View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15449_high_2 (Length: 867)

Name: NF15449_high_2
Description: NF15449
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15449_high_2
NF15449_high_2
[»] chr3 (143 HSPs)
chr3 (19-558)||(45530786-45531315)
chr3 (65-518)||(29172064-29172514)
chr3 (84-556)||(37641679-37642142)
chr3 (84-518)||(22146971-22147403)
chr3 (54-511)||(52338171-52338626)
chr3 (84-511)||(24340163-24340588)
chr3 (648-855)||(6110064-6110271)
chr3 (648-855)||(10572592-10572799)
chr3 (650-855)||(16482483-16482688)
chr3 (654-855)||(17781118-17781319)
chr3 (648-855)||(15600884-15601091)
chr3 (648-855)||(15607429-15607636)
chr3 (650-855)||(18522665-18522870)
chr3 (651-855)||(13211305-13211509)
chr3 (648-855)||(13248607-13248814)
chr3 (648-855)||(15357586-15357793)
chr3 (654-855)||(10579355-10579556)
chr3 (44-511)||(12158648-12159117)
chr3 (650-855)||(18519980-18520182)
chr3 (654-855)||(19089745-19089946)
chr3 (648-855)||(8490488-8490702)
chr3 (650-855)||(17200184-17200389)
chr3 (667-855)||(15342219-15342407)
chr3 (19-245)||(16728642-16728868)
chr3 (650-855)||(13516813-13517018)
chr3 (654-855)||(32056900-32057101)
chr3 (648-809)||(18640792-18640953)
chr3 (65-274)||(14818426-14818635)
chr3 (654-855)||(1647521-1647726)
chr3 (54-270)||(52212923-52213139)
chr3 (67-274)||(20417482-20417689)
chr3 (650-836)||(16200128-16200313)
chr3 (648-840)||(29924971-29925163)
chr3 (648-840)||(29974124-29974316)
chr3 (54-204)||(23395582-23395732)
chr3 (294-518)||(14818700-14818923)
chr3 (54-202)||(17548060-17548208)
chr3 (650-836)||(16200434-16200619)
chr3 (233-511)||(13511620-13511899)
chr3 (87-270)||(8604180-8604363)
chr3 (282-421)||(8604441-8604581)
chr3 (67-274)||(13968318-13968523)
chr3 (67-274)||(13973793-13973998)
chr3 (283-518)||(36167135-36167369)
chr3 (79-205)||(11850162-11850287)
chr3 (282-518)||(12536255-12536491)
chr3 (754-855)||(17136465-17136566)
chr3 (68-205)||(20188070-20188207)
chr3 (655-855)||(24253388-24253589)
chr3 (101-205)||(13667609-13667713)
chr3 (282-518)||(34851512-34851746)
chr3 (69-205)||(34851868-34852004)
chr3 (65-221)||(36166818-36166974)
chr3 (67-202)||(12270986-12271119)
chr3 (67-202)||(14085017-14085150)
chr3 (67-202)||(14090418-14090551)
chr3 (67-202)||(49399959-49400092)
chr3 (283-518)||(10550908-10551142)
chr3 (67-202)||(8582852-8582985)
chr3 (351-518)||(9511130-9511296)
chr3 (351-518)||(9519105-9519271)
chr3 (67-202)||(24122761-24122894)
chr3 (341-511)||(52212648-52212817)
chr3 (282-411)||(11061694-11061824)
chr3 (97-271)||(11061901-11062075)
chr3 (108-274)||(13327262-13327428)
chr3 (101-274)||(53770225-53770398)
chr3 (65-221)||(21618669-21618825)
chr3 (283-518)||(21618986-21619220)
chr3 (439-558)||(37038808-37038917)
chr3 (54-221)||(10550659-10550825)
chr3 (282-518)||(17547681-17547915)
chr3 (108-274)||(51961858-51962024)
chr3 (101-274)||(16260646-16260819)
chr3 (281-421)||(17100083-17100224)
chr3 (288-421)||(11882726-11882860)
chr3 (116-270)||(11882944-11883097)
chr3 (282-508)||(20188329-20188554)
chr3 (282-499)||(15517257-15517473)
chr3 (81-223)||(3991633-3991775)
chr3 (437-518)||(19568421-19568503)
chr3 (288-393)||(13327077-13327182)
chr3 (438-514)||(42324189-42324265)
chr3 (282-384)||(20417763-20417864)
chr3 (282-507)||(11849818-11850040)
chr3 (308-415)||(2843651-2843758)
chr3 (81-224)||(15517011-15517154)
chr3 (352-508)||(13667306-13667460)
chr3 (81-274)||(17099816-17100010)
chr3 (650-712)||(18534758-18534820)
chr3 (101-223)||(18910254-18910376)
chr3 (282-403)||(51961663-51961784)
chr3 (282-403)||(53770472-53770593)
chr3 (282-416)||(23491805-23491941)
chr3 (282-421)||(54423444-54423584)
chr3 (553-612)||(8490393-8490452)
chr3 (307-418)||(18910610-18910721)
chr3 (437-518)||(17513588-17513668)
chr3 (282-421)||(23395320-23395461)
chr3 (556-612)||(6109972-6110028)
chr3 (556-612)||(13248515-13248571)
chr3 (282-416)||(38167342-38167478)
chr3 (282-403)||(16260893-16261014)
chr3 (555-612)||(18640989-18641046)
chr3 (556-612)||(13211211-13211267)
chr3 (91-271)||(54423187-54423367)
chr3 (553-612)||(16482727-16482785)
chr3 (437-518)||(3393964-3394045)
chr3 (553-606)||(10579603-10579656)
chr3 (650-695)||(18510924-18510969)
chr3 (564-612)||(17136145-17136193)
chr3 (437-490)||(178720-178773)
chr3 (556-612)||(15607672-15607729)
chr3 (297-416)||(3991999-3992119)
chr3 (81-202)||(12535988-12536111)
chr3 (556-612)||(15351237-15351293)
chr3 (556-612)||(15357829-15357885)
chr3 (564-612)||(17200427-17200475)
chr3 (564-612)||(18519893-18519941)
chr3 (556-606)||(10572840-10572890)
chr3 (282-403)||(13968123-13968244)
chr3 (282-403)||(13973598-13973719)
chr3 (556-612)||(15601127-15601184)
chr3 (437-490)||(18366752-18366805)
chr3 (564-612)||(1647768-1647816)
chr3 (564-612)||(13516727-13516775)
chr3 (564-612)||(17781358-17781406)
chr3 (564-612)||(18534671-18534719)
chr3 (564-612)||(19089985-19090033)
chr3 (564-612)||(32057144-32057192)
chr3 (437-492)||(12276556-12276611)
chr3 (311-418)||(40039425-40039532)
chr3 (311-418)||(50351132-50351239)
chr3 (437-506)||(13029384-13029452)
chr3 (377-418)||(17758759-17758800)
chr3 (377-418)||(19060079-19060120)
chr3 (564-612)||(18510837-18510885)
chr3 (564-612)||(18522578-18522626)
chr3 (109-205)||(38167105-38167201)
chr3 (145-240)||(2277303-2277398)
chr3 (319-418)||(16934513-16934612)
chr3 (437-506)||(13025792-13025860)
chr3 (282-315)||(52212811-52212844)
[»] chr1 (55 HSPs)
chr1 (54-556)||(51476367-51476859)
chr1 (648-855)||(18252030-18252237)
chr1 (84-511)||(21473199-21473623)
chr1 (54-511)||(18823997-18824451)
chr1 (648-855)||(18532514-18532721)
chr1 (648-855)||(27131409-27131616)
chr1 (650-855)||(21171233-21171438)
chr1 (650-855)||(27310577-27310782)
chr1 (650-855)||(16359035-16359240)
chr1 (654-855)||(36816633-36816834)
chr1 (648-855)||(3855919-3856126)
chr1 (282-517)||(52983830-52984064)
chr1 (54-274)||(52983536-52983756)
chr1 (648-855)||(22657221-22657429)
chr1 (54-202)||(13528303-13528451)
chr1 (54-205)||(18270656-18270807)
chr1 (54-205)||(18275310-18275461)
chr1 (282-518)||(18270928-18271163)
chr1 (282-518)||(18275582-18275817)
chr1 (282-518)||(13527924-13528158)
chr1 (311-518)||(51324137-51324343)
chr1 (309-514)||(7320812-7321014)
chr1 (67-202)||(21542542-21542675)
chr1 (101-274)||(20825648-20825821)
chr1 (83-202)||(42095449-42095567)
chr1 (311-518)||(21239258-21239464)
chr1 (282-416)||(27330432-27330567)
chr1 (654-855)||(27277557-27277756)
chr1 (282-508)||(20058087-20058312)
chr1 (81-274)||(27330641-27330834)
chr1 (437-519)||(20030853-20030934)
chr1 (682-855)||(12006539-12006712)
chr1 (682-855)||(12014284-12014457)
chr1 (660-855)||(9917918-9918106)
chr1 (291-416)||(35054221-35054347)
chr1 (437-518)||(7791770-7791850)
chr1 (282-403)||(20825453-20825574)
chr1 (556-612)||(18251936-18251992)
chr1 (556-612)||(18532757-18532813)
chr1 (81-205)||(20053790-20053914)
chr1 (307-418)||(17148185-17148296)
chr1 (555-612)||(27310821-27310878)
chr1 (555-612)||(16359280-16359337)
chr1 (109-192)||(17147838-17147921)
chr1 (84-141)||(21477772-21477829)
chr1 (654-723)||(30720625-30720694)
chr1 (564-609)||(36816881-36816926)
chr1 (564-612)||(21171479-21171527)
chr1 (553-612)||(27131652-27131707)
chr1 (567-612)||(3856164-3856209)
chr1 (437-490)||(21660130-21660183)
chr1 (564-608)||(22657469-22657513)
chr1 (91-205)||(7321184-7321298)
chr1 (311-418)||(39060977-39061084)
chr1 (233-274)||(35054098-35054139)
[»] chr7 (93 HSPs)
chr7 (19-413)||(37784671-37785058)
chr7 (84-515)||(19486179-19486609)
chr7 (648-855)||(29327784-29327991)
chr7 (648-855)||(11536062-11536269)
chr7 (648-855)||(11542980-11543187)
chr7 (650-855)||(15152445-15152650)
chr7 (650-855)||(15148144-15148349)
chr7 (650-855)||(18561009-18561214)
chr7 (282-556)||(11054315-11054579)
chr7 (650-855)||(12750828-12751033)
chr7 (654-851)||(12738542-12738739)
chr7 (54-274)||(11054021-11054241)
chr7 (650-855)||(18257842-18258047)
chr7 (54-205)||(3289328-3289479)
chr7 (54-205)||(13256021-13256172)
chr7 (54-274)||(21734941-21735161)
chr7 (83-274)||(4280464-4280654)
chr7 (84-221)||(10063551-10063688)
chr7 (68-205)||(17467953-17468090)
chr7 (68-205)||(17585124-17585261)
chr7 (68-205)||(37380225-37380362)
chr7 (282-518)||(13256296-13256531)
chr7 (67-202)||(19616781-19616914)
chr7 (67-202)||(27565324-27565457)
chr7 (65-221)||(48273613-48273770)
chr7 (283-518)||(48274087-48274321)
chr7 (107-274)||(2191073-2191240)
chr7 (282-508)||(17467607-17467831)
chr7 (282-508)||(17585383-17585607)
chr7 (108-274)||(25123649-25123815)
chr7 (437-514)||(13698856-13698933)
chr7 (282-416)||(26070944-26071079)
chr7 (282-416)||(26094731-26094866)
chr7 (654-836)||(13392157-13392338)
chr7 (288-416)||(2028359-2028488)
chr7 (81-270)||(26071136-26071325)
chr7 (81-270)||(26094923-26095112)
chr7 (101-223)||(14251771-14251893)
chr7 (283-510)||(3288980-3289205)
chr7 (146-274)||(15525453-15525581)
chr7 (109-264)||(42057220-42057375)
chr7 (291-416)||(111955-112081)
chr7 (101-219)||(2028127-2028245)
chr7 (101-223)||(15926828-15926950)
chr7 (437-518)||(33001920-33001999)
chr7 (670-855)||(2364917-2365101)
chr7 (282-403)||(25123889-25124010)
chr7 (282-403)||(42056992-42057113)
chr7 (291-403)||(3894477-3894589)
chr7 (307-418)||(370704-370815)
chr7 (311-518)||(40554727-40554932)
chr7 (282-403)||(2190878-2190999)
chr7 (282-416)||(3049018-3049154)
chr7 (654-838)||(39111819-39112002)
chr7 (434-513)||(10063120-10063199)
chr7 (307-418)||(13757987-13758098)
chr7 (81-240)||(13866686-13866845)
chr7 (307-418)||(14251426-14251537)
chr7 (282-508)||(37380484-37380708)
chr7 (556-612)||(2653275-2653331)
chr7 (681-840)||(7396221-7396381)
chr7 (556-612)||(11543223-11543279)
chr7 (564-612)||(12738451-12738499)
chr7 (101-223)||(370348-370470)
chr7 (282-518)||(21734630-21734867)
chr7 (437-518)||(8756359-8756440)
chr7 (438-518)||(29004831-29004909)
chr7 (556-612)||(11536305-11536361)
chr7 (564-612)||(12750741-12750789)
chr7 (564-612)||(15152358-15152406)
chr7 (307-418)||(18980548-18980659)
chr7 (564-611)||(29327698-29327745)
chr7 (309-418)||(15927186-15927296)
chr7 (282-403)||(15525268-15525389)
chr7 (455-511)||(8249465-8249520)
chr7 (292-404)||(10063204-10063316)
chr7 (434-518)||(13898230-13898313)
chr7 (564-612)||(15148057-15148105)
chr7 (109-192)||(13757640-13757723)
chr7 (311-418)||(28720332-28720439)
chr7 (282-403)||(4280728-4280849)
chr7 (698-763)||(10234179-10234244)
chr7 (443-515)||(48744297-48744369)
chr7 (564-611)||(13392038-13392085)
chr7 (319-518)||(21734071-21734270)
chr7 (288-388)||(13866472-13866573)
chr7 (555-612)||(18258087-18258144)
chr7 (233-274)||(42057189-42057230)
chr7 (648-680)||(2653207-2653239)
chr7 (109-205)||(3048788-3048884)
chr7 (722-765)||(3132748-3132791)
chr7 (90-141)||(38898230-38898281)
chr7 (109-223)||(18980893-18981007)
[»] scaffold0117 (2 HSPs)
scaffold0117 (54-518)||(40423-40886)
scaffold0117 (341-518)||(25797-25973)
[»] chr5 (55 HSPs)
chr5 (54-511)||(8952257-8952713)
chr5 (84-518)||(40726097-40726529)
chr5 (648-855)||(24695466-24695673)
chr5 (648-855)||(18569863-18570070)
chr5 (650-855)||(19714498-19714703)
chr5 (654-855)||(19707218-19707419)
chr5 (65-274)||(22007406-22007614)
chr5 (54-205)||(22357468-22357619)
chr5 (81-274)||(21109060-21109253)
chr5 (55-202)||(21406198-21406345)
chr5 (68-202)||(23539182-23539316)
chr5 (80-205)||(10817167-10817292)
chr5 (81-274)||(22111309-22111502)
chr5 (67-202)||(1857063-1857196)
chr5 (653-836)||(27347497-27347679)
chr5 (101-274)||(21204112-21204285)
chr5 (283-518)||(18318416-18318650)
chr5 (288-518)||(22777279-22777508)
chr5 (67-202)||(21675031-21675164)
chr5 (289-421)||(21109334-21109467)
chr5 (440-556)||(21405814-21405920)
chr5 (654-855)||(22547016-22547217)
chr5 (65-221)||(20765860-20766016)
chr5 (65-219)||(18318813-18318965)
chr5 (304-501)||(21297585-21297781)
chr5 (304-499)||(21311130-21311324)
chr5 (281-415)||(22111575-22111710)
chr5 (282-518)||(22357113-22357347)
chr5 (282-416)||(20711509-20711644)
chr5 (648-757)||(39537962-39538071)
chr5 (283-510)||(20765474-20765699)
chr5 (652-833)||(17285754-17285935)
chr5 (282-393)||(21204359-21204470)
chr5 (101-274)||(20711262-20711435)
chr5 (342-518)||(23539431-23539604)
chr5 (310-418)||(9730912-9731020)
chr5 (761-853)||(39538701-39538793)
chr5 (289-403)||(21650138-21650252)
chr5 (556-612)||(24695709-24695765)
chr5 (282-518)||(10817414-10817650)
chr5 (553-612)||(19714742-19714801)
chr5 (714-855)||(18807034-18807175)
chr5 (652-833)||(17298907-17299088)
chr5 (654-757)||(31886537-31886640)
chr5 (555-612)||(27347722-27347779)
chr5 (564-612)||(19707462-19707510)
chr5 (289-416)||(22007197-22007325)
chr5 (120-278)||(21649903-21650061)
chr5 (101-224)||(9731256-9731379)
chr5 (564-612)||(18570108-18570156)
chr5 (437-517)||(22470588-22470667)
chr5 (674-731)||(33477422-33477479)
chr5 (350-418)||(20197648-20197716)
chr5 (564-611)||(39537878-39537925)
chr5 (94-180)||(20727222-20727308)
[»] scaffold0377 (1 HSPs)
scaffold0377 (44-511)||(16319-16785)
[»] scaffold0175 (2 HSPs)
scaffold0175 (68-510)||(18239-18678)
scaffold0175 (289-367)||(14392-14470)
[»] chr2 (56 HSPs)
chr2 (174-556)||(19358381-19358757)
chr2 (648-855)||(21330248-21330455)
chr2 (648-855)||(18796506-18796713)
chr2 (54-202)||(6477805-6477953)
chr2 (83-274)||(27367069-27367259)
chr2 (650-855)||(18619807-18620011)
chr2 (108-274)||(19659239-19659405)
chr2 (282-415)||(19659479-19659613)
chr2 (67-202)||(6743882-6744015)
chr2 (91-274)||(23822451-23822634)
chr2 (91-274)||(23831530-23831713)
chr2 (67-202)||(43693887-43694020)
chr2 (288-518)||(6477446-6477674)
chr2 (101-273)||(21274946-21275118)
chr2 (67-202)||(201127-201260)
chr2 (654-793)||(19692598-19692737)
chr2 (282-518)||(22703579-22703815)
chr2 (713-840)||(20977957-20978084)
chr2 (304-501)||(24087798-24087993)
chr2 (437-518)||(43707254-43707335)
chr2 (81-202)||(45618180-45618301)
chr2 (281-411)||(23822247-23822378)
chr2 (281-411)||(23831326-23831457)
chr2 (291-421)||(36891359-36891490)
chr2 (101-223)||(42178834-42178955)
chr2 (146-274)||(36891572-36891700)
chr2 (297-418)||(42178489-42178610)
chr2 (556-612)||(21330493-21330549)
chr2 (81-205)||(24088138-24088262)
chr2 (307-418)||(12642170-12642281)
chr2 (101-223)||(3799476-3799598)
chr2 (682-855)||(36270199-36270373)
chr2 (304-501)||(45617836-45618032)
chr2 (19-112)||(19358289-19358382)
chr2 (282-403)||(21274750-21274871)
chr2 (310-418)||(12636396-12636504)
chr2 (307-418)||(3799131-3799242)
chr2 (291-421)||(9653568-9653699)
chr2 (311-414)||(16935056-16935159)
chr2 (311-414)||(17005716-17005819)
chr2 (81-223)||(25876943-25877085)
chr2 (437-518)||(21245442-21245523)
chr2 (437-518)||(24273244-24273325)
chr2 (311-418)||(34877461-34877569)
chr2 (682-855)||(18822115-18822290)
chr2 (174-278)||(9653778-9653882)
chr2 (19-87)||(14693566-14693634)
chr2 (101-223)||(8943107-8943229)
chr2 (101-223)||(12636741-12636863)
chr2 (101-223)||(12642495-12642617)
chr2 (282-403)||(27366874-27366995)
chr2 (310-418)||(8943466-8943574)
chr2 (437-518)||(26904164-26904243)
chr2 (768-855)||(12098618-12098705)
chr2 (768-855)||(18852059-18852146)
chr2 (786-855)||(22183483-22183552)
[»] chr8 (66 HSPs)
chr8 (44-505)||(34301915-34302376)
chr8 (44-511)||(23450837-23451305)
chr8 (648-855)||(21940665-21940872)
chr8 (650-855)||(22171491-22171694)
chr8 (654-855)||(6094129-6094330)
chr8 (44-511)||(24495949-24496436)
chr8 (650-849)||(28554885-28555084)
chr8 (654-855)||(24642655-24642856)
chr8 (282-518)||(22583869-22584103)
chr8 (282-518)||(23889409-23889642)
chr8 (54-270)||(23889115-23889331)
chr8 (54-274)||(22584177-22584395)
chr8 (290-556)||(3273499-3273756)
chr8 (29-215)||(3273304-3273490)
chr8 (654-781)||(24636860-24636987)
chr8 (81-273)||(5080552-5080744)
chr8 (84-270)||(17611792-17611978)
chr8 (283-518)||(26220156-26220390)
chr8 (54-221)||(26219926-26220093)
chr8 (65-221)||(26222812-26222968)
chr8 (67-202)||(23825626-23825759)
chr8 (282-511)||(17611507-17611735)
chr8 (67-274)||(30766429-30766634)
chr8 (437-518)||(22532345-22532426)
chr8 (437-518)||(22537030-22537111)
chr8 (67-202)||(3698088-3698221)
chr8 (342-515)||(24979780-24979951)
chr8 (437-518)||(39694491-39694572)
chr8 (146-274)||(16039778-16039906)
chr8 (288-393)||(5080825-5080930)
chr8 (289-416)||(273879-274007)
chr8 (289-416)||(641842-641970)
chr8 (307-418)||(13721456-13721567)
chr8 (437-515)||(44522393-44522470)
chr8 (289-416)||(827648-827776)
chr8 (660-852)||(38232380-38232570)
chr8 (307-418)||(16873579-16873690)
chr8 (553-612)||(21940570-21940629)
chr8 (288-421)||(26222590-26222724)
chr8 (282-403)||(16039583-16039704)
chr8 (437-518)||(32950661-32950742)
chr8 (556-612)||(22070108-22070164)
chr8 (555-612)||(6094030-6094087)
chr8 (146-223)||(13721801-13721878)
chr8 (304-416)||(20481057-20481170)
chr8 (318-418)||(3431810-3431910)
chr8 (556-612)||(22171396-22171452)
chr8 (289-393)||(24386456-24386560)
chr8 (564-608)||(24642564-24642608)
chr8 (564-612)||(28554799-28554847)
chr8 (669-852)||(2375027-2375208)
chr8 (311-418)||(17501807-17501914)
chr8 (101-223)||(3432155-3432277)
chr8 (146-192)||(16873954-16874000)
chr8 (678-839)||(32872857-32873019)
chr8 (146-274)||(273670-273798)
chr8 (146-274)||(642051-642179)
chr8 (146-274)||(827857-827985)
chr8 (104-205)||(20480800-20480901)
chr8 (282-403)||(30766234-30766355)
chr8 (19-87)||(22244758-22244826)
chr8 (686-733)||(10920234-10920281)
chr8 (744-855)||(14983920-14984030)
chr8 (19-86)||(23947554-23947621)
chr8 (173-223)||(21260405-21260457)
chr8 (437-510)||(39364532-39364605)
[»] scaffold0149 (1 HSPs)
scaffold0149 (44-511)||(35760-36225)
[»] chr6 (83 HSPs)
chr6 (54-518)||(18259386-18259848)
chr6 (84-518)||(8226943-8227376)
chr6 (648-855)||(29308890-29309097)
chr6 (648-855)||(29315850-29316057)
chr6 (650-855)||(16566320-16566525)
chr6 (648-855)||(27381252-27381459)
chr6 (648-855)||(27471635-27471842)
chr6 (650-855)||(17684469-17684674)
chr6 (648-855)||(17691440-17691647)
chr6 (650-855)||(25537159-25537364)
chr6 (650-855)||(188977-189182)
chr6 (650-855)||(11651725-11651930)
chr6 (288-518)||(13750488-13750715)
chr6 (54-274)||(13750795-13751015)
chr6 (208-518)||(23532099-23532407)
chr6 (54-221)||(24267156-24267323)
chr6 (79-205)||(5110281-5110407)
chr6 (650-855)||(13359269-13359474)
chr6 (83-274)||(24562783-24562973)
chr6 (79-205)||(5289640-5289766)
chr6 (81-274)||(25650399-25650592)
chr6 (68-205)||(29416125-29416262)
chr6 (65-224)||(16448301-16448458)
chr6 (326-518)||(28948221-28948412)
chr6 (288-505)||(24267455-24267671)
chr6 (282-518)||(5109924-5110159)
chr6 (283-518)||(16447986-16448220)
chr6 (324-511)||(24441306-24441491)
chr6 (288-518)||(29415766-29415997)
chr6 (288-421)||(25650672-25650806)
chr6 (101-274)||(13621531-13621704)
chr6 (101-278)||(15735625-15735802)
chr6 (101-274)||(18003391-18003564)
chr6 (369-501)||(31468006-31468137)
chr6 (304-416)||(18776609-18776722)
chr6 (109-274)||(23994115-23994280)
chr6 (282-508)||(5289298-5289518)
chr6 (101-223)||(16231153-16231275)
chr6 (81-189)||(31468339-31468447)
chr6 (439-556)||(25753198-25753305)
chr6 (439-556)||(25755368-25755475)
chr6 (282-403)||(18003196-18003317)
chr6 (282-403)||(23994354-23994475)
chr6 (437-513)||(20177753-20177829)
chr6 (687-855)||(20553587-20553755)
chr6 (437-513)||(22158162-22158238)
chr6 (307-418)||(16231509-16231620)
chr6 (551-612)||(17691683-17691744)
chr6 (307-418)||(18087350-18087461)
chr6 (667-840)||(8509941-8510115)
chr6 (281-403)||(13621336-13621458)
chr6 (439-513)||(19102699-19102773)
chr6 (101-219)||(23977031-23977149)
chr6 (556-612)||(27381495-27381551)
chr6 (556-612)||(27471878-27471934)
chr6 (556-612)||(29308798-29308854)
chr6 (556-612)||(29315758-29315814)
chr6 (307-418)||(23977386-23977497)
chr6 (104-274)||(18776343-18776513)
chr6 (58-132)||(22212090-22212164)
chr6 (437-518)||(16132635-16132716)
chr6 (556-612)||(17684712-17684768)
chr6 (671-855)||(27925772-27925961)
chr6 (555-610)||(11651629-11651684)
chr6 (439-518)||(18659196-18659275)
chr6 (311-501)||(19174803-19174991)
chr6 (686-854)||(20736604-20736773)
chr6 (282-403)||(15735455-15735576)
chr6 (686-855)||(17850495-17850663)
chr6 (437-518)||(29847488-29847569)
chr6 (564-612)||(25537405-25537453)
chr6 (655-710)||(31258065-31258120)
chr6 (109-223)||(25645740-25645854)
chr6 (437-518)||(19443246-19443326)
chr6 (282-403)||(24563047-24563168)
chr6 (564-612)||(13359512-13359560)
chr6 (564-612)||(16566563-16566611)
chr6 (439-501)||(16136053-16136115)
chr6 (437-510)||(25348115-25348188)
chr6 (304-416)||(26089191-26089304)
chr6 (570-612)||(16394484-16394526)
chr6 (583-612)||(189221-189250)
chr6 (664-729)||(22259925-22259990)
[»] chr4 (105 HSPs)
chr4 (54-511)||(20898966-20899421)
chr4 (84-506)||(15373738-15374158)
chr4 (648-855)||(19926760-19926967)
chr4 (56-518)||(27028128-27028584)
chr4 (68-518)||(22354070-22354517)
chr4 (648-855)||(26970463-26970670)
chr4 (648-855)||(55612683-55612890)
chr4 (648-855)||(5707320-5707527)
chr4 (648-855)||(26963640-26963847)
chr4 (648-855)||(5713948-5714155)
chr4 (648-855)||(10621333-10621540)
chr4 (84-511)||(16223787-16224211)
chr4 (648-855)||(868597-868804)
chr4 (648-855)||(10628412-10628619)
chr4 (650-855)||(18262214-18262419)
chr4 (84-511)||(15371457-15371871)
chr4 (650-855)||(28393134-28393339)
chr4 (650-855)||(4426604-4426808)
chr4 (85-511)||(15367939-15368362)
chr4 (650-855)||(18269070-18269280)
chr4 (54-420)||(4615359-4615727)
chr4 (660-855)||(8845215-8845410)
chr4 (660-855)||(8858179-8858374)
chr4 (85-421)||(15402952-15403287)
chr4 (81-274)||(26921987-26922179)
chr4 (65-274)||(16157118-16157326)
chr4 (54-244)||(14932912-14933102)
chr4 (54-244)||(14942117-14942307)
chr4 (54-205)||(18230050-18230201)
chr4 (68-211)||(4830741-4830884)
chr4 (68-211)||(4834036-4834179)
chr4 (648-763)||(12357136-12357251)
chr4 (54-205)||(2584714-2584868)
chr4 (656-855)||(20311299-20311499)
chr4 (56-205)||(13446845-13446993)
chr4 (95-205)||(6512003-6512113)
chr4 (283-518)||(14280854-14281088)
chr4 (238-492)||(14931362-14931615)
chr4 (91-274)||(15852253-15852436)
chr4 (327-518)||(6512273-6512462)
chr4 (282-421)||(52266205-52266344)
chr4 (65-221)||(54798493-54798650)
chr4 (65-221)||(14280537-14280693)
chr4 (83-202)||(11201987-11202105)
chr4 (83-202)||(11208718-11208836)
chr4 (283-513)||(54798123-54798352)
chr4 (282-518)||(4830371-4830605)
chr4 (282-518)||(4833666-4833900)
chr4 (288-416)||(26921778-26921907)
chr4 (650-854)||(5616215-5616421)
chr4 (437-556)||(9870631-9870740)
chr4 (304-514)||(18230367-18230575)
chr4 (654-855)||(10677555-10677753)
chr4 (654-855)||(10891195-10891393)
chr4 (282-411)||(30233202-30233332)
chr4 (65-221)||(8574608-8574765)
chr4 (654-855)||(5668125-5668327)
chr4 (654-855)||(35223576-35223767)
chr4 (283-518)||(2584358-2584591)
chr4 (437-518)||(3338129-3338210)
chr4 (81-274)||(30233406-30233599)
chr4 (97-270)||(52266401-52266574)
chr4 (282-421)||(15852039-15852179)
chr4 (282-518)||(13447134-13447368)
chr4 (101-223)||(7132918-7133040)
chr4 (556-612)||(5713856-5713912)
chr4 (556-612)||(19927003-19927059)
chr4 (556-612)||(26963548-26963604)
chr4 (556-612)||(26970371-26970427)
chr4 (307-418)||(7132593-7132704)
chr4 (307-418)||(20000340-20000451)
chr4 (553-612)||(55612591-55612650)
chr4 (101-219)||(15273232-15273350)
chr4 (101-223)||(19999984-20000106)
chr4 (555-612)||(5707227-5707284)
chr4 (311-415)||(5683060-5683164)
chr4 (556-612)||(10621576-10621632)
chr4 (556-612)||(12357044-12357100)
chr4 (561-612)||(868510-868561)
chr4 (556-612)||(10628655-10628711)
chr4 (556-612)||(17142372-17142428)
chr4 (554-610)||(28393380-28393436)
chr4 (292-416)||(16157410-16157535)
chr4 (564-612)||(4426847-4426895)
chr4 (556-612)||(18268976-18269032)
chr4 (697-764)||(39074278-39074346)
chr4 (674-855)||(21454137-21454319)
chr4 (282-347)||(15273059-15273124)
chr4 (85-134)||(15370266-15370315)
chr4 (563-612)||(55992680-55992729)
chr4 (318-418)||(54363791-54363891)
chr4 (311-418)||(15214119-15214226)
chr4 (437-511)||(15991026-15991099)
chr4 (571-612)||(5668371-5668412)
chr4 (283-348)||(8574316-8574381)
chr4 (564-612)||(8845118-8845166)
chr4 (564-612)||(8858082-8858130)
chr4 (572-612)||(18262136-18262176)
chr4 (785-837)||(39074218-39074270)
chr4 (686-854)||(30040750-30040919)
chr4 (320-418)||(45314400-45314498)
chr4 (437-518)||(10705491-10705572)
chr4 (437-518)||(10919261-10919342)
chr4 (571-612)||(20311220-20311261)
chr4 (778-847)||(56516186-56516255)
[»] scaffold0107 (1 HSPs)
scaffold0107 (56-511)||(3271-3724)
[»] scaffold0331 (1 HSPs)
scaffold0331 (90-518)||(4119-4542)
[»] scaffold0234 (5 HSPs)
scaffold0234 (648-855)||(2321-2528)
scaffold0234 (648-855)||(11212-11419)
scaffold0234 (556-612)||(2564-2620)
scaffold0234 (556-612)||(11455-11511)
scaffold0234 (109-205)||(18357-18453)
[»] scaffold0017 (3 HSPs)
scaffold0017 (77-556)||(695-1165)
scaffold0017 (77-403)||(7589-7916)
scaffold0017 (311-418)||(26374-26480)
[»] scaffold0390 (4 HSPs)
scaffold0390 (648-855)||(6934-7141)
scaffold0390 (648-855)||(13950-14157)
scaffold0390 (554-612)||(14193-14251)
scaffold0390 (556-612)||(7177-7233)
[»] scaffold0371 (1 HSPs)
scaffold0371 (29-511)||(3228-3711)
[»] scaffold0220 (2 HSPs)
scaffold0220 (648-855)||(18288-18495)
scaffold0220 (555-612)||(18195-18252)
[»] scaffold0433 (2 HSPs)
scaffold0433 (648-855)||(7107-7314)
scaffold0433 (556-612)||(7015-7071)
[»] scaffold0657 (2 HSPs)
scaffold0657 (648-855)||(993-1200)
scaffold0657 (556-612)||(901-957)
[»] scaffold0247 (1 HSPs)
scaffold0247 (85-511)||(17468-17891)
[»] scaffold0186 (2 HSPs)
scaffold0186 (648-855)||(25990-26197)
scaffold0186 (556-611)||(26231-26286)
[»] scaffold0962 (1 HSPs)
scaffold0962 (78-518)||(825-1265)
[»] scaffold0063 (2 HSPs)
scaffold0063 (650-855)||(5531-5736)
scaffold0063 (564-612)||(5444-5492)
[»] scaffold0042 (2 HSPs)
scaffold0042 (19-232)||(47049-47262)
scaffold0042 (437-511)||(51966-52039)
[»] scaffold0181 (2 HSPs)
scaffold0181 (158-518)||(25730-26090)
scaffold0181 (54-162)||(33944-34052)
[»] scaffold0720 (1 HSPs)
scaffold0720 (170-510)||(662-1000)
[»] scaffold2046 (2 HSPs)
scaffold2046 (288-518)||(801-1028)
scaffold2046 (54-274)||(501-721)
[»] scaffold0037 (6 HSPs)
scaffold0037 (282-518)||(113181-113416)
scaffold0037 (282-518)||(118015-118250)
scaffold0037 (292-388)||(25409-25505)
scaffold0037 (282-416)||(94406-94542)
scaffold0037 (109-274)||(25588-25753)
scaffold0037 (101-192)||(94160-94251)
[»] scaffold0008 (4 HSPs)
scaffold0008 (650-831)||(230365-230545)
scaffold0008 (283-518)||(72262-72496)
scaffold0008 (571-612)||(230584-230625)
scaffold0008 (18-87)||(136246-136315)
[»] scaffold0309 (4 HSPs)
scaffold0309 (54-274)||(6297-6517)
scaffold0309 (54-274)||(8449-8669)
scaffold0309 (282-518)||(8743-8976)
scaffold0309 (282-358)||(6591-6667)
[»] scaffold0490 (2 HSPs)
scaffold0490 (54-274)||(5215-5435)
scaffold0490 (282-518)||(5488-5720)
[»] scaffold0429 (2 HSPs)
scaffold0429 (65-257)||(2448-2640)
scaffold0429 (282-518)||(2209-2444)
[»] scaffold0123 (2 HSPs)
scaffold0123 (54-518)||(1480-1937)
scaffold0123 (311-514)||(6908-7110)
[»] scaffold0453 (2 HSPs)
scaffold0453 (282-506)||(3720-3943)
scaffold0453 (54-274)||(3426-3646)
[»] scaffold0004 (7 HSPs)
scaffold0004 (54-205)||(59738-59889)
scaffold0004 (282-518)||(75394-75630)
scaffold0004 (282-518)||(60031-60266)
scaffold0004 (288-518)||(72550-72782)
scaffold0004 (101-278)||(187736-187913)
scaffold0004 (81-189)||(75148-75256)
scaffold0004 (282-357)||(187612-187687)
[»] scaffold0261 (2 HSPs)
scaffold0261 (81-274)||(6899-7092)
scaffold0261 (288-416)||(6690-6819)
[»] scaffold0021 (3 HSPs)
scaffold0021 (68-211)||(146948-147091)
scaffold0021 (282-518)||(147227-147461)
scaffold0021 (291-415)||(87737-87862)
[»] scaffold0047 (2 HSPs)
scaffold0047 (81-274)||(76525-76718)
scaffold0047 (282-421)||(76792-76932)
[»] scaffold0273 (2 HSPs)
scaffold0273 (54-202)||(7011-7157)
scaffold0273 (304-518)||(7305-7518)
[»] scaffold0022 (2 HSPs)
scaffold0022 (65-221)||(116650-116806)
scaffold0022 (283-518)||(117033-117266)
[»] scaffold0077 (1 HSPs)
scaffold0077 (84-202)||(14493-14611)
[»] scaffold0188 (1 HSPs)
scaffold0188 (54-221)||(131-298)
[»] scaffold0106 (2 HSPs)
scaffold0106 (67-202)||(38887-39020)
scaffold0106 (437-518)||(21741-21822)
[»] scaffold0076 (2 HSPs)
scaffold0076 (67-202)||(29703-29836)
scaffold0076 (67-202)||(35104-35237)
[»] scaffold0028 (3 HSPs)
scaffold0028 (67-202)||(46537-46670)
scaffold0028 (67-202)||(51941-52074)
scaffold0028 (81-134)||(38689-38742)
[»] scaffold0011 (1 HSPs)
scaffold0011 (67-202)||(174119-174252)
[»] scaffold0251 (3 HSPs)
scaffold0251 (101-274)||(14284-14457)
scaffold0251 (282-403)||(14089-14210)
scaffold0251 (91-223)||(22381-22513)
[»] scaffold0083 (2 HSPs)
scaffold0083 (437-518)||(10967-11048)
scaffold0083 (437-518)||(5249-5330)
[»] scaffold1276 (2 HSPs)
scaffold1276 (341-518)||(804-978)
scaffold1276 (67-205)||(486-622)
[»] scaffold0574 (2 HSPs)
scaffold0574 (101-278)||(10379-10556)
scaffold0574 (282-403)||(10209-10330)
[»] scaffold0256 (1 HSPs)
scaffold0256 (437-515)||(2060-2138)
[»] scaffold0825 (1 HSPs)
scaffold0825 (437-514)||(602-679)
[»] scaffold0174 (6 HSPs)
scaffold0174 (377-518)||(19405-19545)
scaffold0174 (86-205)||(15770-15889)
scaffold0174 (444-518)||(11154-11228)
scaffold0174 (444-518)||(5034-5108)
scaffold0174 (92-205)||(4704-4817)
scaffold0174 (92-205)||(10825-10938)
[»] scaffold0113 (1 HSPs)
scaffold0113 (434-515)||(35245-35326)
[»] scaffold0111 (1 HSPs)
scaffold0111 (81-203)||(36066-36189)
[»] scaffold1957 (2 HSPs)
scaffold1957 (81-205)||(395-519)
scaffold1957 (369-421)||(120-173)
[»] scaffold0176 (2 HSPs)
scaffold0176 (648-712)||(8446-8510)
scaffold0176 (556-612)||(8546-8602)
[»] scaffold0597 (2 HSPs)
scaffold0597 (297-416)||(1666-1786)
scaffold0597 (109-223)||(2011-2125)
[»] scaffold0244 (2 HSPs)
scaffold0244 (304-416)||(23192-23305)
scaffold0244 (81-192)||(23483-23594)
[»] scaffold0080 (2 HSPs)
scaffold0080 (437-518)||(29741-29821)
scaffold0080 (437-518)||(35206-35286)
[»] scaffold0203 (1 HSPs)
scaffold0203 (556-612)||(23769-23825)
[»] scaffold0025 (1 HSPs)
scaffold0025 (282-416)||(146030-146166)
[»] scaffold0465 (2 HSPs)
scaffold0465 (296-416)||(10652-10773)
scaffold0465 (109-278)||(10856-11025)
[»] scaffold0303 (2 HSPs)
scaffold0303 (101-202)||(968-1069)
scaffold0303 (282-416)||(687-823)
[»] scaffold0326 (2 HSPs)
scaffold0326 (556-612)||(16523-16579)
scaffold0326 (648-681)||(16615-16648)
[»] scaffold0126 (1 HSPs)
scaffold0126 (311-492)||(6682-6860)
[»] scaffold0706 (2 HSPs)
scaffold0706 (101-192)||(7517-7608)
scaffold0706 (282-403)||(7240-7362)
[»] scaffold0342 (2 HSPs)
scaffold0342 (81-167)||(5107-5193)
scaffold0342 (282-388)||(5372-5479)
[»] scaffold0447 (6 HSPs)
scaffold0447 (304-416)||(4021-4134)
scaffold0447 (304-416)||(8635-8748)
scaffold0447 (437-492)||(7610-7665)
scaffold0447 (437-492)||(12224-12279)
scaffold0447 (104-205)||(3754-3855)
scaffold0447 (104-205)||(8368-8469)
[»] scaffold0383 (3 HSPs)
scaffold0383 (304-416)||(6629-6742)
scaffold0383 (437-492)||(10219-10274)
scaffold0383 (104-205)||(6362-6463)
[»] scaffold0032 (2 HSPs)
scaffold0032 (304-416)||(55035-55148)
scaffold0032 (109-223)||(54690-54804)
[»] scaffold0003 (2 HSPs)
scaffold0003 (103-205)||(146758-146860)
scaffold0003 (282-370)||(147002-147091)
[»] scaffold0637 (1 HSPs)
scaffold0637 (555-612)||(8943-9000)
[»] scaffold0112 (1 HSPs)
scaffold0112 (146-219)||(12654-12727)
[»] scaffold0705 (1 HSPs)
scaffold0705 (556-612)||(41-97)
[»] scaffold0565 (2 HSPs)
scaffold0565 (564-612)||(10202-10250)
scaffold0565 (667-698)||(10127-10158)
[»] scaffold0125 (1 HSPs)
scaffold0125 (311-418)||(28182-28289)
[»] scaffold0767 (1 HSPs)
scaffold0767 (554-592)||(1-39)
[»] scaffold0737 (1 HSPs)
scaffold0737 (471-514)||(6036-6079)
[»] scaffold0170 (1 HSPs)
scaffold0170 (571-608)||(5893-5930)


Alignment Details
Target: chr3 (Bit Score: 322; Significance: 0; HSPs: 143)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 322; E-Value: 0
Query Start/End: Original strand, 19 - 558
Target Start/End: Complemental strand, 45531315 - 45530786
Alignment:
Q  19 ttaattcaggctctctgaaacacaatataatcctcaacaactttctttcctaccccagggaccaactcaagaactcattagaccctttatacaaagttat 118  Q
    ||||||||| ||| |||||||||||||||||  | |||||||||| |||||||||||  |||||||||| |||||||||||||||||||||||| |||||    
T  45531315 ttaattcagactcactgaaacacaatataattatgaacaactttcattcctaccccaaagaccaactcacgaactcattagaccctttatacaa-gttat 45531217  T
Q  119 ttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggtt 218  Q
    |||||| ||||||||||||||||  || |||||||||||||||| ||||| |||||||||| ||||||||||||||| |||||| ||  |||||||||||    
T  45531216 ttcttttctaaaaacatctctagatggctaggataaagtccctatacttaggaagaagtttagaagcaattggagtggagaaaattgcatttttaaggtt 45531117  T
Q  219 tctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgatttttccagcatctctagacatcatcagattttcaacattcacgttttcgctc 318  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||  ||||||||||||||    
T  45531116 tctagtgtgacagaatcgtggcacgttggtctcccatcgtggcacgatttttccagcatctctagacaacatcatattttcaaccctcacgttttcgctc 45531017  T
Q  319 ataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacag-aaaattcaagtttcaacc 417  Q
    ||||||||||||| ||||||||||||||||  |||||||||||| |||||||||||| ||| ||||||||||||||||||| |||||||||||| |||||    
T  45531016 ataaaaatcaaaccgttaatctgttttcgataccgttttcacctacatgttcctgacacttggccctatcataatctacagaaaaattcaagttccaacc 45530917  T
Q  418 acccnnnnnnnntcgatttccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaaccca 517  Q
    ||||        | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||          
T  45530916 acccaaaaaaaattgatttccaaacctcacataatcccctatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcctaattttcatc------ 45530823  T
Q  518 atgtaacccaaccccaaaactggttctaatcattgtactgt 558  Q
        |||||||||||||||| ||||||||||||||||||||    
T  45530822 ----aacccaaccccaaaacaggttctaatcattgtactgt 45530786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 65 - 518
Target Start/End: Complemental strand, 29172514 - 29172064
Alignment:
Q  65 ttcctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctaca 164  Q
    ||||||||||| ||| ||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||||  |||||||||||||||||||||    
T  29172514 ttcctaccccaaggatcaactcatgaactcattagaccctttaaacaaagttatttctttcataaaaacatctctagatggttaggataaagtccctaca 29172415  T
Q  165 cttatgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacg 264  Q
    |||| |||||||||||||||||||||||||||| |||| ||  |||||||||||| | |  |||||||||||| ||||||||||||||||||||||||||    
T  29172414 cttaggaagaagtttggaagcaattggagtgaataaaattgcatttttaaggttttttggatgacagaatcgtggcacgttggtctcccatcgtggcacg 29172315  T
Q  265 atttttccagcatctctagacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgc 364  Q
    ||||||||||  ||   ||||  | ||||||||||||| ||||||||||||| |||||||||||||| ||||| | |||||||| ||||||||| |||      
T  29172314 atttttccagattcgacagacgacttcagattttcaaccttcacgttttcgcacataaaaatcaaaccgttaacccgttttcgatgccgttttcgcctaa 29172215  T
Q  365 atgttcctgactcttagccctatcataatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgatttcc-aaacctcacataatcccttatttg 462  Q
    | | ||||||| |||||| |||||||||||||||| ||||||||||||||||||||||        ||||||||| ||||||||||||||| ||||||||    
T  29172214 acgctcctgacacttagctctatcataatctacagaaaaattcaagtttcaaccaccc---aaaaatcgatttccaaaacctcacataatcgcttatttg 29172118  T
Q  463 caaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    | ||||||||||||||||||| ||||||| |||||||||||||||||| |||||||    
T  29172117 c-aaaacgtttagacaccgac-tttcaagggaaaatcccaattttcattaacccaa 29172064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 215; E-Value: 1e-117
Query Start/End: Original strand, 84 - 556
Target Start/End: Complemental strand, 37642142 - 37641679
Alignment:
Q  84 ctcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaa 183  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||||    
T  37642142 ctcaacaactcattagaccctttatacaaggttatttctttcctaaaaacatctctagatggttaggataaagtccctacacttaggaagaagtttggaa 37642043  T
Q  184 gcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacga-tttttccagcatctcta 282  Q
    ||| ||||||||||||||| ||  |||||| ||||||| || |||||  ||||| ||||||||||||||||||||| ||||| |||||||||  |    |    
T  37642042 gcatttggagtgaagaaaattgcatttttagggtttctggtatgacatcatcgtggcacgttggtctcccatcgtgacacgattttttccagatttgaca 37641943  T
Q  283 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 382  Q
    |||  | ||||||||||||| |||||||||||||||||||||| ||||| ||||| | |||||||| ||||||||| ||| || | ||||||| ||||||    
T  37641942 gacgacttcagattttcaaccttcacgttttcgctcataaaaaccaaaccgttaacccgttttcgatgccgttttcgcctacacgctcctgacacttagc 37641843  T
Q  383 cctatcataatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgatttcc-aaacctcacataatcccttatttgcaaaaacgtttagacacc 480  Q
     ||||||||||||| || ||||||||||||| ||||||||        ||| ||||| ||||||||||||||| |||||||||| |||||||||||||||    
T  37641842 tctatcataatctatagaaaaattcaagtttaaaccaccc---aaaaatcggtttccaaaacctcacataatcacttatttgcataaacgtttagacacc 37641746  T
Q  481 gacttttcaagcgaaaatcccaattttcatcaacccaatgtaacccaaccccaaaactggttctaatcattgtact 556  Q
    |||| ||||||||||||||||||||||||||||||||         ||||| ||||||||||||||||||||||||    
T  37641745 gactattcaagcgaaaatcccaattttcatcaaccca---------aacccaaaaactggttctaatcattgtact 37641679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 84 - 518
Target Start/End: Complemental strand, 22147403 - 22146971
Alignment:
Q  84 ctcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaa 183  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||||    
T  22147403 ctcaacaactcattagaccctttatacaaggttatttctttcctaaaaacatctctagatggttaggataaagtccctacacttaggaagaagtttggaa 22147304  T
Q  184 gcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgatttttccagcatctctag 283  Q
    ||| ||||||||||| ||| ||  |||||| ||||||| |  ||||| |||||| ||||||||||||||||||||||||||||||||||||  ||   ||    
T  22147303 gcatttggagtgaaggaaattgcatttttagggtttcttggatgacaaaatcgtggcacgttggtctcccatcgtggcacgatttttccagattcgacag 22147204  T
Q  284 acatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagcc 383  Q
    ||  | ||||||||||||| |||||||||||||||||||||| ||||| ||||| | |||||||| ||||||||| |||  | | ||||||| |||||||    
T  22147203 acgacttcagattttcaaccttcacgttttcgctcataaaaaccaaaccgttaacccgttttcgatgccgttttcgcctaaacgctcctgacacttagcc 22147104  T
Q  384 ctatcataatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgatttcc-aaacctcacataatcccttatttgcaaaaacgtttagacaccg 481  Q
    ||||||||||||| || ||||||||||||| ||||||||        ||| ||||| ||||||||||||||| ||||||||| ||||| |||||||||||    
T  22147103 ctatcataatctatagaaaaattcaagtttaaaccaccc---aaaaatcggtttccaaaacctcacataatcacttatttgc-aaaacatttagacaccg 22147008  T
Q  482 acttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    | | ||||||||||||| ||| |||||||||||||||    
T  22147007 aatcttcaagcgaaaattccagttttcatcaacccaa 22146971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 54 - 511
Target Start/End: Complemental strand, 52338626 - 52338171
Alignment:
Q  54 aacaactttctttcctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggata 153  Q
    |||||||| | |||||||||||  |||||||||| |||||||||||||||||||||| |  |||||||||||||||||||||||||||  ||||||||||    
T  52338626 aacaacttccattcctaccccaatgaccaactcatgaactcattagaccctttatactattttatttctttcctaaaaacatctctagatggttaggata 52338527  T
Q  154 aagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctccc 253  Q
     |||||||||||||| ||||||||||||||||||||||||||||||||| ||  |||||||||||||| |  |||||||||||| |||||||||||||||    
T  52338526 tagtccctacacttaggaagaagtttggaagcaattggagtgaagaaaattgcatttttaaggtttcttggatgacagaatcgtggcacgttggtctccc 52338427  T
Q  254 atcgtggcacgatttttccagcatctctagacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccg 353  Q
    |||||||||  ||||||||||  ||   ||||  | ||||||||||||| ||||||||||||| |||||||||||||| ||||| | |||||||| ||||    
T  52338426 atcgtggcattatttttccagattcgacagacgacttcagattttcaaccttcacgttttcgcacataaaaatcaaaccgttaacccgttttcgatgccg 52338327  T
Q  354 ttttcacctgcatgttcctgactcttagccctatcataatctaca-gaaaattcaagtttcaaccacccnnnnnnnntcgatttcc-aaacctcacataa 451  Q
    ||||  |||  |   ||||||| |||||| ||||||||||||||| |||||||||||||| |||| |||        ||||| ||| |||||||||| ||    
T  52338326 tttttgcctaaactctcctgacacttagctctatcataatctacaggaaaattcaagttttaaccgccc---aaaaatcgatctccaaaacctcacacaa 52338230  T
Q  452 tcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatc 511  Q
    || ||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||    
T  52338229 tcacttatttgc-aaaacgtttagacaccgacttttcaaacgaaaatcccaatttccatc 52338171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 84 - 511
Target Start/End: Complemental strand, 24340588 - 24340163
Alignment:
Q  84 ctcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaa 183  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||| ||| |||||  ||||||||||||||||||||||||| ||||||||||||||    
T  24340588 ctcaacaactcattagaccctttatacaacgttatttctttcctaaaagcatttctagatggttaggataaagtccctacacttaggaagaagtttggaa 24340489  T
Q  184 gcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgatttttccagcatctctag 283  Q
    ||| ||||||||||||||| ||  |||||||||||||| || |||||  ||||| ||||||||||||||||||||||||||||||||||||  |     |    
T  24340488 gcatttggagtgaagaaaattgcatttttaaggtttctggtatgacatcatcgtggcacgttggtctcccatcgtggcacgatttttccagatttgacgg 24340389  T
Q  284 acatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagcc 383  Q
    ||  | ||||||||||||| |||||||||| |  |||||||||||||| ||||| | |||||||| ||||||||| ||| || | ||||||| |||||||    
T  24340388 acggcttcagattttcaaccttcacgtttttgaacataaaaatcaaaccgttaacccgttttcgatgccgttttcgcctacacgctcctgacacttagcc 24340289  T
Q  384 ctatcataatctacagaaa-attcaagtttcaaccacccnnnnnnnntcgattt-ccaaacctcacataatcccttatttgcaaaaacgtttagacaccg 481  Q
    ||||||||||||||| ||| |||||||||||||||||||        ||||||| ||||||||||||||||| ||||||||| |||||||||||||||||    
T  24340288 ctatcataatctacaaaaagattcaagtttcaaccaccc---aaaaatcgatttcccaaacctcacataatctcttatttgc-aaaacgtttagacaccg 24340193  T
Q  482 acttttcaagcgaaaatcccaattttcatc 511  Q
    ||| ||||| | ||||||||||||| ||||    
T  24340192 actattcaaacaaaaatcccaatttccatc 24340163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 648 - 855
Target Start/End: Original strand, 6110064 - 6110271
Alignment:
Q  648 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgag 747  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  6110064 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 6110163  T
Q  748 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 847  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  6110164 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 6110263  T
Q  848 ctgatgat 855  Q
    ||||||||    
T  6110264 ctgatgat 6110271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 648 - 855
Target Start/End: Complemental strand, 10572799 - 10572592
Alignment:
Q  648 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgag 747  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  10572799 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 10572700  T
Q  748 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 847  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10572699 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 10572600  T
Q  848 ctgatgat 855  Q
    ||||||||    
T  10572599 ctgatgat 10572592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 650 - 855
Target Start/End: Complemental strand, 16482688 - 16482483
Alignment:
Q  650 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgagac 749  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  16482688 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 16482589  T
Q  750 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 849  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16482588 cccattaaacataaggaaactactctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 16482489  T
Q  850 gatgat 855  Q
    ||||||    
T  16482488 gatgat 16482483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 654 - 855
Target Start/End: Complemental strand, 17781319 - 17781118
Alignment:
Q  654 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgagacccca 753  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  17781319 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 17781220  T
Q  754 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 853  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17781219 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 17781120  T
Q  854 at 855  Q
    ||    
T  17781119 at 17781118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 648 - 855
Target Start/End: Complemental strand, 15601091 - 15600884
Alignment:
Q  648 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgag 747  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  15601091 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 15600992  T
Q  748 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 847  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15600991 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 15600892  T
Q  848 ctgatgat 855  Q
    ||||||||    
T  15600891 ctgatgat 15600884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 648 - 855
Target Start/End: Complemental strand, 15607636 - 15607429
Alignment:
Q  648 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgag 747  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  15607636 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 15607537  T
Q  748 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 847  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15607536 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 15607437  T
Q  848 ctgatgat 855  Q
    ||||||||    
T  15607436 ctgatgat 15607429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 190; E-Value: 1e-102
Query Start/End: Original strand, 650 - 855
Target Start/End: Original strand, 18522665 - 18522870
Alignment:
Q  650 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgagac 749  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  18522665 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 18522764  T
Q  750 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 849  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  18522765 cccattaaacataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcatttaagcatagagactattatgtaggtagact 18522864  T
Q  850 gatgat 855  Q
    ||||||    
T  18522865 gatgat 18522870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 651 - 855
Target Start/End: Original strand, 13211305 - 13211509
Alignment:
Q  651 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgagacc 750  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  13211305 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 13211404  T
Q  751 ccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactg 850  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  13211405 ccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgagatatcattaaagcatagagactattatgtaggtagactg 13211504  T
Q  851 atgat 855  Q
    |||||    
T  13211505 atgat 13211509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 648 - 855
Target Start/End: Original strand, 13248607 - 13248814
Alignment:
Q  648 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgag 747  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  13248607 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 13248706  T
Q  748 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 847  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  13248707 accccattaaacataaggaaactattctcaaagtattcgtagtcaagctttgttgagaagtgggataacattaaagcatagagactattatgtaggtaga 13248806  T
Q  848 ctgatgat 855  Q
    ||||||||    
T  13248807 ctgatgat 13248814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 184; E-Value: 4e-99
Query Start/End: Original strand, 648 - 855
Target Start/End: Complemental strand, 15357793 - 15357586
Alignment:
Q  648 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgag 747  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| ||||    
T  15357793 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagattagttagtccgtttaatggaacattaagtataacttaattgtgag 15357694  T
Q  748 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 847  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15357693 accccattaaacataaggaacctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaaacatagagactattatgtaggtaga 15357594  T
Q  848 ctgatgat 855  Q
    ||||||||    
T  15357593 ctgatgat 15357586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 182; E-Value: 6e-98
Query Start/End: Original strand, 654 - 855
Target Start/End: Complemental strand, 10579556 - 10579355
Alignment:
Q  654 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgagacccca 753  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||    
T  10579556 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgttaaatggaacattaagtataacttaattgtgagacccca 10579457  T
Q  754 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 853  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  10579456 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgagatatcattaaagcatagagactattatgtaggtagactgatg 10579357  T
Q  854 at 855  Q
    ||    
T  10579356 at 10579355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 44 - 511
Target Start/End: Original strand, 12158648 - 12159117
Alignment:
Q  44 tataatcctcaacaactttctttcctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtc 143  Q
    ||||||| | |||||||| | ||||||||||| ||||||||||| |||||||||||||  |||||||||  ||||||| |||||||||| ||||||||      
T  12158648 tataatcattaacaacttccattcctaccccaaggaccaactcatgaactcattagacaatttatacaagattatttccttcctaaaaaaatctctagat 12158747  T
Q  144 ggttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacg 243  Q
    |||||| |||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||  |||||||||||||| || |||||  ||| | |||||    
T  12158748 ggttagaataaagtccctacacttaggaagaagtttggaagcatttggagtgaagaaaattgcatttttaaggtttctggtatgacatcatcatggcacg 12158847  T
Q  244 ttggtctcccatcgtggcacgatttttccagcatctctagacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgtt 343  Q
     || |||||||||||||||||||||||||||  |    ||||  | ||||||||||||| ||||||||||||| |||||||||||||| ||||| | |||    
T  12158848 ctgatctcccatcgtggcacgatttttccagatttgacagacgacttcagattttcaaccttcacgttttcgcgcataaaaatcaaaccgttaacccgtt 12158947  T
Q  344 ttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacag-aaaattcaagtttcaaccaccc--nnnnnnnntcgattt-cca 439  Q
    ||||| ||| ||||| ||| || | | ||||| |||| | |||||||||| ||||| ||||||||||||||||||||||          ||||||| |||    
T  12158948 ttcgatgccattttcgcctacacgct-ctgacacttaactctatcataatttacagaaaaattcaagtttcaaccacccaaaaaaaaaatcgatttccca 12159046  T
Q  440 aacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatc 511  Q
    ||||||| |||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||    
