||||||||  | ||||||||||| |||    
T  32326120 aagattgcaggggtaaaattgatataaataatgataagctataagctacttgaattagcttatcaaaaacctctataagctagtaaaaataagctacaag 32326219  T
Q  362 ctcgtgtaaaaatgacagttgcgaaacggatctttttta 400  Q
    || |||  ||| |||| | | | |||||| |||||||||    
T  32326220 cttgtgagaaagtgacggataccaaacgggtctttttta 32326258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 296 - 400
Target Start/End: Original strand, 9198195 - 9198299
Alignment:
Q  296 taagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctcgtgtaaaaatgacagttgcgaaacggatctt 395  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||  | |||||||||| ||||||||||  ||| |||| ||| | |||||| ||||    
T  9198195 taagctaaaagctacttgaattagcttatcaaaaaccgctataagctagtaaaaataagctttaagctcgtgagaaagtgacggttactaaacgggtctt 9198294  T
Q  396 tttta 400  Q
    |||||    
T  9198295 tttta 9198299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 296 - 422
Target Start/End: Original strand, 38684772 - 38684898
Alignment:
Q  296 taagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctcgtgtaaaaatgacagttgcgaaacggatctt 395  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||  | |||||||  || |||||| ||  |||||||| ||| | |||||||||||    
T  38684772 taagctataagctacttgaattagcttatcaaaaaacgctataagctagtaaaaataatttacaagctcctgagaaaatgacggttaccaaacggatctt 38684871  T
Q  396 ttttaatcatacgagcttataagctat 422  Q
    ||| | ||||| || || |||||||||    
T  38684872 tttcagtcatatgaactgataagctat 38684898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 275 - 350
Target Start/End: Complemental strand, 32117908 - 32117833
Alignment:
Q  275 taaaattgagataaaaagtgctaagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    ||||||| ||||||||| || ||||||||  | ||||||||||||||||||||||| | |||||||||||||||||    
T  32117908 taaaatttagataaaaaatgataagctatcaggtacttgaattagcttatcaaaaaactctataagctcatgaaaa 32117833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 262 - 361
Target Start/End: Complemental strand, 32582557 - 32582458
Alignment:
Q  262 aagattgtagggataaaattgagataaaaagtgctaagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataag 361  Q
    ||||||| | || |||||||||||||||||||| ||||||||| |||| ||||| |  |||||||||||  ||||||||||  | |||||||||||||||    
T  32582557 aagattgcaagggtaaaattgagataaaaagtgataagctataagctagttgaactgccttatcaaaaaaggctataagctagtaaaaataagctataag 32582458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 306 - 361
Target Start/End: Complemental strand, 44539185 - 44539130
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataag 361  Q
    ||||||||||||||||||||||||||| ||||||||| |||||| |||||||||||    
T  44539185 gctacttgaattagcttatcaaaaaccactataagcttatgaaagtaagctataag 44539130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 296 - 381
Target Start/End: Complemental strand, 32109584 - 32109499
Alignment:
Q  296 taagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctcgtgtaaaaatgacagtt 381  Q
    ||||||||| |||||||||||||||||||||||||  ||| ||||||  | |||||||||||||||||| ||  ||| ||||||||    
T  32109584 taagctataagctacttgaattagcttatcaaaaattgctttaagcttttaaaaataagctataagctcatgggaaagtgacagtt 32109499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 143 - 213
Target Start/End: Original strand, 9780476 - 9780546
Alignment:
Q  143 ctgatagtagataagctagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaa 213  Q
    |||||||| |||||| || ||||||| ||||||||||||||||||||||| || ||||| ||| |||||||    
T  9780476 ctgatagttgataagttaactgattggatttgtaatgtttggtaaaattaacggttgaactagtttataaa 9780546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 276 - 342
Target Start/End: Original strand, 20873186 - 20873252
Alignment:
Q  276 aaaattgagataaaaagtgctaagctataggctacttgaattagcttatcaaaaaccgctataagct 342  Q
    ||||||| |||||| | || ||||||||| | ||||||||||||||||||||||||| |||||||||    
T  20873186 aaaattgggataaataatgataagctataagttacttgaattagcttatcaaaaaccactataagct 20873252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 297 - 350
Target Start/End: Complemental strand, 8879510 - 8879457
Alignment:
Q  297 aagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    ||||||| ||||||||||| |||||| ||||||| |||||||||||||||||||    
T  8879510 aagctatcggctacttgaaatagcttttcaaaaaacgctataagctcatgaaaa 8879457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 306 - 350
Target Start/End: Original strand, 12122843 - 12122887
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||    
T  12122843 gctacttgaattagcttatcaaaaaacgctataagctaatgaaaa 12122887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 152 - 211
Target Start/End: Complemental strand, 32645947 - 32645888
Alignment:
Q  152 gataagctagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttata 211  Q
    ||||||||| | | ||||||||||||||||||||||| |||| | |||||||||||||||    
T  32645947 gataagctaaccggttgaatttgtaatgtttggtaaatttagtggttgaagtagcttata 32645888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 146 - 193
Target Start/End: Complemental strand, 35696693 - 35696646
Alignment:
Q  146 atagtagataagctagctgattgaatttgtaatgtttggtaaaattag 193  Q
    ||||| ||||||||||| ||||||||||||| ||||||||||||||||    
T  35696693 atagtggataagctagcagattgaatttgtagtgtttggtaaaattag 35696646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 262 - 332
Target Start/End: Original strand, 2948883 - 2948953
Alignment:
Q  262 aagattgtagggataaaattgagataaaaagtgctaagctataggctacttgaattagcttatcaaaaacc 332  Q
    ||||||| | |||||||||| ||||||||| |  ||||||||| ||||||||||||| ||||||| |||||    
T  2948883 aagattgcaaggataaaatttagataaaaaataataagctataagctacttgaattaacttatcacaaacc 2948953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 296 - 381
Target Start/End: Complemental strand, 1384247 - 1384162
Alignment:
Q  296 taagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctcgtgtaaaaatgacagtt 381  Q
    ||||||||| ||||||||| |||   ||||||||| ||| ||||||| || ||||||||| ||||||| |||  ||||||||||||    
T  1384247 taagctataagctacttgagttaatctatcaaaaaacgcgataagcttataaaaataagcaataagcttgtgataaaatgacagtt 1384162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 133 - 210
Target Start/End: Original strand, 32325981 - 32326058
Alignment:
Q  133 tagcttatttctgatagtagataagctagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttat 210  Q
    ||||||||  || ||||| |||||||||| |||| ||||||||| ||||||||||||||||   ||||| ||||||||    
T  32325981 tagcttatagctaatagtggataagctagttgatggaatttgtagtgtttggtaaaattagtagttgaactagcttat 32326058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 143 - 212
Target Start/End: Complemental strand, 32582679 - 32582611
Alignment:
Q  143 ctgatagtagataagctagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataa 212  Q
    |||||||  ||||| |||| |||||||||||||| |||||||||||||||||   |||||||||||||||    
T  32582679 ctgatagctgataacctagttgattgaatttgtagtgtttggtaaaattagc-cgtgaagtagcttataa 32582611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 262 - 347
Target Start/End: Original strand, 33674505 - 33674589
Alignment:
Q  262 aagattgtagggataaaattgagataaaaagtgctaagctataggctacttgaattagcttatcaaaaaccgctataagctcatga 347  Q
    ||||| |||||| ||||||||||||||| | |  |||| |||| ||||||||||| |||||||| ||||| | |||||||||||||    
T  33674505 aagatggtaggggtaaaattgagataaataata-taagttataagctacttgaatcagcttatcgaaaactgttataagctcatga 33674589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 306 - 350
Target Start/End: Original strand, 2557864 - 2557908
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    |||||||||| |||||| ||||||| |||||||||||||||||||    
T  2557864 gctacttgaaatagcttttcaaaaaacgctataagctcatgaaaa 2557908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 145 - 213
Target Start/End: Original strand, 33674383 - 33674451
Alignment:
Q  145 gatagtagataagctagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaa 213  Q
    |||||| |||||||||||| |||||||||||| |||||| |||||| |||  ||||| ||||| |||||    
T  33674383 gatagttgataagctagctcattgaatttgtagtgtttgctaaaatcagcagttgaactagctcataaa 33674451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 306 - 350
Target Start/End: Original strand, 34435937 - 34435981
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    |||||||||| |||||| ||||||| |||||||||||||||||||    
T  34435937 gctacttgaaatagcttttcaaaaaacgctataagctcatgaaaa 34435981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 306 - 350
Target Start/End: Original strand, 41991646 - 41991690
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    |||||||||| |||||| ||||||| |||||||||||||||||||    
T  41991646 gctacttgaaatagcttttcaaaaaacgctataagctcatgaaaa 41991690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 306 - 350
Target Start/End: Original strand, 54463418 - 54463462
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    |||||||||| |||||| ||||||| |||||||||||||||||||    
T  54463418 gctacttgaaatagcttttcaaaaaacgctataagctcatgaaaa 54463462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 308 - 347
Target Start/End: Original strand, 9558824 - 9558863
Alignment:
Q  308 tacttgaattagcttatcaaaaaccgctataagctcatga 347  Q
    |||||||||||| |||||||||| ||||||||||||||||    
T  9558824 tacttgaattagattatcaaaaaacgctataagctcatga 9558863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 296 - 347
Target Start/End: Complemental strand, 11042038 - 11041987
Alignment:
Q  296 taagctataggctacttgaattagcttatcaaaaaccgctataagctcatga 347  Q
    |||||||||  ||||||||||||||||||| || | ||||||||||||||||    
T  11042038 taagctataaactacttgaattagcttatctaagaacgctataagctcatga 11041987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 307 - 366
Target Start/End: Original strand, 13800054 - 13800113
Alignment:
Q  307 ctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctcgt 366  Q
    |||||||||||| ||||| ||||| |||||||||  ||| || |||||||||||||||||    
T  13800054 ctacttgaattaacttatgaaaaaacgctataagaccataaagataagctataagctcgt 13800113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 307 - 350
Target Start/End: Complemental strand, 36237972 - 36237929
Alignment:
Q  307 ctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    ||||||||| |||||| ||||||| |||||||||||||||||||    
T  36237972 ctacttgaaatagcttttcaaaaaacgctataagctcatgaaaa 36237929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 194
Target Start/End: Original strand, 45021349 - 45021384
Alignment:
Q  159 tagctgattgaatttgtaatgtttggtaaaattagc 194  Q
    |||||||||||||||||| |||||||||||||||||    
T  45021349 tagctgattgaatttgtagtgtttggtaaaattagc 45021384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 146 - 213