T  12159047 aacctcagataatctcttatttgc-aaaacgtttagacaccgacttttcaaacgaaaatcccaatttccatc 12159117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 650 - 855
Target Start/End: Original strand, 18519980 - 18520182
Alignment:
Q  650 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgagac 749  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  18519980 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 18520079  T
Q  750 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 849  Q
    ||| |||||||||||||||||||||| ||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18520080 cccgttaaacataaggaaactattcttaa---atccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 18520176  T
Q  850 gatgat 855  Q
    ||||||    
T  18520177 gatgat 18520182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 174; E-Value: 4e-93
Query Start/End: Original strand, 654 - 855
Target Start/End: Complemental strand, 19089946 - 19089745
Alignment:
Q  654 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgagacccca 753  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||     
T  19089946 catttctttattgattttgttttgtttcaaaataataaagtccctagattagttagtccgtttaatggaacattaagtataacttaattgtgagacccct 19089847  T
Q  754 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 853  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  19089846 ttaaacataatgaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaatcatagagactattatgtaggtagactgatg 19089747  T
Q  854 at 855  Q
    ||    
T  19089746 at 19089745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 169; E-Value: 3e-90
Query Start/End: Original strand, 648 - 855
Target Start/End: Original strand, 8490488 - 8490702
Alignment:
Q  648 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgag 747  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||    
T  8490488 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 8490587  T
Q  748 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagact-------attatgt 840  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||       |||||||    
T  8490588 accccattaaacataaggaaactattctcaaagtatctgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactacagacgattatgt 8490687  T
Q  841 aggtagactgatgat 855  Q
    |||||||||||||||    
T  8490688 aggtagactgatgat 8490702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 650 - 855
Target Start/End: Complemental strand, 17200389 - 17200184
Alignment:
Q  650 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgagac 749  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||    
T  17200389 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgatac 17200290  T
Q  750 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 849  Q
    ||| |||||||||| ||||||||||| |||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||    
T  17200289 ccctttaaacataatgaaactattcttaaagtatccgtagttaagctttattgagatgtgtgatatcattaaagcatagagactattatgtgggtagact 17200190  T
Q  850 gatgat 855  Q
    ||||||    
T  17200189 gatgat 17200184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 165; E-Value: 9e-88
Query Start/End: Original strand, 667 - 855
Target Start/End: Complemental strand, 15342407 - 15342219
Alignment:
Q  667 attttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgagaccccattaaacataagga 766  Q
    ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  15342407 attttgttttgtttcaaaataataaagtccctagaatagtttgttcgtttaatggaacattaagtataacttaattgtgagaccccattaaacataagga 15342308  T
Q  767 aactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 855  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  15342307 acctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaaacatagagactattatgtaggtagactgatgat 15342219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 19 - 245
Target Start/End: Original strand, 16728642 - 16728868
Alignment:
Q  19 ttaattcaggctctctgaaacacaatataatcctcaacaactttctttcctaccccagggaccaactcaagaactcattagaccctttatacaaagttat 118  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  16728642 ttaattcaggctctctgataaacaatataatcctcaacaactttcttttctaccctaaggaccaactcaagaactcattagaccctttatacaaagttat 16728741  T
Q  119 ttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggtt 218  Q
    ||||||  |||||||||||||||   |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |   |||||||||||    
T  16728742 ttcttttataaaaacatctctagattgttaggataaagtccctacacttaggaagaagtttggaagcaattggagtgaagaaaattccatttttaaggtt 16728841  T
Q  219 tctagtgtgacagaatcgtagcacgtt 245  Q
    |||||||||||||||||||| ||||||    
T  16728842 tctagtgtgacagaatcgtaacacgtt 16728868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 162; E-Value: 5e-86
Query Start/End: Original strand, 650 - 855
Target Start/End: Original strand, 13516813 - 13517018
Alignment:
Q  650 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgagac 749  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||| ||||||    
T  13516813 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttcatggaacattaagtataacttaattgtgagac 13516912  T
Q  750 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 849  Q
    ||| |||||||||||||||| ||||| |||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||    
T  13516913 cccgttaaacataaggaaacgattcttaaagtatctgtagtcaagctttattgagaagtaggatatcattaaagcacagagactattatgtgggtagact 13517012  T
Q  850 gatgat 855  Q
    ||||||    
T  13517013 gatgat 13517018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 654 - 855
Target Start/End: Complemental strand, 32057101 - 32056900
Alignment:
Q  654 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgagacccca 753  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| | |||||||     
T  32057101 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacatcaagtataactttattgtaagaccccg 32057002  T
Q  754 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 853  Q
    |||||||||| ||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||    
T  32057001 ttaaacataaagaaactattcttaaagtgtccgtagtcaaactttattgagaagtgggatatcattaaagcatagagactattatgtgggtagactaatg 32056902  T
Q  854 at 855  Q
    ||    
T  32056901 at 32056900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 150; E-Value: 8e-79
Query Start/End: Original strand, 648 - 809
Target Start/End: Complemental strand, 18640953 - 18640792
Alignment:
Q  648 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgag 747  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||    
T  18640953 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 18640854  T
Q  748 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtg 809  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18640853 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtg 18640792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 142; E-Value: 5e-74
Query Start/End: Original strand, 65 - 274
Target Start/End: Original strand, 14818426 - 14818635
Alignment:
Q  65 ttcctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctaca 164  Q
    |||||||||||  |||||||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||||  |||||||||||||||||||||    
T  14818426 ttcctaccccaaagaccaactcatgaactcattagaccctttatacaaggttatttccttcctaaaaacatctctagatggttaggataaagtccctaca 14818525  T
Q  165 cttatgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacg 264  Q
    |||| |||||||| |||||||| ||||||||||||||| ||| |||||||||||||| |  |||||| ||||| ||||||||||||||||||||||||||    
T  14818526 cttaggaagaagtctggaagcatttggagtgaagaaaattgtatttttaaggtttcttggatgacagcatcgtggcacgttggtctcccatcgtggcacg 14818625  T
Q  265 atttttccag 274  Q
    ||||||||||    
T  14818626 atttttccag 14818635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 654 - 855
Target Start/End: Complemental strand, 1647726 - 1647521
Alignment:
Q  654 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataa----ctttattatgagac 749  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    ||| ||| ||||||    
T  1647726 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataattaacttaattgtgagac 1647627  T
Q  750 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 849  Q
    ||| |||||||||||||||||||| | |||||||||||| |||||||||||||||||  ||||||| |||||||||||||||||||||||| | ||||||    
T  1647626 cccgttaaacataaggaaactatttttaaagtatccgtaatcaagctttattgagaaaagggatataattaaagcatagagactattatgtggatagact 1647527  T
Q  850 gatgat 855  Q
    ||||||    
T  1647526 gatgat 1647521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 54 - 270
Target Start/End: Complemental strand, 52213139 - 52212923
Alignment:
Q  54 aacaactttctttcctaccccagggaccaactcaagaactcattagaccc-tttatacaaagttatttctttcctaaaaacatctctagtcggttaggat 152  Q
    |||||||||| | |||||||||  |||||||||| ||||||||||||||| ||||||||  |||||||| |||||||||||||||||||  |||||||||    
T  52213139 aacaactttcatccctaccccaaagaccaactcatgaactcattagacccctttatacag-gttatttccttcctaaaaacatctctagatggttaggat 52213041  T
Q  153 aaagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctcc 252  Q
    |||||| ||||||||| ||||||||||||||||| ||||||||||||||| ||  |||||||||||||| |  |||||| ||||| ||||||||||||||    
T  52213040 aaagtctctacacttaggaagaagtttggaagcatttggagtgaagaaaattgcatttttaaggtttcttggatgacagcatcgtggcacgttggtctcc 52212941  T
Q  253 catcgtggcacgattttt 270  Q
    ||||||||||||||||||    
T  52212940 catcgtggcacgattttt 52212923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 67 - 274
Target Start/End: Original strand, 20417482 - 20417689
Alignment:
Q  67 cctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacact 166  Q
    |||||||||  |||||||||| ||||| |||| ||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  20417482 cctaccccaaagaccaactcacgaactaattaaaccctttatacaaagatatttctttcctaaaaacatctctagatggttaggataaagtccctacact 20417581  T
Q  167 tatgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgat 266  Q
    || |||||||||| |||||||||||||||||||| | ||  |||||||||||||| |  |||||| ||||| |||||||||||||| || ||| ||||||    
T  20417582 taggaagaagtttagaagcaattggagtgaagaagattgcatttttaaggtttcttggatgacagcatcgtggcacgttggtctccaattgtgacacgat 20417681  T
Q  267 ttttccag 274  Q
    ||||||||    
T  20417682 ttttccag 20417689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 650 - 836
Target Start/End: Original strand, 16200128 - 16200313
Alignment:
Q  650 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgagac 749  Q
    ||||||||||||  ||| |||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||| ||| ||||||    
T  16200128 aaggcatttcttcgttg-ttttattttgtttcaaaataataaagtccttagaatagttagttcgtttaatggaacattatgtataacttaattgtgagac 16200226  T
Q  750 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactatt 836  Q
    ||||||||||||||||| | |||||| ||||||| |||||||||| ||||||| ||||||||||||||||||||||| |||||||||    
T  16200227 cccattaaacataaggacattattcttaaagtattcgtagtcaagatttattgtgaagtgggatatcattaaagcatggagactatt 16200313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 648 - 840
Target Start/End: Original strand, 29924971 - 29925163
Alignment:
Q  648 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgag 747  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||  ||||||||||| || ||| ||||    
T  29924971 acaagacatttctttattgattttgttttgtttcaaaataataaagcccctaaaatagttagtccgtttaatggattattaagtataatttaattgtgag 29925070  T
Q  748 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgt 840  Q
    ||||||||||| ||||||| | |||||| ||| |||  ||||||||||||||||| |||||| |||||||||||||||| ||| |||||||||    
T  29925071 accccattaaatataaggacattattcttaaaatatatgtagtcaagctttattgtgaagtgagatatcattaaagcatggaggctattatgt 29925163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 648 - 840
Target Start/End: Original strand, 29974124 - 29974316
Alignment:
Q  648 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgag 747  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||  ||||||||||| || ||| ||||    
T  29974124 acaagacatttctttattgattttgttttgtttcaaaataataaagcccctaaaatagttagtccgtttaatggattattaagtataatttaattgtgag 29974223  T
Q  748 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgt 840  Q
    ||||||||||| ||||||| | |||||| ||| |||  ||||||||||||||||| |||||| |||||||||||||||| ||| |||||||||    
T  29974224 accccattaaatataaggacattattcttaaaatatatgtagtcaagctttattgtgaagtgagatatcattaaagcatggaggctattatgt 29974316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 54 - 204
Target Start/End: Complemental strand, 23395732 - 23395582
Alignment:
Q  54 aacaactttctttcctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggata 153  Q
    |||||||||| ||| ||||||| | |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||| ||||||    
T  23395732 aacaactttcattcataccccaagaaccaactcaataactcattagaccctctatacaaagttatttctttcctaaaaacatctctagatggtaaggata 23395633  T
Q  154 aagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaat 204  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  23395632 aagtccctacacttaggaagaagtttggaagcaattggagtgaagaaaaat 23395582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 294 - 518
Target Start/End: Original strand, 14818700 - 14818923
Alignment:
Q  294 attttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataat 393  Q
    ||||||||| ||||||||||||| |||||||||||||| |||||||||||||||| ||| ||||||||| |||||||||||| |||||||||||||||||    
T  14818700 attttcaaccttcacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccattttcacctacatgttcctgacacttagccctatcataat 14818799  T
Q  394 ctacagaaa-attcaagtttcaaccacccnnnnnnnntcgattt-ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaag 491  Q
     |||| ||| |||||||||||||||||||        || |||| ||||||||||||||||| ||||||||||||||| ||||||| |||||||||||||    
T  14818800 atacataaagattcaagtttcaaccaccc---caaaatctatttcccaaacctcacataatctcttatttgcaaaaacatttagactccgacttttcaag 14818896  T
Q  492 cgaaaatcccaattttcatcaacccaa 518  Q
    |  |||| ||||||| |||| ||||||    
T  14818897 cataaattccaatttccatcgacccaa 14818923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 54 - 202
Target Start/End: Complemental strand, 17548208 - 17548060
Alignment:
Q  54 aacaactttctttcctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggata 153  Q
    |||||||| | ||||||||||| ||||||||||| ||||||||| ||| |||||||||| ||||||||||||||||||||||||||||  ||||||||||    
T  17548208 aacaacttccattcctaccccaaggaccaactcatgaactcattggacgctttatacaacgttatttctttcctaaaaacatctctagatggttaggata 17548109  T
Q  154 aagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaa 202  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  17548108 aagtccctacacttaggaagaagtttggaagcaattggagtgaagaaaa 17548060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 650 - 836
Target Start/End: Original strand, 16200434 - 16200619
Alignment:
Q  650 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgagac 749  Q
    ||||||||||||  ||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||| ||||||    
T  16200434 aaggcatttcttcgttg-ttttattttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattatgtataacttaattgtgagac 16200532  T
Q  750 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactatt 836  Q
     ||| |||||||||||| | |||||| ||||||| |||||||||| ||||||| |||||||||| ||||||||||||  ||||||||    
T  16200533 tccaataaacataaggacattattcttaaagtattcgtagtcaagatttattgtgaagtgggatgtcattaaagcatgaagactatt 16200619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 233 - 511
Target Start/End: Original strand, 13511620 - 13511899
Alignment:
Q  233 atcgtagcacgttggtctcccatcgtggcacgatttttccagcatctctagacatcatcagattttcaacattcacgttttcgctcataaaaatcaaaca 332  Q
    ||||| |||||||| | |||||||||||||||||||||||||  |    ||||  | ||||||||||||| ||||||||||| | |||||||| |||||     
T  13511620 atcgtggcacgttgttttcccatcgtggcacgatttttccagatttgacagacgacttcagattttcaaccttcacgttttcccgcataaaaaccaaacc 13511719  T
Q  333 gttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacag-aaaattcaagtttcaaccacccnnnnnnnntc 431  Q
    ||||| | |||||||| ||||||||| ||| || | ||||||  |||||| |||||||||||||||| ||||||||||||||||||||||        ||    
T  13511720 gttaacccgttttcgatgccgttttctcctacacgctcctgaaacttagctctatcataatctacagaaaaattcaagtttcaaccacccaaaaaaaatc 13511819  T
Q  432 gattt-ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatc 511  Q
     |||| ||||||||||||| ||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||    
T  13511820 tatttcccaaacctcacattatcgcttatttgc-aaaacgtttagacaccgacttttcaaacgaaaatcccaatttccatc 13511899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 87 - 270
Target Start/End: Original strand, 8604180 - 8604363
Alignment:
Q  87 aagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagca 186  Q
    ||||||||| |||||||||| |||||||||||||||||| ||||| || | ||||  ||||||||||||||||||||||||| ||| |||||||||| ||    
T  8604180 aagaactcactagaccctttttacaaagttatttctttcataaaagcacccctagatggttaggataaagtccctacacttaggaataagtttggaaaca 8604279  T
Q  187 attggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgattttt 270  Q
    ||| || ||||||||| ||  |||||||||||||| || |||||| ||||| ||||||||||||||||||||||||||||||||    
T  8604280 attcgattgaagaaaattgcatttttaaggtttcttgtctgacagcatcgtggcacgttggtctcccatcgtggcacgattttt 8604363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 282 - 421
Target Start/End: Original strand, 8604441 - 8604581
Alignment:
Q  282 agacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 381  Q
    ||||| ||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||| |||||    
T  8604441 agacagcatcagattttcaaccttcacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgttcctgacacttag 8604540  T
Q  382 ccctatcataatctacag-aaaattcaagtttcaaccaccc 421  Q
    |||||||||||| ||||| ||||||||||||||||| ||||    
T  8604541 ccctatcataatgtacagaaaaattcaagtttcaacaaccc 8604581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 67 - 274
Target Start/End: Complemental strand, 13968523 - 13968318
Alignment:
Q  67 cctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacact 166  Q
    ||||||||| |||||| |||| |||||  |||||||||| |||||| ||||| ||||||||||||||||| |||   | |||||||||||||||||||||    
T  13968523 cctaccccaaggacca-ctcatgaacttgttagaccctt-atacaacgttatatctttcctaaaaacatccctatatgtttaggataaagtccctacact 13968426  T
Q  167 tatgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgat 266  Q
    || ||||||||||||||||| ||||||||||||||| ||  |||||| ||||| | |  |||||| ||||| |||||||||| |||||||||||||||||    
T  13968425 taggaagaagtttggaagcatttggagtgaagaaaattgcatttttagggtttattggatgacagcatcgtggcacgttggtatcccatcgtggcacgat 13968326  T
Q  267 ttttccag 274  Q
    ||||||||    
T  13968325 ttttccag 13968318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 67 - 274
Target Start/End: Complemental strand, 13973998 - 13973793
Alignment:
Q  67 cctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacact 166  Q
    ||||||||| |||||| |||| |||||  |||||||||| |||||| ||||| ||||||||||||||||| |||   | |||||||||||||||||||||    
T  13973998 cctaccccaaggacca-ctcatgaacttgttagaccctt-atacaacgttatatctttcctaaaaacatccctatatgtttaggataaagtccctacact 13973901  T
Q  167 tatgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgat 266  Q
    || ||||||||||||||||| ||||||||||||||| ||  |||||| ||||| | |  |||||| ||||| |||||||||| |||||||||||||||||    
T  13973900 taggaagaagtttggaagcatttggagtgaagaaaattgcatttttagggtttattggatgacagcatcgtggcacgttggtatcccatcgtggcacgat 13973801  T
Q  267 ttttccag 274  Q
    ||||||||    
T  13973800 ttttccag 13973793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 283 - 518
Target Start/End: Original strand, 36167135 - 36167369
Alignment:
Q  283 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 382  Q
    |||| ||||||||||||| | ||||||||||||| | |||||||||||| ||||| | |||||||| ||||||||| ||| |  | ||||||| ||||||    
T  36167135 gacagcatcagattttcacccttcacgttttcgcgcctaaaaatcaaaccgttaacccgttttcgatgccgttttcgcctacgcgctcctgacacttagc 36167234  T
Q  383 cctatcataatctacagaaa-attcaagtttcaaccacccnnnnnnnntcgatttcc-aaacctcacataatcccttatttgcaaaaacgtttagacacc 480  Q
     |||||| |||||||||||| |||| ||||||||||||||        ||| ||||| ||||||||||||||| || |||||| ||||| ||||||||||    
T  36167235 tctatcacaatctacagaaagattccagtttcaaccaccc---aaaaatcggtttccaaaacctcacataatcactcatttgccaaaacatttagacacc 36167331  T
Q  481 gacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  36167332 gactcttcaagcgaaaatcccaattttcatcaatccaa 36167369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 79 - 205
Target Start/End: Complemental strand, 11850287 - 11850162
Alignment:
Q  79 accaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtt 178  Q
    |||||||||| ||||| ||||||||||| ||||| ||||||||||||||||||||||||||||   |||||||||||||||||||||||| |||||||||    
T  11850287 accaactcaataactccttagaccctttgtacaa-gttatttctttcctaaaaacatctctagattgttaggataaagtccctacacttaggaagaagtt 11850189  T
Q  179 tggaagcaattggagtgaagaaaaatg 205  Q
    |||||||||||||||||||||||||||    
T  11850188 tggaagcaattggagtgaagaaaaatg 11850162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 282 - 518
Target Start/End: Original strand, 12536255 - 12536491
Alignment:
Q  282 agacatcatcagattttcaacatt-cacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactctta 380  Q
    ||||| ||||||||||||||  || ||||||||| | | |||||  ||||| ||||| | |||||||| | ||||||| ||| || | ||||||| ||||    
T  12536255 agacaacatcagattttcaaattttcacgttttctcgcgtaaaatccaaaccgttaacccgttttcgatgtcgttttcgcctacacgctcctgacactta 12536354  T
Q  381 gccctatcataatctacagaaaa-ttcaagtttcaaccacccnnnnnnnntcgatttcca-aacctcacataatcccttatttgcaaaaacgtttagaca 478  Q
    || |||||||||||||||||||| ||||||||||||||| ||        | | |||||| |||||||||||||| ||||||||||||||||||||||||    
T  12536355 gctctatcataatctacagaaaaattcaagtttcaaccatccaaaaa---ttggtttccagaacctcacataatcacttatttgcaaaaacgtttagaca 12536451  T
Q  479 ccgacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  12536452 ccgacttttcaagcgaaaatcccaattttcatcaagccaa 12536491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 754 - 855
Target Start/End: Original strand, 17136465 - 17136566
Alignment:
Q  754 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 853  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  17136465 ttaaacataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaaacatagagactattatgtgggtagactgatg 17136564  T
Q  854 at 855  Q
    ||    
T  17136565 at 17136566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 68 - 205
Target Start/End: Original strand, 20188070 - 20188207
Alignment:
Q  68 ctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacactt 167  Q
    ||||||||  ||||||| || ||||||||||| |||||||||| | |||||||||| |||||||||||||||||  ||||||||||||||||||||||||    
T  20188070 ctaccccaaagaccaacccatgaactcattagcccctttatacgaggttatttcttacctaaaaacatctctagatggttaggataaagtccctacactt 20188169  T
Q  168 atgaagaagtttggaagcaattggagtgaagaaaaatg 205  Q
    | |||||||||||||||||||||||| |||||||||||    
T  20188170 aggaagaagtttggaagcaattggagcgaagaaaaatg 20188207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 655 - 855
Target Start/End: Complemental strand, 24253589 - 24253388
Alignment:
Q  655 atttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgaga-cccca 753  Q
    ||||||||||||||||||||||  |||||||||||||||||| |||||||| | || ||||| |||||||||||||||| |||| ||  ||||| |||||    
T  24253589 atttctttattgattttgttttacttcaaaataataaagtccttagaatagctcgttcgtttgatggaacattaagtatgacttaatcgtgagatcccca 24253490  T
Q  754 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 853  Q
    | ||||||||||| |||||||| |||||||  || |||||  |||||||  ||||| | || ||||||||||||||||||||||||| |||||||| |||    
T  24253489 tcaaacataaggacactattcttaaagtatatgtggtcaaaatttattgtaaagtgaggtaacattaaagcatagagactattatgtcggtagactaatg 24253390  T
Q  854 at 855  Q
    ||    
T  24253389 at 24253388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 101 - 205
Target Start/End: Complemental strand, 13667713 - 13667609
Alignment:
Q  101 ccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaa 200  Q
    |||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  13667713 ccctttatacaaggttatttctttcctaaaaacatctctagatggttaggataaagtccctacacttaggaagaagtttggaagcaattggagtgaagaa 13667614  T
Q  201 aaatg 205  Q
    |||||    
T  13667613 aaatg 13667609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 282 - 518
Target Start/End: Complemental strand, 34851746 - 34851512
Alignment:
Q  282 agacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 381  Q
    ||||| |||||||||||| |  ||||||||||| | | |||||  ||||| ||||| | |||||||| ||||||||| ||| || | ||||||| |||||    
T  34851746 agacaacatcagattttctaatttcacgttttcacgcgtaaaatccaaaccgttaacccgttttcgatgccgttttcgcctacacgctcctgacacttag 34851647  T
Q  382 ccctatcataatctacagaaaa-ttcaagtttcaaccacccnnnnnnnntcgatttccaaa-cctcacataatcccttatttgcaaaaacgtttagacac 479  Q
    | |||||||||||||||||||| || |||||||||||||||        |||||||||||| |||||||||||| ||||||||||||| |||||| ||||    
T  34851646 ctctatcataatctacagaaaaatttaagtttcaaccacccaaata---tcgatttccaaaacctcacataatcacttatttgcaaaa-cgtttatacac 34851551  T
Q  480 cgacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    ||||| |||||| |||||||||||||||||| |||||||    
T  34851550 cgactcttcaagggaaaatcccaattttcattaacccaa 34851512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 69 - 205
Target Start/End: Complemental strand, 34852004 - 34851868
Alignment:
Q  69 taccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacactta 168  Q
    |||||||  |||||||||| ||||||||||| |  ||||||||| |||||||||| ||||||||||||||| |  |||||||||||||||||||||||||    
T  34852004 taccccaaagaccaactcatgaactcattagccattttatacaaggttatttcttacctaaaaacatctctggatggttaggataaagtccctacactta 34851905  T
Q  169 tgaagaagtttggaagcaattggagtgaagaaaaatg 205  Q
     |||||||||||||||||||||||| |||||||||||    
T  34851904 ggaagaagtttggaagcaattggagcgaagaaaaatg 34851868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 65 - 221
Target Start/End: Original strand, 36166818 - 36166974
Alignment:
Q  65 ttcctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctaca 164  Q
    |||||||||||  |||||||||| |||||||||||||||||||||||| ||||| || |||||||||||||||||||  |||||||||||||| ||||||    
T  36166818 ttcctaccccaaagaccaactcatgaactcattagaccctttatacaaggttatctccttcctaaaaacatctctagatggttaggataaagttcctaca 36166917  T
Q  165 cttatgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggtttct 221  Q
    |||| |||||||| ||||| || ||| ||||||||||| |   ||||||||||||||    
T  36166918 cttaagaagaagtctggaaacatttgaagtgaagaaaattacatttttaaggtttct 36166974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 67 - 202
Target Start/End: Complemental strand, 12271119 - 12270986
Alignment:
Q  67 cctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacact 166  Q
    ||||||||| |||||| |||| ||||||||||||||||| |||||| ||||| |||||||||||||||||||||  || |||||||||||||||||||||    
T  12271119 cctaccccaaggacca-ctcatgaactcattagaccctt-atacaacgttatatctttcctaaaaacatctctatacgtttaggataaagtccctacact 12271022  T
Q  167 tatgaagaagtttggaagcaattggagtgaagaaaa 202  Q
    || ||||||||||||||||| |||||||||||||||    
T  12271021 taggaagaagtttggaagcatttggagtgaagaaaa 12270986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 67 - 202
Target Start/End: Original strand, 14085017 - 14085150
Alignment:
Q  67 cctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacact 166  Q
    ||||||||| |||||| |||| ||||||||||||||||| |||||| ||||| |||||||||||||||||||||  || |||||||||||||||||||||    
T  14085017 cctaccccaaggacca-ctcatgaactcattagaccctt-atacaacgttatatctttcctaaaaacatctctatacgtttaggataaagtccctacact 14085114  T
Q  167 tatgaagaagtttggaagcaattggagtgaagaaaa 202  Q
    || ||||||||||||||||| |||||||||||||||    
T  14085115 taggaagaagtttggaagcatttggagtgaagaaaa 14085150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 67 - 202
Target Start/End: Original strand, 14090418 - 14090551
Alignment:
Q  67 cctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacact 166  Q
    ||||||||| |||||| |||| ||||||||||||||||| |||||| ||||| |||||||||||||||||||||  || |||||||||||||||||||||    
T  14090418 cctaccccaaggacca-ctcatgaactcattagaccctt-atacaacgttatatctttcctaaaaacatctctatacgtttaggataaagtccctacact 14090515  T
Q  167 tatgaagaagtttggaagcaattggagtgaagaaaa 202  Q
    || ||||||||||||||||| |||||||||||||||    
T  14090516 taggaagaagtttggaagcatttggagtgaagaaaa 14090551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 67 - 202
Target Start/End: Original strand, 49399959 - 49400092
Alignment:
Q  67 cctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacact 166  Q
    ||||||||| |||||| |||| ||||||||||||||||| |||||| ||||| |||||||||||||||||||||  || |||||||||||||||||||||    
T  49399959 cctaccccaaggacca-ctcatgaactcattagaccctt-atacaacgttatatctttcctaaaaacatctctatacgtttaggataaagtccctacact 49400056  T
Q  167 tatgaagaagtttggaagcaattggagtgaagaaaa 202  Q
    || ||||||||||||||||| |||||||||||||||    
T  49400057 taggaagaagtttggaagcatttggagtgaagaaaa 49400092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 283 - 518
Target Start/End: Original strand, 10550908 - 10551142
Alignment:
Q  283 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 382  Q
    |||| ||||||||||||| | ||||||||||||| | ||||||| |||| ||||||| |||||||| ||||||||| ||| |  | |||| || ||||||    
T  10550908 gacagcatcagattttcacccttcacgttttcgcgcctaaaaataaaaccgttaatccgttttcgatgccgttttcgcctacgcgctcctaacacttagc 10551007  T
Q  383 cctatcataatctacagaaaat-tcaagtttcaaccacccnnnnnnnntcgatttccaaa-cctcacataatcccttatttgcaaaaacgtttagacacc 480  Q
     |||||| ||| |||| ||||  || ||||||||||||||        ||| |||||||| |||||||||||| || |||||||||||| ||||||||||    
T  10551008 tctatcacaatatacaaaaaaaatccagtttcaaccacccaaaaa---tcggtttccaaaacctcacataatcactcatttgcaaaaacatttagacacc 10551104  T
Q  481 gacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  10551105 gactcttcaagcgaaaatcccaattttcatcaatccaa 10551142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 67 - 202
Target Start/End: Complemental strand, 8582985 - 8582852
Alignment:
Q  67 cctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacact 166  Q
    ||||||||| |||||| |||| ||||||||||||||||| |||||| ||||| |||||||||||||||||||||  || |||||||||| ||||||||||    
T  8582985 cctaccccaaggacca-ctcatgaactcattagaccctt-atacaacgttatatctttcctaaaaacatctctatacgtttaggataaattccctacact 8582888  T
Q  167 tatgaagaagtttggaagcaattggagtgaagaaaa 202  Q
    || ||||||||||||||||| |||||||||||||||    
T  8582887 taggaagaagtttggaagcatttggagtgaagaaaa 8582852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 351 - 518
Target Start/End: Complemental strand, 9511296 - 9511130
Alignment:
Q  351 ccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattcaagtttcaaccacccnnnnnnnntcgatttcc-aaacctcacat 449  Q
    |||||||| ||| || | ||||||| |||||| ||||||||||||||||||| ||||||| ||||||| ||        ||  ||||| |||| ||||||    
T  9511296 ccgttttcgcctacacgctcctgacacttagctctatcataatctacagaaatttcaagtctcaaccatcccaagaa--tcattttcccaaacgtcacat 9511199  T
Q  450 aatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9511198 aatcctttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 9511130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 351 - 518
Target Start/End: Complemental strand, 9519271 - 9519105
Alignment:
Q  351 ccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattcaagtttcaaccacccnnnnnnnntcgatttcc-aaacctcacat 449  Q
    |||||||| ||| || | ||||||| |||||| ||||||||||||||||||| ||||||| ||||||| ||        ||  ||||| |||| ||||||    
T  9519271 ccgttttcgcctacacgctcctgacacttagctctatcataatctacagaaatttcaagtctcaaccatcccaagaa--tcattttcccaaacgtcacat 9519174  T
Q  450 aatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9519173 aatcctttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 9519105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 67 - 202
Target Start/End: Complemental strand, 24122894 - 24122761
Alignment:
Q  67 cctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacact 166  Q
    ||||||||| |||||| |||| ||||||||||||||||| |||||| ||||| |||||||||||||||||||||  || |||||||||| ||||||||||    
T  24122894 cctaccccaaggacca-ctcatgaactcattagaccctt-atacaacgttatatctttcctaaaaacatctctatacgtttaggataaattccctacact 24122797  T
Q  167 tatgaagaagtttggaagcaattggagtgaagaaaa 202  Q
    || ||||||||||||||||| |||||||||||||||    
T  24122796 taggaagaagtttggaagcatttggagtgaagaaaa 24122761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 341 - 511
Target Start/End: Complemental strand, 52212817 - 52212648
Alignment:
Q  341 gttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaa-attcaagtttcaaccacccnnnnnnnntcgattt-cc 438  Q
    |||||||| |||||||||| || |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||        ||||||| ||    
T  52212817 gttttcgatgccgttttcatctacatgttcctgacacttagccctatcataatctacagaaagattcaagtttcaaccaccc---caaaatcgatttccc 52212721  T
Q  439 aaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatc 511  Q
    || |||||||||||| |||||||||||||| ||||| || ||||||||||||||| |||| ||||||| ||||    
T  52212720 aagcctcacataatctcttatttgcaaaaatgtttacactccgacttttcaagcgtaaattccaatttccatc 52212648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 282 - 411
Target Start/End: Complemental strand, 11061824 - 11061694
Alignment:
Q  282 agacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 381  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||||| ||||||||| |||||||||||| ||||||| |||| |||||    
T  11061824 agacagcatcagattttcaacattcacgttttcgcgcataaaaatcaaaccgttaatccgttttcgacaccgttttcacctacatgttcatgacacttag 11061725  T
Q  382 ccctatcataatctacag-aaaattcaagtt 411  Q
    | ||||| |||| ||||| ||||||||||||    
T  11061724 ctctatcttaatgtacagaaaaattcaagtt 11061694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 97 - 271
Target Start/End: Complemental strand, 11062075 - 11061901
Alignment:
Q  97 tagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattggagtga 196  Q
    ||||||||||| |||| |||| ||||||| ||||| || | ||||  |||||||||| |||||||||||||| ||| |||||||||| ||||||||  ||    
T  11062075 tagaccctttacacaaggttaattctttcataaaagcacccctagatggttaggatagagtccctacacttaggaataagtttggaaacaattggatcga 11061976  T
Q  197 agaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgatttttc 271  Q
    |||||| ||  |||||||||||||||||   |||  ||||| |||||||||||||||||||||||||||||||||    
T  11061975 agaaaattgcatttttaaggtttctagtaaaacaacatcgtggcacgttggtctcccatcgtggcacgatttttc 11061901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 108 - 274
Target Start/End: Complemental strand, 13327428 - 13327262
Alignment:
Q  108 tacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatgtc 207  Q
    ||||||| ||||||||||  ||||| ||| ||||  ||||| ||||||||| ||||||||| |||||||||||||| ||||| ||| |||||||| ||      
T  13327428 tacaaagctatttctttcacaaaaatatccctagatggttaagataaagtctctacacttaggaagaagtttggaaacaatttgagcgaagaaaattgca 13327329  T
Q  208 tttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgatttttccag 274  Q
    |||||||||||| | || | |||| ||||| ||||||||||||||||||||||||||||||||||||    
T  13327328 tttttaaggttttttgtctaacagcatcgtggcacgttggtctcccatcgtggcacgatttttccag 13327262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 101 - 274
Target Start/End: Original strand, 53770225 - 53770398
Alignment:
Q  101 ccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaa 200  Q
    ||||| |||||||| |||||||| | |||||||||| ||||  | ||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||    
T  53770225 cccttaatacaaagctatttcttccataaaaacatccctagatgattaggataaagtccctacacttaggaagaagtttggaaccaattggagcgaagaa 53770324  T
Q  201 aaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgatttttccag 274  Q
    || ||  ||||| |||||| | ||   |||| ||||| |||||||||| |||||||||||||| ||||||||||    
T  53770325 aattgcatttttgaggtttttggtcaaacagcatcgtggcacgttggtttcccatcgtggcacaatttttccag 53770398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 65 - 221
Target Start/End: Original strand, 21618669 - 21618825
Alignment:
Q  65 ttcctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctaca 164  Q
    |||||||||||  |||||||||| |||||||||||||||||||||||| ||||| || |||||||||||||||||||  ||||| |||||||| ||||||    
T  21618669 ttcctaccccaaagaccaactcatgaactcattagaccctttatacaaggttatctccttcctaaaaacatctctagatggttaagataaagttcctaca 21618768  T
Q  165 cttatgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggtttct 221  Q
    |||| |||||||| || || || ||| ||||||||||| |   ||||||||||||||    
T  21618769 cttaagaagaagtctgaaaacatttgaagtgaagaaaattacatttttaaggtttct 21618825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 283 - 518
Target Start/End: Original strand, 21618986 - 21619220
Alignment:
Q  283 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 382  Q
    |||| ||||||||||||| | ||||||||||||| | |||||||||||| ||||| | |||||||| ||||||||| ||| |  | ||||||| |||| |    
T  21618986 gacagcatcagattttcacccttcacgttttcgcgcctaaaaatcaaaccgttaacccgttttcgatgccgttttcgcctacgcgctcctgacacttaac 21619085  T
Q  383 cctatcataatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgatttcc-aaacctcacataatcccttatttgcaaaaacgtttagacacc 480  Q
     |||||| ||||||||| ||||||  ||||||||||||||        ||| ||||| |||||||||||||||||| |||||| ||||| ||||||||||    
T  21619086 tctatcacaatctacagaaaaattacagtttcaaccaccc---aaaaatcggtttccaaaacctcacataatccctcatttgccaaaacatttagacacc 21619182  T
Q  481 gacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    | || ||||||| |||||| ||||||||||||| ||||    
T  21619183 gtctcttcaagcaaaaatctcaattttcatcaatccaa 21619220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 439 - 558
Target Start/End: Original strand, 37038808 - 37038917
Alignment:
Q  439 aaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaatgtaacccaaccccaaaact 538  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||          ||| |||||||||||||    
T  37038808 aaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatctcaattttcatc----------aactcaaccccaaaact 37038897  T
Q  539 ggttctaatcattgtactgt 558  Q
    ||||||||||||||||||||    
T  37038898 ggttctaatcattgtactgt 37038917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 54 - 221
Target Start/End: Original strand, 10550659 - 10550825
Alignment:
Q  54 aacaactttctttcctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggata 153  Q
    |||||||| | |||||| |||| ||||||||||| ||||||||| |||||||||||||| ||||| || ||||||||| ||| |||||  ||||||||||    
T  10550659 aacaacttccattcctatcccaaggaccaactcatgaactcattggaccctttatacaacgttatctccttcctaaaa-catttctagatggttaggata 10550757  T
Q  154 aagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggtttct 221  Q
    |||| | |||||||| |||||||| ||||| || ||||||||||||||| ||  ||||||||||||||    
T  10550758 aagttcatacacttaagaagaagtctggaaacatttggagtgaagaaaattgcatttttaaggtttct 10550825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 282 - 518
Target Start/End: Complemental strand, 17547915 - 17547681
Alignment:
Q  282 agacatcatcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactctta 380  Q
    ||||| |||||||||||| ||  ||||||||||||| | |||||  ||||| ||||| |  ||||||| | ||||||| ||| || | ||||||| ||||    
T  17547915 agacaacatcagattttctaattttcacgttttcgcgcgtaaaatccaaaccgttaacccattttcgatgtcgttttcgcctacacgctcctgacactta 17547816  T
Q  381 gccctatcataatctacagaaaa-ttcaagtttcaaccacccnnnnnnnntcgatttccaaa-cctcacataatcccttatttgcaaaaacgtttagaca 478  Q
    ||| |||||| |||||||||||| ||||||||||||||||||        |||||||||||| |||||||||||| ||||||||||||  ||||||||||    
T  17547815 gccttatcattatctacagaaaaattcaagtttcaaccacccaaaaa---tcgatttccaaaacctcacataatcgcttatttgcaaa--cgtttagaca 17547721  T
Q  479 ccgacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    | ||||||||||| |||||||||||||| ||| |||||||    
T  17547720 ctgacttttcaagggaaaatcccaatttccattaacccaa 17547681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 108 - 274
Target Start/End: Complemental strand, 51962024 - 51961858
Alignment:
Q  108 tacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatgtc 207  Q
    ||||||| ||| |||| | |||||||||| ||||  | ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| ||      
T  51962024 tacaaagctatctcttccataaaaacatccctagatgattaggataaagtccctacacttaggaagaagtttggaagcaattggagcgaagaaaattgca 51961925  T
Q  208 tttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgatttttccag 274  Q
    ||||| |||||| | ||   |||  ||||| |||||||||| |||||||||||||||||||||||||    
T  51961924 tttttgaggtttttggtcaaacaacatcgtggcacgttggtttcccatcgtggcacgatttttccag 51961858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 101 - 274
Target Start/End: Original strand, 16260646 - 16260819
Alignment:
Q  101 ccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaa 200  Q
    ||||| |||| ||| |||||||| | |||||||||| ||||  | ||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||    
T  16260646 cccttaatacgaagctatttcttccataaaaacatccctagatgattaggataaagtccctacacttaggaagaagtttggaaccaattggagcgaagaa 16260745  T
Q  201 aaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgatttttccag 274  Q
    || ||  ||||| |||||| | ||   |||| ||||| |||||||||| || ||||||||||||||||||||||    
T  16260746 aattgcatttttgaggtttttggtcaaacagcatcgtggcacgttggtttctcatcgtggcacgatttttccag 16260819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 281 - 421
Target Start/End: Original strand, 17100083 - 17100224
Alignment:
Q  281 tagacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactctta 380  Q
    |||||| ||||||||||||||| ||||||||||||| |||||||||||| | ||||||| |||||||| ||||||||||||| | ||||| |||| ||||    
T  17100083 tagacaacatcagattttcaaccttcacgttttcgcgcataaaaatcaatccgttaatccgttttcgatgccgttttcacctacgtgttcatgacactta 17100182  T
Q  381 gccctatcataatctacag-aaaattcaagtttcaaccaccc 421  Q
    || ||||| |||| ||||| ||||||||||||||||| ||||    
T  17100183 gctctatcttaatgtacagaaaaattcaagtttcaacaaccc 17100224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 288 - 421
Target Start/End: Complemental strand, 11882860 - 11882726
Alignment:
Q  288 catcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctat 387  Q
    ||||| ||||||||| ||||||||||||| |||||||||||||| |||||||||||||| | ||||||||||||| | |||||||||| |||| ||||||    
T  11882860 catcatattttcaaccttcacgttttcgcgcataaaaatcaaaccgttaatctgttttcaatgccgttttcacctacttgttcctgacacttacccctat 11882761  T
Q  388 cataatctacag-aaaattcaagtttcaaccaccc 421  Q
    ||||||  |||| ||||||||||||| ||| ||||    
T  11882760 cataatgcacagaaaaattcaagttttaacaaccc 11882726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 116 - 270
Target Start/End: Complemental strand, 11883097 - 11882944
Alignment:
Q  116 tatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaag 215  Q
    |||||||||| | |||| ||| ||||  ||||| ||||||||||||||||||| |||||||||||||| ||||| ||| |||||||| ||  ||||||||    
T  11883097 tatttctttcatgaaaagatccctagatggttaagataaagtccctacacttaggaagaagtttggaaacaatttgagcgaagaaaattgcatttttaag 11882998  T
Q  216 gtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgattttt 270  Q
    |||| | || | |||| ||||| ||||||||||||||||||||||||||||||||    
T  11882997 gttt-ttgtctaacagcatcgtggcacgttggtctcccatcgtggcacgattttt 11882944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 282 - 508
Target Start/End: Original strand, 20188329 - 20188554
Alignment:
Q  282 agacatcatcagattttc--aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactctt 379  Q
    ||||| ||||||||||||  ||  ||||||||||||| | |||||  |||||  |||| | |||||||| ||||||||| ||| |  ||||||||| |||    
T  20188329 agacaacatcagattttcctaattttcacgttttcgcgcgtaaaatccaaaccattaacccgttttcgatgccgttttcgcctacgcgttcctgacactt 20188428  T
Q  380 agccctatcataatctacagaaaa-ttcaagttt-caaccacccnnnnnnnntcgatttcca-aacctcacataatcccttatttgcaaaaacgtttaga 476  Q
    ||| |||||||||||||||||||| ||||||||| |||||||||        |||||||||| ||||||||||| ||   | ||||||||||||||||||    
T  20188429 agctctatcataatctacagaaaaattcaagttttcaaccaccccaaac---tcgatttccagaacctcacatactc---tgtttgcaaaaacgtttaga 20188522  T
Q  477 caccgacttttcaagcgaaaatcccaattttc 508  Q
    |||||| |||||||||||||||||||||||||    
T  20188523 caccgagttttcaagcgaaaatcccaattttc 20188554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 282 - 499
Target Start/End: Original strand, 15517257 - 15517473
Alignment:
Q  282 agacatcatcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactctta 380  Q
    ||||| |||||||||||| ||  ||||||||||||| | |||||  ||||| ||||| | ||||| || ||||||||| ||| || | |||| |||||||    
T  15517257 agacaacatcagattttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgtttttgatgccgttttcgcctacacgctcctaactctta 15517356  T
Q  381 gccctatcataatctacag-aaaattcaagtttcaaccacccnnnnnnnntcga-tttccaaacctcacataatcccttatttgcaaaaacgtttagaca 478  Q
    || |||||||||||||||| ||||||||||||||||| ||||        || | |||| ||||||||||||||| ||||||||| ||||||||||||||    
T  15517357 gctctatcataatctacagaaaaattcaagtttcaactaccc---aaaaatcaattttcaaaacctcacataatcacttatttgc-aaaacgtttagaca 15517452  T
Q  479 ccgacttttcaagcgaaaatc 499  Q
    | |||||||||||||||||||    
T  15517453 ctgacttttcaagcgaaaatc 15517473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 81 - 223
Target Start/End: Original strand, 3991633 - 3991775
Alignment:
Q  81 caactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttg 180  Q
    |||| ||||||||||||||||||||||||||| ||||| |||||| |||||||| | ||||  | ||||||||||||||||||||||| ||| |||||||    
T  3991633 caacacaagaactcattagaccctttatacaaggttatctctttcataaaaacacccctagatgattaggataaagtccctacacttaagaataagtttg 3991732  T
Q  181 gaagcaattggagtgaagaaaaatgtctttttaaggtttctag 223  Q
    ||| ||||||||   ||||||| |   ||||||||||||||||    
T  3991733 gaaacaattggatcaaagaaaattacatttttaaggtttctag 3991775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 437 - 518
Target Start/End: Complemental strand, 19568503 - 19568421
Alignment:
Q  437 ccaaacctcacataatcccttattt-gcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    |||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19568503 ccaaacctcggataatcccttattttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 19568421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 288 - 393
Target Start/End: Complemental strand, 13327182 - 13327077
Alignment:
Q  288 catcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctat 387  Q
    ||||| ||||||||| ||||||||||||| |||||||||||||| ||||| |||||||||| ||||||||||||| | |||||||||| ||||| |||||    
T  13327182 catcaaattttcaaccttcacgttttcgcacataaaaatcaaaccgttaaactgttttcgatgccgttttcacctacttgttcctgacacttagacctat 13327083  T
Q  388 cataat 393  Q
    ||||||    
T  13327082 cataat 13327077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 438 - 514
Target Start/End: Complemental strand, 42324265 - 42324189
Alignment:
Q  438 caaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaac 514  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  42324265 caaacctcacataattccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatctcaatcttcatcaac 42324189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 282 - 384
Target Start/End: Original strand, 20417763 - 20417864
Alignment:
Q  282 agacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 381  Q
    ||||| |||||||||| |||| ||||||||||||| |||||||||||||| |||||||| ||||||| ||||||||||||| |||||||||||| |||||    
T  20417763 agacaacatcagattt-caaccttcacgttttcgcgcataaaaatcaaactgttaatctattttcgatgccgttttcacctacatgttcctgacacttag 20417861  T
Q  382 ccc 384  Q
    |||    
T  20417862 ccc 20417864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 282 - 507
Target Start/End: Complemental strand, 11850040 - 11849818
Alignment:
Q  282 agacatcatcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactctta 380  Q
    ||||| |||||||||||| ||  ||||||||||||| | ||| |  ||||| ||||| | ||||||||  |||||||| ||| |  | | ||||| ||||    
T  11850040 agacaacatcagattttctaattttcacgttttcgcgcgtaagatccaaaccgttaacccgttttcgataccgttttcgcctacgcgcttctgacactta 11849941  T
Q  381 gccctatcataatctacagaaaa-ttcaagtttcaaccacccnnnnnnnntcgatttcca-aacctcacataatcccttatttgcaaaaacgtttagaca 478  Q
    || |||||||||||||||||||| ||||||||||||||||||        |||||||||| |||||| |||| ||   | ||||||||||||||||||||    
T  11849940 gctctatcataatctacagaaaaattcaagtttcaaccacccaaaac---tcgatttccagaacctcgcatactc---tgtttgcaaaaacgtttagaca 11849847  T
Q  479 ccgacttttcaagcgaaaatcccaatttt 507  Q
    |||| ||||||||||||||||||||||||    
T  11849846 ccgagttttcaagcgaaaatcccaatttt 11849818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 308 - 415
Target Start/End: Original strand, 2843651 - 2843758
Alignment:
Q  308 cgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattca 407  Q
    ||||||||| ||||||||||||||  |||||| |||||||| ||||||||||||| | ||||| |||| |||| ||||||| |||| |||||||||||||    
T  2843651 cgttttcgcgcataaaaatcaaaccattaatccgttttcgatgccgttttcacctacgtgttcatgacacttaaccctatcttaatgtacagaaaattca 2843750  T
Q  408 agtttcaa 415  Q
    ||||||||    
T  2843751 agtttcaa 2843758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 81 - 224
Target Start/End: Original strand, 15517011 - 15517154
Alignment:
Q  81 caactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttg 180  Q
    |||| ||||||| |||||||||| ||||||||||||||||||||| |||||||| ||||||  | |||||||||||||||||||||||  || || ||||    
T  15517011 caacgcaagaacacattagaccccttatacaaagttatttctttcataaaaacacctctagatgattaggataaagtccctacacttagaaataactttg 15517110  T
Q  181 gaagcaattggagtgaagaaaaatgtctttttaaggtttctagt 224  Q
     || ||||| |  ||||||||||||  |||| || |||||||||    
T  15517111 aaaacaatttggttgaagaaaaatgcattttaaaagtttctagt 15517154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 352 - 508
Target Start/End: Complemental strand, 13667460 - 13667306
Alignment:
Q  352 cgttttcacctgcatgttcctgactcttagccctatcataatctacagaaa-attcaagtttcaaccacccnnnnnnnntcgatttcc-aaacctcacat 449  Q
    ||||||| ||| || | ||||||| |||| | ||||||||||||||||||| | ||||||||||||||||         ||||||||| ||||||| |||    
T  13667460 cgttttcgcctacacgctcctgacacttaactctatcataatctacagaaagactcaagtttcaaccacc---taaaaatcgatttcccaaacctcgcat 13667364  T
Q  450 aatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttc 508  Q
    |||| ||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  13667363 aatctcttatttgcaaaa-cgtttagacaccgagttttcaagcgaaaatcccaattttc 13667306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 81 - 274
Target Start/End: Original strand, 17099816 - 17100010
Alignment:
Q  81 caactcaagaactcattagaccc-tttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagttt 179  Q
    |||| |||| ||||| ||||||| |||| |||| |||| ||||||| |||||||| |  |||  | ||||||||||||||||| ||||| ||| ||||||    
T  17099816 caacacaaggactcactagacccctttacacaaggttaattctttcataaaaacacccttagatgattaggataaagtccctatacttaggaataagttt 17099915  T
Q  180 ggaagcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgatttttccag 274  Q
    |||| ||||||||   ||||||| ||  |||||||||||| |||    |||| ||||| |||||||||| ||||||||||||| |||||||||||    
T  17099916 ggaaacaattggatcaaagaaaattgcatttttaaggtttttagaaaaacagcatcgtggcacgttggtttcccatcgtggcatgatttttccag 17100010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 650 - 712
Target Start/End: Original strand, 18534758 - 18534820
Alignment:
Q  650 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtcc 712  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  18534758 aaggcatttctttattgattttgttttgtttcaaaataataaagtccatagaatagttagtcc 18534820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 101 - 223