Target Start/End: Complemental strand, 50882489 - 50882422
Alignment:
Q  146 atagtagataagctagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaa 213  Q
    |||||| ||| ||||| ||||| |||||||| || |||||||||||||||  |||| |||||||||||    
T  50882489 atagtacataggctagttgatttaatttgtagtgattggtaaaattagcggctgaactagcttataaa 50882422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 306 - 345
Target Start/End: Complemental strand, 55226432 - 55226393
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcat 345  Q
    ||||||||||||||||| ||||||| ||||||||||||||    
T  55226432 gctacttgaattagcttttcaaaaaacgctataagctcat 55226393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 262 - 304
Target Start/End: Original strand, 13799995 - 13800037
Alignment:
Q  262 aagattgtagggataaaattgagataaaaagtgctaagctata 304  Q
    ||||||| |||| |||||||||||||||||||| |||||||||    
T  13799995 aagattgcaggggtaaaattgagataaaaagtgataagctata 13800037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 18084845 - 18084930
Alignment:
Q  127 ataaagtagcttatttctgatagtagataagctagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaa 213  Q
    ||||| ||||||||   ||||||  |||||| |||||||||||||||| | ||||||||||||||| || ||||| || ||||||||    
T  18084845 ataaactagcttatagatgatagcggataagttagctgattgaatttgcagtgtttggtaaaatta-cgattgaattaacttataaa 18084930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 153 - 211
Target Start/End: Original strand, 20873056 - 20873114
Alignment:
Q  153 ataagctagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttata 211  Q
    ||||| ||||| ||||||||| || ||||||||||||| |||| |||||||| ||||||    
T  20873056 ataagttagcttattgaatttttagtgtttggtaaaatcagcggttgaagtaacttata 20873114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 306 - 347
Target Start/End: Complemental strand, 12764808 - 12764767
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatga 347  Q
    |||||||||| |||||| ||||||| ||||||||||||||||    
T  12764808 gctacttgaaatagcttttcaaaaatcgctataagctcatga 12764767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 213
Target Start/End: Complemental strand, 32118036 - 32117975
Alignment:
Q  152 gataagctagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaa 213  Q
    |||||||||||||| ||||||| || |||||||||| ||||||   |||| |||||||||||    
T  32118036 gataagctagctgactgaatttttagtgtttggtaagattagcagctgaactagcttataaa 32117975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 194
Target Start/End: Complemental strand, 43822793 - 43822708
Alignment:
Q  109 gcttatagctcatgacttataaagtagcttatttctgatagtagataagctagctgattgaatttgtaatgtttggtaaaattagc 194  Q
    |||||||||  |||||| ||||  ||||||||  |||||||  ||||| |||||| |||||||||| | |||||||||||| ||||    
T  43822793 gcttatagcggatgactgataagctagcttatagctgatagcggataaactagctaattgaatttgaagtgtttggtaaaactagc 43822708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 424
Target Start/End: Original strand, 44947255 - 44947342
Alignment:
Q  335 tataagctcatgaaaataagctataagctcgtgtaaaaatgacagttgcgaaacggatcttttttaatcatacgagcttataagctataa 424  Q
    ||||||||| ||||| |||||||||||||||||   ||| ||||||  | |||| || ||||||| |||| |||||||||||||||||||    
T  44947255 tataagctcgtgaaa-taagctataagctcgtggtgaaaagacagtacc-aaacagagctttttttatcaaacgagcttataagctataa 44947342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 306 - 350
Target Start/End: Original strand, 30317906 - 30317950
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    |||||||||| ||| || ||||||| |||||||||||||||||||    
T  30317906 gctacttgaaatagattttcaaaaaacgctataagctcatgaaaa 30317950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 153 - 213
Target Start/End: Complemental strand, 35682716 - 35682656
Alignment:
Q  153 ataagctagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaa 213  Q
    ||||||||  |||||||||||||| |||||||||||| ||| | || || |||||||||||    
T  35682716 ataagctaattgattgaatttgtagtgtttggtaaaactagagatttaattagcttataaa 35682656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 296 - 360
Target Start/End: Original strand, 36879054 - 36879118
Alignment:
Q  296 taagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataa 360  Q
    |||||| || ||||||||||||||||||| |||||  ||||||||||  | |||||||| |||||    
T  36879054 taagctctaagctacttgaattagcttataaaaaaatgctataagctagtaaaaataagttataa 36879118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 306 - 350
Target Start/End: Original strand, 52184789 - 52184833
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    ||||||| || |||||| ||||||| |||||||||||||||||||    
T  52184789 gctacttaaaatagcttttcaaaaaacgctataagctcatgaaaa 52184833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 89; Significance: 1e-42; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 111 - 462
Target Start/End: Complemental strand, 40910174 - 40909816
Alignment:
Q  111 ttatagctcatgacttataaagtagcttatttctgatagtagataagctagctgattgaatttgtaatgtttggtaa---aattagcgtttgaagtagct 207  Q
    |||||||  |||||||||||  ||||||||  |||||||| ||||||||||| |||| |||||||| ||||| ||||   |||||||| || ||||| ||    
T  40910174 ttatagcagatgacttataagttagcttatagctgatagtggataagctagcagattcaatttgtagtgttttgtaataaaattagcggttaaagtacct 40910075  T
Q  208 tataaaagatgaaatgaca---aaaaatgtgcatttaattaatannnnnnncta--atcaagattg-tagggataaaattgagataaaaagtgctaagct 301  Q
    ||||||  |||||||||||   ||||||||||||||||||  ||        |   || ||||||  ||||| |||||||||||||||||||| ||| ||    
T  40910074 tataaat-atgaaatgacataaaaaaatgtgcatttaatttttatttttttttccgattaagattactaggg-taaaattgagataaaaagtgataacct 40909977  T
Q  302 ataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctcgtgtaaaaatgacagttgcgaaacggatcttttttaa 401  Q
    |||  |||||||||||||||||||||||| || |||||||||||||||||||| |||||||| || |  | ||||||||| | |||| | | ||||||||    
T  40909976 ataaactacttgaattagcttatcaaaaaacgttataagctcatgaaaataagttataagcttgtcttcagatgacagttaccaaactggtattttttaa 40909877  T
Q  402 tcatacgagcttataagctataaaccattagctcaaatccacgtctcactaaacagaccct 462  Q
    |||||| |||||||||||||||| ||||  |||||| |  | |||| ||||||||||||||    
T  40909876 tcatacaagcttataagctataagccatacgctcaactttatgtcttactaaacagaccct 40909816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 111 - 462
Target Start/End: Original strand, 44984145 - 44984507
Alignment:
Q  111 ttatagctcatgacttataaagtagcttatttctgatagtagataagctagctgattgaatttgtaatgtttggtaa---aattagcgtttgaagtagct 207  Q
    |||||||  |||||||||||  ||||||||  |||||||| ||||||||||| |||| |||||||| ||||| ||||   |||||||| || ||||| ||    
T  44984145 ttatagcagatgacttataagttagcttatagctgatagtggataagctagcagattcaatttgtagtgttttgtaataaaattagcggttaaagtacct 44984244  T
Q  208 tataaaagatgaaatgaca---aaaaatgtgcatttaattaatannnnnnncta------atcaagattg-tagggataaaattgagataaaaagtgcta 297  Q
    ||||||  |||||||||||   ||||||||||||||||||||||        |       || ||||||  ||||| |||||||||||||||||||| ||    
T  44984245 tataaat-atgaaatgacataaaaaaatgtgcatttaattaatatttatttattttttcgattaagattactaggg-taaaattgagataaaaagtgata 44984342  T
Q  298 agctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctcgtgtaaaaatgacagttgcgaaacggatctttt 397  Q
    | ||||| ||||||||||||||||||||||||| || ||||||||| |||||||||| |||||||| || |  | ||||||||| | |||| | | ||||    
T  44984343 acctataagctacttgaattagcttatcaaaaaacgttataagctcgtgaaaataagttataagcttgtcttcagatgacagttaccaaactggtatttt 44984442  T
Q  398 ttaatcatacgagcttataagctataaaccattagctcaaatccacgtctcactaaacagaccct 462  Q
    |||||||||| ||||||||||||| || ||||  |||||| |  | |||| ||||||||||||||    
T  44984443 ttaatcatacaagcttataagctacaagccatacgctcaactttatgtcttactaaacagaccct 44984507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 296 - 373
Target Start/End: Complemental strand, 31063013 - 31062936
Alignment:
Q  296 taagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctcgtgtaaaaa 373  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||||    
T  31063013 taagctataagctacttgaaatagcttatcaaaaaccgctataagctcttgaaaataagttataagctcgtataaaaa 31062936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 143 - 363
Target Start/End: Complemental strand, 42139610 - 42139387
Alignment:
Q  143 ctgatagtagataagctagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaaagatgaaatgacaaaaaa-tg-tgcattt 240  Q
    |||||||  ||||| ||||||  || |||||||| |||||||||||||||||  ||||| |||||||||||  ||||||||| | |||| || | |||||    
T  42139610 ctgatagcggataatctagcttgttcaatttgtagtgtttggtaaaattagcagttgaactagcttataaat-atgaaatgatataaaagtgctacattt 42139512  T
Q  241 aattaatannnnnnnct---aatcaagattgtagggataaaattgagataaaaagtgctaagctataggctacttgaattagcttatcaaaaaccgctat 337  Q
    ||||||||        |   ||| ||||||  |||| ||||||||||||||| | || |||||||||  ||||||||||||||||  ||||| |||||||    
T  42139511 aattaatatttaattttttcaattaagattagaggggtaaaattgagataaataatgataagctataatctacttgaattagcttgacaaaa-ccgctat 42139413  T
Q  338 aagctcatgaaaataagctataagct 363  Q
    ||||| || |||||||||||||||||    
T  42139412 aagctaataaaaataagctataagct 42139387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 307 - 364
Target Start/End: Original strand, 12238594 - 12238651
Alignment:
Q  307 ctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctc 364  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||    
T  12238594 ctacttgaattagcttatcgaaaaccgctataaactcatgaaaataagccataagctc 12238651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 275 - 363
Target Start/End: Complemental strand, 44810149 - 44810061
Alignment:
Q  275 taaaattgagataaaaagtgctaagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagct 363  Q
    ||||||||||||||||| || |||  |||| ||||||||||||||||||| ||||| ||||| |||||  | |||||||||||||||||    
T  44810149 taaaattgagataaaaaatggtaacatataagctacttgaattagcttattaaaaaacgctaaaagctagtaaaaataagctataagct 44810061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 296 - 367
Target Start/End: Complemental strand, 27679142 - 27679071
Alignment:
Q  296 taagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctcgtg 367  Q
    ||||| ||| ||||||||||||||||||| ||||| |||||||||||  | |||||||||||||||||||||    
T  27679142 taagccataagctacttgaattagcttattaaaaaacgctataagctagtaaaaataagctataagctcgtg 27679071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 143 - 192
Target Start/End: Complemental strand, 15804557 - 15804508
Alignment:
Q  143 ctgatagtagataagctagctgattgaatttgtaatgtttggtaaaatta 192  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  15804557 ctgatagtggataaactagctgattgaatttgtaatgtttggtaaaatta 15804508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 159 - 231
Target Start/End: Complemental strand, 27863939 - 27863868
Alignment:
Q  159 tagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaaagatgaaatgacaaaaaa 231  Q
    |||||||||||||||||| |||||| |||||||| || |||| |||||||||||| | |||||||||||||||    
T  27863939 tagctgattgaatttgtagtgtttgataaaattaccggttgaggtagcttataaatg-tgaaatgacaaaaaa 27863868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 275 - 330
Target Start/End: Complemental strand, 15804495 - 15804440
Alignment:
Q  275 taaaattgagataaaaagtgctaagctataggctacttgaattagcttatcaaaaa 330  Q
    ||||||||||||||| | || ||||||||| |||||||||||||||||||||||||    
T  15804495 taaaattgagataaataatgataagctataagctacttgaattagcttatcaaaaa 15804440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 296 - 418
Target Start/End: Original strand, 44809871 - 44809992
Alignment:
Q  296 taagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctcgtgtaaaaatgacagttgcgaaacggatctt 395  Q
    ||||| ||| ||||||||||||||||||||| ||||||||||||||| |  ||||| |||||||||||| || |||| ||||  || | |||| |  |||    
T  44809871 taagccataagctacttgaattagcttatcacaaaccgctataagctta-caaaattagctataagctcatgaaaaagtgaccattaccaaaccggcctt 44809969  T
Q  396 ttttaatcatacgagcttataag 418  Q
    ||||| ||| | |||||||||||    
T  44809970 ttttagtcaaatgagcttataag 44809992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 121 - 248
Target Start/End: Complemental strand, 31063206 - 31063077
Alignment:
Q  121 tgacttataaagtagcttatttctgatagtagataagctagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaaagatgaa 220  Q
    ||||||||||| ||| ||||  |||||||  ||||| ||| | ||||||||||||| |||||| ||| ||||||| ||||||||  |||| ||| |||||    
T  31063206 tgacttataaactagtttatagctgatagcggataaactaacagattgaatttgtagtgtttgataagattagcggttgaagtaatttat-aaatatgaa 31063108  T
Q  221 atgac---aaaaaatgtgcatttaattaata 248  Q
    |||||   | ||||||| |||||||||||||    
T  31063107 atgacataagaaaatgtacatttaattaata 31063077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 258 - 329
Target Start/End: Complemental strand, 42034523 - 42034452
Alignment:
Q  258 aatcaagattgtagggataaaattgagataaaaagtgctaagctataggctacttgaattagcttatcaaaa 329  Q
    |||||| |||||| || ||||||||||||||  | || |||||||||  |||||||||||||||||||||||    
T  42034523 aatcaaaattgtaagggtaaaattgagataagtaatgataagctataatctacttgaattagcttatcaaaa 42034452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 146 - 212
Target Start/End: Original strand, 30804361 - 30804427
Alignment:
Q  146 atagtagataagctagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataa 212  Q
    |||| |||||||||| || |||||||||||| ||||| |||||||||||| ||||| ||| ||||||    
T  30804361 atagcagataagctaactaattgaatttgtagtgtttcgtaaaattagcggttgaactagattataa 30804427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 306 - 350
Target Start/End: Original strand, 1875995 - 1876039
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    |||||||||| |||||| ||||||| |||||||||||||||||||    
T  1875995 gctacttgaaatagcttttcaaaaaacgctataagctcatgaaaa 1876039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 306 - 350
Target Start/End: Complemental strand, 7454669 - 7454625
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    |||||||||| |||||| ||||||| |||||||||||||||||||    
T  7454669 gctacttgaaatagcttttcaaaaaacgctataagctcatgaaaa 7454625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 306 - 350
Target Start/End: Complemental strand, 8875810 - 8875766
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    |||||||||| |||||| ||||||| |||||||||||||||||||    
T  8875810 gctacttgaaatagcttttcaaaaaacgctataagctcatgaaaa 8875766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 306 - 350
Target Start/End: Original strand, 12160876 - 12160920
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    |||||||||| |||||| ||||||| |||||||||||||||||||    
T  12160876 gctacttgaaatagcttttcaaaaaacgctataagctcatgaaaa 12160920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 306 - 350
Target Start/End: Complemental strand, 14958257 - 14958213
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    |||||||||| |||||| ||||||| |||||||||||||||||||    
T  14958257 gctacttgaaatagcttttcaaaaaacgctataagctcatgaaaa 14958213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 306 - 350
Target Start/End: Complemental strand, 34245383 - 34245339
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    |||||||||| |||||| ||||||| |||||||||||||||||||    
T  34245383 gctacttgaaatagcttttcaaaaaacgctataagctcatgaaaa 34245339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 306 - 350
Target Start/End: Complemental strand, 38324375 - 38324331
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    |||||||||| |||||| ||||||| |||||||||||||||||||    
T  38324375 gctacttgaaatagcttttcaaaaaacgctataagctcatgaaaa 38324331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 300 - 367
Target Start/End: Complemental strand, 35189369 - 35189302
Alignment:
Q  300 ctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctcgtg 367  Q
    ||||| |||||| |||||||||||||||||| || ||||||||  | |||| ||||| ||||||||||    
T  35189369 ctataagctactcgaattagcttatcaaaaatcgttataagctagtaaaaacaagctttaagctcgtg 35189302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 307 - 350
Target Start/End: Complemental strand, 42519850 - 42519807
Alignment:
Q  307 ctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    ||||||||| |||||| ||||||| |||||||||||||||||||    
T  42519850 ctacttgaaatagcttttcaaaaaacgctataagctcatgaaaa 42519807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 152 - 210
Target Start/End: Original strand, 2346854 - 2346912
Alignment:
Q  152 gataagctagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttat 210  Q
    |||||| || ||||||| ||||||||||||||||||||||| || ||||| ||| ||||    
T  2346854 gataagttaactgattggatttgtaatgtttggtaaaattaacggttgaactagtttat 2346912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 145 - 231
Target Start/End: Complemental strand, 8752691 - 8752607
Alignment:
Q  145 gatagtagataagctagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaaagatgaaatgacaaaaaa 231  Q
    |||||| ||||||||| || |||||||||||| | |||||||||||  || |||||| |||||||| ||| ||||||||||| ||||    
T  8752691 gatagttgataagctaactaattgaatttgtagt-tttggtaaaatctgcatttgaattagcttat-aaatatgaaatgacataaaa 8752607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 5946454 - 5946409
Alignment:
Q  143 ctgatagtagataagctagctgattgaatttgtaatgtttggtaaa 188  Q
    |||||||  |||||| ||||||||||||||| ||||||||||||||    
T  5946454 ctgatagcggataaggtagctgattgaatttataatgtttggtaaa 5946409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 343
Target Start/End: Complemental strand, 10911666 - 10911593
Alignment:
Q  270 agggataaaattgagataaaaagtgctaagctataggctacttgaattagcttatcaaaaaccgctataagctc 343  Q
    |||| ||||||||||| ||||| || |||| |||| |||| |||| ||||||||||||||   |||||||||||    
T  10911666 aggggtaaaattgagagaaaaaatgttaagttataagctaattgatttagcttatcaaaataagctataagctc 10911593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 226
Target Start/End: Complemental strand, 15968023 - 15967967
Alignment:
Q  169 aatttgtaatgtttggtaaaattagcgtttgaagtagcttataaaagatgaaatgaca 226  Q
    |||||||| || ||||||||||||||| ||||| |||||||| ||| |||||||||||    
T  15968023 aatttgtagtgcttggtaaaattagcggttgaactagcttat-aaatatgaaatgaca 15967967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 33625761 - 33625708
Alignment:
Q  155 aagctagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagctt 208  Q
    |||||||||| ||||||||||| ||||||||| ||||||||  |||| ||||||    
T  33625761 aagctagctggttgaatttgtagtgtttggtataattagcgactgaattagctt 33625708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 309 - 398
Target Start/End: Original strand, 38808956 - 38809045
Alignment:
Q  309 acttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctcgtgtaaaaatgacagttgcgaaacggatcttttt 398  Q
    ||||| |||||||||||| ||| |||||||||||  | ||| ||||||||||||| |||  ||| |||||||| | |||| | |||||||    
T  38808956 acttggattagcttatcataaaacgctataagctagtaaaattaagctataagcttgtgagaaagtgacagttaccaaacaggtcttttt 38809045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 151 - 191
Target Start/End: Complemental strand, 4549071 - 4549031
Alignment:
Q  151 agataagctagctgattgaatttgtaatgtttggtaaaatt 191  Q
    |||||||||| || |||||||||||| ||||||||||||||    
T  4549071 agataagctaactcattgaatttgtattgtttggtaaaatt 4549031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 231
Target Start/End: Complemental strand, 5505780 - 5505703
Alignment:
Q  152 gataagctagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaaagatgaaatgacaaaaaa 231  Q
    ||||||| || ||||| |||||||| ||||| ||||| || ||| ||||| |||||||  ||| ||||||||||||||||    
T  5505780 gataagccagttgattaaatttgtactgtttagtaaacttggcggttgaattagctta--aaatatgaaatgacaaaaaa 5505703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 306 - 350
Target Start/End: Complemental strand, 5774230 - 5774186
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    |||||||||| |||||| |||||||  ||||||||||||||||||    
T  5774230 gctacttgaaatagcttttcaaaaaatgctataagctcatgaaaa 5774186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 306 - 350
Target Start/End: Original strand, 16496578 - 16496622
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    ||||| |||| |||||| ||||||| |||||||||||||||||||    
T  16496578 gctacctgaaatagcttttcaaaaaacgctataagctcatgaaaa 16496622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 159 - 231
Target Start/End: Complemental strand, 27679299 - 27679229
Alignment:
Q  159 tagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaaagatgaaatgacaaaaaa 231  Q
    ||||||||||| ||| || ||| |||||||||||||| ||||| |||||||| ||| ||||||||||| ||||    
T  27679299 tagctgattga-tttatagtgtctggtaaaattagcggttgaactagcttat-aaatatgaaatgacataaaa 27679229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 306 - 350
Target Start/End: Complemental strand, 30523746 - 30523702
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    |||||||||| || ||| ||||||| |||||||||||||||||||    
T  30523746 gctacttgaaataacttttcaaaaaacgctataagctcatgaaaa 30523702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 144 - 192
Target Start/End: Complemental strand, 35442820 - 35442772
Alignment:
Q  144 tgatagtagataagctagctgattgaatttgtaatgtttggtaaaatta 192  Q
    |||||| ||||||| ||| ||||| ||||||||||||||| ||||||||    
T  35442820 tgatagcagataaggtagttgattaaatttgtaatgtttgataaaatta 35442772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 306 - 350