Target Start/End: Original strand, 18910254 - 18910376
Alignment:
Q  101 ccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaa 200  Q
    ||||| |||||||| |||||||| | |||||||||| ||||  | ||||||||||||||||||||||| ||||||||||||||| |||||||   |||||    
T  18910254 cccttaatacaaagctatttcttccataaaaacatccctagatgattaggataaagtccctacacttaggaagaagtttggaagtaattggatcaaagaa 18910353  T
Q  201 aaatgtctttttaaggtttctag 223  Q
    || ||  ||||||||||||||||    
T  18910354 aattgcatttttaaggtttctag 18910376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 282 - 403
Target Start/End: Complemental strand, 51961784 - 51961663
Alignment:
Q  282 agacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 381  Q
    ||||| ||||||||||||||| |  |||||||||| |||||||||||||| ||||||| ||||||||||||||||||||   |||| |||| |||||||     
T  51961784 agacaacatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatccgttttcgacgccgttttcactcacatgctcctaactcttaa 51961685  T
Q  382 ccctatcataatctacagaaaa 403  Q
    | ||||||||||  ||||||||    
T  51961684 cactatcataatgcacagaaaa 51961663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 282 - 403
Target Start/End: Original strand, 53770472 - 53770593
Alignment:
Q  282 agacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 381  Q
    ||||| ||||||||||||||| |  |||||||||| |||||||||||||| ||||||| |||||||| ||||||||| ||| |||| |||| || |||||    
T  53770472 agacaacatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcgcctacatgctcctaacacttag 53770571  T
Q  382 ccctatcataatctacagaaaa 403  Q
    | ||||||||||  ||||||||    
T  53770572 cactatcataatgcacagaaaa 53770593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 282 - 416
Target Start/End: Original strand, 23491805 - 23491941
Alignment:
Q  282 agacatcatcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactctta 380  Q
    ||||| |||||||||||| ||  ||||||||||||| | |||||| ||||| ||||||| |||||||  ||||||||||||| | ||||| |||| ||||    
T  23491805 agacaacatcagattttccaattttcacgttttcgcgcgtaaaaaccaaaccgttaatccgttttcggtgccgttttcacctacttgttcatgacactta 23491904  T
Q  381 gccctatcataatctacag-aaaattcaagtttcaac 416  Q
    |||||||| |||| ||||| |||||||||||||||||    
T  23491905 gccctatcttaatgtacagaaaaattcaagtttcaac 23491941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 282 - 421
Target Start/End: Original strand, 54423444 - 54423584
Alignment:
Q  282 agacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 381  Q
    ||||| || |||||||||||| ||||| ||||||| |||||||||| ||  ||||||| |||||||| | ||||||||||| | ||||| |||| |||||    
T  54423444 agacaacaccagattttcaaccttcacattttcgcgcataaaaatcgaattgttaatccgttttcgatgtcgttttcacctacgtgttcatgacacttag 54423543  T
Q  382 ccctatcataatctacag-aaaattcaagtttcaaccaccc 421  Q
    |||||||  ||| ||||| ||||||||||||||||| ||||    
T  54423544 ccctatctgaatgtacagaaaaattcaagtttcaacaaccc 54423584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 553 - 612
Target Start/End: Original strand, 8490393 - 8490452
Alignment:
Q  553 tactgtttgaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8490393 tactgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 8490452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 307 - 418
Target Start/End: Original strand, 18910610 - 18910721
Alignment:
Q  307 acgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattc 406  Q
    |||||||||| |||||||||||||| ||||||| |||||||| ||||||||| ||| |||| |||| || ||| || ||||||||||||||| ||| |||    
T  18910610 acgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcgcctacatgctcctaacacttggcactatcataatctacaaaaatttc 18910709  T
Q  407 aagtttcaacca 418  Q
    | ||||||||||    
T  18910710 atgtttcaacca 18910721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 437 - 518
Target Start/End: Original strand, 17513588 - 17513668
Alignment:
Q  437 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    ||||| |||||||| || ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  17513588 ccaaaactcacatagtctcttatttgcaaaa-cgtttagacaccgacttttcaagggaaaatcccaattttcattaacccaa 17513668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 282 - 421
Target Start/End: Complemental strand, 23395461 - 23395320
Alignment:
Q  282 agacatcatcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactctta 380  Q
    ||||| |||||||||||| ||  ||||||||||||| | |||||  ||||| ||||| | |||||||| ||||||||| ||| || | ||||||| ||||    
T  23395461 agacaacatcagattttctaattttcacgttttcgcgcgtaaaatccaaactgttaacccgttttcgatgccgttttcgcctacacgctcctgacactta 23395362  T
Q  381 gccctatcataatctacagaaa-attcaagtttcaaccaccc 421  Q
    || ||||||||||||||| ||| |||||||||||||||||||    
T  23395361 gctctatcataatctacaaaaagattcaagtttcaaccaccc 23395320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 556 - 612
Target Start/End: Original strand, 6109972 - 6110028
Alignment:
Q  556 tgtttgaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6109972 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 6110028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 556 - 612
Target Start/End: Original strand, 13248515 - 13248571
Alignment:
Q  556 tgtttgaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13248515 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 13248571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 282 - 416
Target Start/End: Original strand, 38167342 - 38167478
Alignment:
Q  282 agacatcatcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactctta 380  Q
    ||||| |||||||||||| ||  ||||||||||||| | |||||| ||||| ||||| | |||||||| ||||||||||||| ||   ||||||| ||||    
T  38167342 agacaacatcagattttccaattttcacgttttcgcgcgtaaaaaccaaaccgttaacccgttttcgatgccgttttcacctacacactcctgacactta 38167441  T
Q  381 gccctatcataatctacag-aaaattcaagtttcaac 416  Q
    |||||||| |||| ||||| |||||||||||||||||    
T  38167442 gccctatcttaatgtacagaaaaattcaagtttcaac 38167478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 282 - 403
Target Start/End: Original strand, 16260893 - 16261014
Alignment:
Q  282 agacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 381  Q
    ||||| ||||||||||||||| |  |||||||||| |||||||||||||  ||||||| |||||||| ||| ||||||||| |||| |||| ||  ||||    
T  16260893 agacaacatcagattttcaacttctacgttttcgcgcataaaaatcaaatcgttaatccgttttcgatgccattttcacctacatgctcctaacaattag 16260992  T
Q  382 ccctatcataatctacagaaaa 403  Q
    | ||||||||||  ||||||||    
T  16260993 cactatcataatgcacagaaaa 16261014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 555 - 612
Target Start/End: Complemental strand, 18641046 - 18640989
Alignment:
Q  555 ctgtttgaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  18641046 ctgttggaataagccctaatagccaatctatattgattgtgtttggctttgtatcatg 18640989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 556 - 612
Target Start/End: Original strand, 13211211 - 13211267
Alignment:
Q  556 tgtttgaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  13211211 tgttggaataagccctaatagccaatctatattgattgggtttggttttgtatcatg 13211267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 91 - 271
Target Start/End: Original strand, 54423187 - 54423367
Alignment:
Q  91 actcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattg 190  Q
    ||||| ||||||||||  |||| |||| ||||||| |||||||| |  |||  | ||||||||||||||||| |||||  || ||||||||||  |||||    
T  54423187 actcactagaccctttccacaaggttaattctttcataaaaacacccatagatgattaggataaagtccctatacttagaaataagtttggaaagaattg 54423286  T
Q  191 gagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgatttttc 271  Q
    ||   ||||||| ||  |||||||||||| |||   |||||  |||| |||||||||| |||||||||| |||||||||||    
T  54423287 gatcaaagaaaattgcatttttaaggtttttagaaagacagcttcgtggcacgttggtttcccatcgtgacacgatttttc 54423367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #107
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 553 - 612
Target Start/End: Complemental strand, 16482785 - 16482727
Alignment:
Q  553 tactgtttgaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  16482785 tactgttagaataagccctaata-ccaatctatattgattgggtttggctttgtatcatg 16482727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #108
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 437 - 518
Target Start/End: Complemental strand, 3394045 - 3393964
Alignment:
Q  437 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    ||||||||||||||||| ||| ||||||||||||||||||| | ||||||||||||  |||| ||||||| |||| ||||||    
T  3394045 ccaaacctcacataatctcttgtttgcaaaaacgtttagactctgacttttcaagcataaattccaatttccatcgacccaa 3393964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #109
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 553 - 606
Target Start/End: Complemental strand, 10579656 - 10579603
Alignment:
Q  553 tactgtttgaataagccctaatagccaatctatattgattgggtttggctttgt 606  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  10579656 tactgttggaataagccctaatagccaatctatattgattgggtttgactttgt 10579603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #110
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 650 - 695
Target Start/End: Original strand, 18510924 - 18510969
Alignment:
Q  650 aaggcatttctttattgattttgttttgtttcaaaataataaagtc 695  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  18510924 aaggcatttctttattgattttgttttgtttcaaaataataaagtc 18510969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #111
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 564 - 612
Target Start/End: Original strand, 17136145 - 17136193
Alignment:
Q  564 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  17136145 taagccctaatagccaatctatattgattgagtttggctttgtatcatg 17136193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #112
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 437 - 490
Target Start/End: Complemental strand, 178773 - 178720
Alignment:
Q  437 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaa 490  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||| |||||    
T  178773 ccaaacctcacataatctcttatttgcaaaaacgtttagactccgactcttcaa 178720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #113
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 556 - 612
Target Start/End: Complemental strand, 15607729 - 15607672
Alignment:
Q  556 tgtttgaataagccctaatagccaatctata-ttgattgggtttggctttgtatcatg 612  Q
    |||| |||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  15607729 tgttggaataagccctaatagccaatctatattttattgggtttggctttgtatcatg 15607672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #114
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 297 - 416
Target Start/End: Original strand, 3991999 - 3992119
Alignment:
Q  297 ttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatcta 396  Q
    |||||| ||||| ||||||| ||||| |||||||| ||||||| |||| ||| ||||||||||||| | | ||| |||| ||||||||||||  | | ||    
T  3991999 ttcaactttcacattttcgcgcataataatcaaaccgttaatccgtttccgatgccgttttcacctacgttttcatgacacttagccctatctcagtgta 3992098  T
Q  397 cag-aaaattcaagtttcaac 416  Q
     || |||||||||||||||||    
T  3992099 aagaaaaattcaagtttcaac 3992119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #115
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 81 - 202
Target Start/End: Original strand, 12535988 - 12536111
Alignment:
Q  81 caactcaagaactcattagaccctttatacaaagtta--tttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtt 178  Q
    |||| |||| |||||||||||||||||||||||||||  ||| |||| |||||||| | ||||  | ||||||| ||||||||||||||   || |||||    
T  12535988 caacacaaggactcattagaccctttatacaaagttatttttttttcataaaaacacccctagatgattaggatgaagtccctacacttggaaataagtt 12536087  T
Q  179 tggaagcaattggagtgaagaaaa 202  Q
    ||||| ||||| |  |||||||||    
T  12536088 tggaaacaatttggttgaagaaaa 12536111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #116
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 556 - 612
Target Start/End: Complemental strand, 15351293 - 15351237
Alignment:
Q  556 tgtttgaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    |||| |||||||||||||||||||||||||| ||||||  |||||||||||||||||    
T  15351293 tgttggaataagccctaatagccaatctataatgattgattttggctttgtatcatg 15351237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #117
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 556 - 612
Target Start/End: Complemental strand, 15357885 - 15357829
Alignment:
Q  556 tgtttgaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    |||| |||||||||||||||||||||||||| ||||||  |||||||||||||||||    
T  15357885 tgttggaataagccctaatagccaatctataatgattgattttggctttgtatcatg 15357829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #118
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 564 - 612
Target Start/End: Complemental strand, 17200475 - 17200427
Alignment:
Q  564 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  17200475 taagccctaatagccaatctatgttgattgggtttggctttgtagcatg 17200427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #119
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 564 - 612
Target Start/End: Original strand, 18519893 - 18519941
Alignment:
Q  564 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||||    
T  18519893 taagtcctaatagccaatctatattgattgggtttggttttgtatcatg 18519941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #120
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 556 - 606
Target Start/End: Complemental strand, 10572890 - 10572840
Alignment:
Q  556 tgtttgaataagccctaatagccaatctatattgattgggtttggctttgt 606  Q
    |||| |||||||||||||||||||| |||||||||||||||||| ||||||    
T  10572890 tgttggaataagccctaatagccaacctatattgattgggtttgactttgt 10572840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #121
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 282 - 403
Target Start/End: Complemental strand, 13968244 - 13968123
Alignment:
Q  282 agacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 381  Q
    ||||| |||||||||||| || ||||||||||||| | |||||| | ||| ||||| | |||||||| ||||||||| ||| || | || |||  | |||    
T  13968244 agacagcatcagattttcgaccttcacgttttcgcgcgtaaaaacccaaccgttaacccgttttcgatgccgttttcgcctacacgctcatgagacatag 13968145  T
Q  382 ccctatcataatctacagaaaa 403  Q
    | |||||||||||||| |||||    
T  13968144 ctctatcataatctaccgaaaa 13968123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #122
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 282 - 403
Target Start/End: Complemental strand, 13973719 - 13973598
Alignment:
Q  282 agacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 381  Q
    ||||| |||||||||||| || ||||||||||||| | |||||| | ||| ||||| | |||||||| ||||||||| ||| || | || |||  | |||    
T  13973719 agacagcatcagattttcgaccttcacgttttcgcgcgtaaaaacccaaccgttaacccgttttcgatgccgttttcgcctacacgctcatgagacatag 13973620  T
Q  382 ccctatcataatctacagaaaa 403  Q
    | |||||||||||||| |||||    
T  13973619 ctctatcataatctaccgaaaa 13973598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #123
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 556 - 612
Target Start/End: Complemental strand, 15601184 - 15601127
Alignment:
Q  556 tgtttgaataagccctaatagccaatctata-ttgattgggtttggctttgtatcatg 612  Q
    |||| |||||||||||||||||||||||||| || ||||||||||| |||||||||||    
T  15601184 tgttggaataagccctaatagccaatctatattttattgggtttggatttgtatcatg 15601127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #124
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 437 - 490
Target Start/End: Complemental strand, 18366805 - 18366752
Alignment:
Q  437 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaa 490  Q
    ||||||||||||||||| | | ||||||||||||||||||| ||||||||||||    
T  18366805 ccaaacctcacataatctcatgtttgcaaaaacgtttagactccgacttttcaa 18366752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #125
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 564 - 612
Target Start/End: Complemental strand, 1647816 - 1647768
Alignment:
Q  564 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    ||||||||||||||   ||||||||||||||||||||||||||||||||    
T  1647816 taagccctaatagctggtctatattgattgggtttggctttgtatcatg 1647768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #126
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 564 - 612
Target Start/End: Original strand, 13516727 - 13516775
Alignment:
Q  564 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    |||||||||||||||||||||| ||||||| |||||||| |||||||||    
T  13516727 taagccctaatagccaatctatgttgattgagtttggctgtgtatcatg 13516775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #127
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 564 - 612
Target Start/End: Complemental strand, 17781406 - 17781358
Alignment:
Q  564 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    |||||||||||||||||||||||||||||| |||||| ||| |||||||    
T  17781406 taagccctaatagccaatctatattgattgagtttggttttatatcatg 17781358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #128
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 564 - 612
Target Start/End: Original strand, 18534671 - 18534719
Alignment:
Q  564 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    ||||||||||||| |||||||||||||||| |||||| |||||||||||    
T  18534671 taagccctaatagtcaatctatattgattgagtttggttttgtatcatg 18534719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #129
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 564 - 612
Target Start/End: Complemental strand, 19090033 - 19089985
Alignment:
Q  564 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    |||||||||||||||||||||||||||||| |||||| ||| |||||||    
T  19090033 taagccctaatagccaatctatattgattgagtttggttttatatcatg 19089985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #130
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 564 - 612
Target Start/End: Complemental strand, 32057192 - 32057144
Alignment:
Q  564 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    ||||| |||||||||||||||| ||||||||||||| ||||||||||||    
T  32057192 taagctctaatagccaatctatgttgattgggtttgactttgtatcatg 32057144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #131
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 437 - 492
Target Start/End: Original strand, 12276556 - 12276611
Alignment:
Q  437 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagc 492  Q
    |||||||||| |||||| ||| ||||||||||||||||||| |||| |||||||||    
T  12276556 ccaaacctcagataatctcttgtttgcaaaaacgtttagactccgatttttcaagc 12276611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #132
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 311 - 418
Target Start/End: Complemental strand, 40039532 - 40039425
Alignment:
Q  311 tttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattcaagt 410  Q
    |||||| ||||||| |||||| |||||||   ||| || |||| |||| ||  || | ||||||| |||||| ||||||||||||||||||| |||||||    
T  40039532 tttcgcgcataaaattcaaaccgttaatcaaattttgatgccgctttcgcccacacgctcctgacacttagctctatcataatctacagaaatttcaagt 40039433  T
Q  411 ttcaacca 418  Q
    || |||||    
T  40039432 ttaaacca 40039425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #133
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 311 - 418
Target Start/End: Complemental strand, 50351239 - 50351132
Alignment:
Q  311 tttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattcaagt 410  Q
    |||||| | ||||| |||||| ||||||| | ||| || | ||||||| ||| || | ||||||| |||| | ||||||||||||||||||| |||||||    
T  50351239 tttcgcgcgtaaaattcaaaccgttaatcggattttgatgtcgttttcgcctacacggtcctgacacttaactctatcataatctacagaaatttcaagt 50351140  T
Q  411 ttcaacca 418  Q
     |||||||    
T  50351139 ctcaacca 50351132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #134
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 437 - 506
Target Start/End: Complemental strand, 13029452 - 13029384
Alignment:
Q  437 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattt 506  Q
    ||||||||||||||||| ||||||||| |||||||||| ||  ||||||||||| ||||||  |||||||    
T  13029452 ccaaacctcacataatctcttatttgc-aaaacgtttatacttcgacttttcaaacgaaaactccaattt 13029384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #135
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 377 - 418
Target Start/End: Complemental strand, 17758800 - 17758759
Alignment:
Q  377 cttagccctatcataatctacagaaaattcaagtttcaacca 418  Q
    |||||| ||||||||||||||||||| |||||||||||||||    
T  17758800 cttagctctatcataatctacagaaatttcaagtttcaacca 17758759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #136
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 377 - 418
Target Start/End: Complemental strand, 19060120 - 19060079
Alignment:
Q  377 cttagccctatcataatctacagaaaattcaagtttcaacca 418  Q
    |||||| ||||||||||||||||||| |||||||||||||||    
T  19060120 cttagctctatcataatctacagaaatttcaagtttcaacca 19060079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #137
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 564 - 612
Target Start/End: Original strand, 18510837 - 18510885
Alignment:
Q  564 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    |||||||||||| ||||||||||||||||| |||||  |||||||||||    
T  18510837 taagccctaatatccaatctatattgattgagtttgattttgtatcatg 18510885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #138
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 564 - 612
Target Start/End: Original strand, 18522578 - 18522626
Alignment:
Q  564 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    |||||||||||| ||||||||||||||||| |||||  |||||||||||    
T  18522578 taagccctaatatccaatctatattgattgagtttgattttgtatcatg 18522626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #139
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 205
Target Start/End: Original strand, 38167105 - 38167201
Alignment:
Q  109 acaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatg 205  Q
    |||| |||| ||||||| |||||||| |  |||  | |||||||||||||||||||||||  || |||||||||| ||||| |  ||||||||||||    
T  38167105 acaaggttaattctttcataaaaacacccttagatgattaggataaagtccctacacttaaaaataagtttggaaacaatttggttgaagaaaaatg 38167201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #140
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 240
Target Start/End: Complemental strand, 2277398 - 2277303
Alignment:
Q  145 gttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagc 240  Q
    ||||| ||||||||| ||| ||||  || || |||| ||||| ||||||| |||||||||   |||||||||||||| || ||||| |||||||||    
T  2277398 gttagaataaagtccatacccttaaaaacaactttgaaagcatttggagtaaagaaaaatacatttttaaggtttctggtatgacaaaatcgtagc 2277303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #141
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 319 - 418
Target Start/End: Complemental strand, 16934612 - 16934513
Alignment:
Q  319 ataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattcaagtttcaacca 418  Q
    |||||| |||||| ||||||| | ||| |||||||||||| ||| || | ||||||| |||  | ||| ||||||||||| ||| |||| ||||||||||    
T  16934612 ataaaattcaaaccgttaatcggattttgacgccgttttcgcctacacgctcctgacacttgactctaacataatctacaaaaatttcatgtttcaacca 16934513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #142
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 437 - 506
Target Start/End: Complemental strand, 13025860 - 13025792
Alignment:
Q  437 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattt 506  Q
    |||||||||| |||||| ||||||||| |||||||||| ||  ||||||||||| ||||||  |||||||    
T  13025860 ccaaacctcaaataatctcttatttgc-aaaacgtttatacttcgacttttcaaacgaaaactccaattt 13025792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #143
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 282 - 315
Target Start/End: Complemental strand, 52212844 - 52212811
Alignment:
Q  282 agacatcatcagattttcaacattcacgttttcg 315  Q
    ||||||||||||||||||||| ||||||||||||    
T  52212844 agacatcatcagattttcaaccttcacgttttcg 52212811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 320; Significance: 1e-180; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 320; E-Value: 1e-180
Query Start/End: Original strand, 54 - 556
Target Start/End: Original strand, 51476367 - 51476859
Alignment:
Q  54 aacaactttctttcctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggata 153  Q
    |||||| ||| ||| |||||||  |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||  ||||||||||    
T  51476367 aacaacattcattcttaccccaaagaccaactcacgaactcattagaccctttatacaaagttatttctttcctaaaaacatctttagatggttaggata 51476466  T
Q  154 aagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctccc 253  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||  |||||||| ||||||||||||||||||||| |||||||||||||||    
T  51476467 aagtccctacacttaggaagaagtttggaagcaattggagtgaagaaaattgcatttttaagttttctagtgtgacagaatcgtggcacgttggtctccc 51476566  T
Q  254 atcgtggcacgatttttccagcatctctagacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccg 353  Q
    |||||| |||| ||||| ||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  51476567 atcgtgacacggttttttcagcatctctagacagcatcagattttcaaccctcacgttttcgctcataaaaatcaaaccgttaatctgttttcgatgccg 51476666  T
Q  354 ttttcacctgcatgttcctgactcttagccctatcataatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgatttccaaacctcacataat 452  Q
    ||||||||| |||||||||||  ||||||||||||||||||||||| ||||||||||||||||||||||        ||||||||||||||||||| |||    
T  51476667 ttttcacctacatgttcctgaaacttagccctatcataatctacagaaaaattcaagtttcaaccaccc-aaaaaaatcgatttccaaacctcacacaat 51476765  T
Q  453 cccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaatgtaacccaaccccaaaactggttctaatcattg 552  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||    
T  51476766 cccttatttacaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatc----------aacccaaccccaaaactggttctaatcattg 51476855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 200; E-Value: 1e-108
Query Start/End: Original strand, 648 - 855
Target Start/End: Original strand, 18252030 - 18252237
Alignment:
Q  648 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgag 747  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  18252030 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 18252129  T
Q  748 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 847  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18252130 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 18252229  T
Q  848 ctgatgat 855  Q
    ||||||||    
T  18252230 ctgatgat 18252237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 84 - 511
Target Start/End: Original strand, 21473199 - 21473623
Alignment:
Q  84 ctcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaa 183  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||  |||| |||||||||||||||||||| ||||||||||||||    
T  21473199 ctcaacaactcattagaccctttatacaacgttatttctttcctaaaaacatctctagatggttcggataaagtccctacacttaggaagaagtttggaa 21473298  T
Q  184 gcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgatttttccagcatctctag 283  Q
    ||| ||||||||||||||| ||  |||||||||||| | || |||||  ||||| ||||||||||||||||||||||||||| ||||||||  |    ||    
T  21473299 gcatttggagtgaagaaaattgcatttttaaggtttttggtatgacatcatcgtggcacgttggtctcccatcgtggcacga-ttttccagatttggcag 21473397  T
Q  284 acatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagcc 383  Q
    ||  | ||||||||||||| |||||||||| |  |||||||||||||| ||||| | |||||||| ||||||||| ||| || | ||||||| |||||||    
T  21473398 acgacttcagattttcaaccttcacgtttttgaacataaaaatcaaaccgttaacccgttttcgatgccgttttcgcctacacgctcctgacacttagcc 21473497  T
Q  384 ctatcataatctacagaaa-attcaagtttcaaccacccnnnnnnnntcgattt-ccaaacctcacataatcccttatttgcaaaaacgtttagacaccg 481  Q
    ||||||||||||||| ||| |||||||||||||||||||        ||||||| ||||||||||||||||| ||||||||| |||||||||||||||||    
T  21473498 ctatcataatctacaaaaagattcaagtttcaaccaccc---aaaaatcgatttcccaaacctcacataatctcttatttgc-aaaacgtttagacaccg 21473593  T
Q  482 acttttcaagcgaaaatcccaattttcatc 511  Q
    ||| ||||| ||||||||||||||| ||||    
T  21473594 actattcaaacgaaaatcccaatttccatc 21473623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 54 - 511
Target Start/End: Original strand, 18823997 - 18824451
Alignment:
Q  54 aacaactttctttcctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggata 153  Q
    |||||||| | ||||||||| | ||||||||||| |||||||||||||||||||||||| || ||||||||||||||| |||||||||  ||||||||||    
T  18823997 aacaacttccattcctaccctaaggaccaactcatgaactcattagaccctttatacaacgtaatttctttcctaaaa-catctctagatggttaggata 18824095  T
Q  154 aagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctccc 253  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||| ||  |||||||||| | | || |||||  ||||| |||||||||||||||    
T  18824096 aagtccctacacttaggaagaagtttggaagcatttggagtgaagaaaattgcatttttaaggtatatggtatgacatcatcgtggcacgttggtctccc 18824195  T
Q  254 atcgtggcacgatttttccagcatctctagacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccg 353  Q
    |||||||||| ||||||||||  |    ||||  | ||||||||||||| ||||||||||||| |||||||||||||| ||||| | |||||||| |||     
T  18824196 atcgtggcacaatttttccagatttgacagacgacttcagattttcaaccttcacgttttcgcacataaaaatcaaaccgttaacccgttttcgatgcca 18824295  T
Q  354 ttttcacctgcatgttcctgactcttagccctatcataatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgattt-ccaaacctcacataa 451  Q
    ||||| ||| || | ||||||| |||||| |||||||||||||||| |||||||||||||||||||||         | ||||| |||||||||||||||    
T  18824296 ttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaattcaagtttcaaccacc---taaaaattgatttcccaaacctcacataa 18824392  T
Q  452 tcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatc 511  Q
    || ||||||||| ||||| |||||||||||||||||||| |||||||| |||||| ||||    
T  18824393 tctcttatttgc-aaaacctttagacaccgacttttcaaacgaaaatctcaatttccatc 18824451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 648 - 855
Target Start/End: Complemental strand, 18532721 - 18532514
Alignment:
Q  648 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgag 747  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||    
T  18532721 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagttcgtttaatggaacattaagtataacttaattgtgag 18532622  T
Q  748 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 847  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18532621 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtagataga 18532522  T
Q  848 ctgatgat 855  Q
    ||||||||    
T  18532521 ctgatgat 18532514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 648 - 855
Target Start/End: Complemental strand, 27131616 - 27131409
Alignment:
Q  648 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgag 747  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  27131616 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 27131517  T
Q  748 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 847  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  27131516 accccattaaacataaggaaactattctcaaagtatttgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtaggtaga 27131417  T
Q  848 ctgatgat 855  Q
    ||||||||    
T  27131416 ctgatgat 27131409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 650 - 855
Target Start/End: Complemental strand, 21171438 - 21171233
Alignment:
Q  650 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgagac 749  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||| ||| ||||||    
T  21171438 aaggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttcatggaacattaaatataacttaattgtgagac 21171339  T
Q  750 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 849  Q
    ||| || ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  21171338 cccgttgaacataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtgggtagact 21171239  T
Q  850 gatgat 855  Q
    ||||||    
T  21171238 gatgat 21171233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 650 - 855
Target Start/End: Complemental strand, 27310782 - 27310577
Alignment:
Q  650 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgagac 749  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  27310782 aaggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 27310683  T
Q  750 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 849  Q
    | | || ||||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  27310682 cacgttgaacataaggaaactattcttaaagtatcagtagtcaagctttattgagaagtggaatatcattaaagcatagagactattatgtgggtagact 27310583  T
Q  850 gatgat 855  Q
    ||||||    
T  27310582 gatgat 27310577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 162; E-Value: 5e-86
Query Start/End: Original strand, 650 - 855
Target Start/End: Complemental strand, 16359240 - 16359035
Alignment:
Q  650 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgagac 749  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||| ||||||    
T  16359240 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagaataacttaattgtgagac 16359141  T
Q  750 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 849  Q
    ||| |||||||||||||||||||||| |||||| || |||||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||    
T  16359140 cccgttaaacataaggaaactattcttaaagtaaccctagtcaagctttattgagaaatggaatatcattaaagcatagagactattatgtgggtagact 16359041  T
Q  850 gatgat 855  Q
    ||||||    
T  16359040 gatgat 16359035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 142; E-Value: 5e-74
Query Start/End: Original strand, 654 - 855
Target Start/End: Complemental strand, 36816834 - 36816633
Alignment:
Q  654 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgagacccca 753  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||| || ||| |||||| ||     
T  36816834 catttctttattgattttgttttgtttcaaaataatgaagtccctagaatagttcgtctgtttaatggaacattaagtataaattaattgtgagactccg 36816735  T
Q  754 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 853  Q
    ||||||||||||| | |||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||    
T  36816734 ttaaacataaggacattattcttaaagtatccatagtcaagctttattgagaagtgggataccattaaagcatagagactattatgtggatagactgatg 36816635  T
Q  854 at 855  Q
    ||    
T  36816634 at 36816633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 648 - 855
Target Start/End: Complemental strand, 3856126 - 3855919
Alignment:
Q  648 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgag 747  Q
    ||||||||||||||| || |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||    
T  3856126 acaaggcatttctttgtttattttgttttgtttcaaaataacaaagtccctagaatagttagcccgtttaatggaacattaagtataacttaattgtgag 3856027  T
Q  748 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 847  Q
    ||||||||||||||||||| | |||||| ||| |||  |||||||| |||||||| |||||||||||| |||||||||| |||||||||| || ||||||    
T  3856026 accccattaaacataaggacattattcttaaaatatttgtagtcaaactttattgtgaagtgggatattattaaagcatggagactattacgtgggtaga 3855927  T
Q  848 ctgatgat 855  Q
    ||||||||    
T  3855926 ctgatgat 3855919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 282 - 517
Target Start/End: Original strand, 52983830 - 52984064
Alignment:
Q  282 agacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 381  Q
    ||||| ||||||||||||||| |||||||||| || |||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||  |||||    
T  52983830 agacagcatcagattttcaaccttcacgtttttgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgttcctgaaacttag 52983929  T
Q  382 ccctatcataatctacagaaa-attcaagtttcaaccacccnnnnnnnntcgattt-ccaaacctcacataatcccttatttgcaaaaacgtttagacac 479  Q
    ||||||||||||||||||||| |||||||||||||||||||        ||||||| ||||||||||||||||| ||||||||||||||||||||||| |    
T  52983930 ccctatcataatctacagaaatattcaagtttcaaccaccc---aaaaatcgatttcccaaacctcacataatctcttatttgcaaaaacgtttagactc 52984026  T
Q  480 cgacttttcaagcgaaaatcccaattttcatcaaccca 517  Q
    |||||||||||| | |||| ||||||| |||| |||||    
T  52984027 cgacttttcaagtgtaaattccaatttccatcgaccca 52984064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 125; E-Value: 6e-64
Query Start/End: Original strand, 54 - 274
Target Start/End: Original strand, 52983536 - 52983756
Alignment:
Q  54 aacaactttctttcctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggata 153  Q
    |||||||| | ||||||||||| ||||||||||| ||||||||||||  |||||||||||||||||| ||||||||||||||||||||  ||||||||||    
T  52983536 aacaacttccattcctaccccaaggaccaactcatgaactcattagaaactttatacaaagttatttatttcctaaaaacatctctagatggttaggata 52983635  T
Q  154 aagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctccc 253  Q
    | ||||||||||||| |||||||| |||||||| |||||||||| |||| ||  ||||||||||||||    |||||| ||||| ||||||||||||| |    
T  52983636 aggtccctacacttacgaagaagtctggaagcatttggagtgaaaaaaattgcatttttaaggtttcttagatgacagcatcgtggcacgttggtctctc 52983735  T
Q  254 atcgtggcacgatttttccag 274  Q
    |||||||||||||||||||||    
T  52983736 atcgtggcacgatttttccag 52983756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 648 - 855
Target Start/End: Complemental strand, 22657429 - 22657221
Alignment:
Q  648 acaaggcatttctttattgatttt-gttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatga 746  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||| ||| |||    
T  22657429 acaagacatttctttattgatttttgttttgtttcaaaataataaagttcctagaatagttagtctgtttaatggaacattaaatataacttaattgtga 22657330  T
Q  747 gaccccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtag 846  Q
    |||||| ||||||||||||| || ||||| ||||| ||  |||||||||||||||  ||| || ||||||||||||||||||||||||| |||| | |||    
T  22657329 gacccctttaaacataaggacacaattcttaaagtgtctctagtcaagctttattctgaaatgagatatcattaaagcatagagactatcatgtggatag 22657230  T
Q  847 actgatgat 855  Q
    |||||||||    
T  22657229 actgatgat 22657221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 54 - 202
Target Start/End: Complemental strand, 13528451 - 13528303
Alignment:
Q  54 aacaactttctttcctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggata 153  Q
    |||||||| | ||||||||||| ||||||||||| ||||||||| ||| |||||||||| ||||||||||||||||||||||||||||  ||||||||||    
T  13528451 aacaacttccattcctaccccaaggaccaactcatgaactcattggacgctttatacaacgttatttctttcctaaaaacatctctagatggttaggata 13528352  T
Q  154 aagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaa 202  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  13528351 aagtccctacacttaggaagaagtttggaagcaattggagtgaagaaaa 13528303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 54 - 205
Target Start/End: Original strand, 18270656 - 18270807
Alignment:
Q  54 aacaactttctttcctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggata 153  Q
    |||||||| | ||| ||||||| | |||||||||| |||||||||||||||||||| || ||||||||||||||||||||||| |||  |||||||||||    
T  18270656 aacaacttccattcttaccccaagaaccaactcaataactcattagaccctttatataaggttatttctttcctaaaaacatcactaaacggttaggata 18270755  T
Q  154 aagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatg 205  Q
    |||||| |||||||| |||||||||||||||| |||||||||||||||||||    
T  18270756 aagtccttacacttaggaagaagtttggaagcgattggagtgaagaaaaatg 18270807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 54 - 205
Target Start/End: Original strand, 18275310 - 18275461
Alignment:
Q  54 aacaactttctttcctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggata 153  Q
    |||||||| | ||| ||||||| | |||||||||| |||||||||||||||||||| || ||||||||||||||||||||||| |||  |||||||||||    
T  18275310 aacaacttccattcttaccccaagaaccaactcaataactcattagaccctttatataaggttatttctttcctaaaaacatcactaaacggttaggata 18275409  T
Q  154 aagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatg 205  Q
    |||||| |||||||| |||||||||||||||| |||||||||||||||||||    
T  18275410 aagtccttacacttaggaagaagtttggaagcgattggagtgaagaaaaatg 18275461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 282 - 518
Target Start/End: Original strand, 18270928 - 18271163
Alignment:
Q  282 agacatcatcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactctta 380  Q
    ||||| |||||||||||| ||  ||||||||||||| | |||||  ||||| ||||| |||||||||| ||||||||| ||| || | ||||||| ||||    
T  18270928 agacaacatcagattttctaattttcacgttttcgcgcgtaaaatccaaaccgttaacctgttttcgatgccgttttcgcctacacgctcctgacactta 18271027  T
Q  381 gccctatcataatctacagaaa-attcaagtttcaaccacccnnnnnnnntcgattt-ccaaacctcacataatcccttatttgcaaaaacgtttagaca 478  Q
    || ||||||||||||||| ||| |||||||||||||||||||        ||||||| ||||||||||||||||| ||||||||| ||||||||||||||    
T  18271028 gctctatcataatctacaaaaagattcaagtttcaaccaccc---aaaaatcgatttcccaaacctcacataatctcttatttgc-aaaacgtttagaca 18271123  T
Q  479 ccgacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    || | ||||||| ||||||||||||||| |||||||||||    
T  18271124 ccaatttttcaaacgaaaatcccaatttccatcaacccaa 18271163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 282 - 518
Target Start/End: Original strand, 18275582 - 18275817
Alignment:
Q  282 agacatcatcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactctta 380  Q
    ||||| |||||||||||| ||  ||||||||||||| | |||||  ||||| ||||| |||||||||| ||||||||| ||| || | ||||||| ||||    
T  18275582 agacaacatcagattttctaattttcacgttttcgcgcgtaaaatccaaaccgttaacctgttttcgatgccgttttcgcctacacgctcctgacactta 18275681  T
Q  381 gccctatcataatctacagaaa-attcaagtttcaaccacccnnnnnnnntcgattt-ccaaacctcacataatcccttatttgcaaaaacgtttagaca 478  Q
    || ||||||||||||||| ||| |||||||||||||||||||        ||||||| ||||||||||||||||| ||||||||| ||||||||||||||    
T  18275682 gctctatcataatctacaaaaagattcaagtttcaaccaccc---aaaaatcgatttcccaaacctcacataatctcttatttgc-aaaacgtttagaca 18275777  T
Q  479 ccgacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    || | ||||||| ||||||||||||||| |||||||||||    
T  18275778 ccaatttttcaaacgaaaatcccaatttccatcaacccaa 18275817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 282 - 518
Target Start/End: Complemental strand, 13528158 - 13527924
Alignment:
Q  282 agacatcatcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactctta 380  Q
    ||||| |||||||||||| ||| ||||||||||||| | |||||  ||||| ||||| |  ||||||| | ||||||| ||| || | ||||||| ||||    
T  13528158 agacaacatcagattttctaactttcacgttttcgcgcgtaaaatccaaaccgttaacccattttcgatgtcgttttcgcctacacgctcctgacactta 13528059  T
Q  381 gccctatcataatctacagaaaa-ttcaagtttcaaccacccnnnnnnnntcgatttccaaa-cctcacataatcccttatttgcaaaaacgtttagaca 478  Q
    ||| ||||||||||||||||||| ||||||||||||||||||        |||||||||||| |||||||||||| ||||||||||||  ||||||||||    
T  13528058 gccttatcataatctacagaaaaattcaagtttcaaccacccaaaaa---tcgatttccaaaacctcacataatcgcttatttgcaaa--cgtttagaca 13527964  T
Q  479 ccgacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    ||||||||||||| |||||||||||||| ||| |||||||    
T  13527963 ccgacttttcaagggaaaatcccaatttccattaacccaa 13527924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 311 - 518
Target Start/End: Original strand, 51324137 - 51324343
Alignment:
Q  311 tttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattcaagt 410  Q
    |||||| | ||||| |||||| ||||||| | ||| || | ||||||| ||| |||| ||||||| ||| || ||||||||||||||||||| |||||||    
T  51324137 tttcgcgcgtaaaattcaaaccgttaatcggattttgatgtcgttttcgcctacatgctcctgacacttggctctatcataatctacagaaatttcaagt 51324236  T
Q  411 ttcaaccacccnnnnnnnntcgatttcc-aaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttca 509  Q
     ||||||| ||        ||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  51324237 ctcaaccatcccaagaa--tcattttcccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttgaagcgaaaatcccaattttca 51324334  T
Q  510 tcaacccaa 518  Q
    |||||||||    
T  51324335 tcaacccaa 51324343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 309 - 514
Target Start/End: Complemental strand, 7321014 - 7320812
Alignment:
Q  309 gttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattcaa 408  Q
    |||||||| | |||||  ||||| ||||||| |||||||| | ||||||| ||| || | ||||||| |||||| |||||||||||| ||||||||||||    
T  7321014 gttttcgcgcgtaaaatccaaaccgttaatccgttttcgatgtcgttttcgcctacacgctcctgacacttagctctatcataatctgcagaaaattcaa 7320915  T
Q  409 gtttcaaccacccnnnnnnnntcgatttcca-aacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaatttt 507  Q
    |||| ||||||||        |||||||||| |||||||||||||| |||||||||||||||||||| |||||||||||||||||| ||||| |||||||    
T  7320914 gttttaaccacccaaaaa---tcgatttccagaacctcacataatcacttatttgcaaaaacgtttatacaccgacttttcaagcg-aaatcacaatttt 7320819  T
Q  508 catcaac 514  Q
    |||||||    
T  7320818 catcaac 7320812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 67 - 202
Target Start/End: Original strand, 21542542 - 21542675
Alignment:
Q  67 cctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacact 166  Q
    ||||||||| |||||| |||| ||||||||||||||||| |||||| ||||| |||||||||||||||||||||  || |||||||||||||||||||||    
T  21542542 cctaccccaaggacca-ctcatgaactcattagaccctt-atacaacgttatatctttcctaaaaacatctctatacgtttaggataaagtccctacact 21542639  T
Q  167 tatgaagaagtttggaagcaattggagtgaagaaaa 202  Q
    || ||||||||||||||||| |||||||||||||||    
T  21542640 taggaagaagtttggaagcatttggagtgaagaaaa 21542675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 101 - 274
Target Start/End: Complemental strand, 20825821 - 20825648
Alignment:
Q  101 ccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaa 200  Q
    ||||| |||||||| |||||||| | |||||||||| ||||  | ||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||    
T  20825821 cccttaatacaaagctatttcttccataaaaacatccctagatgattaggataaagtccctacacttaggaagaagtttggaaccaattggagcgaagaa 20825722  T
Q  201 aaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgatttttccag 274  Q
    || ||  ||||| |||||| | ||   |||| ||||| |||||||||| |||||||||||||||||||||||||    
T  20825721 aattgcatttttgaggtttttggtcaaacagcatcgtggcacgttggtttcccatcgtggcacgatttttccag 20825648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 83 - 202
Target Start/End: Complemental strand, 42095567 - 42095449
Alignment:
Q  83 actcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttgga 182  Q
    ||||| ||||||||||||||||| |||||| ||||| |||||||||||||||||||||  || ||||||||||||||||||||||| |||||||||||||    
T  42095567 actcatgaactcattagaccctt-atacaacgttatatctttcctaaaaacatctctatacgtttaggataaagtccctacacttaggaagaagtttgga 42095469  T
Q  183 agcaattggagtgaagaaaa 202  Q
    |||| |||||||||||||||    
T  42095468 agcatttggagtgaagaaaa 42095449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 311 - 518
Target Start/End: Complemental strand, 21239464 - 21239258
Alignment:
Q  311 tttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattcaagt 410  Q
    |||||| | ||||| |||||| ||||||| | ||| || ||||||||  ||| || | ||||||| ||| || ||||||||||||||||||  |||||||    
T  21239464 tttcgcgcgtaaaattcaaaccgttaatcggattttgatgccgtttttgcctacacgctcctgacacttggctctatcataatctacagaattttcaagt 21239365  T
Q  411 ttcaaccacccnnnnnnnntcgatttc-caaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttca 509  Q
     ||||||| ||        ||  |||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  21239364 ctcaaccatccgaagaa--tcattttctcaaacctcacataatcccttatttgcaaaatcgttttgacaccgacttttcaagcgaaaatcccaattttca 21239267  T
Q  510 tcaacccaa 518  Q
    |||||||||    
T  21239266 tcaacccaa 21239258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 282 - 416
Target Start/End: Complemental strand, 27330567 - 27330432
Alignment:
Q  282 agacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 381  Q
    ||||| || |||||||||||| ||||||||||||| |||||||||||||| ||||||| ||||||||  |||||||||||| | ||||| |||| |||||    
T  27330567 agacagcaccagattttcaaccttcacgttttcgcgcataaaaatcaaactgttaatccgttttcgataccgttttcacctacgtgttcatgacacttag 27330468  T
Q  382 ccctatcataatctacag-aaaattcaagtttcaac 416  Q
    ||||||| |||| ||||| |||||||||||||||||    
T  27330467 ccctatcttaatgtacagaaaaattcaagtttcaac 27330432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 654 - 855
Target Start/End: Complemental strand, 27277756 - 27277557
Alignment:
Q  654 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgagacccca 753  Q
    ||||||||| ||| |||||||||||||||||||||||| |||||||||||| ||||||| ||||| ||| ||||| || | |||| ||   ||||||       
T  27277756 catttctttgttgtttttgttttgtttcaaaataataacgtccctagaataattagtccatttaacggagcatta-gtgtgacttaatcgcgagacctt- 27277659  T
Q  754 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 853  Q
    |||| |  || || | |||||| |||||||||||||||| ||||||||| |||  |||||| ||||||||||||||||||||||||| ||||||| ||||    
T  27277658 ttaaccgaaatgacattattcttaaagtatccgtagtcaggctttattgtgaaaagggataacattaaagcatagagactattatgtgggtagaccgatg 27277559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 282 - 508
Target Start/End: Original strand, 20058087 - 20058312
Alignment:
Q  282 agacatcatcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactctta 380  Q
    ||||| |||||||||||| ||  ||||||||||||  | |||||  |||||  |||| | |||||||| ||||||||| ||| || | |||||||  |||    
T  20058087 agacaacatcagattttccaattttcacgttttcgtgcgtaaaatccaaaccattaacccgttttcgatgccgttttcgcctacacgctcctgacagtta 20058186  T
Q  381 gccctatcataatctacagaaaat-tcaagtttcaaccacccnnnnnnnntcgatttcca-aacctcacataatcccttatttgcaaaaacgtttagaca 478  Q
    || ||||||||||||||| ||||  |||||||||||||||||        ||| |||||| |||||||||||||  ||||||||||||| ||||||||||    
T  20058187 gctctatcataatctacaaaaaaaatcaagtttcaaccacccaaaaa---tcggtttccagaacctcacataattacttatttgcaaaa-cgtttagaca 20058282  T
Q  479 ccgacttttcaagcgaaaatcccaattttc 508  Q
    || |||||||||||||||||||||||||||    
T  20058283 ccaacttttcaagcgaaaatcccaattttc 20058312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 81 - 274
Target Start/End: Complemental strand, 27330834 - 27330641
Alignment:
Q  81 caactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttg 180  Q
    |||| |||| ||||| ||||||||||| |||| |||| ||||||| | |||| ||| ||||  | ||||||||||||||||||||||| ||| | |||||    
T  27330834 caacacaaggactcactagaccctttacacaaggttaattctttcattaaaatatccctagatgattaggataaagtccctacacttaggaatatgtttg 27330735  T
Q  181 gaagcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgatttttccag 274  Q
    ||| ||||||||  | |||||| ||  |||| ||| ||| |||   ||||  ||||| |||||||||| |||||||||||||||||||||||||    
T  27330734 gaaacaattggatcgcagaaaattgcattttaaagatttttagaaagacaacatcgtggcacgttggtttcccatcgtggcacgatttttccag 27330641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 437 - 519
Target Start/End: Complemental strand, 20030934 - 20030853
Alignment:
Q  437 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaat 519  Q
    |||||||||||||| || ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  20030934 ccaaacctcacatagtctcttatttgcaaaa-cgtttagacaccgacttttcaagggaaaatcccaattttcattaacccaat 20030853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 682 - 855
Target Start/End: Complemental strand, 12006712 - 12006539
Alignment:
Q  682 aaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgagaccccattaaacataaggaaactattctcaaagt 781  Q
    ||||||||||||||||||||||||||||||  |||||||||| ||||||| |  ||| ||  ||||||||||| ||||||||||| | |||| | |||      
T  12006712 aaaataataaagtccctagaatagttagtctatttaatggaatattaagtgtgccttaatcgtgagaccccatgaaacataaggacattattattaaaac 12006613  T
Q  782 atccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 855  Q
    || ||||||||||| ||| || |||| |||||| ||||||| | |||||| | ||||||   ||||||||||||    
T  12006612 attcgtagtcaagccttagtgtgaagagggataacattaaaacttagagattgttatgtgcatagactgatgat 12006539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 682 - 855