Target Start/End: Original strand, 36936035 - 36936079
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    |||||||||| |||||| ||||||| |||||||||||||| ||||    
T  36936035 gctacttgaaatagcttttcaaaaaacgctataagctcattaaaa 36936079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 306 - 350
Target Start/End: Original strand, 39241123 - 39241167
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    |||||||||| |||||| |||||||  ||||||||||||||||||    
T  39241123 gctacttgaaatagcttttcaaaaaatgctataagctcatgaaaa 39241167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 306 - 350
Target Start/End: Original strand, 44525949 - 44525993
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    |||||||||| |||||| ||||||| ||||||||||| |||||||    
T  44525949 gctacttgaaatagcttctcaaaaaacgctataagctaatgaaaa 44525993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 212
Target Start/End: Complemental strand, 44810277 - 44810218
Alignment:
Q  152 gataagctagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataa 212  Q
    |||||||||||||||||||||||||   |||||||||| |||||  |||| ||||||||||    
T  44810277 gataagctagctgattgaatttgtagcatttggtaaaactagcg-gtgaactagcttataa 44810218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 80; Significance: 2e-37; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 289 - 424
Target Start/End: Original strand, 28444776 - 28444911
Alignment:
Q  289 aaagtgctaagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctcgtgtaaaaatgacagttgcgaaac 388  Q
    |||||| ||||||||| ||||||| |||||||||||||||| || || ||||||||| |||||||||||||||||| ||||||||||| |||| | ||||    
T  28444776 aaagtgataagctataagctacttaaattagcttatcaaaaccctctctaagctcataaaaataagctataagctcttgtaaaaatgagagttaccaaac 28444875  T
Q  389 ggatcttttttaatcatacgagcttataagctataa 424  Q
     | | |||||||||||||||||||||||||||||||    
T  28444876 aggtattttttaatcatacgagcttataagctataa 28444911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 296 - 424
Target Start/End: Complemental strand, 41470155 - 41470027
Alignment:
Q  296 taagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctcgtgtaaaaatgacagttgcgaaacggatctt 395  Q
    ||||||||| ||||||||| ||||||||| ||||| | |||| ||||  | ||| |||| ||||||||||||  |||||||||||| | |||||| ||||    
T  41470155 taagctataagctacttgagttagcttataaaaaaacactatgagctagtaaaattaagttataagctcgtgagaaaatgacagttaccaaacgggtctt 41470056  T
Q  396 ttttaatcatacgagcttataagctataa 424  Q
    ||||| | ||| |||||||||||||||||    
T  41470055 ttttagttatatgagcttataagctataa 41470027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 152 - 232
Target Start/End: Complemental strand, 43408750 - 43408671
Alignment:
Q  152 gataagctagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaaagatgaaatgacaaaaaat 232  Q
    ||||||||||| ||||||||||||| ||||||||||||||||   ||||| |||||||| ||| |||||||||||||||||    
T  43408750 gataagctagccgattgaatttgtagtgtttggtaaaattagtaattgaactagcttat-aaatatgaaatgacaaaaaat 43408671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 307 - 418
Target Start/End: Original strand, 38288897 - 38289008
Alignment:
Q  307 ctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctcgtgtaaaaatgacagttgcgaaacggatcttttttaatcata 406  Q
    |||||||||||||||||||| |||| | |||||||| || ||||||| |||||||||| || ||||||||  ||| ||||||| || ||||||| ||| |    
T  38288897 ctacttgaattagcttatcacaaacagttataagcttataaaaataatctataagctcatgaaaaaatgattgttacgaaacgaattttttttagtcaaa 38288996  T
Q  407 cgagcttataag 418  Q
      ||||||||||    
T  38288997 taagcttataag 38289008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 272 - 381
Target Start/End: Original strand, 13895934 - 13896050
Alignment:
Q  272 ggataaaattgagataaaaagtgctaa-------gctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctc 364  Q
    ||||||||||||||||||||||| |||       | |||| | ||||||||||| ||||||||||||  |||||| |||||||||||||| |||||||||    
T  13895934 ggataaaattgagataaaaagtgataaattttgagttataagttacttgaattaacttatcaaaaacaactataaactcatgaaaataagttataagctc 13896033  T
Q  365 gtgtaaaaatgacagtt 381  Q
     | ||| ||||||||||    
T  13896034 atttaataatgacagtt 13896050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 120 - 206
Target Start/End: Original strand, 21367048 - 21367133
Alignment:
Q  120 atgacttataaagtagcttatttctgatagtagataagctagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagc 206  Q
    |||||||||||  ||||||||  |||||| | ||||||||| |||||||| |||||| |||||||||||||||||| ||||||||||    
T  21367048 atgacttataatctagcttatagctgataatggataagctaactgattga-tttgtagtgtttggtaaaattagcgattgaagtagc 21367133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 152 - 232
Target Start/End: Complemental strand, 2111091 - 2111012
Alignment:
Q  152 gataagctagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaaagatgaaatgacaaaaaat 232  Q
    |||||| || ||||||||||||| | |||||||||||||||||| ||||| |||||||| ||| ||||||||||| |||||    
T  2111091 gataagataactgattgaatttgcagtgtttggtaaaattagcggttgaactagcttat-aaatatgaaatgacataaaat 2111012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 296 - 400
Target Start/End: Original strand, 18892296 - 18892400
Alignment:
Q  296 taagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctcgtgtaaaaatgacagttgcgaaacggatctt 395  Q
    |||| |||| ||||||||||||||||||||| ||| |||||||||||  | || ||||| |  |||||||||| |||||||| ||| |||||| | ||||    
T  18892296 taagatataagctacttgaattagcttatcagaaagcgctataagctagtaaatataagttggaagctcgtgtgaaaatgacggttacgaaacaggtctt 18892395  T
Q  396 tttta 400  Q
    |||||    
T  18892396 tttta 18892400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 283 - 407
Target Start/End: Original strand, 25019620 - 25019744
Alignment:
Q  283 agataaaaagtgctaagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctcgtgtaaaaatgacagttg 382  Q
    |||||||||||   |||||||| |||||||||||||| |||||| || |   ||||||||||| |||| ||| ||||| ||||| ||||||| ||||||     
T  25019620 agataaaaagttacaagctataagctacttgaattagattatcataagctcatataagctcataaaaagaagttataatctcgtttaaaaataacagtta 25019719  T
Q  383 cgaaacggatcttttttaatcatac 407  Q
    | ||||  || ||||||||||||||    
T  25019720 ccaaacaaatattttttaatcatac 25019744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 296 - 347
Target Start/End: Complemental strand, 37740675 - 37740624
Alignment:
Q  296 taagctataggctacttgaattagcttatcaaaaaccgctataagctcatga 347  Q
    ||||||||| |||||||| |||||| ||||||||||||||||||||||||||    
T  37740675 taagctataagctacttggattagcatatcaaaaaccgctataagctcatga 37740624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 12524602 - 12524656
Alignment:
Q  159 tagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaa 213  Q
    |||||||||||||||||| |||||||||||||||||  |||||||| ||||||||    
T  12524602 tagctgattgaatttgtagtgtttggtaaaattagccgttgaagtaacttataaa 12524656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 296 - 422
Target Start/End: Complemental strand, 14243236 - 14243110
Alignment:
Q  296 taagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctcgtgtaaaaatgacagttgcgaaacggatctt 395  Q
    |||||||||  ||| || |||||||||||||||||||| |||||| |||| |||||||| ||| || | ||| |||||| ||| || |  ||  | ||||    
T  14243236 taagctataaactatttcaattagcttatcaaaaaccgatataagttcataaaaataagttattagtttgtgaaaaaataacaattactgaataggtctt 14243137  T
Q  396 ttttaatcatacgagcttataagctat 422  Q
    ||||| |||||| ||||||||||||||    
T  14243136 ttttagtcatacaagcttataagctat 14243110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 146 - 231
Target Start/End: Complemental strand, 35764807 - 35764723
Alignment:
Q  146 atagtagataagctagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaaagatgaaatgacaaaaaa 231  Q
    ||||| ||||| |||| |||||||||||| | |||||||||||||||||| ||||| ||| |||| ||| ||||||||||| ||||    
T  35764807 atagttgataatctagttgattgaatttgcagtgtttggtaaaattagcggttgaactagtttat-aaatatgaaatgacataaaa 35764723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 310 - 374
Target Start/End: Original strand, 13544129 - 13544193
Alignment:
Q  310 cttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctcgtgtaaaaat 374  Q
    ||||||||||||||||| ||||  |||||| |||||  ||||||||||||| |||||||||||||    
T  13544129 cttgaattagcttatcacaaactactataaactcatacaaataagctataaactcgtgtaaaaat 13544193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 310 - 374
Target Start/End: Complemental strand, 13680344 - 13680280
Alignment:
Q  310 cttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctcgtgtaaaaat 374  Q
    ||||||||||||||||| ||||  |||||| |||||  ||||||||||||| |||||||||||||    
T  13680344 cttgaattagcttatcacaaactactataaactcatacaaataagctataaactcgtgtaaaaat 13680280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 296 - 364
Target Start/End: Original strand, 32467773 - 32467840
Alignment:
Q  296 taagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctc 364  Q
    ||||||||| |||||||||||| |||||||||||||  |||||||||  | ||||||||||||||||||    
T  32467773 taagctataagctacttgaatt-gcttatcaaaaacgactataagctagtaaaaataagctataagctc 32467840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 296 - 424
Target Start/End: Complemental strand, 43408615 - 43408488
Alignment:
Q  296 taagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctcgtgtaaaaatgacagttgcgaaacggatctt 395  Q
    ||||||||| |||||||||||||||||||||||||  ||||| | ||  |||||||||| ||||||||| ||  |||||||  ||| | |||||  ||||    
T  43408615 taagctatatgctacttgaattagcttatcaaaaa-tgctattatctagtgaaaataagttataagctcatgagaaaatgatggttaccaaacgactctt 43408517  T
Q  396 ttttaatcatacgagcttataagctataa 424  Q
    ||||| || || || || |||||||||||    
T  43408516 ttttagtcgtatgaactaataagctataa 43408488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 152 - 231
Target Start/End: Original strand, 28947309 - 28947387
Alignment:
Q  152 gataagctagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaaagatgaaatgacaaaaaa 231  Q
    ||||||||||||||||||||||| | ||||| |||||||| | | ||||| |||||||| ||| ||||||||||| ||||    
T  28947309 gataagctagctgattgaatttgcagtgtttagtaaaatttgtggttgaactagcttat-aaatatgaaatgacataaaa 28947387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 152 - 213
Target Start/End: Complemental strand, 926058 - 925997
Alignment:
Q  152 gataagctagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaa 213  Q
    ||||||||||||||||||||||||  ||||||||||||| || | |||||  ||||||||||    
T  926058 gataagctagctgattgaatttgttgtgtttggtaaaatgagtggttgaaccagcttataaa 925997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 275 - 364
Target Start/End: Original strand, 3346223 - 3346312