Target Start/End: Complemental strand, 12014457 - 12014284
Alignment:
Q  682 aaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgagaccccattaaacataaggaaactattctcaaagt 781  Q
    |||||||||||||| ||||||||  ||||||||||||||||| ||||||| ||| || ||  | ||| |||||||||||||| ||   |||||| |||      
T  12014457 aaaataataaagtcactagaatacatagtccgtttaatggaatattaagtgtaaattaatcgttagatcccattaaacataatgatgttattcttaaaac 12014358  T
Q  782 atccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 855  Q
    ||||||||| |||||||| || |||| ||||||  |||||||| || |||| ||||||| |||||| |||||||    
T  12014357 atccgtagttaagctttagtgtgaagagggatacgattaaagcgtaaagaccattatgtgggtagaatgatgat 12014284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 660 - 855
Target Start/End: Complemental strand, 9918106 - 9917918
Alignment:
Q  660 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgagaccccattaaac 759  Q
    |||||||||||||||||||| ||||||||||||||| ||       |||||  ||||||| |||||||||||||||||| || | |||| || ||||||     
T  9918106 tttattgattttgttttgttacaaaataataaagtcactt------ttagtttgtttaatcgaacattaagtataacttgatcacgagatcc-attaaat 9918014  T
Q  760 ataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 855  Q
    ||||||| | |||||| ||| ||||  |||| |||||||||||  |||||||||| |||| ||||||||||| || ||||| |||||  |||||||    
T  9918013 ataaggacattattcttaaaatatctatagttaagctttattgttaagtgggatagcattgaagcatagagaatactatgtcggtaggttgatgat 9917918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 291 - 416
Target Start/End: Original strand, 35054221 - 35054347
Alignment:
Q  291 cagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcat 390  Q
    |||||||||||| | || |||||||| |||||||||||||| ||||||| |||||||| ||||||||||||| | |||||  ||| | |||||||||| |    
T  35054221 cagattttcaacctccaagttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcacctacgtgttcaagacacctagccctatctt 35054320  T
Q  391 aatctacag-aaaattcaagtttcaac 416  Q
    ||| || || |||||||||||||||||    
T  35054321 aatgtaaagaaaaattcaagtttcaac 35054347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 437 - 518
Target Start/End: Complemental strand, 7791850 - 7791770
Alignment:
Q  437 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    |||||||||||||| || ||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||| |||||||    
T  7791850 ccaaacctcacatagtctcttatttgcaaaa-cgtttagacaccgacttttcaagggaaagtcccaattttcattaacccaa 7791770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 282 - 403
Target Start/End: Complemental strand, 20825574 - 20825453
Alignment:
Q  282 agacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 381  Q
    ||||| ||||||||||||||| |  |||||||||| |||||||||||||| ||||||| |||||||| | ||||||| ||| |||| |||| || |||||    
T  20825574 agacaacatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgtcgttttcgcctacatgctcctaacacttag 20825475  T
Q  382 ccctatcataatctacagaaaa 403  Q
    | ||||||||||  ||||||||    
T  20825474 cactatcataatgcacagaaaa 20825453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 556 - 612
Target Start/End: Original strand, 18251936 - 18251992
Alignment:
Q  556 tgtttgaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18251936 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 18251992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 556 - 612
Target Start/End: Complemental strand, 18532813 - 18532757
Alignment:
Q  556 tgtttgaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18532813 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 18532757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 81 - 205
Target Start/End: Original strand, 20053790 - 20053914
Alignment:
Q  81 caactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttg 180  Q
    |||| |||| ||||||||||| ||||||||||||||||||||||| |||||||| | ||||    ||||||| ||||||||||||||   || |||||||    
T  20053790 caacacaaggactcattagactctttatacaaagttatttctttcataaaaacacccctagataattaggatgaagtccctacacttggaaataagtttg 20053889  T
Q  181 gaagcaattggagtgaagaaaaatg 205  Q
    ||| ||||| |  ||||||||||||    
T  20053890 gaaacaatttggttgaagaaaaatg 20053914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 307 - 418
Target Start/End: Original strand, 17148185 - 17148296
Alignment:
Q  307 acgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattc 406  Q
    |||||||||| |||||||||||||  ||||||| |||||||| || |||||| ||| |||| |||| || ||| || ||||||||||||||| ||| |||    
T  17148185 acgttttcgcgcataaaaatcaaatcgttaatccgttttcgatgcagttttcgcctacatgctcctaacacttggcactatcataatctacaaaaatttc 17148284  T
Q  407 aagtttcaacca 418  Q
    | ||||||||||    
T  17148285 atgtttcaacca 17148296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 555 - 612
Target Start/End: Complemental strand, 27310878 - 27310821
Alignment:
Q  555 ctgtttgaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    ||||| || |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  27310878 ctgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatcatg 27310821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 555 - 612
Target Start/End: Complemental strand, 16359337 - 16359280
Alignment:
Q  555 ctgtttgaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    ||||| || |||||||||||||||||||||||||||||||||| || |||||||||||    
T  16359337 ctgttggagtaagccctaatagccaatctatattgattgggttaggatttgtatcatg 16359280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 109 - 192
Target Start/End: Original strand, 17147838 - 17147921
Alignment:
Q  109 acaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattgga 192  Q
    |||| |||| ||||||| |||||| | | ||||  | ||||||||||||||||||||||| ||||||||||||||| |||||||    
T  17147838 acaaggttaattctttcataaaaatacccctagatgattaggataaagtccctacacttaggaagaagtttggaagtaattgga 17147921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 84 - 141
Target Start/End: Original strand, 21477772 - 21477829
Alignment:
Q  84 ctcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctag 141  Q
    ||||| ||||||||||| ||||||||||| ||||||||||| ||||||| ||||||||    
T  21477772 ctcaacaactcattagatcctttatacaacgttatttcttttctaaaaatatctctag 21477829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 654 - 723
Target Start/End: Complemental strand, 30720694 - 30720625
Alignment:
Q  654 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaa 723  Q
    ||||| ||||||| |||| |||||||| ||||||||||||| ||| ||||| ||||| ||||||||||||    
T  30720694 catttttttattggttttattttgttttaaaataataaagttcctggaataattagttcgtttaatggaa 30720625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 564 - 609
Target Start/End: Complemental strand, 36816926 - 36816881
Alignment:
Q  564 taagccctaatagccaatctatattgattgggtttggctttgtatc 609  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||    
T  36816926 taagccctaatattcaatctatattgattgggtttggctttgtatc 36816881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 564 - 612
Target Start/End: Complemental strand, 21171527 - 21171479
Alignment:
Q  564 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    ||||| |||||||||||||||||| ||||| ||||||||||||||||||    
T  21171527 taagctctaatagccaatctatatggattgagtttggctttgtatcatg 21171479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 553 - 612
Target Start/End: Complemental strand, 27131707 - 27131652
Alignment:
Q  553 tactgtttgaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    ||||||| |||||||||||||||||||||||||     ||||||||||||||||||||||    
T  27131707 tactgttggaataagccctaatagccaatctat----gttgggtttggctttgtatcatg 27131652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 567 - 612
Target Start/End: Complemental strand, 3856209 - 3856164
Alignment:
Q  567 gccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    |||||||||||||||| || ||||||||||||| ||||||||||||    
T  3856209 gccctaatagccaatccatcttgattgggtttgactttgtatcatg 3856164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 437 - 490
Target Start/End: Original strand, 21660130 - 21660183
Alignment:
Q  437 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaa 490  Q
    ||||||||||||||||| ||| ||| ||||||||||||||| |||||| |||||    
T  21660130 ccaaacctcacataatctctttttttcaaaaacgtttagactccgactcttcaa 21660183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 564 - 608
Target Start/End: Complemental strand, 22657513 - 22657469
Alignment:
Q  564 taagccctaatagccaatctatattgattgggtttggctttgtat 608  Q
    |||||| ||||||||||| ||||||||||| ||||||||||||||    
T  22657513 taagccttaatagccaatatatattgattgagtttggctttgtat 22657469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 205
Target Start/End: Complemental strand, 7321298 - 7321184
Alignment:
Q  91 actcattagaccctttatacaaagttatttct-ttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaatt 189  Q
    |||||||||||||||||| ||||||| ||| | ||| |||||||| | ||||  | |||| || |||||||||||||||  || |||||||||| |||||    
T  7321298 actcattagaccctttattcaaagttttttttcttcataaaaacacccctagatgattag-atgaagtccctacacttagaaataagtttggaaacaatt 7321200  T
Q  190 ggagtgaagaaaaatg 205  Q
     |  ||||||||||||    
T  7321199 tggttgaagaaaaatg 7321184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 311 - 418
Target Start/End: Original strand, 39060977 - 39061084
Alignment:
Q  311 tttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattcaagt 410  Q
    |||||| | ||||| |||||| ||||||| | ||| || | ||||||| ||| || | ||||||| |||| | ||||||||||||||||||| | |||||    
T  39060977 tttcgcgcgtaaaattcaaactgttaatcagattttgatgtcgttttcgcctacacgctcctgacacttaactctatcataatctacagaaattccaagt 39061076  T
Q  411 ttcaacca 418  Q
     |||||||    
T  39061077 ctcaacca 39061084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 233 - 274
Target Start/End: Original strand, 35054098 - 35054139
Alignment:
Q  233 atcgtagcacgttggtctcccatcgtggcacgatttttccag 274  Q
    ||||| |||||||||| ||||||| |||||||||||||||||    
T  35054098 atcgtggcacgttggtttcccatcatggcacgatttttccag 35054139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 267; Significance: 1e-148; HSPs: 93)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 267; E-Value: 1e-148
Query Start/End: Original strand, 19 - 413
Target Start/End: Complemental strand, 37785058 - 37784671
Alignment:
Q  19 ttaattcaggctctctgaaacacaatataatcctcaacaactttctttcctaccccagggaccaactcaagaactcattagaccctttatacaaagttat 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||        |||||||||||||||||||||||    
T  37785058 ttaattcaggctctctgaaacacaatataatcctcaacaactttctttcctaccccaaggactaactca--------ttagaccctttatacaaagttat 37784967  T
Q  119 ttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggtt 218  Q
    |||||||||||||||||||| ||  |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||  |||||||||||    
T  37784966 ttctttcctaaaaacatctcaagatggttaggataaagtccatacacttaggaagaagtttggaagcaattggagtgaagaaaattgcatttttaaggtt 37784867  T
Q  219 tctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgatttttccagcatctctagacatcatcagattttcaacattcacgttttcgctc 318  Q
    |||||||||||| |||||| ||||||||||||||||||||||||| |||||| || |||||| ||||| ||||||||||||||| ||||| |||||||||    
T  37784866 tctagtgtgacataatcgtggcacgttggtctcccatcgtggcacaattttttcaacatctcaagacagcatcagattttcaaccttcacattttcgctc 37784767  T
Q  319 ataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacag-aaaattcaagtttc 413  Q
    ||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  37784766 ataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgttcctgacacttagccctatcataatctacagaaaaattcaagtttc 37784671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 84 - 515
Target Start/End: Complemental strand, 19486609 - 19486179
Alignment:
Q  84 ctcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaa 183  Q
    ||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||||  ||||||||||||||||||||||||| ||||||||||||||    
T  19486609 ctcaacaactcattagaccctttatacaatgttatttctttcttaaaaacatctctagatggttaggataaagtccctacacttaagaagaagtttggaa 19486510  T
Q  184 gcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgatttttccagcatctctag 283  Q
    ||| ||||||||||||||| ||  |||||||||||||| || |||||  ||||| | ||||||||||||||||||||||||||||||||||  |    ||    
T  19486509 gcatttggagtgaagaaaattgcatttttaaggtttctggtatgacatcatcgtggtacgttggtctcccatcgtggcacgatttttccagatttgacag 19486410  T
Q  284 acatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagcc 383  Q
    ||  | ||||||||||||| |||||||||||||||||||||| ||| | ||||| | |||||||| ||||||||| ||| || | ||||||| ||||||     
T  19486409 acgacttcagattttcaaccttcacgttttcgctcataaaaaccaatccgttaacccgttttcgatgccgttttcgcctacacgctcctgacacttagct 19486310  T
Q  384 ctatcataatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgatttcc-aaacctcacataatcccttatttgcaaaaacgtttagacaccg 481  Q
    ||||||||||||| || ||||||||||||| ||||||||        ||| ||||| ||||||||||||||| |||||||||| |||||||||||| |||    
T  19486309 ctatcataatctatagaaaaattcaagtttaaaccaccc---aaaaatcggtttccaaaacctcacataatcacttatttgcagaaacgtttagacgccg 19486213  T
Q  482 acttttcaagcgaaaatcccaattttcatcaacc 515  Q
    ||| ||||||||||||||||||||||||||||||    
T  19486212 actattcaagcgaaaatcccaattttcatcaacc 19486179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 648 - 855
Target Start/End: Original strand, 29327784 - 29327991
Alignment:
Q  648 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgag 747  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||    
T  29327784 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtcagtttaatggaacattaagtataacttaattgtgag 29327883  T
Q  748 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 847  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29327884 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 29327983  T
Q  848 ctgatgat 855  Q
    ||||||||    
T  29327984 ctgatgat 29327991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 648 - 855
Target Start/End: Complemental strand, 11536269 - 11536062
Alignment:
Q  648 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgag 747  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| ||||    
T  11536269 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtacaacttaattgtgag 11536170  T
Q  748 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 847  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11536169 accccattaaacataaggaacctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 11536070  T
Q  848 ctgatgat 855  Q
    ||||||||    
T  11536069 ctgatgat 11536062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 648 - 855
Target Start/End: Complemental strand, 11543187 - 11542980
Alignment:
Q  648 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgag 747  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||    
T  11543187 acaatgcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtcag 11543088  T
Q  748 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 847  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11543087 accccattaaacataaggaacctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 11542988  T
Q  848 ctgatgat 855  Q
    ||||||||    
T  11542987 ctgatgat 11542980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 650 - 855
Target Start/End: Original strand, 15152445 - 15152650
Alignment:
Q  650 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgagac 749  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  15152445 aaggcatttctttattgagtttgttttgtttcaaaataataaagttcctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 15152544  T
Q  750 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 849  Q
    ||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15152545 cccgttaaacatacggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 15152644  T
Q  850 gatgat 855  Q
    ||||||    
T  15152645 gatgat 15152650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 170; E-Value: 9e-91
Query Start/End: Original strand, 650 - 855
Target Start/End: Original strand, 15148144 - 15148349
Alignment:
Q  650 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgagac 749  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||| ||| ||||||    
T  15148144 aaggcatttctttattgagtttgttttgtttcaaaataataaagttcctagaatagttagtccgtttgattgaacattaagtataacttaattgtgagac 15148243  T
Q  750 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 849  Q
    ||| |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15148244 cccgttaaacataaggaaactattcttaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 15148343  T
Q  850 gatgat 855  Q
    ||||||    
T  15148344 gatgat 15148349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 650 - 855
Target Start/End: Original strand, 18561009 - 18561214
Alignment:
Q  650 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgagac 749  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | | ||||||    
T  18561009 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaactgtgagac 18561108  T
Q  750 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 849  Q
    ||| |||||||| ||||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  18561109 cccgttaaacattaggaaactattcttaaagtatctgtagtcaagctttattgagaggtgggatatcattaaagcatagagactattatgtgggtagact 18561208  T
Q  850 gatgat 855  Q
    ||||||    
T  18561209 gatgat 18561214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 282 - 556
Target Start/End: Original strand, 11054315 - 11054579
Alignment:
Q  282 agacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 381  Q
    ||||| ||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||| |||||||||||||  ||||||||||| |||||    
T  11054315 agacaacatcagattttcaaccttcacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctatatgttcctgacacttag 11054414  T
Q  382 ccctatcataatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgatttccaaacctcacataatcccttatttgcaaaaacgtttagacacc 480  Q
    |||||||||||| || || ||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11054415 ccctatcataatatatagaaaaattcaagtttcaaccaccc-aaaaaaatcgatttccaaacctcacataatcccttatttgcaaaaacgtttagacacc 11054513  T
Q  481 gacttttcaagcgaaaatcccaattttcatcaacccaatgtaacccaaccccaaaactggttctaatcattgtact 556  Q
    |||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||    
T  11054514 gacttttcaagcgaaaatcccaattttcatc----------aacccaaccccaaaactggttctaatcattgtact 11054579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 162; E-Value: 5e-86
Query Start/End: Original strand, 650 - 855
Target Start/End: Original strand, 12750828 - 12751033
Alignment:
Q  650 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgagac 749  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||    
T  12750828 aaggcatttctttattgattttgttttgtttcaaagtaataaagtccctagaatagttagtccgtttaatgaaacattaagtataacttaattgtgagac 12750927  T
Q  750 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 849  Q
    | | |||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | ||||||    
T  12750928 ctcgttaaacataaagaaactattcttaaagtatccgtagtcaagctttattgagaagttggatatcattaaagcatagagactattatgtggatagact 12751027  T
Q  850 gatgat 855  Q
    ||||||    
T  12751028 gatgat 12751033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 654 - 851
Target Start/End: Original strand, 12738542 - 12738739
Alignment:
Q  654 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgagacccca 753  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||| |||||||| |||||||| ||| |||||||       
T  12738542 catttctttattgattttattttgtttcaaaataataaagtccctagaatagttagtttgtttaatgaaacattaattataacttaattgtgagaccttg 12738641  T
Q  754 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactga 851  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  12738642 ttaaacataaggaaactattcttaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtgggtagactga 12738739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 145; E-Value: 7e-76
Query Start/End: Original strand, 54 - 274
Target Start/End: Original strand, 11054021 - 11054241
Alignment:
Q  54 aacaactttctttcctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggata 153  Q
    |||||||||| |||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  11054021 aacaactttcattcctaccccaaagaccaactcacgaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagatggttaggata 11054120  T
Q  154 aagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctccc 253  Q
    ||||||||||||||| |||||||||||||||||||||||| |||||||| ||  |||||||||||||| |  ||  || ||| | |||||||||||||||    
T  11054121 aagtccctacacttaggaagaagtttggaagcaattggagcgaagaaaattgcatttttaaggtttcttggatgtgagcatcatggcacgttggtctccc 11054220  T
Q  254 atcgtggcacgatttttccag 274  Q
    |||||||||||||||||||||    
T  11054221 atcgtggcacgatttttccag 11054241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 650 - 855
Target Start/End: Complemental strand, 18258047 - 18257842
Alignment:
Q  650 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgagac 749  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| |||| ||| ||||||    
T  18258047 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaataattagtctgtttaatggaacattaagtatgacttaattgtgagac 18257948  T
Q  750 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 849  Q
    ||||||||||| ||||| | |||||| |||||||||||||||||| ||| |||  |||| ||||| || ||| ||||| |||||||||||| | |||| |    
T  18257947 cccattaaacacaaggacattattcttaaagtatccgtagtcaagtttttttgttaagtaggataacaataatgcataaagactattatgtggatagatt 18257848  T
Q  850 gatgat 855  Q
    ||||||    
T  18257847 gatgat 18257842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 54 - 205
Target Start/End: Complemental strand, 3289479 - 3289328
Alignment:
Q  54 aacaactttctttcctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggata 153  Q
    |||||||| | ||| ||||||| | |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  3289479 aacaacttccattcttaccccaagaaccaactcaataactcattagaccctttatacaaggttatttctttcctaaaaacatctctagacggttaggata 3289380  T
Q  154 aagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatg 205  Q
    |||||| |||||||| ||||||||||| ||||||||||||||||||||||||    
T  3289379 aagtccttacacttaggaagaagtttgaaagcaattggagtgaagaaaaatg 3289328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 54 - 205
Target Start/End: Original strand, 13256021 - 13256172
Alignment:
Q  54 aacaactttctttcctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggata 153  Q
    |||||||| | ||| ||||||| | |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| | |||||||||    
T  13256021 aacaacttccattcttaccccaagaaccaactcaataactcattagaccctttatacaaggttatttctttcctaaaaacatctctagacagttaggata 13256120  T
Q  154 aagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatg 205  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  13256121 aagtccttacacttaggaagaagtttggaagcaattggagtgaagaaaaatg 13256172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 54 - 274
Target Start/End: Complemental strand, 21735161 - 21734941
Alignment:
Q  54 aacaactttctttcctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggata 153  Q
    |||||||| | |||||||| ||  |||||||||| ||||||||||| |||||||||||| |||||||| |  ||||||||||||||||  ||||||||||    
T  21735161 aacaacttccattcctaccacaaagaccaactcatgaactcattagcccctttatacaaggttatttcatagctaaaaacatctctagatggttaggata 21735062  T
Q  154 aagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctccc 253  Q
    ||||||||||||||| ||| ||||||||||||| ||||||||||||| | ||  |||||||||||| | |  ||||   ||||| |||||||||||||||    
T  21735061 aagtccctacacttaggaataagtttggaagcatttggagtgaagaatattgcatttttaaggtttattggatgactacatcgtggcacgttggtctccc 21734962  T
Q  254 atcgtggcacgatttttccag 274  Q
    |||||| ||||||||||||||    
T  21734961 atcgtgtcacgatttttccag 21734941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 83 - 274
Target Start/End: Original strand, 4280464 - 4280654
Alignment:
Q  83 actcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttgga 182  Q
    ||||| ||||||||||||||||| |||| | ||||| |||||||||||||||||||||   | ||||||||||||||||||||||| |||||||||||||    
T  4280464 actcatgaactcattagaccctt-atactacgttatatctttcctaaaaacatctctatatgtttaggataaagtccctacacttaggaagaagtttgga 4280562  T
Q  183 agcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgatttttccag 274  Q
    |||| ||||||||||||||| ||  |||||| ||||| | |  |||||| ||||| |||||||||| |||||||||||||||||||||||||    
T  4280563 agcatttggagtgaagaaaattgcatttttagggtttattggatgacagcatcgtggcacgttggtatcccatcgtggcacgatttttccag 4280654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 84 - 221
Target Start/End: Complemental strand, 10063688 - 10063551
Alignment:
Q  84 ctcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaa 183  Q
    ||||| |||||||||||||||||||||||  |||||||||||||||||||||||||||  ||||||||||||||||||||||||| |||||||| |||||    
T  10063688 ctcaacaactcattagaccctttatacaacattatttctttcctaaaaacatctctagatggttaggataaagtccctacacttaggaagaagtctggaa 10063589  T
Q  184 gcaattggagtgaagaaaaatgtctttttaaggtttct 221  Q
     || ||||||||||||||| ||  ||||||||||||||    
T  10063588 acatttggagtgaagaaaattgcatttttaaggtttct 10063551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 68 - 205
Target Start/End: Complemental strand, 17468090 - 17467953
Alignment:
Q  68 ctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacactt 167  Q
    ||||||||  ||||||| || ||||||||||| |||||||||| | |||||||||| |||||||||||||||||  ||||||||||||||||||||||||    
T  17468090 ctaccccaaagaccaacccatgaactcattagcccctttatacgaggttatttcttacctaaaaacatctctagatggttaggataaagtccctacactt 17467991  T
Q  168 atgaagaagtttggaagcaattggagtgaagaaaaatg 205  Q
    | |||||||||||||||||||||||| |||||||||||    
T  17467990 aggaagaagtttggaagcaattggagcgaagaaaaatg 17467953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 68 - 205
Target Start/End: Original strand, 17585124 - 17585261
Alignment:
Q  68 ctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacactt 167  Q
    ||||||||  ||||||| || ||||||||||| |||||||||| | |||||||||| |||||||||||||||||  ||||||||||||||||||||||||    
T  17585124 ctaccccaaagaccaacccatgaactcattagcccctttatacgaggttatttcttacctaaaaacatctctagatggttaggataaagtccctacactt 17585223  T
Q  168 atgaagaagtttggaagcaattggagtgaagaaaaatg 205  Q
    | |||||||||||||||||||||||| |||||||||||    
T  17585224 aggaagaagtttggaagcaattggagcgaagaaaaatg 17585261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 68 - 205
Target Start/End: Original strand, 37380225 - 37380362
Alignment:
Q  68 ctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacactt 167  Q
    ||||||||  ||||||| || ||||||||||| |||||||||| | |||||||||| |||||||||||||||||  ||||||||||||||||||||||||    
T  37380225 ctaccccaaagaccaacccatgaactcattagcccctttatacgaggttatttcttacctaaaaacatctctagatggttaggataaagtccctacactt 37380324  T
Q  168 atgaagaagtttggaagcaattggagtgaagaaaaatg 205  Q
    | |||||||||||||||||||||||| |||||||||||    
T  37380325 aggaagaagtttggaagcaattggagcgaagaaaaatg 37380362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 282 - 518
Target Start/End: Original strand, 13256296 - 13256531
Alignment:
Q  282 agacatcatcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactctta 380  Q
    ||||| |||||||||||| ||  ||||||||||||| | |||||   |||| ||||| | |||||||| |  |||||| ||| || | ||||||| ||||    
T  13256296 agacaacatcagattttctaattttcacgttttcgcgcgtaaaatctaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacactta 13256395  T
Q  381 gccctatcataatctacagaaaa-ttcaagtttcaaccacccnnnnnnnntcgatttcca-aacctcacataatcccttatttgcaaaaacgtttagaca 478  Q
    || |||||||||||||||||||| |||||||||||||||||         |||||||||| |||||||||||||| ||||||||||||| ||||||||||    
T  13256396 gctctatcataatctacagaaaaattcaagtttcaaccacc---aaaaaatcgatttccagaacctcacataatcacttatttgcaaaa-cgtttagaca 13256491  T
Q  479 ccgacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  13256492 ccgagttttcaagcgaaaatcccaattttcatcaacccaa 13256531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 67 - 202
Target Start/End: Original strand, 19616781 - 19616914
Alignment:
Q  67 cctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacact 166  Q
    ||||||||| |||||| |||| ||||||||||||||||| |||||| ||||| |||||||||||||||||||||  || |||||||||||||||||||||    
T  19616781 cctaccccaaggacca-ctcatgaactcattagaccctt-atacaacgttatatctttcctaaaaacatctctatacgtttaggataaagtccctacact 19616878  T
Q  167 tatgaagaagtttggaagcaattggagtgaagaaaa 202  Q
    || ||||||||||||||||| |||||||||||||||    
T  19616879 taggaagaagtttggaagcatttggagtgaagaaaa 19616914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 67 - 202
Target Start/End: Original strand, 27565324 - 27565457
Alignment:
Q  67 cctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacact 166  Q
    ||||||||| |||||| |||| ||||||||||||||||| |||||| ||||| |||||||||||||||||||||  || |||||||||||||||||||||    
T  27565324 cctaccccaaggacca-ctcatgaactcattagaccctt-atacaacgttatatctttcctaaaaacatctctatacgtttaggataaagtccctacact 27565421  T
Q  167 tatgaagaagtttggaagcaattggagtgaagaaaa 202  Q
    || ||||||||||||||||| |||||||||||||||    
T  27565422 taggaagaagtttggaagcatttggagtgaagaaaa 27565457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 65 - 221
Target Start/End: Original strand, 48273613 - 48273770
Alignment:
Q  65 ttcctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttccta-aaaacatctctagtcggttaggataaagtccctac 163  Q
    |||||||||||  |||||||||| |||||||||||||||||||||||| ||||| |  |||||| |||||||||||||  | |||||||||||| |||||    
T  48273613 ttcctaccccaaagaccaactcatgaactcattagaccctttatacaaggttatcttcttcctacaaaacatctctagatgattaggataaagttcctac 48273712  T
Q  164 acttatgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggtttct 221  Q
    ||||| |||||||| ||||| || ||||||||||||||| ||  ||||||||||||||    
T  48273713 acttaagaagaagtctggaaacatttggagtgaagaaaattgcatttttaaggtttct 48273770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 283 - 518
Target Start/End: Original strand, 48274087 - 48274321
Alignment:
Q  283 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 382  Q
    |||| |||||||||| || | ||||||||||||| | |||||| |||||  |||| | |||||||| ||||||||| ||| |  | ||||||| | ||||    
T  48274087 gacagcatcagatttccacccttcacgttttcgcgcctaaaaaccaaaccattaacccgttttcgatgccgttttcgcctacgcgctcctgacacatagc 48274186  T
Q  383 cctatcataatctacagaaaa-ttcaagtttcaaccacccnnnnnnnntcgatttccaaa-cctcacataatcccttatttgcaaaaacgtttagacacc 480  Q
     |||||| ||||||||||||| ||| ||||||||||||||        ||| |||||||| |||||||||||| || |||||||||||  ||||||||||    
T  48274187 tctatcacaatctacagaaaaattccagtttcaaccacccaaaaa---tcggtttccaaaacctcacataatcactcatttgcaaaaatatttagacacc 48274283  T
Q  481 gacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  48274284 gactcttcaagcgaaaatcccaattttcatcaatccaa 48274321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 107 - 274
Target Start/End: Complemental strand, 2191240 - 2191073
Alignment:
Q  107 atacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatgt 206  Q
    |||||||  |||||||| | |||||||||| ||||  | ||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||| ||     
T  2191240 atacaaatctatttcttccataaaaacatccctagatgattaggataaagtccctacacttaggaagaagtttggaaccaattggagcgaagaaaattgc 2191141  T
Q  207 ctttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgatttttccag 274  Q
     ||||| |||||| | ||   |||| ||||| |||||||||| |||||||||||||||||||||||||    
T  2191140 atttttgaggtttttggtcaaacagcatcgtggcacgttggtttcccatcgtggcacgatttttccag 2191073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 282 - 508
Target Start/End: Complemental strand, 17467831 - 17467607
Alignment:
Q  282 agacatcatcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactctta 380  Q
    ||||| |||||||||||| ||  ||||||||||||| | |||||  ||||| ||||| | |||||||| ||||||||| ||| |  | ||||||| ||||    
T  17467831 agacaacatcagattttctaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgccgttttcgcctacgcgctcctgacactta 17467732  T
Q  381 gccctatcataatctacag-aaaattcaag-tttcaaccacccnnnnnnnntcgatttcca-aacctcacataatcccttatttgcaaaaacgtttagac 477  Q
    || |||||||||||||||| |||||||||| ||||||||||||        |||||||||| ||||||||||| ||   | |||||||||||||||||||    
T  17467731 gctctatcataatctacagaaaaattcaagttttcaaccaccc---aaaactcgatttccagaacctcacatactc---tgtttgcaaaaacgtttagac 17467638  T
Q  478 accgacttttcaagcgaaaatcccaattttc 508  Q
    ||||| |||||||||||||||||||||||||    
T  17467637 accgagttttcaagcgaaaatcccaattttc 17467607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 282 - 508
Target Start/End: Original strand, 17585383 - 17585607
Alignment:
Q  282 agacatcatcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactctta 380  Q
    ||||| |||||||||||| ||  ||||||||||||| | |||||  ||||| ||||| | |||||||| ||||||||| ||| |  | ||||||| ||||    
T  17585383 agacaacatcagattttctaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgccgttttcgcctacgcgctcctgacactta 17585482  T
Q  381 gccctatcataatctacag-aaaattcaag-tttcaaccacccnnnnnnnntcgatttcca-aacctcacataatcccttatttgcaaaaacgtttagac 477  Q
    || |||||||||||||||| |||||||||| ||||||||||||        |||||||||| ||||||||||| ||   | |||||||||||||||||||    
T  17585483 gctctatcataatctacagaaaaattcaagttttcaaccaccc---aaaactcgatttccagaacctcacatactc---tgtttgcaaaaacgtttagac 17585576  T
Q  478 accgacttttcaagcgaaaatcccaattttc 508  Q
    ||||| |||||||||||||||||||||||||    
T  17585577 accgagttttcaagcgaaaatcccaattttc 17585607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 108 - 274
Target Start/End: Original strand, 25123649 - 25123815
Alignment:
Q  108 tacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatgtc 207  Q
    ||||||| |||||||| | |||||||||| ||||  | ||||||||||||||||||||||| |||||||||||||| ||||||||  |||||||| ||      
T  25123649 tacaaagctatttcttccataaaaacatccctagatgattaggataaagtccctacacttaggaagaagtttggaatcaattggaccgaagaaaattgca 25123748  T
Q  208 tttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgatttttccag 274  Q
    ||||| |||||| | ||   |||  ||||| |||||||||| |||||||||||||||||||||||||    
T  25123749 tttttgaggtttttggttaaacaacatcgtggcacgttggtttcccatcgtggcacgatttttccag 25123815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 437 - 514
Target Start/End: Complemental strand, 13698933 - 13698856
Alignment:
Q  437 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaac 514  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  13698933 ccaaacctcacataatcccttatttgcaaaaacgtttagacacctacttttcaagcgaaaatcccaatcttcatcaac 13698856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 282 - 416
Target Start/End: Complemental strand, 26071079 - 26070944
Alignment:
Q  282 agacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 381  Q
    ||||| || |||||||||||| |  |||||||||| |||||||||||||| |||||||||||||||| ||| ||||||||| | ||||| |||| |||||    
T  26071079 agacagcaccagattttcaacctcaacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccattttcacctacgtgttcatgacacttag 26070980  T
Q  382 ccctatcataatctacag-aaaattcaagtttcaac 416  Q
    ||||||| |||| ||||| |||||||||||||||||    
T  26070979 ccctatcttaatgtacagaaaaattcaagtttcaac 26070944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 282 - 416
Target Start/End: Complemental strand, 26094866 - 26094731
Alignment:
Q  282 agacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 381  Q
    ||||| || |||||||||||| |  |||||||||| |||||||||||||| |||||||||||||||| ||| ||||||||| | ||||| |||| |||||    
T  26094866 agacagcaccagattttcaacctcaacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccattttcacctacgtgttcatgacacttag 26094767  T
Q  382 ccctatcataatctacag-aaaattcaagtttcaac 416  Q
    ||||||| |||| ||||| |||||||||||||||||    
T  26094766 ccctatcttaatgtacagaaaaattcaagtttcaac 26094731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 654 - 836
Target Start/End: Original strand, 13392157 - 13392338
Alignment:
Q  654 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgagacccca 753  Q
    ||||||||| |||| |||||||||||||||||||||||||| ||||||| | |||||| | |||||||| |||||||| | |||| ||  ||||| ||||    
T  13392157 catttctttgttgactttgttttgtttcaaaataataaagttcctagaacaattagtctgcttaatggagcattaagtgtgacttaatcgtgaga-ccca 13392255  T
Q  754 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactatt 836  Q
    |||||   ||||| | |||||| ||||||||  ||||||| |||||||| |||  |||||| ||||||| |||||||||||||    
T  13392256 ttaaatgaaaggacattattcttaaagtatcaatagtcaaactttattgtgaaaagggataacattaaaacatagagactatt 13392338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 288 - 416
Target Start/End: Original strand, 2028359 - 2028488
Alignment:
Q  288 catcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctat 387  Q
    ||||||||||||||| |  |||||||||| |||||||||||||| |||||||||||||||| ||||||||||||| | ||||  |||| |||||||||||    
T  2028359 catcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacttgtttatgacacttagccctat 2028458  T
Q  388 cataatctacag-aaaattcaagtttcaac 416  Q
    | |||| ||||| |||| ||||||||||||    
T  2028459 cttaatgtacagaaaaagtcaagtttcaac 2028488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 81 - 270
Target Start/End: Complemental strand, 26071325 - 26071136
Alignment:
Q  81 caactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttg 180  Q
    |||| |||| ||||| ||||||||||| |||| |||| ||||||| |||||||| | ||||  | ||||||||||||||||| |||||  || |||||||    
T  26071325 caacacaaggactcactagaccctttacacaaggttaattctttcataaaaacacccctagatgattaggataaagtccctatacttagaaataagtttg 26071226  T
Q  181 gaagcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgattttt 270  Q
    ||| ||||||||   ||||||| ||  |||||||||||| |||   ||||| ||||| |||||||||| |||||||||| ||||||||||    
T  26071225 gaaacaattggatcaaagaaaattgcatttttaaggtttttagaaagacagcatcgtggcacgttggtttcccatcgtgacacgattttt 26071136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 81 - 270
Target Start/End: Complemental strand, 26095112 - 26094923
Alignment:
Q  81 caactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttg 180  Q
    |||| |||| ||||| ||||||||||| |||| |||| ||||||| |||||||| | ||||  | ||||||||||||||||| |||||  || |||||||    
T  26095112 caacacaaggactcactagaccctttacacaaggttaattctttcataaaaacacccctagatgattaggataaagtccctatacttagaaataagtttg 26095013  T
Q  181 gaagcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgattttt 270  Q
    ||| ||||||||   ||||||| ||  |||||||||||| |||   ||||| ||||| |||||||||| |||||||||| ||||||||||    
T  26095012 gaaacaattggatcaaagaaaattgcatttttaaggtttttagaaagacagcatcgtggcacgttggtttcccatcgtgacacgattttt 26094923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 101 - 223
Target Start/End: Complemental strand, 14251893 - 14251771
Alignment:
Q  101 ccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaa 200  Q
    ||||| |||||||| |||||||||| |||||||||| ||||  | ||||||||||||||||||||||| ||||||||||||||| |||||||   |||||    
T  14251893 cccttaatacaaagctatttctttcataaaaacatccctagatgattaggataaagtccctacacttaggaagaagtttggaagtaattggatcaaagaa 14251794  T
Q  201 aaatgtctttttaaggtttctag 223  Q
    || ||  ||||||||||||||||    
T  14251793 aattgcatttttaaggtttctag 14251771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 283 - 510
Target Start/End: Complemental strand, 3289205 - 3288980
Alignment:
Q  283 gacatcatcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 381  Q
    |||| |||||||||||| ||| ||||| ||||||| |||||||  ||||  ||||| |  ||||||| ||||||||  ||| || ||||||||| |||||    
T  3289205 gacagcatcagattttctaactttcacattttcgcgcataaaatccaaattgttaacccattttcgatgccgtttttgcctacacgttcctgacacttag 3289106  T
Q  382 ccctatcataatctacagaaaa-ttcaagtttcaaccacccnnnnnnnntcgatttcca-aacctcacataatcccttatttgcaaaaacgtttagacac 479  Q
    | |||||||||||||||||||| ||||||||||||||||||        ||||||| || |||||||||||||| ||||||||| |||||| || |||||    
T  3289105 ctctatcataatctacagaaaatttcaagtttcaaccaccc---aaaaatcgattttcagaacctcacataatcacttatttgc-aaaacg-ttggacac 3289011  T
Q  480 cgacttttcaagcgaaaatcccaattttcat 510  Q
    ||||||||||| |  |||| |||||||||||    
T  3289010 cgacttttcaaacataaattccaattttcat 3288980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 146 - 274
Target Start/End: Complemental strand, 15525581 - 15525453
Alignment:
Q  146 ttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgtt 245  Q
    ||||||||||||||||| ||||| |||||||||||||| ||||||||| |||||||| ||  ||||| |||||| | ||   |||| |||||  ||||||    
T  15525581 ttaggataaagtccctatacttaggaagaagtttggaaccaattggagcgaagaaaattgcatttttgaggtttttggtcaaacagcatcgtgtcacgtt 15525482  T
Q  246 ggtctcccatcgtggcacgatttttccag 274  Q
    ||| |||||||||||||||||||||||||    
T  15525481 ggtttcccatcgtggcacgatttttccag 15525453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 109 - 264
Target Start/End: Complemental strand, 42057375 - 42057220
Alignment:
Q  109 acaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatgtct 208  Q
    |||| |||| ||||||| |||||||| | ||||  | ||||||||||||||||||||||| ||| |||||||||| ||||||||| |||||||| ||  |    
T  42057375 acaaggttaattctttcataaaaacacccctagatgattaggataaagtccctacacttaggaaaaagtttggaaccaattggagcgaagaaaattgcat 42057276  T
Q  209 ttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacg 264  Q
    |||| |||||| | ||   |||| ||||| |||||||||| |||||||||||||||    
T  42057275 ttttgaggtttttggtcaaacagcatcgtggcacgttggtttcccatcgtggcacg 42057220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 291 - 416
Target Start/End: Complemental strand, 112081 - 111955
Alignment:
Q  291 cagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcat 390  Q
    |||||||||||| | ||||||||||| ||||| |||||||| ||||||| |||||| | ||||||||||||| | ||||| |||| |||||||||||| |    
T  112081 cagattttcaacctccacgttttcgcgcataataatcaaaccgttaatccgttttcaatgccgttttcacctacgtgttcatgacacttagccctatctt 111982  T
Q  391 aatctacag-aaaattcaagtttcaac 416  Q
    | | ||||| |||||||||||||||||    
T  111981 agtgtacagaaaaattcaagtttcaac 111955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 101 - 219
Target Start/End: Original strand, 2028127 - 2028245
Alignment:
Q  101 ccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaa 200  Q
    ||||| |||||||| |||||||| | |||||||||| ||||  | ||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||    
T  2028127 cccttaatacaaagctatttcttccataaaaacatccctagatgattaggataaagtccctacacttaggaagaagtttggaaccaattggagcgaagaa 2028226  T
Q  201 aaatgtctttttaaggttt 219  Q
    || ||  ||||| ||||||    
T  2028227 aattgcatttttgaggttt 2028245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 101 - 223
Target Start/End: Original strand, 15926828 - 15926950
Alignment:
Q  101 ccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaa 200  Q
    ||||| |||||||| |||||||||| |||||||||| ||||  | ||||||||||||||||| ||||| ||||||||||||||| |||||||   |||||    
T  15926828 cccttaatacaaagctatttctttcataaaaacatccctagatgattaggataaagtccctagacttaggaagaagtttggaagtaattggatcaaagaa 15926927  T
Q  201 aaatgtctttttaaggtttctag 223  Q
    || ||  ||||||||||||||||    
T  15926928 aattgcatttttaaggtttctag 15926950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 437 - 518
Target Start/End: Original strand, 33001920 - 33001999
Alignment:
Q  437 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    |||||||||||||||||||||||||| ||||||||||||  |||||||||| ||| ||||||||||||||||||||||||||    
T  33001920 ccaaacctcacataatcccttatttgtaaaaacgtttag--accgactttttaagagaaaatcccaattttcatcaacccaa 33001999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 670 - 855
Target Start/End: Original strand, 2364917 - 2365101
Alignment:
Q  670 ttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgagaccccattaaacataaggaaac 769  Q
    ||||| |||||||||||||||||||| |||||||| ||||||  | |||||||||||||||| |  ||| ||  ||||| ||||||||||  || || |     
T  2364917 ttgttatgtttcaaaataataaagtctctagaataattagtctttctaatggaacattaagtgtggcttaatcgtgagaacccattaaactaaatgacat 2365016  T
Q  770 tattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 855  Q
    |||||| ||| ||| ||||||||| | |||||| ||| || |||| ||||||| |||||||||||| |||| ||| ||||||||||    
T  2365017 tattcttaaaatattcgtagtcaa-ccttattgtgaaatgagataacattaaaacatagagactatcatgtgggtcgactgatgat 2365101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 282 - 403
Target Start/End: Original strand, 25123889 - 25124010
Alignment:
Q  282 agacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 381  Q
    ||||| ||||||||||||||| |  |||||||||| |||||||||||||| ||||||| ||||||||||||||||||||   |||| |||| |||||||     
T  25123889 agacaacatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatccgttttcgacgccgttttcactcacatgctcctaactcttaa 25123988  T
Q  382 ccctatcataatctacagaaaa 403  Q
    | ||||||||||  ||||||||    
T  25123989 cactatcataatgcacagaaaa 25124010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 282 - 403
Target Start/End: Complemental strand, 42057113 - 42056992
Alignment:
Q  282 agacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 381  Q
    ||||| ||||||||||||||| |  |||||||||| |||||||||||||| ||||||| |||||||| | ||||||||||| |||| |||| || |||||    
T  42057113 agacaacatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgtcgttttcacctacatgctcctaacacttag 42057014  T
Q  382 ccctatcataatctacagaaaa 403  Q
    | ||||||||||  ||||||||    
T  42057013 cactatcataatgcacagaaaa 42056992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 291 - 403
Target Start/End: Original strand, 3894477 - 3894589
Alignment:
Q  291 cagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcat 390  Q
    |||||||||||| | ||||||||||| |||||||||||||| ||||||| |||||||| ||||||||||||| | ||| | ||||  ||||||||||| |    
T  3894477 cagattttcaacctccacgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcacctacgtgtccatgacatttagccctatctt 3894576  T
Q  391 aatctacagaaaa 403  Q
    ||| |||||||||    
T  3894577 aatgtacagaaaa 3894589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 307 - 418
Target Start/End: Original strand, 370704 - 370815
Alignment:
Q  307 acgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattc 406  Q
    |||||||||| |||||||||||||| ||||||| |||||||| ||||||||| ||| |||| |||| || ||| || ||||||||||||||| ||| |||    
T  370704 acgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcgcctacatgctcctaacacttggcactatcataatctacaaaaatttc 370803  T
Q  407 aagtttcaacca 418  Q
    | ||||||||||    
T  370804 atgtttcaacca 370815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 311 - 518
Target Start/End: Complemental strand, 40554932 - 40554727
Alignment:
Q  311 tttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattcaagt 410  Q
    |||||| | ||||| |||||| ||||||| | ||| || || |||||| ||| ||   ||||||| ||| || ||||||||||||||||  | |||||||    
T  40554932 tttcgcacgtaaaattcaaaccgttaatcggattttgatgctgttttcgcctacactctcctgacacttggctctatcataatctacagctatttcaagt 40554833  T
Q  411 ttcaaccacccnnnnnnnntcgatttcc-aaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttca 509  Q
     ||||||||||        ||||||||| ||||||||||||||| ||| |||||||||||||||| || ||||||||||||||  |||| ||||||| ||    
T  40554832 ctcaaccaccccaaaa---tcgatttcccaaacctcacataatctcttgtttgcaaaaacgtttaaactccgacttttcaagcataaattccaatttcca 40554736  T
Q  510 tcaacccaa 518  Q
    |||||||||    
T  40554735 tcaacccaa 40554727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 282 - 403
Target Start/End: Complemental strand, 2190999 - 2190878
Alignment:
Q  282 agacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 381  Q
    ||||| ||||||||||||||| |  |||||||||| |||||||||||||| ||||||  |||||||| ||||||||| ||| |||| |||| || |||||    
T  2190999 agacagcatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaattcgttttcgatgccgttttcgcctacatgctcctaacacttag 2190900  T
Q  382 ccctatcataatctacagaaaa 403  Q
    | ||||||||||  ||||||||    
T  2190899 cactatcataatgcacagaaaa 2190878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 282 - 416
Target Start/End: Original strand, 3049018 - 3049154
Alignment:
Q  282 agacatcatcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactctta 380  Q
    ||||| |||||||||||| ||  |||||||||||||   |||||| ||||| ||||| |||||||||| ||||||||| ||| || | ||||||| ||||    
T  3049018 agacaacatcagattttccaattttcacgttttcgcgagtaaaaaccaaaccgttaacctgttttcgatgccgttttcgcctacacgctcctgacactta 3049117  T
Q  381 gccctatcataatctacag-aaaattcaagtttcaac 416  Q
    |||||||| |||| ||||| |||||||||||||||||    
T  3049118 gccctatcttaatgtacagaaaaattcaagtttcaac 3049154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 654 - 838
Target Start/End: Original strand, 39111819 - 39112002
Alignment:
Q  654 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgagacccca 753  Q
    |||||||||||| |||||||||| |||||||| |||||||||||||||||||  ||||||||||||| |||||||||||  |||| || |  ||||  |     
T  39111819 catttctttattaattttgttttatttcaaaa-aataaagtccctagaatagcgagtccgtttaatgaaacattaagtacgacttaatcacaagacatct 39111917  T
Q  754 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattat 838  Q
    ||||||||||||| ||||||   ||| ||| |  |||| |||||||||| |||  |  ||| |||||||  ||||||||||||||    
T  39111918 ttaaacataaggacactatttcaaaaatattcacagtccagctttattgtgaaacgaaataacattaaaatatagagactattat 39112002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 434 - 513
Target Start/End: Complemental strand, 10063199 - 10063120
Alignment:
Q  434 tttccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaa 513  Q
    |||| ||||||||||||||| || |||||||||||| |||||||| ||||| |||||||||||||| |||||||||||||    
T  10063199 tttcaaaacctcacataatcactcatttgcaaaaacatttagacatcgactcttcaagcgaaaatctcaattttcatcaa 10063120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 307 - 418
Target Start/End: Original strand, 13757987 - 13758098
Alignment:
Q  307 acgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattc 406  Q
    |||||||||| |||||||||||||| ||||||| |||||||| ||||||||| ||| |||| |||| || ||| || |||||||||| |||| ||| |||    
T  13757987 acgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcgcctacatgctcctaacacttggcactatcataatttacaaaaatttc 13758086  T
Q  407 aagtttcaacca 418  Q
    | ||||||||||    
T  13758087 atgtttcaacca 13758098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 81 - 240
Target Start/End: Complemental strand, 13866845 - 13866686
Alignment:
Q  81 caactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttg 180  Q
    |||| |||||||| |||||||||||||||||| ||||| |||||| |||||||| | ||||  | |||||||||||||||||||||||  || |||| ||    
T  13866845 caacgcaagaacttattagaccctttatacaaggttatctctttcataaaaacacccctagatgattaggataaagtccctacacttaaaaataagtgtg 13866746  T
Q  181 gaagcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagc 240  Q
    ||| |||||    ||||||||||||  |||| || |||||| ||  |||| |||||||||    
T  13866745 gaaacaatttagttgaagaaaaatgcattttaaaagtttctggtcagacaaaatcgtagc 13866686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 307 - 418
Target Start/End: Complemental strand, 14251537 - 14251426
Alignment:
Q  307 acgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattc 406  Q
    |||||||||| |||||||||||||| ||||||| |||||||| ||||||||| ||| |||| |||| || ||| || |||| |||||||||| ||| |||    
T  14251537 acgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcgcctacatgctcctaacacttggcactattataatctacaaaaatttc 14251438  T
Q  407 aagtttcaacca 418  Q
    | ||||||||||    
T  14251437 atgtttcaacca 14251426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 282 - 508
Target Start/End: Original strand, 37380484 - 37380708
Alignment:
Q  282 agacatcatcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactctta 380  Q
    ||||| |||||||||||| ||  ||||||||||||| | |||||  ||||| ||||| | |||||| | | ||||||| ||| |  | ||||||| ||||    
T  37380484 agacaacatcagattttctaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcaatgtcgttttcgcctacgcgctcctgacactta 37380583  T
Q  381 gccctatcataatctacag-aaaattcaag-tttcaaccacccnnnnnnnntcgatttcca-aacctcacataatcccttatttgcaaaaacgtttagac 477  Q
    || |||||||||||||||| |||||||||| ||||||||||||        |||||||||| ||||||||||| ||   | |||||||||||||| ||||    
T  37380584 gctctatcataatctacagaaaaattcaagttttcaaccaccc---aaaactcgatttccagaacctcacatactc---tgtttgcaaaaacgttgagac 37380677  T
Q  478 accgacttttcaagcgaaaatcccaattttc 508  Q
    ||||| ||||||||| || ||||||||||||    
T  37380678 accgagttttcaagcaaagatcccaattttc 37380708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 556 - 612
Target Start/End: Complemental strand, 2653331 - 2653275
Alignment:
Q  556 tgtttgaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  2653331 tgttggaataagccctaatagccaatctatattgattgggattggctttgtatcatg 2653275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 681 - 840
Target Start/End: Original strand, 7396221 - 7396381
Alignment:
Q  681 caaaataataaagtccctagaatagttagtccgtttaa-tggaacattaagtataactttattatgagaccccattaaacataaggaaactattctcaaa 779  Q
    |||||||| || ||| |||||||||||||| | ||||| ||||||||||||||| |||| ||  |||||||| |||||||||||| ||| |||||| |||    
T  7396221 caaaataaaaatgtcgctagaatagttagttcatttaaatggaacattaagtatgacttaatcttgagaccctattaaacataagaaaattattcttaaa 7396320  T
Q  780 gtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgt 840  Q
      ||  |||||||||| ||| || ||| |  |||   ||||||||||||||||||||||||    
T  7396321 acatatgtagtcaagccttagtgtgaaatacgatgatattaaagcatagagactattatgt 7396381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 556 - 612
Target Start/End: Complemental strand, 11543279 - 11543223
Alignment:
Q  556 tgtttgaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  11543279 tgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 11543223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 564 - 612
Target Start/End: Original strand, 12738451 - 12738499
Alignment:
Q  564 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  12738451 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 12738499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 101 - 223
Target Start/End: Original strand, 370348 - 370470
Alignment:
Q  101 ccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaa 200  Q
    ||||| |||||||| |||||||| | |||||||||| ||||    |||||||||||||| || |||||| || |||||||||| |||||||| | |||||    
T  370348 cccttaatacaaagctatttcttccataaaaacatccctagataattaggataaagtccttatacttataaataagtttggaaacaattggattaaagaa 370447  T
Q  201 aaatgtctttttaaggtttctag 223  Q
    || ||  ||||||||||||||||    
T  370448 aattgcatttttaaggtttctag 370470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 282 - 518
Target Start/End: Complemental strand, 21734867 - 21734630
Alignment:
Q  282 agacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 381  Q
    ||||| |||||||||||| || ||| ||||||| | |||||||| ||||| ||||| | |||||||| ||||||||| |||  | | ||||||  |||||    
T  21734867 agacagcatcagattttcgaccttctcgttttcacgcataaaaaccaaaccgttaacccgttttcgatgccgttttcgcctaaacgctcctgagacttag 21734768  T
Q  382 ccctatcataatctac-----agaaaattcaagtttcaaccacccnnnnnnnntcgattt-ccaaacctcacataatcccttatttgcaaaaacgtttag 475  Q
    | ||||||||||||||     | ||||||||||||||||||| ||        ||||||| ||||| ||||||| ||| ||||||||| |||||| || |    
T  21734767 ctctatcataatctaccgaaaaaaaaattcaagtttcaaccaacc----aaaatcgatttcccaaaactcacatgatctcttatttgc-aaaacg-ttgg 21734674  T
Q  476 acaccgacttttcaagc-gaaaatcccaattttcatcaacccaa 518  Q
    ||||| ||||||||| |  ||||||||||||||||| |||||||    
T  21734673 acaccaacttttcaaacataaaatcccaattttcattaacccaa 21734630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 437 - 518
Target Start/End: Complemental strand, 8756440 - 8756359
Alignment:
Q  437 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    ||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||  ||||  |||||| |||| ||||||    
T  8756440 ccaaacctcacataatctcttgtttgcaaaaacgtttagactccgacttttcaagcataaattacaatttccatcgacccaa 8756359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 438 - 518
Target Start/End: Original strand, 29004831 - 29004909
Alignment:
Q  438 caaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    ||||||||||||| || ||||||||||||  |||||||||||||||||||||||  |||||| |||||||||| |||||||    
T  29004831 caaacctcacatagtctcttatttgcaaa--cgtttagacaccgacttttcaaggaaaaatctcaattttcattaacccaa 29004909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 556 - 612
Target Start/End: Complemental strand, 11536361 - 11536305
Alignment:
Q  556 tgtttgaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    |||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  11536361 tgttggaataagccctaatagccactctatattgattggttttggctttgtatcatg 11536305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 564 - 612
Target Start/End: Original strand, 12750741 - 12750789
Alignment:
Q  564 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  12750741 taagccctaatagctaatctatattgattgggtttggctttgtatcatg 12750789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 564 - 612
Target Start/End: Original strand, 15152358 - 15152406
Alignment:
Q  564 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  15152358 taagccctaatagccaatctatattgattgggtttggttttgtatcatg 15152406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 307 - 418
Target Start/End: Complemental strand, 18980659 - 18980548
Alignment:
Q  307 acgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattc 406  Q
    |||||||||| ||| |||||||||| |||||||  ||||||| || |||||||||| |||| |||| || ||| || ||||||||||||||| ||| |||    
T  18980659 acgttttcgcgcattaaaatcaaaccgttaatccattttcgatgcagttttcacctacatgctcctaacacttggcactatcataatctacaaaaatttc 18980560  T
Q  407 aagtttcaacca 418  Q
    | ||| ||||||    
T  18980559 atgttccaacca 18980548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 564 - 611
Target Start/End: Original strand, 29327698 - 29327745
Alignment:
Q  564 taagccctaatagccaatctatattgattgggtttggctttgtatcat 611  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  29327698 taagccctaatagccaatctatattgattgggtttggttttgtatcat 29327745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 309 - 418
Target Start/End: Original strand, 15927186 - 15927296
Alignment:
Q  309 gttttcgctcataaaaatcaaacagttaatctgttttcgacgccg-ttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattca 407  Q
    |||||||| |||||||||||||| ||||||| |||||||| |||| ||||| ||| |||| |||| |  ||| || ||||||||||||||| ||| ||||    
T  15927186 gttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgtttttcgcctacatgctcctaatacttggcactatcataatctacaaaaatttca 15927285  T
Q  408 agtttcaacca 418  Q
     ||||||||||    
T  15927286 tgtttcaacca 15927296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 282 - 403
Target Start/End: Complemental strand, 15525389 - 15525268
Alignment:
Q  282 agacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 381  Q
    ||||| ||||||||||||||| |  |||||||||| |||||||||||||| ||||||| |||| | | ||||||||| ||| |||  |||| || |||||    
T  15525389 agacagcatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatccgtttgcaatgccgttttcgcctacattctcctaacacttag 15525290  T
Q  382 ccctatcataatctacagaaaa 403  Q
      ||||||||||  ||||||||    
T  15525289 tactatcataatgcacagaaaa 15525268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 455 - 511
Target Start/End: Complemental strand, 8249520 - 8249465
Alignment:
Q  455 cttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatc 511  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||    
T  8249520 cttatttgcaaaa-cgtttagacaccgacttttcaaacgaaaatcccaatttccatc 8249465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 292 - 404
Target Start/End: Complemental strand, 10063316 - 10063204
Alignment:
Q  292 agattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcata 391  Q
    ||||||||| | ||||||||||||| | |||||||| ||| ||||| | |||||||| ||||||||||||| |    ||||||| |||||| |||||| |    
T  10063316 agattttcacccttcacgttttcgcgcctaaaaatcgaaccgttaacccgttttcgatgccgttttcacctacgcactcctgacacttagctctatcaca 10063217  T
Q  392 atctacagaaaat 404  Q
    ||||||| |||||    
T  10063216 atctacataaaat 10063204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 434 - 518
Target Start/End: Original strand, 13898230 - 13898313
Alignment:
Q  434 tttccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    |||||||||||||||||||| ||||||||| |||||||||| ||  ||||||||||| ||||||  ||||||| |||| ||||||    
T  13898230 tttccaaacctcacataatctcttatttgc-aaaacgtttatacttcgacttttcaaacgaaaactccaatttccatcgacccaa 13898313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 564 - 612
Target Start/End: Original strand, 15148057 - 15148105
Alignment:
Q  564 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  15148057 taagccctaatagccaatctatattaattgggtttggttttgtatcatg 15148105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 109 - 192
Target Start/End: Original strand, 13757640 - 13757723
Alignment:
Q  109 acaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattgga 192  Q
    |||| |||| ||||||| |||||| | | ||||  | ||||||||||||||||||||||| ||||||||||||||| |||||||    
T  13757640 acaaggttaattctttcataaaaatacccctagatgattaggataaagtccctacacttaggaagaagtttggaagtaattgga 13757723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 311 - 418
Target Start/End: Original strand, 28720332 - 28720439
Alignment:
Q  311 tttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattcaagt 410  Q
    |||||| | ||||| |||||| ||||||| | ||| || ||||||||| ||| || | ||||||| ||| || ||||||||||||||||||| |||||||    
T  28720332 tttcgcgcgtaaaattcaaaccgttaatcggattttgatgccgttttcgcctacacgctcctgacacttggctctatcataatctacagaaatttcaagt 28720431  T
Q  411 ttcaacca 418  Q
     |||||||    
T  28720432 ctcaacca 28720439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 282 - 403
Target Start/End: Original strand, 4280728 - 4280849
Alignment:
Q  282 agacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 381  Q
    ||||| |||||||||||| || ||||||||||||| | |||||| | ||| ||||| | |||||||| ||||||||| ||| || | || |||  | |||    
T  4280728 agacagcatcagattttcgaccttcacgttttcgcgcgtaaaaacccaaccgttaacccgttttcgatgccgttttcgcctacacgctcatgagacatag 4280827  T
Q  382 ccctatcataatctacagaaaa 403  Q
    | |||||||||||||| |||||    
T  4280828 ctctatcataatctaccgaaaa 4280849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 698 - 763
Target Start/End: Original strand, 10234179 - 10234244
Alignment:
Q  698 tagaatagttagtccgtttaatggaacattaagtataactttattatgagaccccattaaacataa 763  Q
    ||||||||||||||||||||||| | |||||| |||||||| || ||||||  |||||||||||||    
T  10234179 tagaatagttagtccgtttaatgaaccattaaatataacttaatcatgagattccattaaacataa 10234244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 443 - 515
Target Start/End: Original strand, 48744297 - 48744369
Alignment:
Q  443 ctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacc 515  Q
    |||||||| || ||||||||||| ||||||||||| ||||||||||||||  |||  ||||||||||| ||||    
T  48744297 ctcacatagtctcttatttgcaagaacgtttagactccgacttttcaagcataaactccaattttcatgaacc 48744369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 564 - 611
Target Start/End: Original strand, 13392038 - 13392085
Alignment:
Q  564 taagccctaatagccaatctatattgattgggtttggctttgtatcat 611  Q
    |||||||||||| ||||||||||||||||| ||||| |||||||||||    
T  13392038 taagccctaatatccaatctatattgattgtgtttgactttgtatcat 13392085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 319 - 518
Target Start/End: Complemental strand, 21734270 - 21734071
Alignment:
Q  319 ataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctac----agaaaattcaagtttca 414  Q
    ||||||| ||||| ||||| | |||||||| ||||||||| |||  | | ||||||  |||||| ||||||||||||||    | |||||||||||||||    
T  21734270 ataaaaaccaaaccgttaacccgttttcgatgccgttttcgcctaaacgctcctgagacttagctctatcataatctaccgaaaaaaaattcaagtttca 21734171  T
Q  415 accacccnnnnnnnntcgattt-ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagc-gaaaatcccaattttcatca 512  Q
    |||| ||        ||||||| ||||| ||||||| ||| ||||||||| |||||| || |||||| ||||||||| |  ||||||||||||||||| |    
T  21734170 accaacc----aaaatcgatttcccaaaactcacatgatctcttatttgc-aaaacg-ttggacaccaacttttcaaacataaaatcccaattttcatta 21734077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 288 - 388
Target Start/End: Complemental strand, 13866573 - 13866472
Alignment:
Q  288 catcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagcccta 386  Q
    |||||||||||| ||  ||||||||||||| | |||||| ||||| ||||| |||||||||| | ||||||| ||| || | ||||||| |||||| |||    
T  13866573 catcagattttccaattttcacgttttcgcgcgtaaaaaccaaaccgttaaactgttttcgatgtcgttttcgcctacacgctcctgacacttagctcta 13866474  T
Q  387 tc 388  Q
    ||    
T  13866473 tc 13866472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 555 - 612
Target Start/End: Complemental strand, 18258144 - 18258087
Alignment:
Q  555 ctgtttgaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    ||||| || |||||||| |||||||||||| ||||||||| |||||| ||||||||||    
T  18258144 ctgttggagtaagccctgatagccaatctagattgattggttttggccttgtatcatg 18258087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 233 - 274
Target Start/End: Complemental strand, 42057230 - 42057189
Alignment:
Q  233 atcgtagcacgttggtctcccatcgtggcacgatttttccag 274  Q
    ||||| |||||||||| |||||||||||||||||||||||||    
T  42057230 atcgtggcacgttggtttcccatcgtggcacgatttttccag 42057189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 648 - 680
Target Start/End: Complemental strand, 2653239 - 2653207
Alignment:
Q  648 acaaggcatttctttattgattttgttttgttt 680  Q
    |||||||||||||||||||||||||||||||||    
T  2653239 acaaggcatttctttattgattttgttttgttt 2653207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 205
Target Start/End: Original strand, 3048788 - 3048884
Alignment:
Q  109 acaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatg 205  Q
    |||| |||| ||||||| |||||||| |  |||  | |||||||||||||||||||||||  || |||||||||| ||||| |  ||||||||||||    
T  3048788 acaaggttaattctttcataaaaacacccttagatgattaggataaagtccctacacttaaaaataagtttggaaacaatttggttgaagaaaaatg 3048884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 722 - 765
Target Start/End: Original strand, 3132748 - 3132791
Alignment:
Q  722 aacattaagtataactttattatgagaccccattaaacataagg 765  Q
    |||||||||| |||||| ||| ||||||||||||||||||||||    
T  3132748 aacattaagtgtaacttaattgtgagaccccattaaacataagg 3132791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #92
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 141
Target Start/End: Complemental strand, 38898281 - 38898230
Alignment:
Q  90 aactcattagaccctttatacaaagttatttctttcctaaaaacatctctag 141  Q
    ||||| |||||||| ||||||||  ||||||||||| |||||||||||||||    
T  38898281 aactcgttagacccattatacaacattatttctttcataaaaacatctctag 38898230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #93
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 109 - 223
Target Start/End: Complemental strand, 18981007 - 18980893
Alignment:
Q  109 acaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatgtct 208  Q
    |||| |||| ||||| | |||||||| | ||||  | ||||||||||||||||| || ||  || |||||||||| ||||||||   ||||||| ||  |    
T  18981007 acaaggttaattcttccataaaaacacccctagatgattaggataaagtccctatacatagaaataagtttggaaacaattggatcaaagaaaattgcat 18980908  T
Q  209 ttttaaggtttctag 223  Q
    |||||||||||||||    
T  18980907 ttttaaggtttctag 18980893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 246; Significance: 1e-136; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 54 - 518
Target Start/End: Complemental strand, 40886 - 40423
Alignment:
Q  54 aacaactttctttcctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggata 153  Q
    |||||||| | ||||||||||| ||||||||||| ||||||||| |||||||||||||| |||||||| |||||||||||||||||||  ||||||||||    
T  40886 aacaacttccattcctaccccaaggaccaactcatgaactcattggaccctttatacaacgttatttccttcctaaaaacatctctagatggttaggata 40787  T
Q  154 aagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctccc 253  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||  |||||||||||||| |  |||||||||||| |||||||||||||||    
T  40786 aagtccctacacttaggaagaagtttggaagcaattggagtgaagaaaattgcatttttaaggtttcttggatgacagaatcgtggcacgttggtctccc 40687  T
Q  254 atcgtggcacgatttttccagcatctctagacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccg 353  Q
    |||||||||||||||||||||  ||   ||||  | ||||||||||||| ||||||||||||| |||||||||||||| ||||| | |||||||| ||||    
T  40686 atcgtggcacgatttttccagattcgacagacgacttcagattttcaaccttcacgttttcgcacataaaaatcaaaccgttaacccgttttcgatgccg 40587  T
Q  354 ttttcacctgcatgttcctgactcttagccctatcataatctacagaaa-attcaagtttcaaccacccnnnnnnnntcgatttcc-aaacctcacataa 451  Q
    ||||| |||  | | ||||||| |||||| ||||||||||||||| ||| |||||||||||||||||||        ||||||||| |||||||||||||    
T  40586 ttttcgcctaaacgctcctgacacttagctctatcataatctacaaaaagattcaagtttcaaccaccc---aaaaatcgatttccaaaacctcacataa 40490  T
Q  452 tcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    || |||||||||| |||||||||||||| ||||  ||||||||||||||||||||||||||||||||    
T  40489 tcacttatttgcataaacgtttagacactgactactcaagcgaaaatcccaattttcatcaacccaa 40423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 341 - 518
Target Start/End: Original strand, 25797 - 25973
Alignment:
Q  341 gttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaa-ttcaagtttcaaccacccnnnnnnnntcgatttcc- 438  Q
    ||||||||  |||||||| ||| || | ||||||| |||||| |||||||| |||| |||||| ||||||||||||||||||        |||||||||     
T  25797 gttttcgataccgttttcgcctacacgctcctgacacttagctctatcatattctatagaaaaattcaagtttcaaccacccaaaaa---tcgatttccc 25893  T
Q  439 aaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||| ||||||| |||| ||||||    
T  25894 aaacctcacataatctcttatttgcaaaaacgtttagactccgacttttcaagcgtaaattccaatttccatcgacccaa 25973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 225; Significance: 1e-123; HSPs: 55)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 225; E-Value: 1e-123
Query Start/End: Original strand, 54 - 511
Target Start/End: Complemental strand, 8952713 - 8952257
Alignment:
Q  54 aacaactttctttcctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggata 153  Q
    |||||||| | |||||||||||  |||||||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||    
T  8952713 aacaacttccattcctaccccaatgaccaactcatgaactaattagaccctttatacaacgttatttctttcctaaaaacatctctagatggttaggata 8952614  T
Q  154 aagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctccc 253  Q
    |||||| |||||||| ||||||||||||||||| ||||||||||||||| ||  |||||||||||||| || |||||  ||||| |||||||||||||||    
T  8952613 aagtccatacacttaggaagaagtttggaagcatttggagtgaagaaaattgcatttttaaggtttctggtatgacatcatcgtggcacgttggtctccc 8952514  T
Q  254 atcgtggcacgatttttccagcat-ctctagacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgcc 352  Q
    ||||||||||||||||||||| ||     ||||| |||||||||| |||| ||||||||||||| |||||||| ||||| ||||| | |||||||| |||    
T  8952513 atcgtggcacgatttttccagaataggacagacaacatcagatttccaaccttcacgttttcgcgcataaaaaccaaaccgttaacccgttttcgatgcc 8952414  T
Q  353 gttttcacctgcatgttcctgactcttagccctatcataatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgattt-ccaaacctcacata 450  Q
    |||||| ||| || | ||||||| |||||| |||||||||||||||| |||||||||||||||||||||         ||||||| ||||||||||||||    
T  8952413 gttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaattcaagtttcaaccacc---taaaaatcgatttcccaaacctcacata 8952317  T
Q  451 atcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatc 511  Q
    ||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||    
T  8952316 atctcttatttgc-aaaacgtttagacaccgacttttcaaacgaaaatcccaatttccatc 8952257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 84 - 518
Target Start/End: Original strand, 40726097 - 40726529
Alignment:
Q  84 ctcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaa 183  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||||    
T  40726097 ctcaacaactcattagaccctttatacaaggttatttctttcctaaaaacatctctagatggttaggataaagtccctacacttaggaagaagtttggaa 40726196  T
Q  184 gcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgatttttccagcatctctag 283  Q
    ||| ||||||||||| ||| ||  |||||| ||||||| |  ||||| |||||| ||||||||||||||||||||||||||||||||||||  ||   ||    
T  40726197 gcatttggagtgaaggaaattgcatttttagggtttcttggatgacaaaatcgtggcacgttggtctcccatcgtggcacgatttttccagattcgacag 40726296  T
Q  284 acatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagcc 383  Q
    ||  | ||||||||||||| |||||||||||||||||||||| ||||| ||||| | |||||||| ||||||||| |||  | | ||||||| |||||||    
T  40726297 acgacttcagattttcaaccttcacgttttcgctcataaaaaccaaaccgttaacccgttttcgatgccgttttcgcctaaacgctcctgacacttagcc 40726396  T
Q  384 ctatcataatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgatttcc-aaacctcacataatcccttatttgcaaaaacgtttagacaccg 481  Q
    ||||||||||||| || ||||||||||||| ||||||||        ||| ||||| ||||||||||||||| ||||||||| |||||||||||||||||    
T  40726397 ctatcataatctatagaaaaattcaagtttaaaccaccc---aaaaatcggtttccaaaacctcacataatcacttatttgc-aaaacgtttagacaccg 40726492  T
Q  482 acttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    | | ||||||||||||| ||| |||||||||||||||    
T  40726493 aatcttcaagcgaaaattccagttttcatcaacccaa 40726529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 184; E-Value: 4e-99
Query Start/End: Original strand, 648 - 855
Target Start/End: Complemental strand, 24695673 - 24695466
Alignment:
Q  648 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgag 747  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  24695673 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 24695574  T
Q  748 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 847  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  24695573 accccattaaacataatgaaactattctaaaagtatccgtagtcaagctttattgagaagtgagatatcaataaagcatagagactattatgtaggtaga 24695474  T
Q  848 ctgatgat 855  Q
    ||||||||    
T  24695473 ctgatgat 24695466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 648 - 855
Target Start/End: Complemental strand, 18570070 - 18569863
Alignment:
Q  648 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgag 747  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||||    
T  18570070 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaattgaacattaagtataacttaattgtgag 18569971  T
Q  748 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 847  Q
    ||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||    
T  18569970 accccgttaaacataaggaaactactcttaaagtatccgtagtcaagctttattgagaagtggaatatcattaaagcataaagactattatgttggtaga 18569871  T
Q  848 ctgatgat 855  Q
    ||||||||    
T  18569870 ctgatgat 18569863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 162; E-Value: 5e-86
Query Start/End: Original strand, 650 - 855
Target Start/End: Complemental strand, 19714703 - 19714498
Alignment:
Q  650 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgagac 749  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  19714703 aaggcatttctttattgattttgttttatttcaaagtaataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 19714604  T
Q  750 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 849  Q
    ||| |||||||||||||| ||||||| ||| |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  19714603 cccgttaaacataaggaatctattcttaaaatatccgaagtcaagctttattgagaagtaggatatcattaaagcatagagactattatgtgggtagact 19714504  T
Q  850 gatgat 855  Q
    ||||||    
T  19714503 gatgat 19714498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 154; E-Value: 3e-81
Query Start/End: Original strand, 654 - 855
Target Start/End: Complemental strand, 19707419 - 19707218
Alignment:
Q  654 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgagacccca 753  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||     
T  19707419 catttctttattgattttgttttatttcaaagtaataaagtccctagaatagttagtcagtttaatggaacattaagtataacttaattgtgagaccccg 19707320  T
Q  754 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 853  Q
    |||||||||||||| ||||||| ||| |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  19707319 ttaaacataaggaatctattcttaaaatatccgaagtcaagctttattgagaagtaggatatcattaaagcatagagactattatgtgggtagactgatg 19707220  T
Q  854 at 855  Q
    ||    
T  19707219 at 19707218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 65 - 274
Target Start/End: Complemental strand, 22007614 - 22007406
Alignment:
Q  65 ttcctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctaca 164  Q
    ||||||||||| |||||| |||| |||||||||||||||||||||||| ||||| |||||||||||||||||||||   |||||||||||||||||||||    
T  22007614 ttcctaccccaaggacca-ctcatgaactcattagaccctttatacaacgttatatctttcctaaaaacatctctatatggttaggataaagtccctaca 22007516  T
Q  165 cttatgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacg 264  Q
    |||| ||| ||||||||||||| ||||||||||||||| || ||||||||||||| | |  |||||| ||||| |||||||||||||||| |||||||||    
T  22007515 cttaggaaaaagtttggaagcatttggagtgaagaaaattgcctttttaaggtttattggatgacagcatcgtggcacgttggtctcccaccgtggcacg 22007416  T
Q  265 atttttccag 274  Q
    ||||||||||    
T  22007415 atttttccag 22007406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 54 - 205
Target Start/End: Complemental strand, 22357619 - 22357468
Alignment:
Q  54 aacaactttctttcctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggata 153  Q
    |||||||| | ||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||    
T  22357619 aacaacttccattcctaccccaaggaccaactcatgaactcattagaccctttatacaacgttatttctttcctaaaaacatctctagatggttaggata 22357520  T
Q  154 aagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatg 205  Q
    ||||||||||||||| ||||||||||||| ||| ||||||||||||||||||    
T  22357519 aagtccctacacttaggaagaagtttggaggcatttggagtgaagaaaaatg 22357468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 81 - 274
Target Start/End: Original strand, 21109060 - 21109253
Alignment:
Q  81 caactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttg 180  Q
    |||| |||||||||| |||||||||| |||||||||||||||||| ||||| || | ||||  |||||||||||| |||||||||||| ||| |||||||    
T  21109060 caacacaagaactcactagaccctttgtacaaagttatttctttcataaaatcacccctagatggttaggataaattccctacacttaggaataagtttg 21109159  T
Q  181 gaagcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgatttttccag 274  Q
    ||| ||||||||  |||||||| ||  |||||||||||||| || |||||| ||||| |||||||||||| |||||||||||||||||||||||    
T  21109160 gaaacaattggatcgaagaaaattgcatttttaaggtttcttgtctgacagcatcgtggcacgttggtcttccatcgtggcacgatttttccag 21109253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 55 - 202
Target Start/End: Complemental strand, 21406345 - 21406198
Alignment:
Q  55 acaactttctttcctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataa 154  Q
    ||||||||| ||| |||||||  ||| | |||| |||||||||||||||||||||||| |||||||||||||||||||||| |||||  |||||||||||    
T  21406345 acaactttcattcataccccaaagacaagctcacgaactcattagaccctttatacaaggttatttctttcctaaaaacatttctagatggttaggataa 21406246  T
Q  155 agtccctacacttatgaagaagtttggaagcaattggagtgaagaaaa 202  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||    
T  21406245 agtccctacacttaggaagaagtttggaagcaattggagtgaagaaaa 21406198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 68 - 202
Target Start/End: Original strand, 23539182 - 23539316
Alignment:
Q  68 ctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacactt 167  Q
    ||||||||  |||||||||| ||||||||||| |||||||||||| |||||||||| |||||||||||||||||  ||||||||||||||||||||||||    
T  23539182 ctaccccaaagaccaactcatgaactcattagcccctttatacaaggttatttcttacctaaaaacatctctagatggttaggataaagtccctacactt 23539281  T
Q  168 atgaagaagtttggaagcaattggagtgaagaaaa 202  Q
    | |||||||||||||||||||||||||||||||||    
T  23539282 aggaagaagtttggaagcaattggagtgaagaaaa 23539316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 80 - 205
Target Start/End: Original strand, 10817167 - 10817292
Alignment:
Q  80 ccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagttt 179  Q
    |||||||| ||||||||||| |||||||||||| |||||||||| |||||||||||||||||  ||||||||||||||||||||||||| ||||||||||    
T  10817167 ccaactcatgaactcattagcccctttatacaaggttatttcttacctaaaaacatctctagatggttaggataaagtccctacacttaggaagaagttt 10817266  T
Q  180 ggaagcaattggagtgaagaaaaatg 205  Q
    |||||||||||||| |||||||||||    
T  10817267 ggaagcaattggagcgaagaaaaatg 10817292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 81 - 274
Target Start/End: Original strand, 22111309 - 22111502
Alignment:
Q  81 caactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctc-tagtcggttaggataaagtccctacacttatgaagaagttt 179  Q
    |||| ||||||||||||||||||||| |||||| ||||||||||| ||||| || | | |||  ||||||||||||||||| ||||||| ||| ||||||    
T  22111309 caacacaagaactcattagaccctttgtacaaa-ttatttctttcataaaatcaccccctagatggttaggataaagtcccgacacttaggaataagttt 22111407  T
Q  180 ggaagcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgatttttccag 274  Q
    |||| |||||||| | ||||||| ||  |||||||||||||| || ||| | |||||| ||||||||||||||||||||||||| ||||||||||    
T  22111408 ggaaacaattggattaaagaaaattgcatttttaaggtttcttgtctgatataatcgtggcacgttggtctcccatcgtggcacaatttttccag 22111502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 67 - 202
Target Start/End: Complemental strand, 1857196 - 1857063
Alignment:
Q  67 cctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacact 166  Q
    ||||||||| |||||| |||| ||||||||||||||||| |||||| ||||| |||||||||||||||||||||  || |||||||||||||||||||||    
T  1857196 cctaccccaaggacca-ctcatgaactcattagaccctt-atacaacgttatatctttcctaaaaacatctctatacgtttaggataaagtccctacact 1857099  T
Q  167 tatgaagaagtttggaagcaattggagtgaagaaaa 202  Q
    || ||||||||||||||||| |||||||||||||||    
T  1857098 taggaagaagtttggaagcatttggagtgaagaaaa 1857063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 653 - 836
Target Start/End: Complemental strand, 27347679 - 27347497
Alignment:
Q  653 gcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgagacccc 752  Q
    |||||||||| |||||||||||||| |||||||||||||||||| ||||||| ||| || |||||||||| |||||||| | |||| ||  ||||| |||    
T  27347679 gcatttctttgttgattttgttttgattcaaaataataaagtccttagaataattaatctgtttaatggagcattaagtgtgacttaatcgtgaga-ccc 27347581  T
Q  753 attaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactatt 836  Q
    |||||||  ||||| | |||||| |||||||  ||||||||||||||||| |||  |||||| |||||||||||||||||||||    
T  27347580 attaaacgaaaggacattattcttaaagtatatgtagtcaagctttattgtgaaaagggataacattaaagcatagagactatt 27347497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 101 - 274
Target Start/End: Original strand, 21204112 - 21204285
Alignment:
Q  101 ccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaa 200  Q
    ||||| |||||||| |||||||| | |||||||||| ||||  | ||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||    
T  21204112 cccttaatacaaagctatttcttccataaaaacatccctagatgattaggataaagtccctacacttaggaagaagtttggaaccaattggagcgaagaa 21204211  T
Q  201 aaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgatttttccag 274  Q
    || ||  ||||| |||||| | ||   |||| ||||| |||||||||| |||||||||||||||||||||||||    
T  21204212 aattgcatttttgaggtttttggtcaaacagcatcgtggcacgttggtttcccatcgtggcacgatttttccag 21204285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 283 - 518
Target Start/End: Complemental strand, 18318650 - 18318416
Alignment:
Q  283 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 382  Q
    |||| ||||||||||||| | ||||||||||||| | |||||||||||| ||||| |||||||||| ||||||||| ||| |  | ||||||| ||||||    
T  18318650 gacagcatcagattttcacccttcacgttttcgcgcctaaaaatcaaaccgttaacctgttttcgatgccgttttcgcctacgcgctcctgacacttagc 18318551  T
Q  383 cctatcataatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgatttcc-aaacctcacataatcccttatttgcaaaaacgtttagacacc 480  Q
     |||||| ||||||  | ||||||| ||||||||||||||        ||| ||||| ||||||||||||||| || |||||||||||  ||||||||||    
T  18318550 tctatcacaatctaaggaaaaattccagtttcaaccaccc---aaaaatcggtttccaaaacctcacataatcactcatttgcaaaaatatttagacacc 18318454  T
Q  481 gacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    |||| || |||||||||||| |||||| ||||||||||    
T  18318453 gactctttaagcgaaaatcctaatttttatcaacccaa 18318416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 288 - 518
Target Start/End: Complemental strand, 22777508 - 22777279
Alignment:
Q  288 catcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagcccta 386  Q
    |||||||||||| ||  ||||||||||||| ||||||| |||||| ||||  | |||||||| ||||||||| ||| || | || |||| |||| | |||    
T  22777508 catcagattttctaattttcacgttttcgcgcataaaattcaaactgttatcccgttttcgatgccgttttcgcctacacgctcatgacacttaactcta 22777409  T
Q  387 tcataatctacagaaa-attcaagtttcaaccacccnnnnnnnntcgatttcc-aaacctcacataatcccttatttgcaaaaacgtttagacaccgact 484  Q
    |||||||||||||||| ||||||||||||||| |||        ||||||||| ||||||||||||||| ||||||||||||| |||||||||||| | |    
T  22777408 tcataatctacagaaagattcaagtttcaaccgcccaaaaa---tcgatttcccaaacctcacataatctcttatttgcaaaa-cgtttagacacctatt 22777313  T
Q  485 tttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    |||||| ||||||||||||||| |||||||||||    
T  22777312 tttcaaacgaaaatcccaatttccatcaacccaa 22777279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 67 - 202
Target Start/End: Complemental strand, 21675164 - 21675031
Alignment:
Q  67 cctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacact 166  Q
    ||||||||| |||||| |||| ||||||||||||||||| |||||| ||||| |||||||||||||||||||||  || |||||||||| ||||||||||    
T  21675164 cctaccccaaggacca-ctcatgaactcattagaccctt-atacaacgttatatctttcctaaaaacatctctatacgtttaggataaattccctacact 21675067  T
Q  167 tatgaagaagtttggaagcaattggagtgaagaaaa 202  Q
    || ||||||||||||||||| |||||||||||||||    
T  21675066 taggaagaagtttggaagcatttggagtgaagaaaa 21675031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 289 - 421
Target Start/End: Original strand, 21109334 - 21109467
Alignment:
Q  289 atcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatc 388  Q
    |||||||||||||| ||||||||||||| |||||| ||||||| |||||||||||||||| | ||||||||||| |||||||||||| ||||||||||||    
T  21109334 atcagattttcaaccttcacgttttcgcgcataaatatcaaaccgttaatctgttttcgatgtcgttttcacctacatgttcctgacacttagccctatc 21109433  T
Q  389 ataatctacag-aaaattcaagtttcaaccaccc 421  Q
    | ||| ||||| |||||| |||||||||| ||||    
T  21109434 acaatgtacagaaaaattgaagtttcaacaaccc 21109467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 440 - 556
Target Start/End: Complemental strand, 21405920 - 21405814
Alignment:
Q  440 aacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaatgtaacccaaccccaaaactg 539  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          ||| |||||||||||||||    
T  21405920 aacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcat----------taatccaaccccaaaactg 21405831  T
Q  540 gttctaatcattgtact 556  Q
    |||||||||||||||||    
T  21405830 gttctaatcattgtact 21405814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 654 - 855
Target Start/End: Complemental strand, 22547217 - 22547016
Alignment:
Q  654 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgagacccca 753  Q
    ||||| |||||| |||||||||| ||| |||||||||||  | ||| ||||||||||| |||||||||||||||||||||||||| ||  ||||| | ||    
T  22547217 catttatttattcattttgttttattttaaaataataaaaccgctataatagttagtcggtttaatggaacattaagtataacttaatcgtgagatctca 22547118  T
Q  754 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 853  Q
    ||||| ||| ||| | |||| | ||||||| || |||||| |||||||| |||||| |||| |||||||  |||||||||||||||| | ||||| ||||    
T  22547117 ttaaatatatggacattatttttaaagtattcgcagtcaaactttattgtgaagtgagataacattaaaatatagagactattatgtggatagaccgatg 22547018  T
Q  854 at 855  Q
    ||    
T  22547017 at 22547016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 65 - 221
Target Start/End: Complemental strand, 20766016 - 20765860
Alignment:
Q  65 ttcctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctaca 164  Q
    |||| ||||||  |||||||||| |||||||||||||||||||||||| ||||| || |||||||||||||||||||  |||||||||||| | | ||||    
T  20766016 ttccaaccccaaagaccaactcatgaactcattagaccctttatacaaggttatctccttcctaaaaacatctctagatggttaggataaaattcttaca 20765917  T
Q  165 cttatgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggtttct 221  Q
    |||| |||||| | ||||| || ||||||||||||||| ||  ||||||||||||||    
T  20765916 cttaagaagaaatctggaaacatttggagtgaagaaaattgcatttttaaggtttct 20765860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 65 - 219
Target Start/End: Complemental strand, 18318965 - 18318813
Alignment:
Q  65 ttcctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctaca 164  Q
    |||||||||||  |||||||||| |||||||||||||||||||||||| ||||| || ||||||||||||||||| |  |||||||||||||| || |||    
T  18318965 ttcctaccccaaagaccaactcatgaactcattagaccctttatacaaggttatctccttcctaaaaacatctctggatggttaggataaagttccgaca 18318866  T
Q  165 cttatgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggttt 219  Q
    |||| ||||||   |||||||| ||||||||||||||| ||  ||||||||||||    
T  18318865 cttaagaagaa--atggaagcatttggagtgaagaaaattgcatttttaaggttt 18318813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 304 - 501
Target Start/End: Complemental strand, 21297781 - 21297585
Alignment:
Q  304 ttcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaa 403  Q
    |||| |||||||| |||||||  ||||| ||||| | |||||||| | ||||||| ||| || | ||||||| |||||| |||||||||||| |||||||    
T  21297781 ttcatgttttcgcgcataaaatccaaactgttaacccgttttcgatgtcgttttcgcctacacgctcctgacacttagctctatcataatctccagaaaa 21297682  T
Q  404 -ttcaagtttcaaccacccnnnnnnnntcgatttcca-aacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatccc 501  Q
     || |||||||||||||||        |||||||||| ||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  21297681 attaaagtttcaaccacccaaaaa---tcgatttccagaaccttacataatcacttatttgcaaaaacgtttagacagcgacttttcaagcgaaaatccc 21297585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 304 - 499
Target Start/End: Complemental strand, 21311324 - 21311130
Alignment:
Q  304 ttcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaa 403  Q
    |||| |||||||| |||||||  ||||| ||||| | |||||||| ||||||||| |||  | | ||||||| |||||| ||||||||||||||||||||    
T  21311324 ttcatgttttcgcgcataaaatccaaaccgttaacccgttttcgatgccgttttcgcctatacgctcctgacacttagctctatcataatctacagaaaa 21311225  T
Q  404 -ttcaagtttcaaccacccnnnnnnnntcgatttcca-aacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatc 499  Q
     || ||||||| |||||||        |||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||    
T  21311224 attaaagtttcgaccacccaaaaa---tcgatttccagaacctcacataatcacttatttgcaaaaacttttagacaccgacttttcaagtgaaaatc 21311130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 281 - 415
Target Start/End: Original strand, 22111575 - 22111710
Alignment:
Q  281 tagacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactctta 380  Q
    |||||| ||||||||||||||| ||||||||||||| |||||||||||| | |||||||||||||||| ||||||||||||  |||||| ||| | ||||    
T  22111575 tagacagcatcagattttcaaccttcacgttttcgcacataaaaatcaatccgttaatctgttttcgatgccgttttcacccacatgtttctggcactta 22111674  T
Q  381 gccctatcataatctacag-aaaattcaagtttcaa 415  Q
    || |||||||||| || || ||||||||||||||||    
T  22111675 gcactatcataatgtatagaaaaattcaagtttcaa 22111710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 282 - 518
Target Start/End: Complemental strand, 22357347 - 22357113
Alignment:
Q  282 agacatcatcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactctta 380  Q
    ||||| |||||||||||| ||  ||||||||||||| | |||||  ||||| |||||   |||||||| ||||||||| ||| || | ||||||| ||||    
T  22357347 agacaacatcagattttctaattttcacgttttcgcgcgtaaaatccaaaccgttaactcgttttcgatgccgttttcgcctacacgctcctgacactta 22357248  T
Q  381 gccctatcataatctacagaaaa-ttcaagtttcaaccacccnnnnnnnntcgatttcca-aacctcacataatcccttatttgcaaaaacgtttagaca 478  Q
     | |||||| | ||||||||||| ||||||||||||||||||        |||||||||| |||||||||||||| ||||||||||||| ||||||||||    
T  22357247 actctatca-attctacagaaaaattcaagtttcaaccacccaaaaa---tcgatttccagaacctcacataatcacttatttgcaaaa-cgtttagaca 22357153  T
Q  479 ccgacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    |||| ||||||| |||| |||||||||| |||||||||||    
T  22357152 ccgatttttcaaacgaagatcccaatttccatcaacccaa 22357113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 282 - 416
Target Start/End: Original strand, 20711509 - 20711644
Alignment:
Q  282 agacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 381  Q
    ||||| || |||||||||||| | ||| ||||| | |||||||||||||| |||||||||||||||| | ||||||||||| ||||||| |||| |||||    
T  20711509 agacagcaccagattttcaacctccacattttcacgcataaaaatcaaaccgttaatctgttttcgatgtcgttttcacctacatgttcatgacacttag 20711608  T
Q  382 ccctatcataatctacag-aaaattcaagtttcaac 416  Q
    ||||||| |||| ||||| |||||||||||||||||    
T  20711609 ccctatcttaatgtacagaaaaattcaagtttcaac 20711644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 648 - 757
Target Start/End: Original strand, 39537962 - 39538071
Alignment:
Q  648 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgag 747  Q
    ||||| |||||||||| ||||||||||||||||||||||  | |||||| |||||||||| || ||||||||||||||||||||||||||| ||| ||||    
T  39537962 acaagccatttctttaatgattttgttttgtttcaaaatggttaagtccttagaatagttggttcgtttaatggaacattaagtataacttaattgtgag 39538061  T
Q  748 accccattaa 757  Q
    ||| ||||||    
T  39538062 acctcattaa 39538071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 283 - 510
Target Start/End: Complemental strand, 20765699 - 20765474
Alignment:
Q  283 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 382  Q
    |||| |||||||||||||   ||||||||||| | | |||||||||||| ||||| |  ||||||| ||||||||| ||| |  | ||||||| ||||||    
T  20765699 gacagcatcagattttcactcttcacgttttcacgcctaaaaatcaaaccgttaaccccttttcgatgccgttttcgcctacgcgctcctgacacttagc 20765600  T
Q  383 cctatcataatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgatttcc-aaacctcacataatcccttatttgcaaaaacgtttagacacc 480  Q
     |||||| ||||||||| ||||||| ||||||||||||||        | | ||||| ||||||||||||||| || |||||| ||||| ||||||||||    
T  20765599 tctatcacaatctacagaaaaattccagtttcaaccaccc---aaaaataggtttccaaaacctcacataatcactcatttgc-aaaacatttagacacc 20765504  T
Q  481 gacttttcaagcgaaaatcccaattttcat 510  Q
    |||| |||||||||||||| ||||||||||    
T  20765503 gactcttcaagcgaaaatctcaattttcat 20765474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 652 - 833
Target Start/End: Complemental strand, 17285935 - 17285754
Alignment:
Q  652 ggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgagaccc 751  Q
    ||||||| ||||||||||||||| ||||||||||||||||  |||  ||||||||||||| ||||||||||||||||||| | |||| ||  ||| ||||    
T  17285935 ggcatttatttattgattttgttatgtttcaaaataataatctccagagaatagttagtctgtttaatggaacattaagtgtgacttaatcgtgaaaccc 17285836  T
Q  752 cattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagact 833  Q
     | |||||  || || | |||||| ||||||| | ||||| | |||||||| ||| |||||||  ||||||||||| |||||    
T  17285835 tagtaaactaaatgacattattcttaaagtattcatagtcgatctttattgtgaattgggatagtattaaagcatatagact 17285754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 282 - 393
Target Start/End: Original strand, 21204359 - 21204470
Alignment:
Q  282 agacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 381  Q
    ||||| ||||||||||||||| |  |||||||||| |||||||||||||| ||||||| |||||||| ||||||||||||| |||| |||| || |||||    
T  21204359 agacagcatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcacctacatgctcctaacacttag 21204458  T
Q  382 ccctatcataat 393  Q
    | ||||||||||    
T  21204459 cactatcataat 21204470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 101 - 274
Target Start/End: Original strand, 20711262 - 20711435
Alignment:
Q  101 ccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaa 200  Q
    ||||||| |||| |||| ||||||| |||||||| | ||||  | ||||||||||||||||| |||||  || |||||||||| ||||||||   |||||    
T  20711262 ccctttacacaaggttaattctttcataaaaacacccctagatgattaggataaagtccctatacttagaaataagtttggaaacaattggatcaaagaa 20711361  T
Q  201 aaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgatttttccag 274  Q
    || ||  |||||||||||| |||   ||||  ||||| |||||||||| |||||||||| ||||||||||||||    
T  20711362 aattgcatttttaaggtttttagaaagacaacatcgtggcacgttggtttcccatcgtgacacgatttttccag 20711435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 342 - 518
Target Start/End: Original strand, 23539431 - 23539604
Alignment:
Q  342 ttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacaga-aaattcaagtttcaaccacccnnnnnnnntcgatttcca- 439  Q
    ||||||| ||||||||| ||| || | ||||||| |||||| ||||||||||||||||| |||||||||||||||||||||        | ||||||||     
T  23539431 ttttcgatgccgttttcgcctacacgctcctgacacttagctctatcataatctacagataaattcaagtttcaaccaccc---aaaaattgatttccag 23539527  T
Q  440 aacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    |||||||||||||| ||||||||| |||||| || |||||||||||||||| |  |||| ||||||||||| |||||||    
T  23539528 aacctcacataatcacttatttgc-aaaacg-ttggacaccgacttttcaaacataaattccaattttcattaacccaa 23539604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 310 - 418
Target Start/End: Complemental strand, 9731020 - 9730912
Alignment:
Q  310 ttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattcaag 409  Q
    ||||||| |||||||||||||| ||||||| |||||||||||||||||| ||| |||| |||| || ||| || ||||||||||||||| ||| |||| |    
T  9731020 ttttcgcgcataaaaatcaaaccgttaatccgttttcgacgccgttttcgcctacatgctcctaacacttggcactatcataatctacaaaaatttcatg 9730921  T
Q  410 tttcaacca 418  Q
    |||||||||    
T  9730920 tttcaacca 9730912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 761 - 853
Target Start/End: Original strand, 39538701 - 39538793
Alignment:
Q  761 taaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 853  Q
    |||||| |||||||| ||| ||||| |||| ||||||||||| |||||||||||||||||||||||  |||||||||||| ||||||||||||    
T  39538701 taaggacactattcttaaaatatccatagttaagctttattgtgaagtgggatatcattaaagcatgaagactattatgtgggtagactgatg 39538793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 289 - 403
Target Start/End: Original strand, 21650138 - 21650252
Alignment:
Q  289 atcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatc 388  Q
    |||||||||||||| | ||||||||||| |||||||||||||| ||||||| ||||| || | ||||||||||| | |||||  ||| ||||||||||||    
T  21650138 atcagattttcaacctccacgttttcgcgcataaaaatcaaaccgttaatccgtttttgatgtcgttttcacctacttgttcacgacacttagccctatc 21650237  T
Q  389 ataatctacagaaaa 403  Q
     |||| |||||||||    
T  21650238 ttaatgtacagaaaa 21650252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 556 - 612
Target Start/End: Complemental strand, 24695765 - 24695709
Alignment:
Q  556 tgtttgaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24695765 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 24695709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 282 - 518
Target Start/End: Original strand, 10817414 - 10817650
Alignment:
Q  282 agacatcatcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactctta 380  Q
    ||||| |||||||||||| ||  ||||||||||| | | |||||  ||||| ||||| |  ||||||| ||| ||||| ||| || | ||||||| ||||    
T  10817414 agacaacatcagattttctaatcttcacgttttcacgcgtaaaatccaaaccgttaacccattttcgatgcccttttcgcctacacgctcctgacactta 10817513  T
Q  381 gccctatcataatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgatttcca-aacctcacataatcccttatttgcaaaaacgtttagaca 478  Q
    || ||||||||||||| || ||||||||||||||||||||||        |||||||||| ||||||| |||||  ||||||||| |||||||||||||     
T  10817514 gctctatcataatctatagaaaaattcaagtttcaaccaccc---aaaaatcgatttccagaacctcatataattacttatttgc-aaaacgtttagacg 10817609  T
Q  479 ccgacttttcaagcg-aaaatcccaattttcatcaacccaa 518  Q
    |||| ||||||| || ||||||| ||||| ||| |||||||    
T  10817610 ccgatttttcaaacgaaaaatccaaatttccataaacccaa 10817650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 553 - 612
Target Start/End: Complemental strand, 19714801 - 19714742
Alignment:
Q  553 tactgtttgaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  19714801 tactgttggagtaagccctaatagccaatctatattgattgggtttggctttgtatcatg 19714742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 714 - 855
Target Start/End: Complemental strand, 18807175 - 18807034
Alignment:
Q  714 tttaatggaacattaagtataactttattatgagaccccattaaacataa-ggaaactattctcaaagtatccgtagtcaagctttattgagaagtggga 812  Q
    |||||||||||||||||| | |||| ||  |||||| |||||||| |||| ||| | |||||| ||||||||  ||||||||| |||||| |||||  ||    
T  18807175 tttaatggaacattaagtgtgacttaatcgtgagacaccattaaa-ataatggacattattcttaaagtatctatagtcaagcgttattgtgaagtaaga 18807077  T
Q  813 tatcattaaagcatagagactattatgtaggtagactgatgat 855  Q
    || || |||||||||||||||||||||  ||||||||||||||    
T  18807076 taacaataaagcatagagactattatgcgggtagactgatgat 18807034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 652 - 833
Target Start/End: Complemental strand, 17299088 - 17298907
Alignment:
Q  652 ggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgagaccc 751  Q
    ||||||| ||||||||||||||| |||||  |||||||||  |||  ||||||||||||||| |||||||||||||||||   |||| ||  ||| ||||    
T  17299088 ggcatttatttattgattttgttatgtttataaataataatatccagagaatagttagtccgattaatggaacattaagtgcgacttaatcgtgaaaccc 17298989  T
Q  752 cattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagact 833  Q
     | |||||  || || | |||||| ||||||| | ||||| | ||||||||  ||||||||||  ||||||||||| |||||    
T  17298988 tagtaaactaaatgacattattcttaaagtattcatagtcgatctttattgttaagtgggatagtattaaagcatatagact 17298907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 654 - 757
Target Start/End: Original strand, 31886537 - 31886640
Alignment:
Q  654 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgagacccca 753  Q
    |||||||||| |||||||||||||||||||| ||||||||||| ||||||| ||||| | |||||| |||||| |||||  |||| ||  |||||| |||    
T  31886537 catttctttagtgattttgttttgtttcaaattaataaagtccttagaataattagttcatttaattgaacatcaagtacgacttaatcgtgagactcca 31886636  T
Q  754 ttaa 757  Q
    ||||    
T  31886637 ttaa 31886640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 555 - 612
Target Start/End: Complemental strand, 27347779 - 27347722
Alignment:
Q  555 ctgtttgaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    ||||| || |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  27347779 ctgttggagtaagccctaatagccaatctatattgattgcgtttggctttgtatcatg 27347722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 564 - 612
Target Start/End: Complemental strand, 19707510 - 19707462
Alignment:
Q  564 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  19707510 taagccctaatagccaatctatattgattgagtttggctttgtatcatg 19707462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 289 - 416
Target Start/End: Complemental strand, 22007325 - 22007197
Alignment:
Q  289 atcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatc 388  Q