Alignment:
Q  275 taaaattgagataaaaagtgctaagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctc 364  Q
    |||||||||||||||||||| ||||||| |  | | ||||||||||||||| ||||   ||| |||||||| ||| |||| |||||||||    
T  3346223 taaaattgagataaaaagtgataagctacaaacaatttgaattagcttatcgaaaaatactacaagctcataaaactaagttataagctc 3346312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 257 - 302
Target Start/End: Original strand, 12525138 - 12525183
Alignment:
Q  257 taatcaagattgtagggataaaattgagataaaaagtgctaagcta 302  Q
    |||| |||||||||||| |||||||||||||||||||| |||||||    
T  12525138 taattaagattgtaggggtaaaattgagataaaaagtgataagcta 12525183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 306 - 350
Target Start/End: Complemental strand, 14911902 - 14911858
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    |||||||||| |||||| ||||||| |||||||||||||||||||    
T  14911902 gctacttgaaatagcttttcaaaaaacgctataagctcatgaaaa 14911858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 306 - 350
Target Start/End: Original strand, 25100177 - 25100221
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    |||||||||| |||||| ||||||| |||||||||||||||||||    
T  25100177 gctacttgaaatagcttttcaaaaaacgctataagctcatgaaaa 25100221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 306 - 350
Target Start/End: Complemental strand, 25100383 - 25100339
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    |||||||||| |||||| ||||||| |||||||||||||||||||    
T  25100383 gctacttgaaatagcttttcaaaaaacgctataagctcatgaaaa 25100339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 307 - 347
Target Start/End: Original strand, 35057264 - 35057304
Alignment:
Q  307 ctacttgaattagcttatcaaaaaccgctataagctcatga 347  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  35057264 ctacttgaattagcttttcaaaaatcgctataagctcatga 35057304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 306 - 350
Target Start/End: Complemental strand, 36859365 - 36859321
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    |||||||||| |||||| ||||||| |||||||||||||||||||    
T  36859365 gctacttgaaatagcttttcaaaaaacgctataagctcatgaaaa 36859321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 213
Target Start/End: Complemental strand, 37740823 - 37740763
Alignment:
Q  153 ataagctagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaa 213  Q
    |||||||||||||||||||||||| |||||| || |||||||  ||||| |||||| ||||    
T  37740823 ataagctagctgattgaatttgtagtgtttgatacaattagctgttgaactagcttttaaa 37740763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 306 - 350
Target Start/End: Complemental strand, 40529638 - 40529594
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    |||||||||| |||||| ||||||| |||||||||||||||||||    
T  40529638 gctacttgaaatagcttttcaaaaaacgctataagctcatgaaaa 40529594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 306 - 350
Target Start/End: Original strand, 43800731 - 43800775
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    |||||||||| |||||| ||||||| |||||||||||||||||||    
T  43800731 gctacttgaaatagcttttcaaaaaacgctataagctcatgaaaa 43800775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 296 - 363
Target Start/End: Original strand, 24523835 - 24523902
Alignment:
Q  296 taagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagct 363  Q
    ||||||||| ||||||||||| ||| ||||||||||| || ||||||  | |||||||| ||||||||    
T  24523835 taagctataagctacttgaatcagcatatcaaaaacctctctaagctagtaaaaataagttataagct 24523902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 296 - 367
Target Start/End: Original strand, 27316672 - 27316743
Alignment:
Q  296 taagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctcgtg 367  Q
    |||||||||  |||||||||||| |||| ||||||  |||||||||| || |||||||| ||||| ||||||    
T  27316672 taagctataaactacttgaattaacttaccaaaaaatgctataagctaataaaaataagatataaactcgtg 27316743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 152 - 207
Target Start/End: Original strand, 28444672 - 28444727
Alignment:
Q  152 gataagctagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagct 207  Q
    |||||||||| || ||||||||||||| ||||| |||||||||  |||||||||||    
T  28444672 gataagctagttgtttgaatttgtaatatttgggaaaattagcagttgaagtagct 28444727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 192
Target Start/End: Complemental strand, 29861558 - 29861519
Alignment:
Q  153 ataagctagctgattgaatttgtaatgtttggtaaaatta 192  Q
    ||||||||| |||||||||||||| |||||||||||||||    
T  29861558 ataagctagttgattgaatttgtagtgtttggtaaaatta 29861519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 300 - 342
Target Start/End: Complemental strand, 2595273 - 2595231
Alignment:
Q  300 ctataggctacttgaattagcttatcaaaaaccgctataagct 342  Q
    ||||| ||||||||||||||||||||||||| | |||||||||    
T  2595273 ctatatgctacttgaattagcttatcaaaaaacactataagct 2595231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 306 - 424
Target Start/End: Original strand, 14354543 - 14354661
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctcgtgtaaaaatgacagttgcgaaacggatcttttttaatcat 405  Q
    ||||||||| || |||||| ||||| |||||||||||  | ||||||| |||| ||||||    |||| ||| ||| | ||| || ||||||||| ||||    
T  14354543 gctacttgagttggcttataaaaaaacgctataagctagtaaaaataaactattagctcgacagaaaacgactgttaccaaatgggtcttttttagtcat 14354642  T
Q  406 acgagcttataagctataa 424  Q
    | |||||||||| ||||||    
T  14354643 atgagcttataaactataa 14354661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 296 - 342
Target Start/End: Complemental strand, 29512852 - 29512807
Alignment:
Q  296 taagctataggctacttgaattagcttatcaaaaaccgctataagct 342  Q
    |||||||||  |||||||||||||||||| |||||||||||||||||    
T  29512852 taagctataatctacttgaattagcttat-aaaaaccgctataagct 29512807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 178 - 231
Target Start/End: Complemental strand, 8407637 - 8407585
Alignment:
Q  178 tgtttggtaaaattagcgtttgaagtagcttataaaagatgaaatgacaaaaaa 231  Q
    |||||||||||||||||| ||||| |||||||| ||| ||||||||||| ||||    
T  8407637 tgtttggtaaaattagcggttgaactagcttat-aaatatgaaatgacataaaa 8407585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 168 - 213
Target Start/End: Original strand, 13544014 - 13544059
Alignment:
Q  168 gaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaa 213  Q
    ||||||||||||||| |||||||||||| ||||||| | |||||||    
T  13544014 gaatttgtaatgtttagtaaaattagcggttgaagttgtttataaa 13544059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 168 - 213
Target Start/End: Complemental strand, 13680459 - 13680414
Alignment:
Q  168 gaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaa 213  Q
    ||||||||||||||| |||||||||||| ||||||| | |||||||    
T  13680459 gaatttgtaatgtttagtaaaattagcggttgaagttgtttataaa 13680414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 424
Target Start/End: Complemental strand, 13970072 - 13969985
Alignment:
Q  335 tataagctcatgaaaataagctataagctcgtgtaaaaatgacagttgcgaaacggatcttttttaatcatacgagcttataagctataa 424  Q
    ||||||||| ||||| |||||||||||||||||   ||| ||||||  | |||| || ||||||| |||| |||||||||||||||||||    
T  13970072 tataagctcgtgaaa-taagctataagctcgtggtgaaaagacagtacc-aaacagagcttttttgatcaaacgagcttataagctataa 13969985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 213
Target Start/End: Original strand, 33583892 - 33583953
Alignment:
Q  152 gataagctagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaa 213  Q
    |||||||||| ||||||||||||||  |||||||||||||| |   |||| |||||||||||    
T  33583892 gataagctagttgattgaatttgtagcgtttggtaaaattaacagctgaactagcttataaa 33583953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 364
Target Start/End: Complemental strand, 35764650 - 35764593
Alignment:
Q  307 ctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctc 364  Q
    |||||||||||||||||| ||||| || || |||||  | ||||||||||||||||||    
T  35764650 ctacttgaattagcttataaaaaaacgttacaagcttgtaaaaataagctataagctc 35764593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 153 - 213
Target Start/End: Original strand, 3346102 - 3346162
Alignment:
Q  153 ataagctagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaa 213  Q
    ||||||||| |||||||||||||||||| || |||||||| || ||| | || ||||||||    
T  3346102 ataagctagttgattgaatttgtaatgtatgataaaattaacggttggaataacttataaa 3346162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 306 - 350
Target Start/End: Original strand, 20697468 - 20697512
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    |||||||||| |||||| ||||||| || ||||||||||||||||    
T  20697468 gctacttgaaatagcttttcaaaaaacgttataagctcatgaaaa 20697512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 275 - 359
Target Start/End: Complemental strand, 29861430 - 29861347
Alignment:
Q  275 taaaattgagataaaaagtgctaagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctata 359  Q
    ||||||||||| ||||| || ||||||||| |||| || ||||||||||||||||  |||||| | ||  | |||||||||||||    
T  29861430 taaaattgagagaaaaa-tgataagctataagctaattcaattagcttatcaaaatacgctatgaactagtaaaaataagctata 29861347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 275 - 343
Target Start/End: Original strand, 36049660 - 36049728
Alignment:
Q  275 taaaattgagataaaaagtgctaagctataggctacttgaattagcttatcaaaaaccgctataagctc 343  Q
    ||||||||||||||| | || ||| ||||| | ||||| ||||||||||| ||||| || |||||||||    
T  36049660 taaaattgagataaataatgataaactataagttacttaaattagcttataaaaaaacgttataagctc 36049728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 306 - 350
Target Start/End: Original strand, 45237755 - 45237799
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    |||||||||| |||||| ||||||| ||||||||||| |||||||    
T  45237755 gctacttgaaatagcttttcaaaaaacgctataagctaatgaaaa 45237799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 79; Significance: 1e-36; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 262 - 400
Target Start/End: Original strand, 49873 - 50011
Alignment:
Q  262 aagattgtagggataaaattgagataaaaagtgctaagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataag 361  Q
    ||||||| | || |||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||| | |||||||||||||||    
T  49873 aagattgcaagggtaaaattgagataaaaagtgataagctataagctacttgaattagcttatcacaaaccgctataagctcttaaaaataagctataag 49972  T
Q  362 ctcgtgtaaaaatgacagttgcgaaacggatctttttta 400  Q
    ||||||  ||| |||| ||| | |||||| |||||||||    
T  49973 ctcgtgagaaagtgaccgttaccaaacgggtctttttta 50011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 9e-31; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 180 - 429