    ||||||||||| || ||||||||||||| |||||||| ||||| ||||| | |||||||| ||||||||| ||| || | || |||  | |||| |||||    
T  22007325 atcagattttcgaccttcacgttttcgcgcataaaaaccaaaccgttaacccgttttcgatgccgttttcgcctacacgctcatgagacatagcactatc 22007226  T
Q  389 ataatctacag-aaaattcaagtttcaac 416  Q
    ||||||||| | |||| ||||||||||||    
T  22007225 ataatctaccgaaaaactcaagtttcaac 22007197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 120 - 278
Target Start/End: Original strand, 21649903 - 21650061
Alignment:
Q  120 tctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggttt 219  Q
    |||||| |||||||| | ||||  | ||||||||||||||| | |||||  || ||||||||||  |||||||   ||||||| ||  || |||||||||    
T  21649903 tctttcataaaaacacccctagatgattaggataaagtcccaatacttagaaataagtttggaaaaaattggatcaaagaaaattgcattgttaaggttt 21650002  T
Q  220 ctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgatttttccagcatc 278  Q
     ||    ||||| ||||| |||||||||| |||||||||||||| ||||||||||||||    
T  21650003 ttaaaaagacagcatcgtggcacgttggtttcccatcgtggcacaatttttccagcatc 21650061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 101 - 224
Target Start/End: Complemental strand, 9731379 - 9731256
Alignment:
Q  101 ccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaa 200  Q
    ||||| |||| ||| |||||||| | |||||||||| ||||  | ||||||||||||||||| || ||  || |||||||||| ||||||||   |||||    
T  9731379 cccttaatacgaagctatttcttccataaaaacatccctagatgattaggataaagtccctatacatagaaataagtttggaaacaattggatcaaagaa 9731280  T
Q  201 aaatgtctttttaaggtttctagt 224  Q
    || ||  |||||||||||||||||    
T  9731279 aattgcatttttaaggtttctagt 9731256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 564 - 612
Target Start/End: Complemental strand, 18570156 - 18570108
Alignment:
Q  564 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    ||||| |||||||| |||||||||| |||||||||||||||||||||||    
T  18570156 taagctctaatagctaatctatattaattgggtttggctttgtatcatg 18570108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 437 - 517
Target Start/End: Original strand, 22470588 - 22470667
Alignment:
Q  437 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaaccca 517  Q
    ||||||||||||||||| ||||||||| |||||||||| ||  ||||||||||| ||||||  ||||||| |||| |||||    
T  22470588 ccaaacctcacataatctcttatttgc-aaaacgtttatacttcgacttttcaaacgaaaactccaatttccatcgaccca 22470667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 674 - 731
Target Start/End: Complemental strand, 33477479 - 33477422
Alignment:
Q  674 tttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagt 731  Q
    ||||||||||||||||||||||| || ||||||||| | | |||||||| ||||||||    
T  33477479 tttgtttcaaaataataaagtccttacaatagttaggctgattaatggatcattaagt 33477422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 350 - 418
Target Start/End: Complemental strand, 20197716 - 20197648
Alignment:
Q  350 gccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattcaagtttcaacca 418  Q
    ||||||||| ||| || | ||||||| |||| | ||||||||||||||||||| ||||||| |||||||    
T  20197716 gccgttttcgcctacacgctcctgacacttaactctatcataatctacagaaatttcaagtctcaacca 20197648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 564 - 611
Target Start/End: Original strand, 39537878 - 39537925
Alignment:
Q  564 taagccctaatagccaatctatattgattgggtttggctttgtatcat 611  Q
    |||||||||||||||||||||| |||| || |||| ||||||||||||    
T  39537878 taagccctaatagccaatctatgttgactgagtttagctttgtatcat 39537925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 180
Target Start/End: Original strand, 20727222 - 20727308
Alignment:
Q  94 cattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttg 180  Q
    |||||||||| |||||||| |||| || |||| |||||||| | || |  |||||| | |||||||||||||||| ||| |||||||    
T  20727222 cattagacccattatacaacgttaattatttcataaaaacaccccttgatggttagcaaaaagtccctacacttaagaataagtttg 20727308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0377 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: scaffold0377
Description:

Target: scaffold0377; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 44 - 511
Target Start/End: Complemental strand, 16785 - 16319
Alignment:
Q  44 tataatcctcaacaactttctttcctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtc 143  Q
    ||||||| | |||||||||| ||||||||||| ||||||||||| |||||||||||||||||| ||||| |||||||| |||||||||||||||||||      
T  16785 tataatcattaacaactttcattcctaccccaaggaccaactcatgaactcattagaccctttttacaaggttatttccttcctaaaaacatctctagat 16686  T
Q  144 ggttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacg 243  Q
    ||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||| ||  |||||||||||||| || |||||  ||||| |||||    
T  16685 ggttaggataaagtctctacacttaggaagaagtttggaagcatttggagtgaagaaaattgcatttttaaggtttctggtatgacatcatcgtggcacg 16586  T
Q  244 ttggtctcccatcgtggcacgatttttccagcatctct-agacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgt 342  Q
    ||||||| ||||||||||||||||||||||| || | | ||||  | ||||||||||||| ||||||||||||| |||||||| ||||| ||||||| ||    
T  16585 ttggtct-ccatcgtggcacgatttttccag-atttgtcagacgacttcagattttcaaccttcacgttttcgcgcataaaaaccaaaccgttaatccgt 16488  T
Q  343 tttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacag-aaaattcaagtttcaaccacccnnnnnnnntcga-tttccaa 440  Q
    ||||||  |||||||| ||| || | ||||||| |||||| |||||||||||||||| |||||||||||||||||||| |        |||| |||||||    
T  16487 tttcgataccgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaattcaagtttcaaccacac-aaaaaaatcgattttccaa 16389  T
Q  441 acctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatc 511  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||    
T  16388 acctcacataatctcttatttgc-aaaacgtttagacaccgacttttcaaacgaaaatcccaatttccatc 16319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 216; Significance: 1e-118; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 68 - 510
Target Start/End: Original strand, 18239 - 18678
Alignment:
Q  68 ctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacactt 167  Q
    ||||||||  |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||    
T  18239 ctaccccaaagaccaactca-gaactcattagaccctttatacaaagttatttctttcataaaaacatctctagatggttaggataaagtccctacactt 18337  T
Q  168 atgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgatt 267  Q
    | ||||||||||||||||||||||||||||||||| ||| ||||||||| ||||   ||||||||||||| |||||||||||||||||||||||||||||    
T  18338 aggaagaagtttggaagcaattggagtgaagaaaattgtatttttaaggattctttggtgacagaatcgtggcacgttggtctcccatcgtggcacgatt 18437  T
Q  268 tttccagcatctctagacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatg 367  Q
    |||||||  ||   ||||  | || |||||||||| ||||||||||||| |||||||||||||| ||||| |  ||||||| ||||||||| |||  |      
T  18438 tttccagattcgacagacgacttctgattttcaaccttcacgttttcgcacataaaaatcaaaccgttaacccattttcgatgccgttttcgcctaaaca 18537  T
Q  368 ttcctgactcttagccctatcataatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgatttcc-aaacctcacataatcccttatttgcaa 465  Q
     ||||||| ||| || |||||||||||||||| ||||||||||||||||||||||        ||||| ||| |||||||||| |||| ||||||||| |    
T  18538 ctcctgacacttggctctatcataatctacagaaaaattcaagtttcaaccaccc---aaaaatcgatctccaaaacctcacacaatcacttatttgc-a 18633  T
Q  466 aaacgtttagacaccgacttttcaagcgaaaatcccaattttcat 510  Q
    ||||||| |||||||||||||||||||||||||||||||||||||    
T  18634 aaacgttcagacaccgacttttcaagcgaaaatcccaattttcat 18678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 289 - 367
Target Start/End: Original strand, 14392 - 14470
Alignment:
Q  289 atcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatg 367  Q
    |||| ||||||||| |  |||||||||| |||||||||||||| ||||||| |||||| | ||||||||||||| ||||    
T  14392 atcaaattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatccgttttctatgccgttttcacctacatg 14470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 214; Significance: 1e-117; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 174 - 556
Target Start/End: Original strand, 19358381 - 19358757
Alignment:
Q  174 aagtttggaagcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgatttt-tcc 272  Q
    ||||||||||||||||||||||||||||| |   ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||    
T  19358381 aagtttggaagcaattggagtgaagaaaattacatttttaaggtttctagtgtgatagaatcgtggcacgttggtctcccatcgtggcacgattttttcc 19358480  T
Q  273 agcatctctagacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcct 372  Q
    |||||||||| ||| |||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||| |  |||||||||| |||||||||    
T  19358481 agcatctctacacagcatcagattttcaaccatcacgttttcgctcataaaaatcaaaccgttaatctgttttcgatgttgttttcacctacatgttcct 19358580  T
Q  373 gactcttagccctatcataatctacag-aaaattcaagtttcaaccaccc-nnnnnnnntcgatttccaaacctcacataatcccttatttgcaaaaacg 470  Q
    ||| |||| | |||||||||| ||||| ||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||    
T  19358581 gacacttaactctatcataatatacagaaaaattcaagtttcaaccacccaaaaaaaaatcgatttccaaacctcacataatcccttatttgcaaaaacg 19358680  T
Q  471 tttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaatgtaacccaaccccaaaactggttctaatcattgtact 556  Q
    |||||||||| || ||||||||||||||| |||||||||| ||||||         ||||||||||||||||||||||||||||||    
T  19358681 tttagacaccaacgtttcaagcgaaaatctcaattttcattaaccca---------aaccccaaaactggttctaatcattgtact 19358757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 648 - 855
Target Start/End: Complemental strand, 21330455 - 21330248
Alignment:
Q  648 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgag 747  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  21330455 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 21330356  T
Q  748 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 847  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  21330355 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtgga 21330256  T
Q  848 ctgatgat 855  Q
    ||||||||    
T  21330255 ctgatgat 21330248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 648 - 855
Target Start/End: Original strand, 18796506 - 18796713
Alignment:
Q  648 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgag 747  Q
    |||||| |||| ||| || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  18796506 acaaggaatttatttgtttattttgttttgtttcaaaataacaaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 18796605  T
Q  748 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 847  Q
    ||| | || |||||||||| | |||||| ||| |||| ||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||| ||||||    
T  18796606 acctcttttaacataaggatattattcttaaattatctgtagtcaagctttattgtgaagtggtatatcattaaagcattgagactattatgtgggtaga 18796705  T
Q  848 ctgatgat 855  Q
    ||||||||    
T  18796706 ctgatgat 18796713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 54 - 202
Target Start/End: Complemental strand, 6477953 - 6477805
Alignment:
Q  54 aacaactttctttcctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggata 153  Q
    |||||||| | ||||||||||| ||||||||||| ||||||||| ||| |||||||||| ||||||||||||||||||||||||||||  ||||||||||    
T  6477953 aacaacttccattcctaccccaaggaccaactcatgaactcattggacgctttatacaacgttatttctttcctaaaaacatctctagatggttaggata 6477854  T
Q  154 aagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaa 202  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  6477853 aagtccctacacttaggaagaagtttggaagcaattggagtgaagaaaa 6477805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 83 - 274
Target Start/End: Complemental strand, 27367259 - 27367069
Alignment:
Q  83 actcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttgga 182  Q
    ||||| ||||||||||||||||| |||||| ||||| |||||||||||||||||||||   | |||||||||||||||||||||||  ||||||||||||    
T  27367259 actcatgaactcattagaccctt-atacaacgttatatctttcctaaaaacatctctatatgtttaggataaagtccctacacttagaaagaagtttgga 27367161  T
Q  183 agcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgatttttccag 274  Q
    |||| ||||||||||||||| ||  |||||| ||||| | |  |||||| ||||| |||||||||| |||||||||||||||||||||||||    
T  27367160 agcatttggagtgaagaaaattgcatttttagggtttattggatgacagcatcgtggcacgttggtatcccatcgtggcacgatttttccag 27367069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 650 - 855
Target Start/End: Original strand, 18619807 - 18620011
Alignment:
Q  650 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgagac 749  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||| |||||||| | |||| |||||||||     
T  18619807 aaggaatttctttgttgattttgttttgtttcaaaataataaagtccctataataattagtctgtttaatggagcattaagtgtgacttaattatgaga- 18619905  T
Q  750 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 849  Q
    ||||||||||| ||||| | |||||| |||||||| || ||||| |||||||| |||  ||||||  ||||||||||| |||||||||||| ||||| |     
T  18619906 cccattaaacaaaaggatattattcttaaagtatctgtggtcaaactttattgtgaaaagggataatattaaagcatatagactattatgtgggtaggcc 18620005  T
Q  850 gatgat 855  Q
    ||||||    
T  18620006 gatgat 18620011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 108 - 274
Target Start/End: Original strand, 19659239 - 19659405
Alignment:
Q  108 tacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatgtc 207  Q
    ||||||| |||||||||| |||||||||| ||||  | ||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||| ||      
T  19659239 tacaaagctatttctttcataaaaacatccctagatgattaggataaagtccctacacttaggaagaagtttggaaacaattggagcgaagaaaattgca 19659338  T
Q  208 tttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgatttttccag 274  Q
    |||||||||||| | || | | |  ||||| ||||||||||||||||||||||||||||||||||||    
T  19659339 tttttaaggtttttggtctaataacatcgtggcacgttggtctcccatcgtggcacgatttttccag 19659405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 282 - 415
Target Start/End: Original strand, 19659479 - 19659613
Alignment:
Q  282 agacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 381  Q
    ||||| ||||||||||||||  ||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||| |||||    
T  19659479 agacaacatcagattttcaaacttcacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgttcctgacacttag 19659578  T
Q  382 ccctatcataatctacag-aaaattcaagtttcaa 415  Q
    |||||||||||| ||||| ||||||||| ||||||    
T  19659579 ccctatcataatgtacagaaaaattcaaatttcaa 19659613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 67 - 202
Target Start/End: Complemental strand, 6744015 - 6743882
Alignment:
Q  67 cctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacact 166  Q
    ||||||||| |||||| |||| ||||||||||||||||| |||||| ||||| |||||||||||||||||||||  || |||||||||||||||||||||    
T  6744015 cctaccccaaggacca-ctcatgaactcattagaccctt-atacaacgttatatctttcctaaaaacatctctatacgtttaggataaagtccctacact 6743918  T
Q  167 tatgaagaagtttggaagcaattggagtgaagaaaa 202  Q
    || ||||||||||||||||| |||||||||||||||    
T  6743917 taggaagaagtttggaagcatttggagtgaagaaaa 6743882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 91 - 274
Target Start/End: Complemental strand, 23822634 - 23822451
Alignment:
Q  91 actcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattg 190  Q
    ||||| ||||| ||| | ||||||||||||||||| ||||| || | ||||  |||||| |||||||||||||||||| ||| |||||||||| | ||||    
T  23822634 actcactagacgcttcacacaaagttatttctttcataaaagcacccctagatggttagaataaagtccctacacttaggaataagtttggaaacgattg 23822535  T
Q  191 gagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgatttttccag 274  Q
    || ||||||||| ||  ||||||||||||| |||  ||||| ||||| |||||||||||||||||||||||||||| |||||||    
T  23822534 gattgaagaaaattgcatttttaaggtttcaagtaagacagcatcgtggcacgttggtctcccatcgtggcacgatatttccag 23822451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 91 - 274
Target Start/End: Complemental strand, 23831713 - 23831530
Alignment:
Q  91 actcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattg 190  Q
    ||||| ||||| ||| | ||||||||||||||||| ||||| || | ||||  |||||| |||||||||||||||||| ||| |||||||||| | ||||    
T  23831713 actcactagacgcttcacacaaagttatttctttcataaaagcacccctagatggttagaataaagtccctacacttaggaataagtttggaaacgattg 23831614  T
Q  191 gagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgatttttccag 274  Q
    || ||||||||| ||  ||||||||||||| |||  ||||| ||||| |||||||||||||||||||||||||||| |||||||    
T  23831613 gattgaagaaaattgcatttttaaggtttcaagtaagacagcatcgtggcacgttggtctcccatcgtggcacgatatttccag 23831530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 67 - 202
Target Start/End: Original strand, 43693887 - 43694020
Alignment:
Q  67 cctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacact 166  Q
    ||||||||| |||||| |||| ||||||||||||||||| |||||| ||||| |||||||||||||||||||||  || |||||||||||||||||||||    
T  43693887 cctaccccaaggacca-ctcatgaactcattagaccctt-atacaacgttatatctttcctaaaaacatctctatacgtttaggataaagtccctacact 43693984  T
Q  167 tatgaagaagtttggaagcaattggagtgaagaaaa 202  Q
    || ||||||||||||||||| |||||||||||||||    
T  43693985 taggaagaagtttggaagcatttggagtgaagaaaa 43694020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 288 - 518
Target Start/End: Complemental strand, 6477674 - 6477446
Alignment:
Q  288 catcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagcccta 386  Q
    |||||||||||| ||| ||||||||||||| | |||||  ||||| ||||| |  |||| || ||||||||| ||| || | ||||||| ||||||| ||    
T  6477674 catcagattttctaactttcacgttttcgcgcgtaaaatccaaaccgttaacccatttttgatgccgttttcgcctacacgctcctgacacttagcctta 6477575  T
Q  387 tcataatctacagaaaa-ttcaagtttcaaccacccnnnnnnnntcgatttccaaa-cctcacataatcccttatttgcaaaaacgtttagacaccgact 484  Q
    |||| |||||||||||| ||||||||||||||||||        |||||||||||| |||||||||||| ||||||||||||  ||||||||||||||||    
T  6477574 tcattatctacagaaaaattcaagtttcaaccacccaaaaa---tcgatttccaaaacctcacataatcgcttatttgcaaa--cgtttagacaccgact 6477480  T
Q  485 tttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    ||||||| |||||||||||||| ||| |||||||    
T  6477479 tttcaagggaaaatcccaatttccattaacccaa 6477446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 101 - 273
Target Start/End: Complemental strand, 21275118 - 21274946
Alignment:
Q  101 ccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaa 200  Q
    ||||| |||||||| |||||||||| |||||||||| ||||  | ||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||    
T  21275118 cccttaatacaaagctatttctttcataaaaacatccctagatgattaggataaagtccctacacttaggaagaagtttggaaccaattggagcgaagaa 21275019  T
Q  201 aaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgatttttcca 273  Q
    || ||  ||||| |||||| | ||   |||| ||||| |||||||||| |||||||||||||| |||||||||    
T  21275018 aattgcatttttgaggtttttggtcaaacagcatcgtggcacgttggtttcccatcgtggcacaatttttcca 21274946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 67 - 202
Target Start/End: Original strand, 201127 - 201260
Alignment:
Q  67 cctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacact 166  Q
    ||||||||| |||||| |||| ||||||||||||||||| |||||| ||||| |||||||||||||||||||||  || |||||||||| ||||||||||    
T  201127 cctaccccaaggacca-ctcatgaactcattagaccctt-atacaacgttatatctttcctaaaaacatctctatacgtttaggataaattccctacact 201224  T
Q  167 tatgaagaagtttggaagcaattggagtgaagaaaa 202  Q
    || ||||||||||||||||| |||||||||||||||    
T  201225 taggaagaagtttggaagcatttggagtgaagaaaa 201260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 654 - 793
Target Start/End: Complemental strand, 19692737 - 19692598
Alignment:
Q  654 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgagacccca 753  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||||||||  | |||| || |||||| | ||    
T  19692737 catttctttattgattttgttttgtttcaaaataatgaagtccctagaataattagtctgtttaatggaacattaagcctgacttaatcatgagatctca 19692638  T
Q  754 ttaaacataaggaaactattctcaaagtatccgtagtcaa 793  Q
    ||||||  ||||||| |||||| ||||||||| |||||||    
T  19692637 ttaaactaaaggaaattattcttaaagtatccttagtcaa 19692598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 282 - 518
Target Start/End: Original strand, 22703579 - 22703815
Alignment:
Q  282 agacatcatcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactctta 380  Q
    ||||| |||||||||||| ||  ||||||||||||| | |||||  ||||  ||||| |  ||||||| ||||||||| ||| || | ||||||| ||||    
T  22703579 agacaacatcagattttctaatcttcacgttttcgcgcgtaaaatccaaatcgttaacccattttcgatgccgttttcgcctacacgctcctgacactta 22703678  T
Q  381 gccctatcataatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgatttcca-aacctcacataatcccttatttgcaaaaacgtttagaca 478  Q
    || |||||||||||||||| ||||||||||||||||||||||        |||||||||| |||||||||||||| ||||||||| ||||||||||||||    
T  22703679 gctctatcataatctacagaaaaattcaagtttcaaccaccc---aaaaatcgatttccagaacctcacataatcacttatttgc-aaaacgtttagaca 22703774  T
Q  479 ccgacttttcaagcg-aaaatcccaattttcatcaacccaa 518  Q
    || | ||||||| || ||||||||||||| |||||||||||    
T  22703775 ccaatttttcaaacgaaaaatcccaatttccatcaacccaa 22703815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 713 - 840
Target Start/End: Original strand, 20977957 - 20978084
Alignment:
Q  713 gtttaatggaacattaagtataactttattatgagaccccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtggga 812  Q
    |||||||||||||||||| |||| || || |||||| ||||||||| ||||||||| |||||| |||  |||||||||||||||||| || |||||| ||    
T  20977957 gtttaatggaacattaagaataatttaatcatgagatcccattaaaaataaggaaattattcttaaaacatccgtagtcaagctttaatgtgaagtgaga 20978056  T
Q  813 tatcattaaagcatagagactattatgt 840  Q
    ||||| ||||||||||||||||||||||    
T  20978057 tatcactaaagcatagagactattatgt 20978084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 304 - 501
Target Start/End: Complemental strand, 24087993 - 24087798
Alignment:
Q  304 ttcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaa- 402  Q
    ||||||||||||| | |||||  ||||  || || | |||||||| ||||||||| ||| || | ||||||| |||||| |||||||||||||||||||     
T  24087993 ttcacgttttcgcgcgtaaaatccaaatcgtcaacccgttttcgatgccgttttcgcctacacgctcctgacacttagctctatcataatctacagaaac 24087894  T
Q  403 attcaagtttcaaccacccnnnnnnnntcgatttccaaa-cctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatccc 501  Q
    |||||||||||||| ||||        || ||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  24087893 attcaagtttcaactacccaaaaa---tctatttccaaaacctcacataatcacttatttgcaaaa-cgtttagacaccgacttttcaagcgaaaatccc 24087798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 437 - 518
Target Start/End: Complemental strand, 43707335 - 43707254
Alignment:
Q  437 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||    
T  43707335 ccaaacctcacataatcacttatttgcaaaaacgtttagacaccgacctttcaagcgaaaatcccaattttcatgaacccaa 43707254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 81 - 202
Target Start/End: Complemental strand, 45618301 - 45618180
Alignment:
Q  81 caactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttg 180  Q
    |||| |||||||||||||||||||||||||||||||||||||||| ||||| || | ||||  |||||||||||||||| | |||||| ||| |||||||    
T  45618301 caacacaagaactcattagaccctttatacaaagttatttctttcataaaaccacccctagatggttaggataaagtccatgcacttaggaataagtttg 45618202  T
Q  181 gaagcaattggagtgaagaaaa 202  Q
    ||| |||||||| |||||||||    
T  45618201 gaaacaattggattgaagaaaa 45618180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 281 - 411
Target Start/End: Complemental strand, 23822378 - 23822247
Alignment:
Q  281 tagacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactctta 380  Q
    |||||| ||||||||||  ||| ||||||||||||  ||||| |||||||| ||||||| |||||||| ||||||||||||| ||||||| |||| ||||    
T  23822378 tagacagcatcagatttcgaaccttcacgttttcgagcataacaatcaaaccgttaatccgttttcgatgccgttttcacctacatgttcatgacactta 23822279  T
Q  381 gccctatcataatctacag-aaaattcaagtt 411  Q
    |||||||| |||| ||||| ||||||||||||    
T  23822278 gccctatcttaatgtacagaaaaattcaagtt 23822247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 281 - 411
Target Start/End: Complemental strand, 23831457 - 23831326
Alignment:
Q  281 tagacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactctta 380  Q
    |||||| ||||||||||  ||| ||||||||||||  ||||| |||||||| ||||||| |||||||| ||||||||||||| ||||||| |||| ||||    
T  23831457 tagacagcatcagatttcgaaccttcacgttttcgagcataacaatcaaaccgttaatccgttttcgatgccgttttcacctacatgttcatgacactta 23831358  T
Q  381 gccctatcataatctacag-aaaattcaagtt 411  Q
    |||||||| |||| ||||| ||||||||||||    
T  23831357 gccctatcttaatgtacagaaaaattcaagtt 23831326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 291 - 421
Target Start/End: Complemental strand, 36891490 - 36891359
Alignment:
Q  291 cagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcat 390  Q
    |||||||||||| |  |||||||||| ||||||| |||||| |||||||  ||||||| ||||||||||||| | ||||| |||| |||||||||||| |    
T  36891490 cagattttcaacctctacgttttcgcgcataaaactcaaaccgttaatccattttcgatgccgttttcacctacgtgttcatgacacttagccctatctt 36891391  T
Q  391 aatctacag-aaaattcaagtttcaaccaccc 421  Q
    ||| ||||| ||||||||||||||||| ||||    
T  36891390 aatgtacagaaaaattcaagtttcaacaaccc 36891359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 101 - 223
Target Start/End: Complemental strand, 42178955 - 42178834
Alignment:
Q  101 ccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaa 200  Q
    ||||| |||||||| |||||||||| |||||||||| ||||  | ||||||||||||||||||||||| ||||||||||||||| |||||||   |||||    
T  42178955 cccttaatacaaagctatttctttcataaaaacatccctagatgattaggataaagtccctacacttaggaagaagtttggaagtaattggatcaaagaa 42178856  T
Q  201 aaatgtctttttaaggtttctag 223  Q
    || || | |||||||||||||||    
T  42178855 aattg-cattttaaggtttctag 42178834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 146 - 274
Target Start/End: Complemental strand, 36891700 - 36891572
Alignment:
Q  146 ttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgtt 245  Q
    ||||||||||||||||| ||||| ||| |||||||||| ||||||||   ||||||| ||  |||||||||||| |||   ||||  ||||| |||||||    
T  36891700 ttaggataaagtccctatacttacgaataagtttggaaacaattggatcaaagaaaattgcatttttaaggtttttagaaagacaacatcgtggcacgtt 36891601  T
Q  246 ggtctcccatcgtggcacgatttttccag 274  Q
    ||| |||||||||||||||||||||||||    
T  36891600 ggtttcccatcgtggcacgatttttccag 36891572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 297 - 418
Target Start/End: Complemental strand, 42178610 - 42178489
Alignment:
Q  297 ttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatcta 396  Q
    |||||| | ||||||||||| |||||||||||||| ||||||| |||||||| ||||||||| ||| |||| |||| || ||| || |||||||||||||    
T  42178610 ttcaacttccacgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcgcctacatgctcctaacacttggcactatcataatcta 42178511  T
Q  397 cagaaaattcaagtttcaacca 418  Q
    ||  || |||| ||||||||||    
T  42178510 caagaatttcatgtttcaacca 42178489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 556 - 612
Target Start/End: Complemental strand, 21330549 - 21330493
Alignment:
Q  556 tgtttgaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21330549 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 21330493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 81 - 205
Target Start/End: Complemental strand, 24088262 - 24088138
Alignment:
Q  81 caactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttg 180  Q
    |||| |||| ||||||||||||||||||||||| ||||||||||| |||||||| | ||||  | ||||||||||||||||| |||||  || ||||||     
T  24088262 caacgcaagtactcattagaccctttatacaaaattatttctttcataaaaacacccctagatgattaggataaagtccctagacttagaaataagttta 24088163  T
Q  181 gaagcaattggagtgaagaaaaatg 205  Q
    ||| ||||| |  ||||||||||||    
T  24088162 gaaacaatttggttgaagaaaaatg 24088138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 307 - 418
Target Start/End: Complemental strand, 12642281 - 12642170
Alignment:
Q  307 acgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattc 406  Q
    |||||||||| |||||||||||||| ||||||| |||||||| ||||||||| ||| |||| |||| || ||| || |||||||||| |||| ||| |||    
T  12642281 acgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcgcctacatgctcctaacacttggcactatcataatttacaaaaatttc 12642182  T
Q  407 aagtttcaacca 418  Q
    | ||||||||||    
T  12642181 atgtttcaacca 12642170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 101 - 223
Target Start/End: Complemental strand, 3799598 - 3799476
Alignment:
Q  101 ccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaa 200  Q
    ||||| |||| ||| |||||||| | |||||||||| ||||  | ||||||||||||||||||||||| ||||||||||||||| |||||||    ||||    
T  3799598 cccttaatacgaagctatttcttccataaaaacatccctagatgattaggataaagtccctacacttaggaagaagtttggaagtaattggatcagagaa 3799499  T
Q  201 aaatgtctttttaaggtttctag 223  Q
    || ||  ||||||||||||||||    
T  3799498 aattgcatttttaaggtttctag 3799476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 682 - 855
Target Start/End: Original strand, 36270199 - 36270373
Alignment:
Q  682 aaaataataaagtccctagaatagttagtccgtttaa-tggaacattaagtataactttattatgagaccccattaaacataaggaaactattctcaaag 780  Q
    |||||||||||||||||||||||||||||    |||| || ||  |||||| | |||| ||  ||||||  ||||||||| || || |||||||| |||     
T  36270199 aaaataataaagtccctagaatagttagtttacttaaatgaaatgttaagtgtgacttaatcgtgagacatcattaaacacaatgacactattcttaaaa 36270298  T
Q  781 tatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 855  Q
     ||||||| |||||||||| || |||| |||||| |||||||| ||| |||||||| ||| ||||||||||||||    
T  36270299 catccgtaatcaagctttagtgtgaagagggataacattaaagtataaagactattgtgtgggtagactgatgat 36270373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 304 - 501
Target Start/End: Complemental strand, 45618032 - 45617836
Alignment:
Q  304 ttcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaa 403  Q
    ||||||||||||| | |||||  ||||| |||||||||||||||||||||||||| ||| || | |||||   |||||   || |||||||||  |||||    
T  45618032 ttcacgttttcgcgcgtaaaatccaaactgttaatctgttttcgacgccgttttcgcctacacgctcctggaacttagatataccataatctattgaaaa 45617933  T
Q  404 -ttcaagtttcaaccacccnnnnnnnntcgatttcca-aacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatccc 501  Q
     ||||||||||| ||||||        |||||||||| |||||||||||||| |||||||||||||| | ||| |||| |||||||||  ||||||||||    
T  45617932 attcaagtttcacccaccctaaaa---tcgatttccagaacctcacataatcgcttatttgcaaaaatgcttatacacggacttttcacacgaaaatccc 45617836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 19358289 - 19358382
Alignment:
Q  19 ttaattcaggctctctgaaacacaatataatcctcaacaactttctttcctaccccagggaccaactcaagaactcattagaccctttatacaa 112  Q
    ||||||||| ||| |||||||||||||||||  | |||||||||| ||| | |||||  |||||||||| ||||||||||||||||||||||||    
T  19358289 ttaattcagactcgctgaaacacaatataattatgaacaactttcattcatgccccaaagaccaactcacgaactcattagaccctttatacaa 19358382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 282 - 403
Target Start/End: Complemental strand, 21274871 - 21274750
Alignment:
Q  282 agacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 381  Q
    ||||| ||||||||||||||| |  |||||||||| |||||||||||||| |||||||  ||||||| ||||||||| ||| |||| |||| || |||||    
T  21274871 agacaacatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatccattttcgatgccgttttcgcctacatgctcctaacacttag 21274772  T
Q  382 ccctatcataatctacagaaaa 403  Q
    | |||||| |||  ||||||||    
T  21274771 cactatcacaatgcacagaaaa 21274750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 310 - 418
Target Start/End: Complemental strand, 12636504 - 12636396
Alignment:
Q  310 ttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattcaag 409  Q
    ||||||| |||||||||||||| ||||||| |||||||| ||||||| | ||| |||| |||| || ||| || ||||||||||||||| ||| |||| |    
T  12636504 ttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgtttccgcctacatgctcctaacacttggcactatcataatctacaaaaatttcatg 12636405  T
Q  410 tttcaacca 418  Q
    |||||||||    
T  12636404 tttcaacca 12636396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 307 - 418
Target Start/End: Complemental strand, 3799242 - 3799131
Alignment:
Q  307 acgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattc 406  Q
    |||||||||| |||||||||||||| ||||||| |||||||| ||||||||| ||| |||| |||| || ||| || |||||||| | |||| ||| |||    
T  3799242 acgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcgcctacatgctcctaacacttggcactatcatattttacaaaaatttc 3799143  T
Q  407 aagtttcaacca 418  Q
    | ||||||||||    
T  3799142 atgtttcaacca 3799131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 291 - 421
Target Start/End: Complemental strand, 9653699 - 9653568
Alignment:
Q  291 cagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcat 390  Q
    ||||||||| |  ||||||||||||| | |||||||||||| ||||||| |||||||| | ||||||||||| | ||||| |||| |||||  ||||| |    
T  9653699 cagattttccaatttcacgttttcgcgcgtaaaaatcaaaccgttaatccgttttcgatgtcgttttcacctacgtgttcatgacacttagttctatctt 9653600  T
Q  391 aatctacag-aaaattcaagtttcaaccaccc 421  Q
    ||| || || ||||||||||||||||| ||||    
T  9653599 aatgtatagaaaaattcaagtttcaacaaccc 9653568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 311 - 414
Target Start/End: Original strand, 16935056 - 16935159
Alignment:
Q  311 tttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattcaagt 410  Q
    |||||| ||||||| |||||| ||||||| | ||| |||||||||||| ||| || | ||||||| |||||| ||||||||||||||||||| |||| ||    
T  16935056 tttcgcgcataaaattcaaaccgttaatcggattttgacgccgttttcgcctacacgctcctgacacttagctctatcataatctacagaaatttcatgt 16935155  T
Q  411 ttca 414  Q
    ||||    
T  16935156 ttca 16935159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 311 - 414
Target Start/End: Original strand, 17005716 - 17005819
Alignment:
Q  311 tttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattcaagt 410  Q
    |||||| ||||||| |||||| ||||||| | ||| |||||||||||| ||| || | ||||||| |||||| ||||||||||||||||||| |||| ||    
T  17005716 tttcgcgcataaaattcaaaccgttaatcggattttgacgccgttttcgcctacacgctcctgacacttagctctatcataatctacagaaatttcatgt 17005815  T
Q  411 ttca 414  Q
    ||||    
T  17005816 ttca 17005819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 25877085 - 25876943
Alignment:
Q  81 caactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttg 180  Q
    |||| |||| ||||| ||||||||||| |||| |||| |||| || |||||| | | ||||  ||||||||||||||||||| ||||| ||| ||||||     
T  25877085 caacacaaggactcactagaccctttacacaatgttaattctctcataaaaagacccctagatggttaggataaagtccctatacttaggaataagtttt 25876986  T
Q  181 gaagcaattggagtgaagaaaaatgtctttttaaggtttctag 223  Q
    ||| ||||||||  |||||||| ||   |||||||||||||||    
T  25876985 gaaacaattggatcgaagaaaattgcaattttaaggtttctag 25876943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 437 - 518
Target Start/End: Original strand, 21245442 - 21245523
Alignment:
Q  437 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    ||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||  |||| |||| || |||| ||||||    
T  21245442 ccaaacctcacataatctcttgtttgcaaaaacgtttagactccgacttttcaagcttaaattccaacttccatcgacccaa 21245523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 437 - 518
Target Start/End: Complemental strand, 24273325 - 24273244
Alignment:
Q  437 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    ||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||  |||| |||| || |||| ||||||    
T  24273325 ccaaacctcacataatctcttgtttgcaaaaacgtttagactccgacttttcaagcttaaattccaacttccatcgacccaa 24273244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 311 - 418
Target Start/End: Original strand, 34877461 - 34877569
Alignment:
Q  311 tttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacaga-aaattcaag 409  Q
    |||||| | ||||| ||||||  ||||||||||||||| ||||||||| ||  || | ||||||| |||||| |||||||| |||||||| |||||||||    
T  34877461 tttcgcgcgtaaaattcaaaccattaatctgttttcgatgccgttttcgccaacacgctcctgacacttagctctatcatattctacagagaaattcaag 34877560  T
Q  410 tttcaacca 418  Q
    |||||||||    
T  34877561 tttcaacca 34877569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 682 - 855
Target Start/End: Original strand, 18822115 - 18822290
Alignment:
Q  682 aaaataataaagtccctagaatagttagtccgtttaa-tggaaca-ttaagtataactttattatgagaccccattaaacataaggaaactattctcaaa 779  Q
    ||||||||||||||  |||||| |||||| ||||||| ||||| | |||||| |  ||| ||  |||||| |||||||||| ||||| |||||||| |||    
T  18822115 aaaataataaagtctatagaattgttagttcgtttaaatggaaaaattaagtgtggcttaatcgtgagacaccattaaacacaaggacactattcttaaa 18822214  T
Q  780 gtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 855  Q
      ||  ||| |||||||||| |  |||||||||||||||||||||| | ||| ||||||||   ||||||||||||    
T  18822215 acatatgtaatcaagctttagtttgaagtgggatatcattaaagcagatagattattatgtcaatagactgatgat 18822290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 174 - 278
Target Start/End: Complemental strand, 9653882 - 9653778
Alignment:
Q  174 aagtttggaagcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgatttttcca 273  Q
    |||||||||| ||||||||   ||||||| ||  |||||||||||| |||   ||||  ||||| |||||||||| | ||||||||||||||||||||||    
T  9653882 aagtttggaaacaattggatcaaagaaaattgcatttttaaggtttttagaaagacaacatcgtggcacgttggttttccatcgtggcacgatttttcca 9653783  T
Q  274 gcatc 278  Q
    |||||    
T  9653782 gcatc 9653778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 14693566 - 14693634
Alignment:
Q  19 ttaattcaggctctctgaaacacaatataatcctcaacaactttctttcctaccccagggaccaactca 87  Q
    ||||||||| |||||||||||||  ||||||  |||||||||||| ||||||||||| |||||||||||    
T  14693566 ttaattcagactctctgaaacaccttataatagtcaacaactttcattcctaccccaaggaccaactca 14693634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 223
Target Start/End: Original strand, 8943107 - 8943229
Alignment:
Q  101 ccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaa 200  Q
    ||||| |||| ||| |||||||| | |||||||||| ||||  | ||||||||||||||||| || ||  || |||||||||| ||||||||   |||||    
T  8943107 cccttaatacgaagctatttcttccataaaaacatccctagatgattaggataaagtccctatacatagaaataagtttggaaacaattggatcaaagaa 8943206  T
Q  201 aaatgtctttttaaggtttctag 223  Q
    || ||  ||||||||||||||||    
T  8943207 aattgcatttttaaggtttctag 8943229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 223
Target Start/End: Complemental strand, 12636863 - 12636741
Alignment:
Q  101 ccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaa 200  Q
    ||||| |||| ||| |||||||| | |||||||||| ||||  | ||||||||||||||||| || ||  || |||||||||| ||||||||   |||||    
T  12636863 cccttaatacgaagctatttcttccataaaaacatccctagatgattaggataaagtccctatacatagaaataagtttggaaacaattggatcaaagaa 12636764  T
Q  201 aaatgtctttttaaggtttctag 223  Q
    || ||  ||||||||||||||||    
T  12636763 aattgcatttttaaggtttctag 12636741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 223
Target Start/End: Complemental strand, 12642617 - 12642495
Alignment:
Q  101 ccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaa 200  Q
    ||||| |||| ||| |||||||| | |||||||||| ||||  | ||||||||||||||||| || ||  || |||||||||| ||||||||   |||||    
T  12642617 cccttaatacgaagctatttcttccataaaaacatccctagatgattaggataaagtccctatacatagaaataagtttggaaacaattggatcaaagaa 12642518  T
Q  201 aaatgtctttttaaggtttctag 223  Q
    || ||  ||||||||||||||||    
T  12642517 aattgcatttttaaggtttctag 12642495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 282 - 403
Target Start/End: Complemental strand, 27366995 - 27366874
Alignment:
Q  282 agacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 381  Q
    ||||| |||||||||||| || ||||||||||||| | |||||| | ||| ||||| | |||||||| ||||||||| ||| || | || |||  | |||    
T  27366995 agacagcatcagattttcgaccttcacgttttcgcgcgtaaaaacccaaccgttaacccgttttcgatgccgttttcgcctacacgctcatgagacatag 27366896  T
Q  382 ccctatcataatctacagaaaa 403  Q
    | |||||||||||||| |||||    
T  27366895 ctctatcataatctaccgaaaa 27366874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 310 - 418
Target Start/End: Original strand, 8943466 - 8943574
Alignment:
Q  310 ttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattcaag 409  Q
    ||||||| |||||||||||||| |||| ||  ||||||| | ||||| | ||| |||| |||| || ||| || ||||||||||||||| ||| |||| |    
T  8943466 ttttcgcgcataaaaatcaaaccgttactccattttcgatgtcgtttccgcctacatgctcctaacacttggcactatcataatctacaaaaatttcatg 8943565  T
Q  410 tttcaacca 418  Q
    |||||||||    
T  8943566 tttcaacca 8943574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 437 - 518
Target Start/End: Original strand, 26904164 - 26904243
Alignment:
Q  437 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    ||||||||||||||||| ||||||||| |||||||||| ||  ||||||||||| ||||||  |||| || |||||||||||    
T  26904164 ccaaacctcacataatctcttatttgc-aaaacgtttatacttcgacttttcaaacgaaaactccaa-ttccatcaacccaa 26904243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 768 - 855
Target Start/End: Complemental strand, 12098705 - 12098618
Alignment:
Q  768 actattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 855  Q
    |||||| | ||||||| |||||||||| |||| |  ||| | |||||  | |||| |||||||||||||||||| |||||||||||||    
T  12098705 actatttttaaagtattcgtagtcaagttttaatatgaaattggatagtaataaaacatagagactattatgtatgtagactgatgat 12098618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 768 - 855
Target Start/End: Complemental strand, 18852146 - 18852059
Alignment:
Q  768 actattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 855  Q
    |||||||| |||||||  |||||| | |||||||| ||||| ||||| |||||||   || |||||||||||| |||||||| |||||    
T  18852146 actattcttaaagtatatgtagtccaactttattgtgaagtaggataacattaaattgtatagactattatgtcggtagactaatgat 18852059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 786 - 855
Target Start/End: Complemental strand, 22183552 - 22183483
Alignment:
Q  786 gtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 855  Q
    |||||||||||||| || |||   ||||| |||||||| ||||||||||||| || |||||| |||||||    
T  22183552 gtagtcaagctttagtgtgaaaatggataacattaaagtatagagactattacgtgggtagattgatgat 22183483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 211; Significance: 1e-115; HSPs: 66)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 44 - 505
Target Start/End: Original strand, 34301915 - 34302376
Alignment:
Q  44 tataatcctcaacaactttctttcctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtc 143  Q
    ||||||| | |||||||| | ||||||||||| ||||||||||| ||||||||||||| |||||||||| |||||||| |||||||||| ||||||||      
T  34301915 tataatcattaacaacttccattcctaccccaaggaccaactcatgaactcattagactctttatacaaggttatttccttcctaaaaatatctctagat 34302014  T
Q  144 ggttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacg 243  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||  |||||||||||| | || |||||  || || |||||    
T  34302015 ggttaggataaagtccctacacttaggaagaagtttggaagcatttggagtgaagaaaattgcatttttaaggtttatggtatgacatcattgtggcacg 34302114  T
Q  244 ttggtctcccatcgtggcacgatttttccagcatctctagacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgtt 343  Q
    ||||||||||||||||||||| |||||||||  |    ||||  | ||||||||||||| | ||||||||||| |||||||| ||| | ||||| | |||    
T  34302115 ttggtctcccatcgtggcacgttttttccagatttgacagacgacttcagattttcaacctgcacgttttcgcgcataaaaaccaagccgttaacccgtt 34302214  T
Q  344 ttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgatttccaaac 442  Q
    ||||| ||||||||| ||| || | |||| || |||||| |||||||||||||| | ||||||||||||||||||||||        |||||||||||||    
T  34302215 ttcgatgccgttttcgcctacacgctcctaacacttagctctatcataatctacggaaaaattcaagtttcaaccacccaaaaaaaatcgatttccaaac 34302314  T
Q  443 ctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaatt 505  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  34302315 ctcacataatctcttatttgc-aaaacgtttagacaccgacttttcaaacgaaaatcccaatt 34302376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 210; E-Value: 1e-114
Query Start/End: Original strand, 44 - 511
Target Start/End: Original strand, 23450837 - 23451305
Alignment:
Q  44 tataatcctcaacaactttctttcctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtc 143  Q
    ||||||| | |||||||| | ||||||||||| ||||||||||| ||||||||||||| |||||||||| |||||||| |||||||||| ||||||||      
T  23450837 tataatcattaacaacttccattcctaccccaaggaccaactcatgaactcattagactctttatacaaggttatttccttcctaaaaatatctctagat 23450936  T
Q  144 ggttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacg 243  Q
    ||||||||||||||||||||||||| ||||||||||||||| | ||||||| ||||||| ||  |||||| ||||||| || ||||| |||||| |||||    
T  23450937 ggttaggataaagtccctacacttaggaagaagtttggaagtatttggagttaagaaaattgcatttttatggtttcttgtatgacataatcgtggcacg 23451036  T
Q  244 ttggtctcccatcgtggcacgatttttccagcatctctagacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgtt 343  Q
    |||||||||||||||||||||||||||||||  |    ||||  | || |||||| ||||||||||||||||| | |||||||||||| |||||   |||    
T  23451037 ttggtctcccatcgtggcacgatttttccagatttgacagacgacttctgatttttaacattcacgttttcgcgcgtaaaaatcaaaccgttaactcgtt 23451136  T
Q  344 ttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacag-aaaattcaagtttcaaccacccnnnnnnnntcga-tttccaaa 441  Q
    ||||| ||||||||| ||| || | ||||||| |||| | |||||||||||||||| ||||||||||||||||||||||        |||| ||||||||    
T  23451137 ttcgatgccgttttcgcctacacgctcctgacacttaactctatcataatctacagaaaaattcaagtttcaaccacccaaaaaaaatcgattttccaaa 23451236  T
Q  442 cctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatc 511  Q
    |||||||||||| ||||||||| |||||||||||||||||||||||||| | ||||||||||||| ||||    
T  23451237 cctcacataatctcttatttgc-aaaacgtttagacaccgacttttcaaactaaaatcccaatttccatc 23451305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 648 - 855
Target Start/End: Original strand, 21940665 - 21940872
Alignment:
Q  648 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgag 747  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  21940665 acaatgcatttctttattgattttgttttgtttcaaaataataaagttcctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 21940764  T
Q  748 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 847  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21940765 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 21940864  T
Q  848 ctgatgat 855  Q
    ||||||||    
T  21940865 ctgatgat 21940872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 650 - 855
Target Start/End: Original strand, 22171491 - 22171694
Alignment:
Q  650 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgagac 749  Q
    |||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||    
T  22171491 aaggcatttccttattgattttgttttatttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 22171590  T
Q  750 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 849  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  22171591 cccattaaacata--gaaactattctcaaagtatccgtagtcaagctttattgagaagtggaatatcattaaagcatagagactattatgtaggtagact 22171688  T
Q  850 gatgat 855  Q
    ||||||    
T  22171689 gatgat 22171694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 654 - 855
Target Start/End: Original strand, 6094129 - 6094330
Alignment:
Q  654 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgagacccca 753  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||     
T  6094129 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 6094228  T
Q  754 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 853  Q
    |||||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| |||||    
T  6094229 ttaaacataaggaaactatttttaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatatgggtagagtgatg 6094328  T
Q  854 at 855  Q
    ||    
T  6094329 at 6094330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 44 - 511
Target Start/End: Original strand, 24495949 - 24496436
Alignment:
Q  44 tataatcctcaacaactttctttcctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtc 143  Q
    ||||||| | |||||||| | ||||||||||| |||||  |||| |||||||||||||||||||||||| |||||||| || ||||||||||||||||      
T  24495949 tataatcattaacaacttccattcctaccccaaggaccggctcatgaactcattagaccctttatacaaggttatttcctttctaaaaacatctctagat 24496048  T
Q  144 ggttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacg 243  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||  |||||||||||||| || |||||  ||||| |||||    
T  24496049 ggttaggataaagtccctacacttaggaagaagtttggaagcatttggagtgaagaaaattgcatttttaaggtttctggtatgacatcatcgtggcacg 24496148  T
Q  244 ttggtctcccatcgtggcacga-tttttccagcatctctagacatcatcagattttcaacattcacgttt------------------tcgctcataaaa 324  Q
    |||||||||||||||| ||||| |||||||||  |    ||||  | ||||||||||||| |||||||||                  |||| |||||||    
T  24496149 ttggtctcccatcgtgacacgattttttccagatttgacagacgacttcagattttcaaccttcacgttttcgcgcataaaaacctaatcgcgcataaaa 24496248  T
Q  325 atcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacag-aaaattcaagtttcaaccacccnn 423  Q
    | | ||| ||||| | |||||||| | ||||||| ||| || | ||||||| |||||| |||||||||||||||| |||||||||||||||||||||       
T  24496249 acctaaccgttaacccgttttcgatggcgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaattcaagtttcaaccacctaa 24496348  T
Q  424 nnnnnntcgatttc-caaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatc 511  Q
          |||||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||    
T  24496349 aaaaaatcgatttcacaaacctcacataatctcttatttgc-aaaacgtttagacaccgacttttcaaacgaaaatcccaatttccatc 24496436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 650 - 849
Target Start/End: Original strand, 28554885 - 28555084
Alignment:
Q  650 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgagac 749  Q
    |||||||||||||||||||||||||| |||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  28554885 aaggcatttctttattgattttgtttagtttcaaaataataaaatacctaaaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 28554984  T
Q  750 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 849  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28554985 cccattaaacataatgaaactattctaaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 28555084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 162; E-Value: 5e-86
Query Start/End: Original strand, 654 - 855
Target Start/End: Original strand, 24642655 - 24642856
Alignment:
Q  654 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgagacccca 753  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||     
T  24642655 catttctttattgattttgttttgtttcaaaatcataaagtccctagaattgttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 24642754  T
Q  754 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 853  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||    
T  24642755 ttaaacataaggaaactattcttaaagtattcgtagtcaagctttattgagaagtgagatatcattaaagtatagagactattatgtgggtagactgatg 24642854  T
Q  854 at 855  Q
    ||    
T  24642855 at 24642856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 282 - 518
Target Start/End: Complemental strand, 22584103 - 22583869
Alignment:
Q  282 agacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 381  Q
    ||||||||| ||||||||||| |||||||||| || |||||||| ||||| |||||||| ||||||| ||||||||||||| |||||||||||| |||||    
T  22584103 agacatcattagattttcaaccttcacgtttttgcgcataaaaaacaaaccgttaatctattttcgatgccgttttcacctacatgttcctgacacttag 22584004  T
Q  382 ccctatcataatctac-agaaaattcaagtttcaaccacccnnnnnnnntcgatttccaaacctcacataatcccttatttgcaaaaacgtttagacacc 480  Q
    |||||||||||||||| | ||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22584003 ccctatcataatctacaaaaaaattcaagtttcaaccaccc---aaaaatcgatttccaaacctcacataatcccttatttgcaaaaacgtttagacacc 22583907  T