Target Start/End: Complemental strand, 883930 - 883677
Alignment:
Q  180 tttggtaaaattagcgtttgaagtagcttataaaagatgaaatgaca--aaaaatgtgcatttaattaatannnnnnnct---aatcaagattgtaggga 274  Q
    |||| |||||||| || |||||||||||||||||  |||||||||||  ||||||||||||||||||| ||        |   ||| | ||||| ||||     
T  883930 tttgataaaattaacggttgaagtagcttataaat-atgaaatgacataaaaaatgtgcatttaattagtatttatttttttcaattaggattgcagggg 883832  T
Q  275 taaaattgagataaaaagtgctaagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctcgtgtaaaaat 374  Q
    |||||| ||||||||||||| ||| |||||  |||||||||||| ||||||| ||||  ||||| ||||||||||||||| |||||||||||||||||||    
T  883831 taaaatggagataaaaagtgataaactataaactacttgaattaacttatcagaaacttctatatgctcatgaaaataagttataagctcgtgtaaaaat 883732  T
Q  375 gacagttgcgaaacggatcttttttaatcatacgagcttataagctataaaccat 429  Q
    | |||||   ||| |  |||| || |||||||| |||||||| ||||||| ||||    
T  883731 gtcagttatcaaatgagtcttgttcaatcatacaagcttatatgctataagccat 883677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 180 - 429
Target Start/End: Complemental strand, 1243259 - 1243006
Alignment:
Q  180 tttggtaaaattagcgtttgaagtagcttataaaagatgaaatgaca--aaaaatgtgcatttaattaatannnnnnnct---aatcaagattgtaggga 274  Q
    |||| |||||||| || |||||||||||||||||  |||||||||||  ||||||||||||||||||| ||        |   ||| | ||||| ||||     
T  1243259 tttgataaaattaacggttgaagtagcttataaat-atgaaatgacataaaaaatgtgcatttaattagtatttatttttttcaattaggattgcagggg 1243161  T
Q  275 taaaattgagataaaaagtgctaagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctcgtgtaaaaat 374  Q
    |||||| ||||||||||||| ||| |||||  |||||||||||| ||||||| ||||  ||||| ||||||||||||||| |||||||||||||||||||    
T  1243160 taaaatggagataaaaagtgataaactataaactacttgaattaacttatcagaaacttctatatgctcatgaaaataagttataagctcgtgtaaaaat 1243061  T
Q  375 gacagttgcgaaacggatcttttttaatcatacgagcttataagctataaaccat 429  Q
    | |||||   ||| |  |||| || |||||||| |||||||| ||||||| ||||    
T  1243060 gtcagttatcaaatgagtcttgttcaatcatacaagcttatatgctataagccat 1243006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 263 - 424
Target Start/End: Complemental strand, 3837046 - 3836882
Alignment:
Q  263 agattgtagggataaaattgagataaaaagtgctaagctatag----gctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctat 358  Q
    |||||| |||| ||||||||||||||||||   |||||||||     ||||||||||||||||||  ||||| |||||||||  |||||| |||||||||    
T  3837046 agattgcaggggtaaaattgagataaaaagctataagctataattaagctacttgaattagcttaggaaaaaacgctataagaacatgaacataagctat 3836947  T
Q  359 aagctcgtgtaaaaatgacagttgcgaaacggatcttttttaatcatacgagcttataagctataa 424  Q
    |||||||||   |||||||| || | | | || ||||||| | ||||| |||||||||||||||||    
T  3836946 aagctcgtgatgaaatgaca-ttactatatgggtctttttaagtcataggagcttataagctataa 3836882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 300 - 388
Target Start/End: Complemental strand, 25659508 - 25659420
Alignment:
Q  300 ctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctcgtgtaaaaatgacagttgcgaaac 388  Q
    ||||| |||||||||||||||||||| ||||||  | ||||||||||||||||||||||||| | || ||||||||| |||||| ||||    
T  25659508 ctataagctacttgaattagcttatcgaaaaccattgtaagctcatgaaaataagctataagtttgtctaaaaatgaaagttgccaaac 25659420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 109 - 413
Target Start/End: Original strand, 28175391 - 28175708
Alignment:
Q  109 gcttatagctcatgacttataaagtagcttatttctgatagtagataagctagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagctt 208  Q
    |||||||||  |||||||||||  ||||||||  |||||||  ||| |||||| ||  |||||||||| |||||| || |||||||| ||||||||||||    
T  28175391 gcttatagcggatgacttataagctagcttatagctgatagcggatcagctagttggctgaatttgtagtgtttgatataattagcggttgaagtagctt 28175490  T
Q  209 ataaaagatgaaatgaca---aaaaatgtgcatttaattaatannnnnnnctaatcaa----gattgtagggataaaattgagataaaaagt-------g 294  Q
    | |||  |||||||||||   ||||||||  |||||||| |||        |  ||||    |||||||||| ||||||| |||||||||||       |    
T  28175491 acaaat-atgaaatgacataaaaaaatgtatatttaattgatatttttattttttcaacaaagattgtaggggtaaaattcagataaaaagtaaaaagtg 28175589  T
Q  295 ctaagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctcgtgtaaaaatgacagttgcgaaacggatct 394  Q
     ||||||||| ||||||||| ||||||||||||| |  ||||||||||||| |||||||||||||| ||| |   |||||||||||  | ||| || |||    
T  28175590 ataagctataagctacttgagttagcttatcaaagaaagctataagctcataaaaataagctataaactcattagaaaatgacagtaaccaaatgggtct 28175689  T
Q  395 tttttaatcatacgagctt 413  Q
    ||| |  ||||||||||||    
T  28175690 tttgtcgtcatacgagctt 28175708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 308 - 418
Target Start/End: Original strand, 18654709 - 18654819
Alignment:
Q  308 tacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctcgtgtaaaaatgacagttgcgaaacggatcttttttaatcatac 407  Q
    ||||||||||||||||||| ||||  |||||||||||| ||||||| |||||| ||| ||  |||||||| |||   ||| | |||||||||||||| |     
T  18654709 tacttgaattagcttatcacaaacaactataagctcataaaaataatctataaactcatgagaaaatgaccgttatcaaaggaatcttttttaatcaaat 18654808  T
Q  408 gagcttataag 418  Q
    |||||||||||    
T  18654809 gagcttataag 18654819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 152 - 213
Target Start/End: Complemental strand, 2525365 - 2525304
Alignment:
Q  152 gataagctagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaa 213  Q
    ||||||||||||||||||||||||| |||||||||||||||||   |||| |||||||||||    
T  2525365 gataagctagctgattgaatttgtattgtttggtaaaattagcagctgaactagcttataaa 2525304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 308 - 364
Target Start/End: Original strand, 44235513 - 44235569
Alignment:
Q  308 tacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctc 364  Q
    ||||||||||| ||||||||||| | |||||||||||| ||||||||||||||||||    
T  44235513 tacttgaattaacttatcaaaaaacactataagctcattaaaataagctataagctc 44235569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 307 - 418
Target Start/End: Complemental strand, 18654206 - 18654096
Alignment:
Q  307 ctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctcgtgtaaaaatgacagttgcgaaacggatcttttttaatcata 406  Q
    |||||||||||||||||||| |||| |||||||||| || ||||||| |||||| ||| || ||||||||| ||| |  |||| |||||||||| ||| |    
T  18654206 ctacttgaattagcttatcagaaacagctataagcttataaaaataatctataaactcatgaaaaaatgactgttac-caacgaatcttttttagtcaaa 18654108  T
Q  407 cgagcttataag 418  Q
      ||||||||||    
T  18654107 taagcttataag 18654096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 144 - 213
Target Start/End: Original strand, 44235297 - 44235366
Alignment:
Q  144 tgatagtagataagctagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaa 213  Q
    |||||| ||||||| ||||||||| |||||||| ||||||||||| ||| |  |||||||||||||||||    
T  44235297 tgatagcagataagttagctgatttaatttgtagtgtttggtaaagttaaccgttgaagtagcttataaa 44235366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 7379653 - 7379568
Alignment:
Q  127 ataaagtagcttatttctgatagtagataagctagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaa 213  Q
    ||||| ||||||||   ||||||| |||||| ||||||||||| |||| ||||||||||||||||| || ||||| || ||||||||    
T  7379653 ataaactagcttatagatgatagtggataagttagctgattgagtttgcaatgtttggtaaaatta-cgattgaattaacttataaa 7379568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 163 - 244
Target Start/End: Complemental strand, 30046523 - 30046441
Alignment:
Q  163 tgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaaagatgaaatgacaaaaaa-tgtgcatttaatt 244  Q
    ||||| ||||| || |||||||||||||||| | ||||||| | |||||||| || |||||| |||||| |||||||||||||    
T  30046523 tgattaaatttatattgtttggtaaaattagagattgaagttgtttataaaaaattaaatgataaaaaattgtgcatttaatt 30046441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 308 - 350
Target Start/End: Complemental strand, 44818856 - 44818814
Alignment:
Q  308 tacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    ||||||||||||||||||||||| ||||||||||| |||||||    
T  44818856 tacttgaattagcttatcaaaaaacgctataagctaatgaaaa 44818814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 144 - 185
Target Start/End: Complemental strand, 42968005 - 42967964
Alignment:
Q  144 tgatagtagataagctagctgattgaatttgtaatgtttggt 185  Q
    |||||| |||||||||||| ||||||||||||||||||||||    
T  42968005 tgatagcagataagctagccgattgaatttgtaatgtttggt 42967964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 270 - 330
Target Start/End: Original strand, 87266 - 87326
Alignment:
Q  270 agggataaaattgagataaaaagtgctaagctataggctacttgaattagcttatcaaaaa 330  Q
    |||| ||||||||||||||| | || |||||| || |||||||||||||||||||| ||||    
T  87266 aggggtaaaattgagataaatattgttaagctttaagctacttgaattagcttatctaaaa 87326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 275 - 343
Target Start/End: Complemental strand, 2525239 - 2525172
Alignment:
Q  275 taaaattgagataaaaagtgctaagctataggctacttgaattagcttatcaaaaaccgctataagctc 343  Q
    ||||||||||| ||||| || ||| ||||| |||||||  ||||||||||||||||| |||||||||||    
T  2525239 taaaattgagagaaaaaatgataa-ctataagctacttagattagcttatcaaaaactgctataagctc 2525172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 169 - 213
Target Start/End: Complemental strand, 3837143 - 3837099
Alignment:
Q  169 aatttgtaatgtttggtaaaattagcgtttgaagtagcttataaa 213  Q
    |||||||| |||||||||||||||||  |||||||||||||||||    
T  3837143 aatttgtagtgtttggtaaaattagccgttgaagtagcttataaa 3837099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 320 - 424
Target Start/End: Original strand, 12473526 - 12473630
Alignment:
Q  320 cttatcaaaaaccgctataagctcatgaaaataagctataagctcgtgtaaaaatgacagttgcgaaacggatcttttttaatcatacgagcttataagc 419  Q
    ||||| ||||| ||||| |||||  | |||||||||||||||||| ||  ||||| || ||| | |||||| ||||||||| ||| | ||||||||||||    
T  12473526 cttataaaaaaacgctacaagctagtaaaaataagctataagctcatgagaaaattacggttaccaaacgggtcttttttagtcaaatgagcttataagc 12473625  T
Q  420 tataa 424  Q
     ||||    
T  12473626 cataa 12473630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 275 - 367
Target Start/End: Complemental strand, 15050918 - 15050826
Alignment:
Q  275 taaaattgagataaaaagtgctaagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctcgtg 367  Q
    ||||||||| |||||||  | |||||| || |||||||||||||| | |||||||  ||||||||||   | |||||| ||||||||||||||    
T  15050918 taaaattgacataaaaaacgataagctttaagctacttgaattagttcatcaaaagacgctataagcaagtaaaaatatgctataagctcgtg 15050826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 163 - 231
Target Start/End: Original strand, 19683450 - 19683517
Alignment:
Q  163 tgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaaagatgaaatgacaaaaaa 231  Q