Q  481 gacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    |||||||||||||||||||||||||| |||||||||||    
T  22583906 gacttttcaagcgaaaatcccaatttccatcaacccaa 22583869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 137; E-Value: 4e-71
Query Start/End: Original strand, 282 - 518
Target Start/End: Original strand, 23889409 - 23889642
Alignment:
Q  282 agacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 381  Q
    ||||| ||||| ||||||||| ||||| ||||||| ||| |||||||||| |||||||||||||||| ||||||||||||| ||||||||| |   ||||    
T  23889409 agacaacatcaaattttcaaccttcacattttcgcgcattaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgttcctaatatttag 23889508  T
Q  382 ccctatcataatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgatttccaaacctcacataatcccttatttgcaaaaacgtttagacacc 480  Q
    |||||||||||||||||| ||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23889509 ccctatcataatctacagaaaaattcaagtttcaaccaccc----aaaatcgatttccaaacctcacataatcccttatttgcaaaaacgtttagacacc 23889604  T
Q  481 gacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    || |||||||||||||||| |||||| |||||||||||    
T  23889605 gatttttcaagcgaaaatctcaatttccatcaacccaa 23889642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 54 - 270
Target Start/End: Original strand, 23889115 - 23889331
Alignment:
Q  54 aacaactttctttcctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggata 153  Q
    |||||||| | |||||||||||  | ||||||||  ||||||||||||| ||||||||||||||||||||||||||||| ||||||||  ||||||||||    
T  23889115 aacaacttccattcctaccccaaagtccaactcacaaactcattagaccatttatacaaagttatttctttcctaaaaatatctctagatggttaggata 23889214  T
Q  154 aagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctccc 253  Q
    ||||||||||||||| |||||||||||||||||||||||||||| |||| ||  |||||||||||||| |  |||||| ||||| |||||||||||||||    
T  23889215 aagtccctacacttaggaagaagtttggaagcaattggagtgaataaaattgcatttttaaggtttcttggatgacagcatcgtggcacgttggtctccc 23889314  T
Q  254 atcgtggcacgattttt 270  Q
    |||||||||||||||||    
T  23889315 atcgtggcacgattttt 23889331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 130; E-Value: 7e-67
Query Start/End: Original strand, 54 - 274
Target Start/End: Complemental strand, 22584395 - 22584177
Alignment:
Q  54 aacaactttctttcctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggata 153  Q
    |||||||| | |||||||||||   ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  22584395 aacaacttccattcctaccccaaataccaactcacgaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagatggttaggata 22584296  T
Q  154 aagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctccc 253  Q
    || |||||||||||| ||||||||||||||||||||| |||||||||||  |  |||||||||||||| |  |||||| ||||| |  ||||||||||||    
T  22584295 aaatccctacacttaggaagaagtttggaagcaattgaagtgaagaaaatggcatttttaaggtttcttggatgacagcatcgtgg--cgttggtctccc 22584198  T
Q  254 atcgtggcacgatttttccag 274  Q
    |||||||||||||||||||||    
T  22584197 atcgtggcacgatttttccag 22584177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 125; E-Value: 6e-64
Query Start/End: Original strand, 290 - 556
Target Start/End: Original strand, 3273499 - 3273756
Alignment:
Q  290 tcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatca 389  Q
    ||||||||||||| ||||||||| ||| |||||||| ||||  ||||| | ||||| || ||||||||| ||| || | ||||||| |||||| ||||||    
T  3273499 tcagattttcaaccttcacgtttccgcgcataaaaaccaaatcgttaacccgtttttgatgccgttttcgcctacacgctcctgacacttagctctatca 3273598  T
Q  390 taatctacaga-aaattcaagtttcaaccacccnnnnnnnntcgatttccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttc 488  Q
    || |||||||| |||||||||||||||||||||        ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  3273599 tattctacagataaattcaagtttcaaccacccaaaaaaaatcgatttccaaacctcacatactcccttatttgcaaaaacgtttagacaccaacttttc 3273698  T
Q  489 aagcgaaaatcccaattttcatcaacccaatgtaacccaaccccaaaactggttctaatcattgtact 556  Q
    |||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||    
T  3273699 aagcgaaaatcccaattttcatc----------aacccaaccccaaaactggttctaatcattgtact 3273756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 29 - 215
Target Start/End: Original strand, 3273304 - 3273490
Alignment:
Q  29 ctctctgaaacacaatataatcctcaacaactttctttcctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttccta 128  Q
    ||||||||| | || ||||||| | |||||||||| ||| ||||||| ||||||||||| |||||||||||||||||||||||| |||||||| ||||||    
T  3273304 ctctctgaacctcattataatcattaacaactttcattcataccccaaggaccaactcatgaactcattagaccctttatacaaggttatttccttccta 3273403  T
Q  129 aaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaag 215  Q
    |||||||||||||  ||||||||||||||| ||||||||  ||||||||||||||||| ||||||||||||||| ||  ||||||||    
T  3273404 aaaacatctctagatggttaggataaagtctctacactttggaagaagtttggaagcatttggagtgaagaaaattgcatttttaag 3273490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 654 - 781
Target Start/End: Original strand, 24636860 - 24636987
Alignment:
Q  654 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgagacccca 753  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||     
T  24636860 catttctttcttgattttgttttgtttcaaaataataaagtccctagaatagttagtccttttaatggaacattaagtataacttaattgtgagaccccg 24636959  T
Q  754 ttaaacataaggaaactattctcaaagt 781  Q
    |||||||||||||||||||||| |||||    
T  24636960 ttaaacataaggaaactattcttaaagt 24636987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 81 - 273
Target Start/End: Original strand, 5080552 - 5080744
Alignment:
Q  81 caactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttg 180  Q
    |||| |||| ||||| |||||||| |||||||||||||||||||| ||||| || |  |||  ||||||||||||||||||||||||| ||| |||||||    
T  5080552 caacacaaggactcactagaccctctatacaaagttatttctttcataaaagcacccgtagatggttaggataaagtccctacacttaggaataagtttg 5080651  T
Q  181 gaagcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgatttttcca 273  Q
    ||| |||||||| | ||||||| ||  |||||||||||||| ||||| ||||||||| |||||||||| ||||||||||||||||||||||||    
T  5080652 gaaacaattggattaaagaaaattgcatttttaaggtttcttgtgtggcagaatcgtggcacgttggtatcccatcgtggcacgatttttcca 5080744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 84 - 270
Target Start/End: Complemental strand, 17611978 - 17611792
Alignment:
Q  84 ctcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaa 183  Q
    ||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||  || || ||||||||||||||||||| ||||||||||||||    
T  17611978 ctcaacaactcattagaccttttatacaacgttatttctttcctaaaaacatctctagatggataagataaagtccctacacttaggaagaagtttggaa 17611879  T
Q  184 gcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgattttt 270  Q
    ||||||||||||||||||||||  |||| || |||||| ||  | || ||||||||| || |  || |||||||| | |||||||||    
T  17611878 gcaattggagtgaagaaaaatgcattttaaaagtttctggtcaggcaaaatcgtagcccgattttcccccatcgtagtacgattttt 17611792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 283 - 518
Target Start/End: Original strand, 26220156 - 26220390
Alignment:
Q  283 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 382  Q
    |||| ||||||||||||| | ||||||||||||| | |||||||||||| ||||| | |||||||| ||||||||  ||| |  | ||||||| ||||||    
T  26220156 gacagcatcagattttcacccttcacgttttcgcgcctaaaaatcaaaccgttaacccgttttcgatgccgtttttgcctacgcgctcctgacacttagc 26220255  T
Q  383 cctatcataatctacagaaaa-ttcaagtttcaaccacccnnnnnnnntcgatttccaaa-cctcacataatcccttatttgcaaaaacgtttagacacc 480  Q
     |||||||||||||||||||| ||  ||||||||||||||        | | |||||||| |||||||||||| || |||||||||||| ||||||||||    
T  26220256 tctatcataatctacagaaaaatttcagtttcaaccacccaaaaa---ttggtttccaaaacctcacataatcactcatttgcaaaaacatttagacacc 26220352  T
Q  481 gacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  26220353 gactcttcaagcgaaaatcccaattttcatcaatccaa 26220390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 54 - 221
Target Start/End: Original strand, 26219926 - 26220093
Alignment:
Q  54 aacaactttctttcctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggata 153  Q
    ||||||| || ||||||||| |  |||||||||| |||||||||||||||||||||||| ||||| || ||||||||||||||||| |  ||||||||||    
T  26219926 aacaactatcattcctacccgaaagaccaactcatgaactcattagaccctttatacaaggttatctccttcctaaaaacatctctggatggttaggata 26220025  T
Q  154 aagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggtttct 221  Q
    |||| |||||||||| |||||||| ||||| || ||||||||||||||| ||  ||||||||||||||    
T  26220026 aagttcctacacttaagaagaagtctggaaacatttggagtgaagaaaattgcatttttaaggtttct 26220093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 65 - 221
Target Start/End: Complemental strand, 26222968 - 26222812
Alignment:
Q  65 ttcctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctaca 164  Q
    ||||||||| |  |||||||||| |||||||||||||||||||||||| ||||| || |||||||||||||||||||  |||||||||||||| ||||||    
T  26222968 ttcctacccgaaagaccaactcatgaactcattagaccctttatacaaggttatctccttcctaaaaacatctctagatggttaggataaagttcctaca 26222869  T
Q  165 cttatgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggtttct 221  Q
    |||| ||||| || ||||| || ||||||||||||||| ||  ||||||||||||||    
T  26222868 cttaagaagatgtctggaaacatttggagtgaagaaaattgcatttttaaggtttct 26222812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 67 - 202
Target Start/End: Original strand, 23825626 - 23825759
Alignment:
Q  67 cctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacact 166  Q
    ||||||||| |||||| |||| |||||||||||||| ||||||||| ||||| |||||||||||||||||||||  || |||||||||||||||||||||    
T  23825626 cctaccccaaggacca-ctcatgaactcattagacc-tttatacaacgttatatctttcctaaaaacatctctatacgtttaggataaagtccctacact 23825723  T
Q  167 tatgaagaagtttggaagcaattggagtgaagaaaa 202  Q
    || ||||||||||||||||| |||||||||||||||    
T  23825724 taggaagaagtttggaagcatttggagtgaagaaaa 23825759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 282 - 511
Target Start/End: Complemental strand, 17611735 - 17611507
Alignment:
Q  282 agacatcatcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactctta 380  Q
    ||||| |||||||||||| ||  |||||||||||||   |||||  ||||| ||||| | |||||||| ||||||||| ||| || | ||||||| ||||    
T  17611735 agacaacatcagattttctaattttcacgttttcgcgtgtaaaatccaaaccgttaacccgttttcgatgccgttttcgcctacacgctcctgacactta 17611636  T
Q  381 gccctatcataatctacagaaa-attcaagtttcaaccacccnnnnnnnntcgatttcc-aaacctcacataatcccttatttgcaaaaacgtttagaca 478  Q
     | ||||||||||||||| ||| |||||||||||||||||||        ||||||||| ||||||||||||||| ||||||||||||| ||||||||||    
T  17611635 actctatcataatctacaaaaagattcaagtttcaaccacccaaaaa---tcgatttcccaaacctcacataatctcttatttgcaaaa-cgtttagaca 17611540  T
Q  479 ccgacttttcaagcgaaaatcccaattttcatc 511  Q
    |||||| ||||| ||||||||||||||| ||||    
T  17611539 ccgactattcaaacgaaaatcccaatttccatc 17611507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 67 - 274
Target Start/End: Complemental strand, 30766634 - 30766429
Alignment:
Q  67 cctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacact 166  Q
    ||||||||| |||||| |||| |||||  |||||||||| |||||| ||||| ||||||||||||||||| |||   | ||||||||| |||||||||||    
T  30766634 cctaccccaaggacca-ctcatgaacttgttagaccctt-atacaacgttatatctttcctaaaaacatccctatatgtttaggataaggtccctacact 30766537  T
Q  167 tatgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgat 266  Q
    || ||||||||||||||||| ||||||||||||||| ||  ||||||  || | | |  |||||  ||||| ||||||| || |||||||||||||||||    
T  30766536 taggaagaagtttggaagcatttggagtgaagaaaattgcatttttagagtatattggatgacaacatcgtggcacgttagtatcccatcgtggcacgat 30766437  T
Q  267 ttttccag 274  Q
    ||||||||    
T  30766436 ttttccag 30766429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 437 - 518
Target Start/End: Complemental strand, 22532426 - 22532345
Alignment:
Q  437 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  22532426 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgactcttctagcgaaaatcccaattttcatcaacccaa 22532345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 437 - 518
Target Start/End: Complemental strand, 22537111 - 22537030
Alignment:
Q  437 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  22537111 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgactcttctagcgaaaatcccaattttcatcaacccaa 22537030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 67 - 202
Target Start/End: Original strand, 3698088 - 3698221
Alignment:
Q  67 cctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacact 166  Q
    ||||||||| ||||||  ||| ||||||||||||||||| | |||| ||||| |||||||||| ||||||||||  || |||||||||||||||||||||    
T  3698088 cctaccccaaggaccat-tcatgaactcattagacccttaa-acaacgttatatctttcctaagaacatctctatacgtttaggataaagtccctacact 3698185  T
Q  167 tatgaagaagtttggaagcaattggagtgaagaaaa 202  Q
    || ||||||||||||||||| |||||||||||||||    
T  3698186 taggaagaagtttggaagcatttggagtgaagaaaa 3698221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 342 - 515
Target Start/End: Original strand, 24979780 - 24979951
Alignment:
Q  342 ttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaa-ttcaagtttcaaccacccnnnnnnnntcgatttcc-a 439  Q
    ||||||| ||||||||| ||| || | ||||||| |||||| |||||||||||||||||||| ||||||||||||||||||        | ||||||| |    
T  24979780 ttttcgatgccgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaattcaagtttcaaccacccaaaaa---ttgatttccca 24979876  T
Q  440 aacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacc 515  Q
    |||||||||||||| ||||||||||||| |||||||||||| | ||||||| ||||||||||||||| ||||||||    
T  24979877 aacctcacataatctcttatttgcaaaa-cgtttagacaccaatttttcaaacgaaaatcccaatttccatcaacc 24979951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 437 - 518
Target Start/End: Complemental strand, 39694572 - 39694491
Alignment:
Q  437 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  39694572 ccaaacctcacataatcccttatttgcaaaaatgtttagacaccgacttttcaagcgaaaatctcaactttcatcaacccaa 39694491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 146 - 274
Target Start/End: Complemental strand, 16039906 - 16039778
Alignment:
Q  146 ttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgtt 245  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||| ||  ||||| |||||| | ||   |||| ||||| |||||||    
T  16039906 ttaggataaagtccctacacttaggaagaagtttggaaccaattggagcgaagaaaattgcatttttgaggtttttggtcaaacagcatcgtggcacgtt 16039807  T
Q  246 ggtctcccatcgtggcacgatttttccag 274  Q
    ||| ||||||||||||||| |||||||||    
T  16039806 ggtttcccatcgtggcacgctttttccag 16039778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 288 - 393
Target Start/End: Original strand, 5080825 - 5080930
Alignment:
Q  288 catcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctat 387  Q
    ||||||||||||||| | || |||||||| |||||||||||||| |||||||||||||||| ||||||||||||| |||||||||| | |||||  ||||    
T  5080825 catcagattttcaacctacatgttttcgcgcataaaaatcaaactgttaatctgttttcgatgccgttttcacctacatgttcctgccacttagtactat 5080924  T
Q  388 cataat 393  Q
    ||||||    
T  5080925 cataat 5080930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 289 - 416
Target Start/End: Original strand, 273879 - 274007
Alignment:
Q  289 atcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatc 388  Q
    |||||||||||||| | ||||||||||| |||||||||||||| ||||||| |||||||| ||||||||||||| |||| |||| || |||||  |||||    
T  273879 atcagattttcaacctccacgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcacctacatgctcctaacacttagtactatc 273978  T
Q  389 ataatctacag-aaaattcaagtttcaac 416  Q
    |||||  |||| ||||| |||||||||||    
T  273979 ataatgcacagaaaaatccaagtttcaac 274007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 289 - 416
Target Start/End: Complemental strand, 641970 - 641842
Alignment:
Q  289 atcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatc 388  Q
    |||||||||||||| | ||||||||||| |||||||||||||| ||||||| |||||||| ||||||||||||| |||| |||| || |||||  |||||    
T  641970 atcagattttcaacctccacgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcacctacatgctcctaacacttagtactatc 641871  T
Q  389 ataatctacag-aaaattcaagtttcaac 416  Q
    |||||  |||| ||||| |||||||||||    
T  641870 ataatgcacagaaaaatccaagtttcaac 641842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 307 - 418
Target Start/End: Complemental strand, 13721567 - 13721456
Alignment:
Q  307 acgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattc 406  Q
    |||||||||| |||||||||||||| ||||||| |||||||| ||||||||| ||| |||| |||| || ||| || ||||||||||||||| ||| |||    
T  13721567 acgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcgcctacatgctcctaacacttggcactatcataatctacaaaaatttc 13721468  T
Q  407 aagtttcaacca 418  Q
    | ||||||||||    
T  13721467 atgtttcaacca 13721456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 437 - 515
Target Start/End: Complemental strand, 44522470 - 44522393
Alignment:
Q  437 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacc 515  Q
    |||||||||||||| || ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| ||||    
T  44522470 ccaaacctcacatagtctcttatttgcaaaa-cgtttagacaccgacttttcaagggaaaatcccaattttcattaacc 44522393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 289 - 416
Target Start/End: Complemental strand, 827776 - 827648
Alignment:
Q  289 atcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatc 388  Q
    ||||||||||  || | ||||||||||| |||||||||||||| ||||||| |||||||| ||||||||||||| |||| |||| || |||||  |||||    
T  827776 atcagattttggacctccacgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcacctacatgctcctaacacttagtactatc 827677  T
Q  389 ataatctacag-aaaattcaagtttcaac 416  Q
    |||||  |||| ||||| |||||||||||    
T  827676 ataatgcacagaaaaatccaagtttcaac 827648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 660 - 852
Target Start/End: Complemental strand, 38232570 - 38232380
Alignment:
Q  660 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgagaccccattaaac 759  Q
    ||||||||||||||||| ||||||||||||||| || ||||||||||||||| |||||||  |   ||| ||||||||| || |||| || |||||||||    
T  38232570 tttattgattttgttttatttcaaaataataaa-tctctagaatagttagtctgtttaataaatttttaggtataacttaatcatgacactccattaaac 38232472  T
Q  760 ataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgat 852  Q
     |||  | | |||||| |||||||  |||||||| ||||||||  ||||| ||||   |||||||||| | |||||| ||| |||||||||||    
T  38232471 gtaa-aatagtattcttaaagtatttgtagtcaaactttattgtaaagtgagatagtcttaaagcataaaaactattttgtgggtagactgat 38232380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 307 - 418
Target Start/End: Complemental strand, 16873690 - 16873579
Alignment:
Q  307 acgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattc 406  Q
    |||||||||| |||||||||||||| ||||||| |||||||| ||||||||| ||| |||| |||| || ||| || |||||||||| |||| ||| |||    
T  16873690 acgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcgcctacatgctcctaacacttggcactatcataatttacaaaaatttc 16873591  T
Q  407 aagtttcaacca 418  Q
    | ||||||||||    
T  16873590 atgtttcaacca 16873579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 553 - 612
Target Start/End: Original strand, 21940570 - 21940629
Alignment:
Q  553 tactgtttgaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  21940570 tactgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 21940629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 288 - 421
Target Start/End: Complemental strand, 26222724 - 26222590
Alignment:
Q  288 catcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctat 387  Q
    ||||||||||||| | |||| |||||||| | |||||||||||| ||||| | |||||||| ||||||||| ||| |  | ||||||| |||||| ||||    
T  26222724 catcagattttcacccttcatgttttcgcgcctaaaaatcaaaccgttaacccgttttcgatgccgttttcgcctacgcgctcctgacacttagctctat 26222625  T
Q  388 cataatctacag-aaaattcaagtttcaaccaccc 421  Q
    || ||||||||| ||||||  ||||||||||||||    
T  26222624 cacaatctacagaaaaatttcagtttcaaccaccc 26222590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 282 - 403
Target Start/End: Complemental strand, 16039704 - 16039583
Alignment:
Q  282 agacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 381  Q
    ||||| ||| ||||||||||| |  |||||||||| ||||||||||||||  |||||| |||||||| | ||||||||||| |||| |||| || |||||    
T  16039704 agacagcatgagattttcaacttctacgttttcgcgcataaaaatcaaaccattaatccgttttcgatgtcgttttcacctacatgctcctaacacttag 16039605  T
Q  382 ccctatcataatctacagaaaa 403  Q
    | ||||||||||  ||||||||    
T  16039604 cactatcataatgcacagaaaa 16039583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 437 - 518
Target Start/End: Original strand, 32950661 - 32950742
Alignment:
Q  437 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    ||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||  |||| |||| || |||||||||||    
T  32950661 ccaaacctcacataatctcttgtttgcaaaaacgtttagactccgacttttcaagcttaaattccaacttccatcaacccaa 32950742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 556 - 612
Target Start/End: Original strand, 22070108 - 22070164
Alignment:
Q  556 tgtttgaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  22070108 tgttggaataagccctaatagccaatctatattgattgggtttggttttgtatcatg 22070164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 555 - 612
Target Start/End: Original strand, 6094030 - 6094087
Alignment:
Q  555 ctgtttgaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    ||||| || |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  6094030 ctgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatcatg 6094087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 146 - 223
Target Start/End: Complemental strand, 13721878 - 13721801
Alignment:
Q  146 ttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggtttctag 223  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||   ||||||| ||  ||||||||||||||||    
T  13721878 ttaggataaagtccctacacttaggaagaagtttggaagtaattggatcaaagaaaattgcatttttaaggtttctag 13721801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 304 - 416
Target Start/End: Original strand, 20481057 - 20481170
Alignment:
Q  304 ttcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaa 403  Q
    |||| |||||||| | |||||| ||||| ||||| | |||||||| ||||||||| ||| |||| ||||||| |||| ||||||| |||| |||||||||    
T  20481057 ttcaagttttcgcgcgtaaaaaccaaaccgttaacccgttttcgatgccgttttcgcctacatgctcctgacacttaaccctatcttaatgtacagaaaa 20481156  T
Q  404 -ttcaagtttcaac 416  Q
     |||||||||||||    
T  20481157 attcaagtttcaac 20481170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 318 - 418
Target Start/End: Complemental strand, 3431910 - 3431810
Alignment:
Q  318 cataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattcaagtttcaacc 417  Q
    |||||||||||||| ||||||| |||||||| ||||||||| ||| |||| |||| || |||  | ||||||||||||||| ||| |||| |||||||||    
T  3431910 cataaaaatcaaaccgttaatccgttttcgatgccgttttcgcctacatgctcctaacacttgacactatcataatctacaaaaatttcatgtttcaacc 3431811  T
Q  418 a 418  Q
    |    
T  3431810 a 3431810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 556 - 612
Target Start/End: Original strand, 22171396 - 22171452
Alignment:
Q  556 tgtttgaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    |||| |||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  22171396 tgttggaataagccctaatagccaatctatattgattgggtttgattttgtatcatg 22171452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 289 - 393
Target Start/End: Complemental strand, 24386560 - 24386456
Alignment:
Q  289 atcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatc 388  Q
    |||||||||||||| |  || ||||||| |||||||||||||| ||||||| |||||||| | ||||||||||| |||| || | || |||||| |||||    
T  24386560 atcagattttcaacttctacattttcgcgcataaaaatcaaaccgttaatccgttttcgatgtcgttttcacctacatgctcttaacacttagcactatc 24386461  T
Q  389 ataat 393  Q
    |||||    
T  24386460 ataat 24386456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 564 - 608
Target Start/End: Original strand, 24642564 - 24642608
Alignment:
Q  564 taagccctaatagccaatctatattgattgggtttggctttgtat 608  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  24642564 taagccctaatagccaatctatattgattgggtttggctttgtat 24642608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 564 - 612
Target Start/End: Original strand, 28554799 - 28554847
Alignment:
Q  564 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||    
T  28554799 taagccctaatagccaatctttgttgattgggtttggctttgtatcatg 28554847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 669 - 852
Target Start/End: Original strand, 2375027 - 2375208
Alignment:
Q  669 tttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgagaccccattaaacataaggaaa 768  Q
    |||||||||||||||||||||||| |||||| |||| ||||||  |||||||||||||| |  || |||| || |||| | ||||||||||||| | | |    
T  2375027 tttgttttgtttcaaaataataaactccctataataattagtcaatttaatggaacatttatgatgacttaatcatga-aacccattaaacatacgaata 2375125  T
Q  769 ctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgat 852  Q
     |||| | |||||||  ||||||| | ||||||| | |||| |||| |||||||| |||   ||||||| || |||||| ||||    
T  2375126 ttatttttaaagtatatgtagtcacgatttattgcg-agtgagataacattaaagtatatgaactattaagtgggtagattgat 2375208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 311 - 418
Target Start/End: Original strand, 17501807 - 17501914
Alignment:
Q  311 tttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattcaagt 410  Q
    |||||| | ||||| |||||| ||||||| | ||| || ||||||||| ||| || |  |||||| ||| || ||||||||||||||||||| |||||||    
T  17501807 tttcgcgcgtaaaattcaaaccgttaatcggattttgatgccgttttcgcctacacgcccctgacacttggctctatcataatctacagaaatttcaagt 17501906  T
Q  411 ttcaacca 418  Q
    ||||||||    
T  17501907 ttcaacca 17501914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 223
Target Start/End: Complemental strand, 3432277 - 3432155
Alignment:
Q  101 ccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaa 200  Q
    ||||| |||| ||| |||||||| | |||||||||| ||||  | ||||||||||||||||| || ||  || |||||||||| ||||||||   |||||    
T  3432277 cccttaatacgaagctatttcttccataaaaacatccctagatgattaggataaagtccctatacatagaaataagtttggaaacaattggatcaaagaa 3432178  T
Q  201 aaatgtctttttaaggtttctag 223  Q
    || ||  ||||||||||||||||    
T  3432177 aattgcatttttaaggtttctag 3432155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 192
Target Start/End: Complemental strand, 16874000 - 16873954
Alignment:
Q  146 ttaggataaagtccctacacttatgaagaagtttggaagcaattgga 192  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||    
T  16874000 ttaggataaagtccctacacttaggaagaagtttggaagtaattgga 16873954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 678 - 839
Target Start/End: Complemental strand, 32873019 - 32872857
Alignment:
Q  678 tttcaaaataataaagtccctagaatagttagtccgttta-atggaacattaagtataactttattatgagaccccattaaacataaggaaactattctc 776  Q
    ||||||||||||||||||| || |||||||  ||| |||| || ||||||||||||| |||| ||| ||||| | |||| || | |  || | || | |     
T  32873019 tttcaaaataataaagtccttataatagttcatccatttatatagaacattaagtatgacttaattgtgagatctcattgaaaagagtgacaatactatt 32872920  T
Q  777 aaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatg 839  Q
    ||| |||  ||||| ||| ||||||| ||||||||||| ||| ||||||||||||||||||||    
T  32872919 aaaatatttgtagttaagatttattgtgaagtgggataacatcaaagcatagagactattatg 32872857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 274
Target Start/End: Original strand, 273670 - 273798
Alignment:
Q  146 ttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgtt 245  Q
    ||||||||||||||||| |||||  || |||||||||| ||||||||   ||||||| ||  |||||||||||| |      |||| ||||| |||| ||    
T  273670 ttaggataaagtccctatacttagaaataagtttggaaacaattggatcaaagaaaattgcatttttaaggtttttgaaaaaacagcatcgtggcacatt 273769  T
Q  246 ggtctcccatcgtggcacgatttttccag 274  Q
    ||| ||||||||||| |||||||||||||    
T  273770 ggtttcccatcgtggaacgatttttccag 273798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 274
Target Start/End: Complemental strand, 642179 - 642051
Alignment:
Q  146 ttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgtt 245  Q
    ||||||||||||||||| |||||  || |||||||||| ||||||||   ||||||| ||  |||||||||||| |      |||| ||||| |||| ||    
T  642179 ttaggataaagtccctatacttagaaataagtttggaaacaattggatcaaagaaaattgcatttttaaggtttttgaaaaaacagcatcgtggcacatt 642080  T
Q  246 ggtctcccatcgtggcacgatttttccag 274  Q
    ||| ||||||||||| |||||||||||||    
T  642079 ggtttcccatcgtggaacgatttttccag 642051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 274
Target Start/End: Complemental strand, 827985 - 827857
Alignment:
Q  146 ttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgtt 245  Q
    ||||||||||||||||| |||||  || |||||||||| ||||||||   ||||||| ||  |||||||||||| |      |||| ||||| |||| ||    
T  827985 ttaggataaagtccctatacttagaaataagtttggaaacaattggatcaaagaaaattgcatttttaaggtttttgaaaaaacagcatcgtggcacatt 827886  T
Q  246 ggtctcccatcgtggcacgatttttccag 274  Q
    ||| ||||||||||| |||||||||||||    
T  827885 ggtttcccatcgtggaacgatttttccag 827857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 205
Target Start/End: Original strand, 20480800 - 20480901
Alignment:
Q  104 tttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaa 203  Q
    |||| |||| |||| ||||||| |||||||| | ||||  | |||||||||| ||||||||||||  || |||||||||| ||||| |  ||||||||||    
T  20480800 tttacacaaggttaattctttcataaaaacacccctagatgattaggataaactccctacacttagaaataagtttggaaacaatttggttgaagaaaaa 20480899  T
Q  204 tg 205  Q
    ||    
T  20480900 tg 20480901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 282 - 403
Target Start/End: Complemental strand, 30766355 - 30766234
Alignment:
Q  282 agacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 381  Q
    ||||| |||||||||||| || ||||||||||||| | |||||| | ||| ||||| | |||||| | ||||||||| ||| || | || |||  | |||    
T  30766355 agacagcatcagattttcgaccttcacgttttcgcgcgtaaaaacccaaccgttaacccgttttcaatgccgttttcgcctacacgctcatgagacatag 30766256  T
Q  382 ccctatcataatctacagaaaa 403  Q
    | |||||||||||||| |||||    
T  30766255 ctctatcataatctaccgaaaa 30766234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 22244758 - 22244826
Alignment:
Q  19 ttaattcaggctctctgaaacacaatataatcctcaacaactttctttcctaccccagggaccaactca 87  Q
    ||||||||| ||| ||||| |||||||||||  | |||||||||| |||||||||||  ||||||||||    
T  22244758 ttaattcagactcactgaaccacaatataattataaacaactttcattcctaccccaaagaccaactca 22244826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 686 - 733
Target Start/End: Original strand, 10920234 - 10920281
Alignment:
Q  686 taataaagtccctagaatagttagtccgtttaatggaacattaagtat 733  Q
    ||||||| | ||||||||| |||||| |||||||||||||||||||||    
T  10920234 taataaaattcctagaataattagtctgtttaatggaacattaagtat 10920281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 744 - 855
Target Start/End: Complemental strand, 14984030 - 14983920
Alignment:
Q  744 tgagaccccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtagg 843  Q
    |||||||| |||||||   |||| | |||||| ||||||||  || ||||  ||||||| ||||||||||| |||| ||| |||| ||||||||||| ||    
T  14984030 tgagacccaattaaactataggacattattcttaaagtatctataatcaaaatttattgtgaagtgggataacatt-aagaatagggactattatgtggg 14983932  T
Q  844 tagactgatgat 855  Q
    |||||| |||||    
T  14983931 tagactaatgat 14983920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 23947554 - 23947621
Alignment:
Q  19 ttaattcaggctctctgaaacacaatataatcctcaacaactttctttcctaccccagggaccaactc 86  Q
    ||||||||| ||| ||||| |||||||||||  | |||||||||| |||||||||||  |||||||||    
T  23947554 ttaattcagactcactgaaccacaatataattataaacaactttcattcctaccccaaagaccaactc 23947621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 223
Target Start/End: Complemental strand, 21260457 - 21260405
Alignment:
Q  173 gaagtttggaagcaattggagtgaaga--aaaatgtctttttaaggtttctag 223  Q
    |||||||||||||||||||| ||||||  ||||||  ||||||||||||||||    
T  21260457 gaagtttggaagcaattggattgaagaagaaaatgaatttttaaggtttctag 21260405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 437 - 510
Target Start/End: Original strand, 39364532 - 39364605
Alignment:
Q  437 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcat 510  Q
    ||||| |||||||| || ||||||||||  ||||||||||| |||| |||||||||  |||  |||||||||||    
T  39364532 ccaaaactcacatagtctcttatttgcatgaacgtttagactccgaattttcaagcataaactccaattttcat 39364605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 210; Significance: 1e-114; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 210; E-Value: 1e-114
Query Start/End: Original strand, 44 - 511
Target Start/End: Complemental strand, 36225 - 35760
Alignment:
Q  44 tataatcctcaacaactttctttcctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtc 143  Q
    ||||||| | ||||||||   ||||||||||| ||||||||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||||      
T  36225 tataatcattaacaacttctattcctaccccaaggaccaactcatgaactcattagaccctttatacaaggttatttccttcctaaaaacatctctagat 36126  T
Q  144 ggttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacg 243  Q
    ||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||  |||||||||||||| || |||||  ||||| |||||    
T  36125 ggtcaggataaagtccctacacttaggaagaagtttggaagcatttggagtgaagaaaattgcatttttaaggtttctggtatgacatcatcgtggcacg 36026  T
Q  244 ttggtctcccatcgtggcacgatttttccagcatctctagacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgtt 343  Q
    |||||||||||||||||||| ||||||||||  |    ||||  | |||||||||||||| |||||||||||| |||||||| ||||| ||||| | |||    
T  36025 ttggtctcccatcgtggcacaatttttccagatttgacagacgacttcagattttcaacaatcacgttttcgcgcataaaaaccaaaccgttaacccgtt 35926  T
Q  344 ttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaa-attcaagtttcaaccacccnnnnnnnntcgattt-ccaaa 441  Q
    ||||| ||||||||| ||| || | ||||||| |||| | ||||||||||||||||||| |||||||||||||||| |         ||||||| |||||    
T  35925 ttcgatgccgttttcgcctacacgctcctgacacttatctctatcataatctacagaaatattcaagtttcaaccatc---taaatatcgatttcccaaa 35829  T
Q  442 cctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatc 511  Q
    |||||||| ||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||    
T  35828 cctcacattatctcttatttgc-aaaacgtttagacaccgacttttcaaacgaaaatcccaatttccatc 35760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 210; Significance: 1e-114; HSPs: 83)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 210; E-Value: 1e-114
Query Start/End: Original strand, 54 - 518
Target Start/End: Complemental strand, 18259848 - 18259386
Alignment:
Q  54 aacaactttctttcctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggata 153  Q
    |||||||||| ||| |||||||  || ||||||||||||||  |||||||||||||||| || ||||||||||| |||||||||||||  ||||||||||    
T  18259848 aacaactttcattcttaccccaaagatcaactcaagaactcgctagaccctttatacaaggtcatttctttccttaaaacatctctagatggttaggata 18259749  T
Q  154 aagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctccc 253  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||| ||  |||||||||||||| || |||||  ||||| |||||||||||||||    
T  18259748 aagtccctacacttaggaagaagtttggaaacaattggagtgaagaaaattgcatttttaaggtttcttgtttgacaacatcgtggcacgttggtctccc 18259649  T
Q  254 atcgtggcacgatttttccagcatctctagacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccg 353  Q
    |||||||||||||||||||||  |    |||   | ||||||||||||| ||||||||||||| ||||| |||||||| ||||| | |||||||| ||||    
T  18259648 atcgtggcacgatttttccagatttgacagatgacttcagattttcaaccttcacgttttcgcacataataatcaaaccgttaacccgttttcgatgccg 18259549  T
Q  354 ttttcacctgcatgttcctgactcttagccctatcataatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgatttcc-aaacctcacataa 451  Q
    ||||  |||  | | ||||||| |||||| |||||||||||||||| ||||||||||||||||||||||        ||||||||| |||||||||||||    
T  18259548 tttttgcctaaacgctcctgacacttagctctatcataatctacagaaaaattcaagtttcaaccaccc---aaaaatcgatttccaaaacctcacataa 18259452  T
Q  452 tcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    || ||||||||| |||||||| | ||||||||||||||||||||||||||||||||||| |||||||    
T  18259451 tcacttatttgc-aaaacgttcaaacaccgacttttcaagcgaaaatcccaattttcattaacccaa 18259386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 205; E-Value: 1e-111
Query Start/End: Original strand, 84 - 518
Target Start/End: Complemental strand, 8227376 - 8226943
Alignment:
Q  84 ctcaagaactcattagaccctttatacaaagttatttctttcctaaaaa-catctctagtcggttaggataaagtccctacacttatgaagaagtttgga 182  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||  ||||||||||||||||||||||||| |||||||||||||    
T  8227376 ctcaacaactcattagaccctttatacaaggttatttctttcctaaaaaacatctctagatggttaggataaagtccctacacttaggaagaagtttgga 8227277  T
Q  183 agcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgatttttccagcatctcta 282  Q
    |||| ||||||||||||||| ||  |||||| ||||||| |  ||||| |||||| ||||||||||||||||||||||||||||||||||||  ||   |    
T  8227276 agcatttggagtgaagaaaattgcatttttagggtttcttggatgacaaaatcgtggcacgttggtctcccatcgtggcacgatttttccagattcgaca 8227177  T
Q  283 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 382  Q
    |||  | ||||||||||||| |||||||||||||||||||||| ||||| ||||| | |||||||| ||||||||| |||  | | ||||||| ||||||    
T  8227176 gacgacttcagattttcaaccttcacgttttcgctcataaaaaccaaaccgttaacccgttttcgatgccgttttcgcctaaacgctcctgacacttagc 8227077  T
Q  383 cctatcataatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgatttcc-aaacctcacataatcccttatttgcaaaaacgtttagacacc 480  Q
    |||||||||||||| || ||||||||||||| ||||||||        ||| ||||| ||||||||||||||| ||||||||| ||||||||||||||||    
T  8227076 cctatcataatctatagaaaaattcaagtttaaaccaccc---aaaaatcggtttccaaaacctcacataatcacttatttgc-aaaacgtttagacacc 8226981  T
Q  481 gacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    || | ||||||||||||| ||| |||||||||||||||    
T  8226980 gaatcttcaagcgaaaattccagttttcatcaacccaa 8226943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 648 - 855
Target Start/End: Original strand, 29308890 - 29309097
Alignment:
Q  648 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgag 747  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||    
T  29308890 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 29308989  T
Q  748 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 847  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29308990 agcccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 29309089  T
Q  848 ctgatgat 855  Q
    ||||||||    
T  29309090 ctgatgat 29309097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 648 - 855
Target Start/End: Original strand, 29315850 - 29316057
Alignment:
Q  648 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgag 747  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||    
T  29315850 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 29315949  T
Q  748 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 847  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29315950 agcccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 29316049  T
Q  848 ctgatgat 855  Q
    ||||||||    
T  29316050 ctgatgat 29316057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 190; E-Value: 1e-102
Query Start/End: Original strand, 650 - 855
Target Start/End: Complemental strand, 16566525 - 16566320
Alignment:
Q  650 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgagac 749  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  16566525 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 16566426  T
Q  750 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 849  Q
    ||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16566425 cccgttaaacataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 16566326  T
Q  850 gatgat 855  Q
    ||||||    
T  16566325 gatgat 16566320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 648 - 855
Target Start/End: Complemental strand, 27381459 - 27381252
Alignment:
Q  648 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgag 747  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  27381459 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 27381360  T
Q  748 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 847  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  27381359 accccattaaacatatggaaactattctcaaagtatccatagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 27381260  T
Q  848 ctgatgat 855  Q
    ||||||||    
T  27381259 ctgatgat 27381252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 648 - 855
Target Start/End: Complemental strand, 27471842 - 27471635
Alignment:
Q  648 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgag 747  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  27471842 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 27471743  T
Q  748 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 847  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  27471742 accccattaaacatatggaaactattctcaaagtatccatagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 27471643  T
Q  848 ctgatgat 855  Q
    ||||||||    
T  27471642 ctgatgat 27471635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 650 - 855
Target Start/End: Complemental strand, 17684674 - 17684469
Alignment:
Q  650 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgagac 749  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  17684674 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 17684575  T
Q  750 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 849  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  17684574 cccgttaaacataaggaaactattctcaaagtatccgtagtcaagctttgatgagaagtgggatatcattaaagcatagagactattatgtaggtagact 17684475  T
Q  850 gatgat 855  Q
    ||||||    
T  17684474 gatgat 17684469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 184; E-Value: 4e-99
Query Start/End: Original strand, 648 - 855
Target Start/End: Complemental strand, 17691647 - 17691440
Alignment:
Q  648 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgag 747  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  17691647 acaaggcatttctttattgattttgttttctttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 17691548  T
Q  748 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 847  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  17691547 accccattaaacataaggaaactattcttaaagtatccgtagtcaagctttagtgagaagtgggatatcattaaagcataaagactattatgtaggtaga 17691448  T
Q  848 ctgatgat 855  Q
    ||||||||    
T  17691447 ctgatgat 17691440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 182; E-Value: 6e-98
Query Start/End: Original strand, 650 - 855
Target Start/End: Complemental strand, 25537364 - 25537159
Alignment:
Q  650 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgagac 749  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||    
T  25537364 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaataattagtccgtttaatggaacattaagtataactttattgtgagac 25537265  T
Q  750 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 849  Q
    ||| |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  25537264 cccgttaaacataaggaaactattcttaaagtattcgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtaggtagact 25537165  T
Q  850 gatgat 855  Q
    ||||||    
T  25537164 gatgat 25537159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 174; E-Value: 4e-93
Query Start/End: Original strand, 650 - 855
Target Start/End: Complemental strand, 189182 - 188977
Alignment:
Q  650 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgagac 749  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  189182 aaggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 189083  T
Q  750 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 849  Q
    |||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  189082 cccattaaacataaggaaactattcttaaagtatttgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtgggtagact 188983  T
Q  850 gatgat 855  Q
    ||||||    
T  188982 gatgat 188977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 170; E-Value: 9e-91
Query Start/End: Original strand, 650 - 855
Target Start/End: Original strand, 11651725 - 11651930
Alignment:
Q  650 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgagac 749  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  11651725 aaggcatttctttattgattttgatttgtttcaaaataataaagtccctaaaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 11651824  T
Q  750 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 849  Q
    ||||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  11651825 cccattaaaaataaggaaactattctaaaagtatcagtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtgggtagact 11651924  T
Q  850 gatgat 855  Q
    ||||||    
T  11651925 gatgat 11651930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 288 - 518
Target Start/End: Complemental strand, 13750715 - 13750488
Alignment:
Q  288 catcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctat 387  Q
    ||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||| ||| ||||||||| |||| ||||||| |||||||||||    
T  13750715 catcagattttcaaccttcacgttttcgcgcataaaaatcaaactgttaatctgttttcgatgcc-ttttcacctacatgctcctgacacttagccctat 13750617  T
Q  388 cataatctacagaaa-attcaagtttcaaccacccnnnnnnnntcgatttccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttt 486  Q
    ||||||||||||||| |||||||||||||||||||        |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  13750616 cataatctacagaaagattcaagtttcaaccaccc---aaaaatcgatttccaaacctcacataatctcttatttgcaaaaacgtttagacaccgacttt 13750520  T
Q  487 tcaagcgaaaatcccaattttcatcaacccaa 518  Q
    ||||| |||||||||||||| |||| ||||||    
T  13750519 tcaagtgaaaatcccaatttccatcgacccaa 13750488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 125; E-Value: 6e-64
Query Start/End: Original strand, 54 - 274
Target Start/End: Complemental strand, 13751015 - 13750795
Alignment:
Q  54 aacaactttctttcctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggata 153  Q
    |||||||| | ||||||||||   |||||||||| ||||||||||||||||||| |||| |||||||| |||||||||||||||||||   |||||||||    
T  13751015 aacaacttccattcctacccctaagaccaactcatgaactcattagaccctttagacaaggttatttccttcctaaaaacatctctagattgttaggata 13750916  T
Q  154 aagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctccc 253  Q
    ||||||||||||||| |||||||| |||||||| ||||||||||||||| ||  |||||||||||||| |  |||||| ||||| ||| |||||||||||    
T  13750915 aagtccctacacttaggaagaagtctggaagcatttggagtgaagaaaattgcatttttaaggtttcttggatgacagcatcgtggcatgttggtctccc 13750816  T
Q  254 atcgtggcacgatttttccag 274  Q
    |||||||||||||||||||||    
T  13750815 atcgtggcacgatttttccag 13750795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 208 - 518
Target Start/End: Complemental strand, 23532407 - 23532099
Alignment:
Q  208 tttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgatttttccagcatctctagacatcatcagattttcaacattca 307  Q
    |||||| ||||||| |  ||||| |||||| ||||||||||||||||||||||||||||||||||||  ||   ||||  | ||||||||||||| ||||    
T  23532407 tttttagggtttcttggatgacaaaatcgtggcacgttggtctcccatcgtggcacgatttttccagattcgacagacgacttcagattttcaaccttca 23532308  T
Q  308 cgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacag-aaaattc 406  Q
    |||||||||||||||||| ||||| ||||| | |||||||| ||||||||| |||  | |  |||||| |||||||||||||||||||| || |||| ||    
T  23532307 cgttttcgctcataaaaaccaaaccgttaacccgttttcgatgccgttttcgcctaaacgcacctgacacttagccctatcataatctatagaaaaaatc 23532208  T
Q  407 aagtttcaaccacccnnnnnnnntcgatttcc-aaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaatt 505  Q
    |||||| ||||||||        ||| ||||| |||| |||||||||| ||||||||| |||||||||||||||||| | |||||| |||||||||| ||    
T  23532207 aagtttaaaccaccc---aaaaatcggtttccaaaacttcacataatcacttatttgc-aaaacgtttagacaccgaatcttcaagtgaaaatcccagtt 23532112  T
Q  506 ttcatcaacccaa 518  Q
    | |||||||||||    
T  23532111 tccatcaacccaa 23532099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 54 - 221
Target Start/End: Original strand, 24267156 - 24267323
Alignment:
Q  54 aacaactttctttcctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggata 153  Q
    |||||||| | ||||||||||| ||||||||||| ||||||||||||||||||||| || |||||||||||| |||||||||||||||  ||||||||||    
T  24267156 aacaacttccattcctaccccaaggaccaactcatgaactcattagaccctttataaaacgttatttctttcttaaaaacatctctagatggttaggata 24267255  T
Q  154 aagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggtttct 221  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||| || ||||| || ||||||    
T  24267256 aagtccctacacttaggaagaagtttggaagcatttggagtgaagaaaattgccttttaaaagtttct 24267323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 79 - 205
Target Start/End: Complemental strand, 5110407 - 5110281
Alignment:
Q  79 accaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtt 178  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||||| |||||||||    
T  5110407 accaactcaataactcattagaccctttatacaaggttatttctttcctaaaaacatctctagatggttaggataaagtccctacacttaggaagaagtt 5110308  T
Q  179 tggaagcaattggagtgaagaaaaatg 205  Q
    |||||||||||||||||||||||||||    
T  5110307 tggaagcaattggagtgaagaaaaatg 5110281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 650 - 855
Target Start/End: Complemental strand, 13359474 - 13359269
Alignment:
Q  650 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgagac 749  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| || |||||||| ||||||||||||||| ||  ||| ||    
T  13359474 aaggcatttatttatttattttgttttgtttcaaaataataaagtccctagaatagttagttcgcttaatggagcattaagtataacttaatcgtgaaac 13359375  T
Q  750 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 849  Q
     |||||||||||||  | | |||| | ||||||||||||||||| |||||||| ||| ||||| | ||||||||| ||||||||||||| | | ||||||    
T  13359374 tccattaaacataaaaacattatttttaaagtatccgtagtcaacctttattgtgaaatgggacaacattaaagcgtagagactattatatggatagact 13359275  T
Q  850 gatgat 855  Q
    ||||||    
T  13359274 gatgat 13359269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 83 - 274
Target Start/End: Original strand, 24562783 - 24562973
Alignment:
Q  83 actcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttgga 182  Q
    ||||| ||||||||||||||||| |||| | ||||| |||||||||||||||||||||   | ||||||||||||||||||||||| |||||||||||||    
T  24562783 actcatgaactcattagaccctt-atactacgttatatctttcctaaaaacatctctatatgtttaggataaagtccctacacttaggaagaagtttgga 24562881  T
Q  183 agcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgatttttccag 274  Q
    |||| ||||||||||||||| ||  |||||| ||||| | |  |||||| ||||| |||||||||| |||||||||||||||||||||||||    
T  24562882 agcatttggagtgaagaaaattgcatttttagggtttattggatgacagcatcgtggcacgttggtatcccatcgtggcacgatttttccag 24562973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 79 - 205
Target Start/End: Complemental strand, 5289766 - 5289640
Alignment:
Q  79 accaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtt 178  Q
    |||||| ||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||   |||| ||||||||||||||||||| |||||||||    
T  5289766 accaacccaataactccttagaccctttatacaaggttatttctttcctaaaaacatctctagatagttaagataaagtccctacacttaggaagaagtt 5289667  T
Q  179 tggaagcaattggagtgaagaaaaatg 205  Q
    |||||||||||||||||||||||||||    
T  5289666 tggaagcaattggagtgaagaaaaatg 5289640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 81 - 274
Target Start/End: Original strand, 25650399 - 25650592
Alignment:
Q  81 caactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttg 180  Q