    |||||||||||||| |||||| ||||| ||||| |||||||| || || ||| ||||||||||||||||    
T  19683450 tgattgaatttgtagtgtttgataaaaatagcggttgaagtaactaat-aaatatgaaatgacaaaaaa 19683517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 306 - 350
Target Start/End: Complemental strand, 27826846 - 27826802
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    |||||||||| |||||| ||||||| |||||||||||||||||||    
T  27826846 gctacttgaaatagcttttcaaaaaacgctataagctcatgaaaa 27826802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 306 - 350
Target Start/End: Original strand, 29994178 - 29994222
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    |||||||||| |||||| ||||||| |||||||||||||||||||    
T  29994178 gctacttgaaatagcttttcaaaaaacgctataagctcatgaaaa 29994222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 306 - 350
Target Start/End: Original strand, 42328985 - 42329029
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    |||||||||| |||||| ||||||| |||||||||||||||||||    
T  42328985 gctacttgaaatagcttttcaaaaaacgctataagctcatgaaaa 42329029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 285 - 345
Target Start/End: Complemental strand, 42967822 - 42967762
Alignment:
Q  285 ataaaaagtgctaagctataggctacttgaattagcttatcaaaaaccgctataagctcat 345  Q
    ||||| |||| |||||| || |||||||||||||||||||| |||| || |||||||||||    
T  42967822 ataaatagtgataagctttaagctacttgaattagcttatcgaaaaacgttataagctcat 42967762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 306 - 350
Target Start/End: Complemental strand, 46672643 - 46672599
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    |||||||||| |||||| ||||||| |||||||||||||||||||    
T  46672643 gctacttgaaatagcttttcaaaaaacgctataagctcatgaaaa 46672599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 307 - 378
Target Start/End: Original strand, 34838459 - 34838530
Alignment:
Q  307 ctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctcgtgtaaaaatgaca 378  Q
    ||||||||||||  |||||||||||||  |||| || || |||||||| ||||||||  |||||||||||||    
T  34838459 ctacttgaattaatttatcaaaaaccgtcataaacttataaaaataagatataagcttttgtaaaaatgaca 34838530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 152 - 211
Target Start/End: Complemental strand, 37869178 - 37869119
Alignment:
Q  152 gataagctagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttata 211  Q
    ||||| ||| |||||| |||||||| |||||| | ||||| |||||||||||||||||||    
T  37869178 gataatctaactgattaaatttgtactgtttgatgaaattggcgtttgaagtagcttata 37869119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 15051040 - 15050986
Alignment:
Q  156 agctagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttat 210  Q
    ||||||||||||||||||  | |||||||||||||||| | ||||| ||||||||    
T  15051040 agctagctgattgaatttagagtgtttggtaaaattagtggttgaactagcttat 15050986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 213
Target Start/End: Original strand, 43911088 - 43911154
Alignment:
Q  147 tagtagataagctagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaa 213  Q
    |||||||| |||||| |||||||||||||| | ||||||||||| || | ||||| || ||||||||    
T  43911088 tagtagattagctagatgattgaatttgtagtatttggtaaaatcagtggttgaactaacttataaa 43911154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 306 - 347
Target Start/End: Complemental strand, 25696170 - 25696129
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatga 347  Q
    ||||||||||||| ||| ||||||| ||||||||||||||||    
T  25696170 gctacttgaattaacttctcaaaaaacgctataagctcatga 25696129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 366
Target Start/End: Complemental strand, 30046374 - 30046310
Alignment:
Q  301 tataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctcgt 366  Q
    |||| ||||||||||||| ||||||| |||||| ||||| ||||  |||||||| |||||||||||    
T  30046374 tataagctacttgaattaacttatcacaaaccgttataaactca-aaaaataagttataagctcgt 30046310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 213
Target Start/End: Complemental strand, 31740666 - 31740598
Alignment:
Q  144 tgatagtagataagctagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaa 213  Q
    |||||| ||||||| ||||| |||||||||| | ||||||||||||||| || ||||| || ||||||||    
T  31740666 tgatagcagataagttagcttattgaatttgcagtgtttggtaaaatta-cgattgaattaacttataaa 31740598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 306 - 347
Target Start/End: Original strand, 46349846 - 46349887
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatga 347  Q
    |||||||||| |||||| ||||||| ||||||||||||||||    
T  46349846 gctacttgaaatagcttttcaaaaaacgctataagctcatga 46349887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 306 - 346
Target Start/End: Complemental strand, 4060489 - 4060449
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatg 346  Q
    |||||||||| |||||| ||||||| |||||||||||||||    
T  4060489 gctacttgaaatagcttttcaaaaaacgctataagctcatg 4060449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 270 - 338
Target Start/End: Original strand, 13438420 - 13438488
Alignment:
Q  270 agggataaaattgagataaaaagtgctaagctataggctacttgaattagcttatcaaaaaccgctata 338  Q
    |||| |||||||| |||||||  || ||||||||| | ||||||||||| ||||| ||||| |||||||    
T  13438420 aggggtaaaattgtgataaaatatgataagctataagttacttgaattatcttataaaaaaacgctata 13438488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 307 - 367
Target Start/End: Complemental strand, 15568811 - 15568751
Alignment:
Q  307 ctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctcgtg 367  Q
    |||||||||||||||||| ||||| || ||  ||||||| |||||||| |||||| |||||    
T  15568811 ctacttgaattagcttattaaaaagcgatacgagctcataaaaataagttataagttcgtg 15568751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 335 - 379
Target Start/End: Complemental strand, 19087312 - 19087268
Alignment:
Q  335 tataagctcatgaaaataagctataagctcgtgtaaaaatgacag 379  Q
    ||||||||||||||||| |  ||||||||||| ||||||||||||    
T  19087312 tataagctcatgaaaatgaattataagctcgtataaaaatgacag 19087268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 356 - 424
Target Start/End: Complemental strand, 24581039 - 24580971
Alignment:
Q  356 tataagctcgtgtaaaaatgacagttgcgaaacggatcttttttaatcatacgagcttataagctataa 424  Q
    ||||| ||| ||||| ||||||| || | ||||  ||||||||||||||||||||| ||||| ||||||    
T  24581039 tataaactcttgtaagaatgacacttaccaaacatatcttttttaatcatacgagcatataatctataa 24580971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 306 - 350
Target Start/End: Original strand, 28494238 - 28494282
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    |||||||||  |||||| ||||||| |||||||||||||||||||    
T  28494238 gctacttgatatagcttttcaaaaaacgctataagctcatgaaaa 28494282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 306 - 350
Target Start/End: Original strand, 28958084 - 28958128
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    |||||||||| |||||| ||||||| || ||||||||||||||||    
T  28958084 gctacttgaaatagcttttcaaaaaacgttataagctcatgaaaa 28958128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 306 - 350
Target Start/End: Original strand, 31031856 - 31031900
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    |||||||||| |||||| ||||||| ||||||||||| |||||||    
T  31031856 gctacttgaaatagcttttcaaaaaacgctataagcttatgaaaa 31031900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 306 - 342
Target Start/End: Original strand, 33982277 - 33982313
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagct 342  Q
    |||||||||| |||||||||||||| |||||||||||    
T  33982277 gctacttgaaatagcttatcaaaaaacgctataagct 33982313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 310 - 350
Target Start/End: Original strand, 42265239 - 42265279
Alignment:
Q  310 cttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    |||||| |||||| ||||||| |||||||||||||||||||    
T  42265239 cttgaaatagcttttcaaaaaacgctataagctcatgaaaa 42265279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 306 - 350
Target Start/End: Original strand, 42328126 - 42328170
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    |||||||||| |||||| ||||||| |||||||||||||| ||||    
T  42328126 gctacttgaaatagcttttcaaaaaacgctataagctcataaaaa 42328170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 306 - 342
Target Start/End: Original strand, 43544858 - 43544894
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagct 342  Q
    |||||||||| |||||||||||||| |||||||||||    
T  43544858 gctacttgaaatagcttatcaaaaagcgctataagct 43544894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 306 - 350
Target Start/End: Original strand, 46350798 - 46350842
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    |||||||||| ||| || ||||||| |||||||||||||||||||    
T  46350798 gctacttgaaatagtttttcaaaaaacgctataagctcatgaaaa 46350842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 306 - 350
Target Start/End: Complemental strand, 46536259 - 46536215
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    |||||||||| |||||| ||| ||| |||||||||||||||||||    
T  46536259 gctacttgaaatagcttttcagaaaacgctataagctcatgaaaa 46536215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 306 - 350
Target Start/End: Original strand, 46615641 - 46615685
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    |||||||||| |||||| ||||||| || ||||||||||||||||    
T  46615641 gctacttgaaatagcttttcaaaaaacgttataagctcatgaaaa 46615685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 153 - 226
Target Start/End: Complemental strand, 166814 - 166742
Alignment:
Q  153 ataagctagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaaagatgaaatgaca 226  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||| |||||||| ||| |||||||||||    
T  166814 ataagctagctgattgaatttgtagtgtttggtaaaattagcggttgaactagcttat-aaatatgaaatgaca 166742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 275 - 367
Target Start/End: Complemental strand, 166680 - 166590
Alignment:
Q  275 taaaattgagataaaaagtgctaagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctcgtg 367  Q
    |||||| ||||||||   || |||||||||||||||||| |||||||||||||||  |||||||||||  | |||||||| ||||||||||||    
T  166680 taaaatagagataaatgatgataagctataggctacttggattagcttatcaaaa--cgctataagctagtaaaaataagttataagctcgtg 166590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 2e-19; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 275 - 424
Target Start/End: Complemental strand, 5976720 - 5976572
Alignment:
Q  275 taaaattgagataaaaagtgctaagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctcgtgtaaaaat 374  Q
    |||||||||||||| ||||| | |  ||||  ||||| |||| ||||||||||| | |||||||| ||| |||||||||| || ||| ||||||| ||||    
T  5976720 taaaattgagataacaagtgatcatttataaactactcgaat-agcttatcaaagatcgctataaactcctgaaaataagttagaagttcgtgtacaaat 5976622  T
Q  375 gacagttgcgaaacggatcttttttaatcatacgagcttataagctataa 424  Q
    ||||||| | ||| |  |||||||||||||||| | ||||||||||||||    
T  5976621 gacagttaccaaatgtgtcttttttaatcatacaaacttataagctataa 5976572  T

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Target: chr6; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 165 - 376
Target Start/End: Complemental strand, 1288501 - 1288292
Alignment:
Q  165 attgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaaagatgaaatgacaaaaaatgtgcatttaattaatannnnnnnctaatcaag 264  Q
    ||||| |||||| |||||| |||||||| || ||||| || ||||||||  ||||||||||| ||||| |  ||||||||||||         ||| |||    
T  1288501 attgattttgtagtgtttgataaaattaacggttgaaataacttataaat-atgaaatgacataaaatattaatttaattaatatattttc--aattaag 1288405  T
Q  265 attgtag-ggataaaattgagataaaaagtgctaagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagct 363  Q
    ||||||| || ||||||  ||||||||||||  |||  ||| | ||||||||||| ||||||||||| |  ||||||||||||| |||||||||| | ||    
T  1288404 attgtagcgggtaaaatgaagataaaaagtgacaagtaataagatacttgaattaacttatcaaaaaacattataagctcatgagaataagctatgaact 1288305  T
Q  364 cgtgtaaaaatga 376  Q
    |||||||||||||    
T  1288304 cgtgtaaaaatga 1288292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 152 - 248
Target Start/End: Complemental strand, 29052773 - 29052677
Alignment:
Q  152 gataagctagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaaagatgaaatgaca-aaaaatgtgcatttaattaata 248  Q
    ||||||||||||||||||||||| | ||||||||||||| |||| || |  |||||||| ||| ||||||||||| |||||| |  ||||||||||||    
T  29052773 gataagctagctgattgaatttgcagtgtttggtaaaataagcggttcacctagcttat-aaatatgaaatgacataaaaatatatatttaattaata 29052677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 205
Target Start/End: Original strand, 9749801 - 9749853
Alignment:
Q  153 ataagctagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtag 205  Q
    ||||||||||||||| |||||||| |||||||||||||||| | |||||||||    
T  9749801 ataagctagctgatttaatttgtagtgtttggtaaaattagtggttgaagtag 9749853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 297 - 367
Target Start/End: Complemental strand, 3341174 - 3341104
Alignment:
Q  297 aagctataggctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctcgtg 367  Q
    ||||||||  |||||| ||||||||||||| ||||||| ||||  |||| |||||||| ||||||||||||    
T  3341174 aagctataatctactttaattagcttatcacaaaccgccataatttcataaaaataagttataagctcgtg 3341104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 275 - 332
Target Start/End: Original strand, 27903901 - 27903958
Alignment:
Q  275 taaaattgagataaaaagtgctaagctataggctacttgaattagcttatcaaaaacc 332  Q
    ||||||||||||||||| || |||| |||| |||| |||||||||||||||| |||||    
T  27903901 taaaattgagataaaaactgataaggtataagctatttgaattagcttatcacaaacc 27903958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 165 - 213
Target Start/End: Complemental strand, 724767 - 724719
Alignment:
Q  165 attgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaa 213  Q
    |||||||||||| |||||| ||||||||| | |||||||||||||||||    
T  724767 attgaatttgtagtgtttgataaaattagtggttgaagtagcttataaa 724719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 275 - 331
Target Start/End: Original strand, 9197214 - 9197270
Alignment:
Q  275 taaaattgagataaaaagtgctaagctataggctacttgaattagcttatcaaaaac 331  Q
    |||||||||||||||||||  ||| | ||| |||||||||||||| |||||||||||    
T  9197214 taaaattgagataaaaagttataaacaataagctacttgaattagtttatcaaaaac 9197270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 306 - 350
Target Start/End: Complemental strand, 12130618 - 12130574
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    |||||||||| |||||| ||||||| |||||||||||||||||||    
T  12130618 gctacttgaaatagcttttcaaaaaacgctataagctcatgaaaa 12130574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 263 - 347
Target Start/End: Original strand, 17328693 - 17328777
Alignment:
Q  263 agattgtagggataaaattgagataaaaagtgctaagctataggctacttgaattagcttatcaaaaaccgctataagctcatga 347  Q
    |||||| |||| |||||||||||||||||    | ||  ||| |||||||||||||| |||||| ||||| ||||||||||||||    
T  17328693 agattgcaggggtaaaattgagataaaaaacagtgaggcataagctacttgaattagtttatcacaaacccctataagctcatga 17328777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 306 - 350
Target Start/End: Complemental strand, 21860371 - 21860327
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    |||||||||| |||||| ||||||| |||||||||||||||||||    
T  21860371 gctacttgaaatagcttttcaaaaaacgctataagctcatgaaaa 21860327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 306 - 350
Target Start/End: Original strand, 24119201 - 24119245
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    |||||||||| |||||| ||||||| |||||||||||||||||||    
T  24119201 gctacttgaaatagcttttcaaaaaacgctataagctcatgaaaa 24119245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 275 - 330
Target Start/End: Complemental strand, 724652 - 724597
Alignment:
Q  275 taaaattgagataaaaagtgctaagctataggctacttgaattagcttatcaaaaa 330  Q
    |||||||||| ||||||||| || |||||| ||||||  |||||||||||||||||    
T  724652 taaaattgaggtaaaaagtgatacgctataagctactcaaattagcttatcaaaaa 724597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 231
Target Start/End: Original strand, 8014427 - 8014493
Alignment:
Q  164 gattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaaagatgaaatgacaaaaaa 231  Q
    |||||||||| || |||||||||||||||||  | ||| |||||||| ||| ||||||||||||||||    
T  8014427 gattgaatttatagtgtttggtaaaattagcagtcgaactagcttat-aaacatgaaatgacaaaaaa 8014493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 307 - 350
Target Start/End: Original strand, 25023418 - 25023461
Alignment:
Q  307 ctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    ||||||||| |||||| ||||||| |||||||||||||||||||    
T  25023418 ctacttgaaatagcttttcaaaaaacgctataagctcatgaaaa 25023461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 258 - 293
Target Start/End: Original strand, 33757725 - 33757760
Alignment:
Q  258 aatcaagattgtagggataaaattgagataaaaagt 293  Q
    |||||||||||||||| |||||||||||||||||||    
T  33757725 aatcaagattgtaggggtaaaattgagataaaaagt 33757760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 152 - 231
Target Start/End: Complemental strand, 34544500 - 34544422
Alignment:
Q  152 gataagctagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaaagatgaaatgacaaaaaa 231  Q
    ||||||||||| | ||||||||||| |||||| || |||||| | ||||| |||||||| ||| ||||||||||| ||||    
T  34544500 gataagctagcgggttgaatttgtagtgtttgatacaattagtggttgaactagcttat-aaatatgaaatgacataaaa 34544422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 306 - 360
Target Start/End: Complemental strand, 16800490 - 16800436
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataa 360  Q
    ||||||| ||||||||||||| ||||| |||||| || || ||||||||||||||    
T  16800490 gctacttcaattagcttatcacaaaccactataaacttataaaaataagctataa 16800436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 306 - 364
Target Start/End: Complemental strand, 17071862 - 17071804
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaataagctataagctc 364  Q
    ||||||| ||||||||||||| ||||| ||||||  | || ||||||||||||||||||    
T  17071862 gctacttcaattagcttatcacaaaccactataaatttataaaaataagctataagctc 17071804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 308 - 350
Target Start/End: Original strand, 20992229 - 20992271
Alignment:
Q  308 tacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    |||||||| |||||| ||||||| |||||||||||||||||||    
T  20992229 tacttgaaatagcttttcaaaaaacgctataagctcatgaaaa 20992271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 159 - 248
Target Start/End: Complemental strand, 5976842 - 5976750
Alignment:
Q  159 tagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaaagatgaaatgaca----aaaaatgtgcatttaattaata 248  Q
    ||||| ||||||| || |||||||||||||||| ||  |||||||| ||||||||  || ||||||||    |||||||| |||||||||||||    
T  5976842 tagctcattgaatctgcaatgtttggtaaaatttgcagttgaagtaacttataaat-ataaaatgacataaaaaaaatgtacatttaattaata 5976750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 306 - 350
Target Start/End: Complemental strand, 20645795 - 20645751
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    |||||||||| |||||| ||||||| |||||||||||||| ||||    
T  20645795 gctacttgaaatagcttttcaaaaaacgctataagctcataaaaa 20645751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 46; Significance: 5e-17; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 262 - 343
Target Start/End: Original strand, 339001 - 339081
Alignment:
Q  262 aagattgtagggataaaattgagataaaaagtgctaagctataggctacttgaattagcttatcaaaaaccgctataagctc 343  Q
    ||||||| |||| | |||| ||||||||| ||| ||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  339001 aagattgcaggggtgaaatcgagataaaaggtgataagctataagctacttgaattagcttatcaaaaa-cgctataagctc 339081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 158 - 213
Target Start/End: Original strand, 338912 - 338967
Alignment:
Q  158 ctagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttataaa 213  Q
    ||||||||||||||||||| |||||| || | |||||| |||||||||||||||||    
T  338912 ctagctgattgaatttgtagtgtttgatatagttagcggttgaagtagcttataaa 338967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 306 - 350
Target Start/End: Complemental strand, 7128 - 7084
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    |||||||||| |||||| ||||||| |||||||||||||||||||    
T  7128 gctacttgaaatagcttttcaaaaaacgctataagctcatgaaaa 7084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 153 - 211
Target Start/End: Original strand, 84838 - 84896
Alignment:
Q  153 ataagctagctgattgaatttgtaatgtttggtaaaattagcgtttgaagtagcttata 211  Q
    ||||||||||| ||||| |||||| | |||| ||||||||||  |||||||||||||||    
T  84838 ataagctagcttattgattttgtagtatttgttaaaattagcagttgaagtagcttata 84896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0325 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 306 - 350
Target Start/End: Complemental strand, 18513 - 18469
Alignment:
Q  306 gctacttgaattagcttatcaaaaaccgctataagctcatgaaaa 350  Q
    |||||||||| |||||| ||||||| || ||||||||||||||||    
T  18513 gctacttgaaatagcttttcaaaaaacgttataagctcatgaaaa 18469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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