    |||| |||||||||  || ||||||| |||||||||||||||||| ||||| || | ||||  ||||| |||||||||||||||||||  || |||||||    
T  25650399 caacacaagaactcgataaaccctttgtacaaagttatttctttcataaaagcacccctagatggttaagataaagtccctacacttagaaataagtttg 25650498  T
Q  181 gaagcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgatttttccag 274  Q
    ||| ||||||||  |||||||| ||  |||||||| ||||| || |||||| ||||| |||| |||||||||||||||||||||||||||||||    
T  25650499 gaaacaattggatcgaagaaaattgcatttttaagatttcttgtctgacagcatcgtggcacattggtctcccatcgtggcacgatttttccag 25650592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 68 - 205
Target Start/End: Complemental strand, 29416262 - 29416125
Alignment:
Q  68 ctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacactt 167  Q
    ||||||||  |||||||||| ||||||||||| |||| ||||||| |||||||||| |||||||| ||||||||  ||||| ||||||||||||||||||    
T  29416262 ctaccccaaagaccaactcatgaactcattagcccctatatacaaggttatttcttacctaaaaatatctctagatggttaagataaagtccctacactt 29416163  T
Q  168 atgaagaagtttggaagcaattggagtgaagaaaaatg 205  Q
    | |||||||||||||||||||||||| |||||||||||    
T  29416162 aggaagaagtttggaagcaattggagcgaagaaaaatg 29416125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 65 - 224
Target Start/End: Complemental strand, 16448458 - 16448301
Alignment:
Q  65 ttcctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctaca 164  Q
    |||||||||||  |||||||||| |||||||||||||||||||||||| ||||| || |||||||||||||||||||  |||||||||||||| ||||||    
T  16448458 ttcctaccccaaagaccaactcatgaactcattagaccctttatacaaggttatctccttcctaaaaacatctctagatggttaggataaagttcctaca 16448359  T
Q  165 cttatgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggtttctagt 224  Q
    |||| ||||||   ||||| || ||||||||||||||| ||  |||||||||||||||||    
T  16448358 cttaagaagaa--atggaaacatttggagtgaagaaaattgcatttttaaggtttctagt 16448301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 326 - 518
Target Start/End: Original strand, 28948221 - 28948412
Alignment:
Q  326 tcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattcaagtttcaaccacccnnnn 425  Q
    |||||| ||||||| | ||| || ||||||||| |||  ||| ||||||| ||| || ||||||||||||||||||| ||||||||||||||| ||        
T  28948221 tcaaaccgttaatcggattttgatgccgttttcgcctatatgctcctgacacttggctctatcataatctacagaaatttcaagtttcaaccatcccaag 28948320  T
Q  426 nnnntcgatttccaaa-cctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
        ||  |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  28948321 aa--tcattttccaaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcaaaaattccaattttcatcaacccaa 28948412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 288 - 505
Target Start/End: Original strand, 24267455 - 24267671
Alignment:
Q  288 catcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagcccta 386  Q
    |||||||||||| ||  ||||||||||||| | |||||  ||||| ||||| | |||||||| ||||||||| ||| || | ||||||| |||||| |||    
T  24267455 catcagattttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgccgttttcgcctacacgctcctgacacttagctcta 24267554  T
Q  387 tcataatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgattt-ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgact 484  Q
    ||||||||||||| ||||||||||||||||||| ||        ||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  24267555 tcataatctacagaaaaattcaagtttcaaccagcc---aaacatcgatttcccaaacctcacataatctcttatttgc-aaaacgtttagacaccgact 24267650  T
Q  485 tttcaagcgaaaatcccaatt 505  Q
    |||||| ||||||||||||||    
T  24267651 tttcaaacgaaaatcccaatt 24267671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 282 - 518
Target Start/End: Complemental strand, 5110159 - 5109924
Alignment:
Q  282 agacatcatcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactctta 380  Q
    ||||| |||||||||||| ||  ||||||||||||| | |||||  ||||| ||||| | |||||||| ||||||||| ||| || | ||||||| ||||    
T  5110159 agacaacatcagattttctaatcttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgccgttttcgcctacacgctcctgacactta 5110060  T
Q  381 gccctatcataatctacagaaaat-tcaagtttcaaccacccnnnnnnnntcgatttcc-aaacctcacataatcccttatttgcaaaaacgtttagaca 478  Q
    || ||||||||||||||||||||  |||||||||||||| ||        ||||||||| ||||||||||||||  ||||||||||||| ||||||||||    
T  5110059 gctctatcataatctacagaaaaactcaagtttcaaccaaccaaaaa---tcgatttcccaaacctcacataatatcttatttgcaaaa-cgtttagaca 5109964  T
Q  479 ccgacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    |||| ||||||| ||||||||||||||| |||||||||||    
T  5109963 ccgatttttcaaacgaaaatcccaatttccatcaacccaa 5109924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 283 - 518
Target Start/End: Complemental strand, 16448220 - 16447986
Alignment:
Q  283 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 382  Q
    |||| ||||||||||||| | ||||||||||||| | |||||||||||| ||||| | |||||||| ||||||||||||| |  | ||||||| | ||||    
T  16448220 gacagcatcagattttcacccttcacgttttcgcgcctaaaaatcaaaccgttaaccagttttcgatgccgttttcacctacgcgctcctgacacatagc 16448121  T
Q  383 cctatcataatctacagaaaattca-agtttcaaccacccnnnnnnnntcgatttccaaa-cctcacataatcccttatttgcaaaaacgtttagacacc 480  Q
     |||||| || ||| |||||| | | ||||||||||||||        |||||||||||| |||||||||||| || |||||||||||| ||||||||||    
T  16448120 tctatcacaaactaaagaaaaattacagtttcaaccacccaaaaa---tcgatttccaaaacctcacataatcactcatttgcaaaaacatttagacacc 16448024  T
Q  481 gacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    |||| ||||||||||||||| |||| ||||||| ||||    
T  16448023 gactcttcaagcgaaaatccaaattatcatcaaaccaa 16447986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 324 - 511
Target Start/End: Original strand, 24441306 - 24441491
Alignment:
Q  324 aatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaa-attcaagtttcaaccacccn 422  Q
    |||||||| ||||| | |||||||| ||||||||  ||| || | ||||||| |||||||||||||||||||||| ||| |||||||||||||||||||     
T  24441306 aatcaaaccgttaacccgttttcgatgccgtttttgcctacacgctcctgacacttagccctatcataatctacaaaaatattcaagtttcaaccaccca 24441405  T
Q  423 nnnnnnntcgatttcc-aaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatc 511  Q
           ||||||||| ||||| ||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||    
T  24441406 aaaa---tcgatttcccaaaccccacataatctcttatttgcaaaa-cgtttagacaccgacttttcaaacgaaaatcccaatttccatc 24441491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 288 - 518
Target Start/End: Complemental strand, 29415997 - 29415766
Alignment:
Q  288 catcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagcccta 386  Q
    |||||||||||| ||  ||||||||||||| |||||||  ||||| ||||| |  ||||||| | ||||||| ||| || | ||||||| |||||| |||    
T  29415997 catcagattttctaattttcacgttttcgcgcataaaatccaaaccgttaacccattttcgatgtcgttttcgcctacacgctcctgacacttagctcta 29415898  T
Q  387 tcataatctacagaaaa---ttcaagtttcaaccacccnnnnnnnntcgatttcc-aaacctcacataatcccttatttgcaaaaacgtttagacaccga 482  Q
    |||||||||||||||||   ||||||||||||||||||        | ||||||| ||||||||||||||| ||||||||||||| ||||||||||||||    
T  29415897 tcataatctacagaaaaagattcaagtttcaaccacccaaaaa---ttgatttcccaaacctcacataatctcttatttgcaaaa-cgtttagacaccga 29415802  T
Q  483 cttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
     ||||||| |||||||| |||||| |||||||||||    
T  29415801 tttttcaaacgaaaatcgcaatttccatcaacccaa 29415766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 288 - 421
Target Start/End: Original strand, 25650672 - 25650806
Alignment:
Q  288 catcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctat 387  Q
    ||||||||||||| | ||||||||||||| |||||||||||||| ||||||||  |||||| ||||||||||||| |||||||||||| ||||||| |||    
T  25650672 catcagattttcatccttcacgttttcgcgcataaaaatcaaactgttaatctaatttcgatgccgttttcacctacatgttcctgacacttagccttat 25650771  T
Q  388 cataatctacag-aaaattcaagtttcaaccaccc 421  Q
    | |||| ||||| ||||||||||||||||| ||||    
T  25650772 cttaatgtacagaaaaattcaagtttcaacaaccc 25650806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 101 - 274
Target Start/End: Complemental strand, 13621704 - 13621531
Alignment:
Q  101 ccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaa 200  Q
    ||||| |||| ||| |||||||| | |||||||||| ||||  | ||||||||||||||||||||||| ||||| |||||||| ||||||||| ||||||    
T  13621704 cccttaatacgaagctatttcttccataaaaacatccctagatgattaggataaagtccctacacttaggaagatgtttggaaccaattggagcgaagaa 13621605  T
Q  201 aaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgatttttccag 274  Q
    || ||  ||||| |||||| | ||   |||| ||||| |||||||||| |||||||||||||||||||||||||    
T  13621604 aattgcatttttgaggtttttggtcaaacagcatcgtggcacgttggtttcccatcgtggcacgatttttccag 13621531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 101 - 278
Target Start/End: Complemental strand, 15735802 - 15735625
Alignment:
Q  101 ccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaa 200  Q
    ||||| |||||||| |||| ||| | |||||||||| ||||  | || |||||||||||||||||||| |||||||||||||| ||||||||| ||||||    
T  15735802 cccttaatacaaagctattccttccataaaaacatccctagatgattcggataaagtccctacacttaggaagaagtttggaaccaattggagcgaagaa 15735703  T
Q  201 aaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgatttttccagcatc 278  Q
    || ||  ||||| |||||| | ||   |||  ||||| |||||||||| |||||||||||||||||||||||||||||    
T  15735702 aattgcatttttgaggtttttggtcaaacaacatcgtggcacgttggtttcccatcgtggcacgatttttccagcatc 15735625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 101 - 274
Target Start/End: Complemental strand, 18003564 - 18003391
Alignment:
Q  101 ccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaa 200  Q
    ||||| |||||||| |||||||| | |||||||||| ||||  | ||||||||||||||||||||||| |||||||||||||| ||||||||| ||| ||    
T  18003564 cccttaatacaaagctatttcttccataaaaacatccctagatgattaggataaagtccctacacttaggaagaagtttggaaccaattggagcgaaaaa 18003465  T
Q  201 aaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgatttttccag 274  Q
    || ||  ||||| |||||| | ||   |||| ||||| |||||||||| ||||| |||||||||||||||||||    
T  18003464 aattgcatttttgaggtttttggtcaaacagcatcgtggcacgttggtttcccaccgtggcacgatttttccag 18003391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 369 - 501
Target Start/End: Complemental strand, 31468137 - 31468006
Alignment:
Q  369 tcctgactcttagccctatcataatctacagaaaa-ttcaagtttcaaccacccnnnnnnnntcgatttcca-aacctcacataatcccttatttgcaaa 466  Q
    ||||||| |||| | |||||||||||||||||||| ||||||||||||||||||        |||||||||| |||||||||||||| ||||||||||||    
T  31468137 tcctgacacttaactctatcataatctacagaaaaattcaagtttcaaccacccaaaaa---tcgatttccagaacctcacataatcacttatttgcaaa 31468041  T
Q  467 aacgtttagacaccgacttttcaagcgaaaatccc 501  Q
    |||||||||||||||||||||||||||||||||||    
T  31468040 aacgtttagacaccgacttttcaagcgaaaatccc 31468006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 304 - 416
Target Start/End: Original strand, 18776609 - 18776722
Alignment:
Q  304 ttcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacag-aaa 402  Q
    ||||||||||| | |||||||||||||| |||||||||||||||| ||||||||||||| | ||||| |||| |||||||||||| |||| ||||| |||    
T  18776609 ttcacgttttcacgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacgtgttcatgacacttagccctatcttaatgtacagaaaa 18776708  T
Q  403 attcaagtttcaac 416  Q
    ||||||||||||||    
T  18776709 attcaagtttcaac 18776722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 109 - 274
Target Start/End: Original strand, 23994115 - 23994280
Alignment:
Q  109 acaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatgtct 208  Q
    |||| |||| ||||||| |||||||| | ||||  | || |||||||||||||||||||| ||| |||||||||| ||||||||| |||||||| ||  |    
T  23994115 acaaggttaattctttcataaaaacacccctagatgatttggataaagtccctacacttaggaaaaagtttggaaccaattggagcgaagaaaattgcat 23994214  T
Q  209 ttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgatttttccag 274  Q
    ||||||||||| | ||   |||| ||||| |||| ||||| |||||||||||||||||||||||||    
T  23994215 ttttaaggtttttggtcaaacagcatcgtggcacattggtttcccatcgtggcacgatttttccag 23994280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 282 - 508
Target Start/End: Complemental strand, 5289518 - 5289298
Alignment:
Q  282 agacatcatcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactctta 380  Q
    ||||| |||||||||||| ||  ||||||||||||| | |||||  ||||| ||||| | |||||||| ||||||||| ||| |    ||||||| ||||    
T  5289518 agacaacatcagattttctaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgccgttttcgcctacgcactcctgacactta 5289419  T
Q  381 gccctatcataatctacagaaaattcaagtttcaaccacccnnnnnnnntcgatttcca-aacctcacataatcccttatttgcaaaaacgtttagacac 479  Q
    || ||||||||||||||||  ||||||||||||||||||||        |||||||||| |||||| |||| ||   | |||||||||||||||||||||    
T  5289418 gctctatcataatctacag--aattcaagtttcaaccaccc---aaaactcgatttccagaacctcgcatactc---tgtttgcaaaaacgtttagacac 5289327  T
Q  480 cgacttttcaagcgaaaatcccaattttc 508  Q
    ||| ||||||||||||||||| |||||||    
T  5289326 cgagttttcaagcgaaaatccaaattttc 5289298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 101 - 223
Target Start/End: Original strand, 16231153 - 16231275
Alignment:
Q  101 ccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaa 200  Q
    ||||| |||||||| |||||||||| |||||||||| ||||  | ||||||||||||||||||||||| ||||||||||||||| |||||||   |||||    
T  16231153 cccttaatacaaagctatttctttcataaaaacatccctagatgattaggataaagtccctacacttaggaagaagtttggaagtaattggatcaaagaa 16231252  T
Q  201 aaatgtctttttaaggtttctag 223  Q
    || ||  ||||||||||||||||    
T  16231253 aattgcatttttaaggtttctag 16231275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 81 - 189
Target Start/End: Complemental strand, 31468447 - 31468339
Alignment:
Q  81 caactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttg 180  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||  ||||||| ||||||  | |||||||||||||||||||||||  || |||||||    
T  31468447 caacacaataactcattagaccctttatacaaagttatttctttcacaaaaacacctctagatgattaggataaagtccctacacttagaaataagtttg 31468348  T
Q  181 gaagcaatt 189  Q
    ||| |||||    
T  31468347 gaaacaatt 31468339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 439 - 556
Target Start/End: Original strand, 25753198 - 25753305
Alignment:
Q  439 aaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaatgtaacccaaccccaaaact 538  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||| ||| ||||||          ||| |||||||||||||    
T  25753198 aaacctcacataatcccttatttgcaaaaacgtttagacaccaacttttcgaacgaaaatcctaatcttcatc----------aactcaaccccaaaact 25753287  T
Q  539 ggttctaatcattgtact 556  Q
    ||||||||||||||||||    
T  25753288 ggttctaatcattgtact 25753305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 439 - 556
Target Start/End: Original strand, 25755368 - 25755475
Alignment:
Q  439 aaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaatgtaacccaaccccaaaact 538  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||| ||| ||||||          ||| |||||||||||||    
T  25755368 aaacctcacataatcccttatttgcaaaaacgtttagacaccaacttttcgaacgaaaatcctaatcttcatc----------aactcaaccccaaaact 25755457  T
Q  539 ggttctaatcattgtact 556  Q
    ||||||||||||||||||    
T  25755458 ggttctaatcattgtact 25755475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 282 - 403
Target Start/End: Complemental strand, 18003317 - 18003196
Alignment:
Q  282 agacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 381  Q
    ||||| ||||||||||||||| |  |||||||||| |||||||||||||| ||||||  |||||||| ||||||||||||| |||| |||| || |||||    
T  18003317 agacagcatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaattcgttttcgatgccgttttcacctacatgctccttacacttag 18003218  T
Q  382 ccctatcataatctacagaaaa 403  Q
    | ||||||||||  ||||||||    
T  18003217 cactatcataatgcacagaaaa 18003196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 282 - 403
Target Start/End: Original strand, 23994354 - 23994475
Alignment:
Q  282 agacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 381  Q
    ||||| ||||||||||||||| |  |||||||||| |||||||||||||| ||||||| |||||||| ||||||||| ||| |||| |||| || |||||    
T  23994354 agacaacatcagattttcaacttctacgttttcgcgcataaaaatcaaactgttaatccgttttcgatgccgttttcgcctacatgctcctaacacttag 23994453  T
Q  382 ccctatcataatctacagaaaa 403  Q
    | ||||||||||  ||||||||    
T  23994454 cactatcataatgcacagaaaa 23994475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 437 - 513
Target Start/End: Original strand, 20177753 - 20177829
Alignment:
Q  437 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaa 513  Q
    |||||||||||||||||||||||||||||||||||| | || | |||||||||||||||||||||||||| ||||||    
T  20177753 ccaaacctcacataatcccttatttgcaaaaacgttcaaactctgacttttcaagcgaaaatcccaatttccatcaa 20177829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 687 - 855
Target Start/End: Complemental strand, 20553755 - 20553587
Alignment:
Q  687 aataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgagaccccattaaacataaggaaactattctcaaagtatccg 786  Q
    ||||||||| |||| |||| |||||||||||||| || ||||||||  |||| ||  ||||| ||||||||| ||||| | | |||||| |||| |||||    
T  20553755 aataaagtctctaggatagctagtccgtttaatgaaatattaagtacgacttaatcgtgagatcccattaaatataagaatattattcttaaagcatccg 20553656  T
Q  787 tagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 855  Q
    |||| ||  ||||||| |||||| ||||  ||||||||||| ||| | |||||| ||||||||||||||    
T  20553655 tagtgaatttttattgtgaagtgagataaaattaaagcataaagatttttatgttggtagactgatgat 20553587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 437 - 513
Target Start/End: Complemental strand, 22158238 - 22158162
Alignment:
Q  437 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaa 513  Q
    |||||||||||||||||||||||||||||||||||| | || | |||||||||||||||||||||||||| ||||||    
T  22158238 ccaaacctcacataatcccttatttgcaaaaacgttcaaactctgacttttcaagcgaaaatcccaatttccatcaa 22158162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 307 - 418
Target Start/End: Original strand, 16231509 - 16231620
Alignment:
Q  307 acgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattc 406  Q
    |||||||||| |||||||||||||| ||||||| |||||||| ||||||||| ||| |||| |||| || ||| || ||||||||||||||| ||| |||    
T  16231509 acgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcgcctacatgctcctaacacttggcactatcataatctacaaaaatttc 16231608  T
Q  407 aagtttcaacca 418  Q
    | ||||||||||    
T  16231609 atgtttcaacca 16231620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 551 - 612
Target Start/End: Complemental strand, 17691744 - 17691683
Alignment:
Q  551 tgtactgtttgaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17691744 tgtacttttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 17691683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 307 - 418
Target Start/End: Complemental strand, 18087461 - 18087350
Alignment:
Q  307 acgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattc 406  Q
    |||||||||| |||||||||||||| ||||||| |||||||| || |||||| ||| |||| |||| || ||| || ||||||||||||||| ||| |||    
T  18087461 acgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgcagttttcgcctacatgctcctaacacttggcactatcataatctacaaaaatttc 18087362  T
Q  407 aagtttcaacca 418  Q
    | ||||||||||    
T  18087361 atgtttcaacca 18087350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 667 - 840
Target Start/End: Original strand, 8509941 - 8510115
Alignment:
Q  667 attttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgaga-ccccattaaacataagg 765  Q
    ||||| |||||||| ||||||||||||||  ||||||| ||||||  ||| ||||||||||| |||  |||| ||||||||| |||||||||| || |||    
T  8509941 attttattttgttttaaaataataaagtctatagaataattagtctatttgatggaacattatgtacgacttaattatgagacccccattaaatatgagg 8510040  T
Q  766 aaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgt 840  Q
    |   |||| | |||||||  ||||| ||||||||||  ||| || |||| ||||||| |||| ||||||||||||    
T  8510041 atgatattattaaagtatatgtagttaagctttattatgaaatgagatagcattaaaacataaagactattatgt 8510115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 281 - 403
Target Start/End: Complemental strand, 13621458 - 13621336
Alignment:
Q  281 tagacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactctta 380  Q
    |||||| ||||||||||||||| |  || |||| || |||||||||||||| ||||||| |||||||| ||||||||||||| |||| |||| ||  |||    
T  13621458 tagacagcatcagattttcaacttctacatttttgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcacctacatgctcctaacaatta 13621359  T
Q  381 gccctatcataatctacagaaaa 403  Q
    || ||||||||||  ||||||||    
T  13621358 gcactatcataatgcacagaaaa 13621336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 439 - 513
Target Start/End: Complemental strand, 19102773 - 19102699
Alignment:
Q  439 aaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaa 513  Q
    ||||||||||||||| || |||||||||||| |||||||||  ||| ||||||||||||||||||||||||||||    
T  19102773 aaacctcacataatcactcatttgcaaaaacatttagacacttactcttcaagcgaaaatcccaattttcatcaa 19102699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 101 - 219
Target Start/End: Original strand, 23977031 - 23977149
Alignment:
Q  101 ccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaa 200  Q
    ||||| |||||||| |||||||| | |||||||||| ||||    ||||||||||||||||||||||| ||||||||||||||| |||||||   |||||    
T  23977031 cccttaatacaaagctatttcttccataaaaacatccctagataattaggataaagtccctacacttaggaagaagtttggaagtaattggatcaaagaa 23977130  T
Q  201 aaatgtctttttaaggttt 219  Q
    || ||  ||||||||||||    
T  23977131 aattgcatttttaaggttt 23977149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 556 - 612
Target Start/End: Complemental strand, 27381551 - 27381495
Alignment:
Q  556 tgtttgaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  27381551 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtttcatg 27381495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 556 - 612
Target Start/End: Complemental strand, 27471934 - 27471878
Alignment:
Q  556 tgtttgaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  27471934 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtttcatg 27471878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 556 - 612
Target Start/End: Original strand, 29308798 - 29308854
Alignment:
Q  556 tgtttgaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  29308798 tgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 29308854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 556 - 612
Target Start/End: Original strand, 29315758 - 29315814
Alignment:
Q  556 tgtttgaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  29315758 tgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 29315814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 307 - 418
Target Start/End: Original strand, 23977386 - 23977497
Alignment:
Q  307 acgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattc 406  Q
    |||||||||| |||||||||||||| ||||||| |||||||| ||||||| | ||| |||| |||| || ||| || |||||||||| |||| ||| |||    
T  23977386 acgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgtttccgcctacatgctcctaacacttggcactatcataatttacaaaaatttc 23977485  T
Q  407 aagtttcaacca 418  Q
    | ||||||||||    
T  23977486 atgtttcaacca 23977497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 104 - 274
Target Start/End: Original strand, 18776343 - 18776513
Alignment:
Q  104 tttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaa 203  Q
    |||| |||| |||| ||||||  |||||||| | ||||  | ||||||||||||||||| | |||  || |||||||||| ||||||||   |||||||     
T  18776343 tttacacaaggttaattctttaataaaaacacccctagatgattaggataaagtccctatatttagaaataagtttggaaacaattggatcaaagaaaat 18776442  T
Q  204 tgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgatttttccag 274  Q
    ||  ||||||||||||  ||   ||||| ||||| |||||||||| ||||||||||||||| |||||||||    
T  18776443 tgcatttttaaggttttcagaaagacagcatcgtggcacgttggtttcccatcgtggcacggtttttccag 18776513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 58 - 132
Target Start/End: Complemental strand, 22212164 - 22212090
Alignment:
Q  58 actttctttcctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaa 132  Q
    |||||| |||||||||||  |||||| ||||| ||||||||||||| |||||||| |||||||||||||||||||    
T  22212164 actttcattcctaccccaaagaccaattcaagtactcattagaccccttatacaaggttatttctttcctaaaaa 22212090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 437 - 518
Target Start/End: Complemental strand, 16132716 - 16132635
Alignment:
Q  437 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    ||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||  |||| |||| || |||| ||||||    
T  16132716 ccaaacctcacataatctcttgtttgcaaaaacgtttagactccgacttttcaagcttaaattccaacttccatcgacccaa 16132635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 556 - 612
Target Start/End: Complemental strand, 17684768 - 17684712
Alignment:
Q  556 tgtttgaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    |||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  17684768 tgttggaataagccctaatagccaatctatgttgaatgggtttggctttgtatcatg 17684712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 671 - 855
Target Start/End: Original strand, 27925772 - 27925961
Alignment:
Q  671 tgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacat---taagtata--actttattatgagaccccattaaacataagg 765  Q
    |||||||||||||||||||||||||| |||||||  ||||  |||||| |||||||   ||||| |   |||| ||  |||||| |||||||||  |||     
T  27925772 tgttttgtttcaaaataataaagtccttagaataactagtatgtttaacggaacataattaagtgtgtgacttaatcgtgagactccattaaactaaaga 27925871  T
Q  766 aaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 855  Q
    ||| |||||| ||||||||  ||||||| |||||||  ||||||| ||| |||| ||||| | |||||||||||| | || |||||||||    
T  27925872 aaattattcttaaagtatctctagtcaaactttatttggaagtggtatagcattgaagcacaaagactattatgtggataaactgatgat 27925961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 555 - 610
Target Start/End: Original strand, 11651629 - 11651684
Alignment:
Q  555 ctgtttgaataagccctaatagccaatctatattgattgggtttggctttgtatca 610  Q
    ||||| || |||||||||||||||||||||||||||||| ||||||||||||||||    
T  11651629 ctgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatca 11651684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 439 - 518
Target Start/End: Original strand, 18659196 - 18659275
Alignment:
Q  439 aaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    ||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||  ||||  ||| || |||||||||||    
T  18659196 aaacctcacataatctcttgtttgcaaaaacgtttagactccgacttttcaagcataaatttcaacttccatcaacccaa 18659275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 311 - 501
Target Start/End: Original strand, 19174803 - 19174991
Alignment:
Q  311 tttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattcaagt 410  Q
    |||||| ||||||| |||||  ||||| | |||||| | | ||||||| ||| |  | ||||||| |||| | ||||||||||||||| |||||||||||    
T  19174803 tttcgcgcataaaattcaaattgttaacccgttttcaatgtcgttttcgcctacgcgctcctgacacttaactctatcataatctacataaaattcaagt 19174902  T
Q  411 ttcaaccacccnnnnnnnntcgatttccaaa-cctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatccc 501  Q
    ||||| || ||        ||  |||||||| |||||||||||| ||||||||||||| || ||| |||||||||| |||| ||||||||||    
T  19174903 ttcaagcatcccaaaa---tcattttccaaaacctcacataatcgcttatttgcaaaagcgcttaaacaccgacttctcaaacgaaaatccc 19174991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 686 - 854
Target Start/End: Complemental strand, 20736773 - 20736604
Alignment:
Q  686 taataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgagaccccattaaacataaggaa-actattctcaaa-gtat 783  Q
    ||||||||| |||||||||| |||| ||| |||||| | ||||||| | |||| || ||||||   |||||| ||||| ||| | |||||| ||| ||||    
T  20736773 taataaagttcctagaatagatagttcgtgtaatggtatattaagtttgacttaatcatgagattacattaa-cataaagaacattattcttaaatgtat 20736675  T
Q  784 ccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatga 854  Q
    | |||||||||||||| | |||| |||||||  | |||||| | |||||||||||||| ||||||||||||    
T  20736674 ctgtagtcaagctttaataagaactgggataataataaagcgtcgagactattatgtatgtagactgatga 20736604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 282 - 403
Target Start/End: Complemental strand, 15735576 - 15735455
Alignment:
Q  282 agacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 381  Q
    ||||| || ||||||||| |  ||||||||||||  | |||||||||||| ||||||| ||||| || ||||||||||||| |||| |||| ||  ||||    
T  15735576 agacaacaccagattttccaatttcacgttttcgtgcgtaaaaatcaaactgttaatccgtttttgatgccgttttcacctacatgctcctaacaattag 15735477  T
Q  382 ccctatcataatctacagaaaa 403  Q
    | ||||||||||  ||||||||    
T  15735476 cactatcataatgcacagaaaa 15735455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 686 - 855
Target Start/End: Complemental strand, 17850663 - 17850495
Alignment:
Q  686 taataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgagaccccattaaacataaggaaactattctcaaagtatcc 785  Q
    |||||||||||||| ||||| ||||  ||||  |||||||||| |||  |||| ||| ||| | || |||||| | ||||| |||||||| ||| |||||    
T  17850663 taataaagtccctataatagctagtttgtttgttggaacattatgtaagacttaattgtgatatccaattaaaaacaaggacactattcttaaattatcc 17850564  T
Q  786 gtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 855  Q
     |||||||||||| ||| |||||   ||| |||| ||| ||| |||||||||| | ||||||||||||||    
T  17850563 atagtcaagcttt-ttgtgaagtcaaataacattcaagtatatagactattatatgggtagactgatgat 17850495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 437 - 518
Target Start/End: Complemental strand, 29847569 - 29847488
Alignment:
Q  437 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    ||||||||||||||||| ||| |||||||||| |||||||| ||||||||||||||  |||  ||||||| |||| ||||||    
T  29847569 ccaaacctcacataatctcttgtttgcaaaaatgtttagactccgacttttcaagcataaactccaatttccatcgacccaa 29847488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 564 - 612
Target Start/End: Complemental strand, 25537453 - 25537405
Alignment:
Q  564 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||    
T  25537453 taagccctaatagccaatctatattgactgagtttggctttgtatcatg 25537405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 655 - 710
Target Start/End: Complemental strand, 31258120 - 31258065
Alignment:
Q  655 atttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagt 710  Q
    |||||||||||| |||||||||||||||||||||||||||| ||| |||| |||||    
T  31258120 atttctttattgcttttgttttgtttcaaaataataaagtctctaaaataattagt 31258065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 223
Target Start/End: Complemental strand, 25645854 - 25645740
Alignment:
Q  109 acaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatgtct 208  Q
    |||| |||| ||||||| |||||||| ||||||  | ||| ||||||||||||| || || ||| |||||||||| ||||||||   ||||||| ||  |    
T  25645854 acaatgttaattctttcgtaaaaacacctctagatgattaagataaagtccctatacgtaggaataagtttggaaacaattggatcaaagaaaattgcat 25645755  T
Q  209 ttttaaggtttctag 223  Q
    |||||||||||||||    
T  25645754 ttttaaggtttctag 25645740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 437 - 518
Target Start/End: Complemental strand, 19443326 - 19443246
Alignment:
Q  437 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    ||||||||||||||||| ||||||||| |||||||||| ||  ||||||||||| ||||||  ||||||| |||| ||||||    
T  19443326 ccaaacctcacataatctcttatttgc-aaaacgtttatacttcgacttttcaaacgaaaactccaatttccatcgacccaa 19443246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 282 - 403
Target Start/End: Original strand, 24563047 - 24563168
Alignment:
Q  282 agacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 381  Q
    ||||| |||||||||||| || ||||||||||||| | |||||| | ||| ||||| | |||||||| ||||||||| ||| || | || |||  | |||    
T  24563047 agacagcatcagattttcgaccttcacgttttcgcgcgtaaaaacccaaccgttaacccgttttcgatgccgttttcgcctacacgctcatgagacatag 24563146  T
Q  382 ccctatcataatctacagaaaa 403  Q
    | |||||||||||||| |||||    
T  24563147 ctctatcataatctaccgaaaa 24563168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 564 - 612
Target Start/End: Complemental strand, 13359560 - 13359512
Alignment:
Q  564 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    |||| |||||||||||||||||||| |||||||||| ||||||||||||    
T  13359560 taagtcctaatagccaatctatattcattgggtttgactttgtatcatg 13359512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #77
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 564 - 612
Target Start/End: Complemental strand, 16566611 - 16566563
Alignment:
Q  564 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    |||||||||||||||||||||| ||||||| ||||| ||||||||||||    
T  16566611 taagccctaatagccaatctatgttgattgagtttgactttgtatcatg 16566563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #78
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 439 - 501
Target Start/End: Original strand, 16136053 - 16136115
Alignment:
Q  439 aaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatccc 501  Q
    ||||||||||||||| |||||||||||||| | ||| |||||||||| |||  ||||||||||    
T  16136053 aaacctcacataatcgcttatttgcaaaaatgcttaaacaccgacttctcacacgaaaatccc 16136115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #79
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 437 - 510
Target Start/End: Original strand, 25348115 - 25348188
Alignment:
Q  437 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcat 510  Q
    ||||| |||||||| || ||||||||||| ||||||||||| |||| |||||||||  |||  |||||||||||    
T  25348115 ccaaaactcacatagtctcttatttgcaagaacgtttagactccgaattttcaagcataaactccaattttcat 25348188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #80
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 304 - 416
Target Start/End: Original strand, 26089191 - 26089304
Alignment:
Q  304 ttcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaa 403  Q
    |||||||||||||   |||||| ||||| ||||||| |||||||  || ||||||  || | ||||| |||| |||||||||||| |||| | |||||||    
T  26089191 ttcacgttttcgcatgtaaaaaccaaactgttaatccgttttcggtgctgttttcctctacttgttcatgacacttagccctatcttaatatgcagaaaa 26089290  T
Q  404 -ttcaagtttcaac 416  Q
     |||||||||||||    
T  26089291 tttcaagtttcaac 26089304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #81
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 570 - 612
Target Start/End: Complemental strand, 16394526 - 16394484
Alignment:
Q  570 ctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    ||||||| |||||||||||||||| ||||| ||||||||||||    
T  16394526 ctaatagacaatctatattgattgagtttgactttgtatcatg 16394484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #82
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 583 - 612
Target Start/End: Complemental strand, 189250 - 189221
Alignment:
Q  583 tatattgattgggtttggctttgtatcatg 612  Q
    ||||||||||||||||||||||||||||||    
T  189250 tatattgattgggtttggctttgtatcatg 189221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #83
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 664 - 729
Target Start/End: Complemental strand, 22259990 - 22259925
Alignment:
Q  664 ttgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaa 729  Q
    ||||||||||| |||| |||||||||||| |||||| ||||  |||||| ||||||  ||||||||    
T  22259990 ttgattttgttatgttgcaaaataataaactccctaaaataactagtccatttaatataacattaa 22259925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 207; Significance: 1e-113; HSPs: 105)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 54 - 511
Target Start/End: Complemental strand, 20899421 - 20898966
Alignment:
Q  54 aacaactttctttcctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggata 153  Q
    |||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||| |  |||||||||||||||||||||||||||   |||||||||    
T  20899421 aacaactttcattcctaccccaaggaccaactcatgaactcattagaccctttatacgacattatttctttcctaaaaacatctctagattgttaggata 20899322  T
Q  154 aagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctccc 253  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||  |||||||||||||| |  ||||| |||||| |||||||||||||||    
T  20899321 aagtccctacacttaggaagaagtttggaagcaattggagtgaagaaaattgcatttttaaggtttcttggatgacaaaatcgtggcacgttggtctccc 20899222  T
Q  254 atcgtggcacgatttttccagcatctctagacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccg 353  Q
    ||||||||| |||||||||||  ||   ||||  | ||||||||||||| ||||||||||||| |||||||||||||| ||||| | |||||||| ||||    
T  20899221 atcgtggcatgatttttccagattcgacagacgacttcagattttcaaccttcacgttttcgcacataaaaatcaaaccgttaacccgttttcgatgccg 20899122  T
Q  354 ttttcacctgcatgttcctgactcttagccctatcataatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgatttcc-aaacctcacataa 451  Q
    ||||| |||  | | || |||  |||||| ||||||||||||| || |||||||||| |||||||||||        ||||| ||| |||||||||| ||    
T  20899121 ttttcgcctaaacgctcatgaaacttagctctatcataatctatagaaaaattcaagcttcaaccaccc---aaaaatcgatctccaaaacctcacacaa 20899025  T
Q  452 tcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatc 511  Q
    || ||||||||| |||||||||||||||||||||||||| |||||||| |||||| ||||    
T  20899024 tcacttatttgc-aaaacgtttagacaccgacttttcaaacgaaaatctcaatttccatc 20898966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 200; E-Value: 1e-108
Query Start/End: Original strand, 84 - 506
Target Start/End: Original strand, 15373738 - 15374158
Alignment:
Q  84 ctcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaa 183  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||||| || |||||||||||    
T  15373738 ctcaacaactcattagaccctttatacaacgttatttctttcctaaaaacatctctagatggttaggataaagtccctacacttaggacgaagtttggaa 15373837  T
Q  184 gcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgatttttccagcatctctag 283  Q
    ||| ||||||||||||||| ||  |||||||||||||| || |||||  ||||| ||||||||||||||||||||||||||||| ||||||  |    ||    
T  15373838 gcatttggagtgaagaaaattgcatttttaaggtttctggtatgacatcatcgtggcacgttggtctcccatcgtggcacgattattccagatttgacag 15373937  T
Q  284 acatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagcc 383  Q
    ||  | ||||||||||||| ||||||||||||  |||||||||||||  ||||| | |||||||| ||||||||||||| || ||||||||| |||||||    
T  15373938 acgacttcagattttcaaccttcacgttttcggacataaaaatcaaatggttaacccgttttcgatgccgttttcacctacacgttcctgacacttagcc 15374037  T
Q  384 ctatcataatctacagaaa-attcaagtttcaaccacccnnnnnnnntcgattt-ccaaacctcacataatcccttatttgcaaaaacgtttagacaccg 481  Q
     |||||||||||| | ||| |||||||||||||||||||        | ||||| ||||||||||||||||| ||||||||| |||||||||||||||||    
T  15374038 ttatcataatctataaaaagattcaagtttcaaccaccc---aaaaattgatttcccaaacctcacataatctcttatttgc-aaaacgtttagacaccg 15374133  T
Q  482 acttttcaagcgaaaatcccaattt 506  Q
    ||| ||||| |||||||||||||||    
T  15374134 actattcaaacgaaaatcccaattt 15374158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 200; E-Value: 1e-108
Query Start/End: Original strand, 648 - 855
Target Start/End: Complemental strand, 19926967 - 19926760
Alignment:
Q  648 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgag 747  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  19926967 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 19926868  T
Q  748 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 847  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19926867 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 19926768  T
Q  848 ctgatgat 855  Q
    ||||||||    
T  19926767 ctgatgat 19926760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 56 - 518
Target Start/End: Original strand, 27028128 - 27028584
Alignment:
Q  56 caactttctttcctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaa 155  Q
    |||||| | ||||||||||| |||||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||    
T  27028128 caacttccattcctaccccaaggaccaacccatgaactcattagaccctttatacaacgttatttctttcctaaaaacatctctagatggttaggataaa 27028227  T
Q  156 gtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccat 255  Q
    ||||||||||||| |||||| |||||||||| ||||||||||||||| ||  |||||||||||||| | ||||||||||||| |||||||||||||||||    
T  27028228 gtccctacacttaggaagaattttggaagcatttggagtgaagaaaattgcatttttaaggtttcttgggtgacagaatcgtggcacgttggtctcccat 27028327  T
Q  256 cgtggcacgatttttccagcatctctagacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgtt 355  Q
    |||||||||||||||||||  ||   ||||  | ||||||||||||| ||||||||||||| |||||||||||||| |   | | |||||||| ||||||    
T  27028328 cgtggcacgatttttccagattcgacagacgacttcagattttcaaccttcacgttttcgcacataaaaatcaaaccg---acccgttttcgatgccgtt 27028424  T
Q  356 ttcacctgcatgttcctgactcttagccctatcataatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgattt-ccaaacctcacataatc 453  Q
    ||| |||  | | ||||||| |||||| |||||||||||||||| ||||||||||||||||||||||        | ||||| ||||| ||||||| |||    
T  27028425 ttcgcctaaacgctcctgacacttagctctatcataatctacagaaaaattcaagtttcaaccaccc---aaaaattgatttcccaaaactcacatgatc 27028521  T
Q  454 ccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    |||||||||| |||||| || |||||| || |||||| |  |||||||||||||||| |||||||    
T  27028522 ccttatttgc-aaaacg-ttggacaccaacctttcaaacataaatcccaattttcattaacccaa 27028584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 68 - 518
Target Start/End: Original strand, 22354070 - 22354517
Alignment:
Q  68 ctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacactt 167  Q
    |||||||| ||  |||||||  ||||||||||||||||||||||| |||||||| |||||||||||||||||||  ||||||||||||||||| ||||||    
T  22354070 ctaccccaaggttcaactcataaactcattagaccctttatacaaggttatttccttcctaaaaacatctctagatggttaggataaagtccccacactt 22354169  T
Q  168 atgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgatt 267  Q
    | ||||||||||||||||| ||||||||||||||| || | ||||| ||||||| |  ||||| |||||| |||||||||||||||||||||||||||||    
T  22354170 aggaagaagtttggaagcatttggagtgaagaaaattg-cattttagggtttcttggatgacaaaatcgtggcacgttggtctcccatcgtggcacgatt 22354268  T
Q  268 tttccagcatctctagacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatg 367  Q
    |||||||  ||   ||||  | ||||||||||||| ||||||||||||||| |||||| ||||| ||||| | |||||||| ||||||||| |||  | |    
T  22354269 tttccagattcgacagacgacttcagattttcaaccttcacgttttcgctcttaaaaaccaaaccgttaacccgttttcgatgccgttttcgcctaaacg 22354368  T
Q  368 ttcctgactcttagccctatcataatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgatttcc-aaacctcacataatcccttatttgcaa 465  Q
     ||||||| |||||||||||||||||||| || ||||||||||||| ||||||||        ||| ||||| ||||||||||||||| ||||||||| |    
T  22354369 ctcctgacacttagccctatcataatctatagaaaaattcaagtttaaaccaccc---aaaaatcggtttccaaaacctcacataatcacttatttgc-a 22354464  T
Q  466 aaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    ||||||||||||||||| | ||||||||||||| ||| |||||||||||||||    
T  22354465 aaacgtttagacaccgaatcttcaagcgaaaattccagttttcatcaacccaa 22354517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 648 - 855
Target Start/End: Original strand, 26970463 - 26970670
Alignment:
Q  648 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgag 747  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  26970463 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 26970562  T
Q  748 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 847  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26970563 accccattaaacataaggaaactattctcaaagtatccgtagtcaagatttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 26970662  T
Q  848 ctgatgat 855  Q
    ||||||||    
T  26970663 ctgatgat 26970670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 648 - 855
Target Start/End: Original strand, 55612683 - 55612890
Alignment:
Q  648 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgag 747  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  55612683 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 55612782  T
Q  748 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 847  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55612783 accccattaaacataaggaaactactctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 55612882  T
Q  848 ctgatgat 855  Q
    ||||||||    
T  55612883 ctgatgat 55612890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 648 - 855
Target Start/End: Original strand, 5707320 - 5707527
Alignment:
Q  648 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgag 747  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||    
T  5707320 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 5707419  T
Q  748 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 847  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  5707420 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtaga 5707519  T
Q  848 ctgatgat 855  Q
    ||||||||    
T  5707520 ctgatgat 5707527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 648 - 855
Target Start/End: Original strand, 26963640 - 26963847
Alignment:
Q  648 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgag 747  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||||    
T  26963640 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaaatataacttaattgtgag 26963739  T
Q  748 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 847  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26963740 accccattaaacataaggaaactattctcaaagtatccgtagtcaagatttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 26963839  T
Q  848 ctgatgat 855  Q
    ||||||||    
T  26963840 ctgatgat 26963847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 648 - 855
Target Start/End: Original strand, 5713948 - 5714155
Alignment:
Q  648 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgag 747  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| ||| ||||    
T  5713948 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagcccatttaatggaacattaagtataacttaattgtgag 5714047  T
Q  748 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 847  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  5714048 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtaga 5714147  T
Q  848 ctgatgat 855  Q
    ||||||||    
T  5714148 ctgatgat 5714155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 648 - 855
Target Start/End: Complemental strand, 10621540 - 10621333
Alignment:
Q  648 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgag 747  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  10621540 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctggaatagttagtccgtttaatggaacattaagtataacttaattgtgag 10621441  T
Q  748 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 847  Q
    | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10621440 agcccattaaacataaggaaactattctcaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 10621341  T
Q  848 ctgatgat 855  Q
    ||||||||    
T  10621340 ctgatgat 10621333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 185; E-Value: 1e-99
Query Start/End: Original strand, 84 - 511
Target Start/End: Original strand, 16223787 - 16224211
Alignment:
Q  84 ctcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaa 183  Q
    ||||| |||||||||||||||||||||||  |||||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||||    
T  16223787 ctcaacaactcattagaccctttatacaacattatttctttcctaaaaacatctctagatggttaggataaagtccctacacttaggaagaagtttggaa 16223886  T
Q  184 gcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgatttttccagcatctctag 283  Q
    || |||||||||||| ||| ||  |||||||||||||| || |||||  ||||| ||||||||||||||||||||||||||||| ||||||  |    ||    
T  16223887 gc-attggagtgaagcaaattgcatttttaaggtttctggtatgacatcatcgtggcacgttggtctcccatcgtggcacgattattccagatttgacag 16223985  T
Q  284 acatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagcc 383  Q
    ||  | |||||||||||||  |||||||||||  |||||||||||||| ||||| | |||||||| | |||||||  || || | ||||||| |||||||    
T  16223986 acgacttcagattttcaaccatcacgttttcggacataaaaatcaaaccgttaacccgttttcgatgtcgttttcgtctacacgctcctgacacttagcc 16224085  T
Q  384 ctatcataatctacagaaa-attcaagtttcaaccacccnnnnnnnntcgattt-ccaaacctcacataatcccttatttgcaaaaacgtttagacaccg 481  Q
    ||||||||||||||| ||| |||||||||||||||||||        ||||||| ||||||||||||||||| ||||||| | |||||||||||||||||    
T  16224086 ctatcataatctacaaaaagattcaagtttcaaccaccc---aaaactcgatttcccaaacctcacataatctcttattt-ccaaaacgtttagacaccg 16224181  T
Q  482 acttttcaagcgaaaatcccaattttcatc 511  Q
    ||| ||||| ||||||||||||||| ||||    
T  16224182 actattcaaacgaaaatcccaatttccatc 16224211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 184; E-Value: 4e-99
Query Start/End: Original strand, 648 - 855
Target Start/End: Original strand, 868597 - 868804
Alignment:
Q  648 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgag 747  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||    
T  868597 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 868696  T
Q  748 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 847  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  868697 accccgttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 868796  T
Q  848 ctgatgat 855  Q
    ||||||||    
T  868797 ctgatgat 868804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 184; E-Value: 4e-99
Query Start/End: Original strand, 648 - 855
Target Start/End: Complemental strand, 10628619 - 10628412
Alignment:
Q  648 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgag 747  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  10628619 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctggaatagttagtccgtttaatggaacattaagtataacttaattgtgag 10628520  T
Q  748 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 847  Q
    | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  10628519 agcccattaaacataaggaaactattctcaaagtatctgtagtcaagctttattgagaagtgggatattattaaagcatagagactattatgtaggtaga 10628420  T
Q  848 ctgatgat 855  Q
    ||||||||    
T  10628419 ctgatgat 10628412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 182; E-Value: 6e-98
Query Start/End: Original strand, 650 - 855
Target Start/End: Original strand, 18262214 - 18262419
Alignment:
Q  650 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgagac 749  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  18262214 aaggcatttctttattgattttgtttcgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 18262313  T
Q  750 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 849  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  18262314 cccgttaaacataaggaaactattctcaaagtatccgtagtcaagctttgatgagaagtgggatatcattaaagcatagagactattatgtaggtagact 18262413  T
Q  850 gatgat 855  Q
    ||||||    
T  18262414 gatgat 18262419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 180; E-Value: 1e-96
Query Start/End: Original strand, 84 - 511
Target Start/End: Original strand, 15371457 - 15371871
Alignment:
Q  84 ctcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaa 183  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||| | ||||||||||||||    
T  15371457 ctcaacaactcattagaccctttatacaacgttatttctttcctaaaaacatctctagatggttaggataaagtccctacactcaggaagaagtttggaa 15371556  T
Q  184 gcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgatttttccagcatctctag 283  Q
    ||||||||||||||||||| ||  |||||||||||||| || |||||  ||||| ||||||||||||||||||||||||||||||||||||  |    ||    
T  15371557 gcaattggagtgaagaaaattgcatttttaaggtttctggtatgacatcatcgtggcacgttggtctcccatcgtggcacgatttttccagatttgacag 15371656  T
Q  284 acatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagcc 383  Q
    ||  | ||||||||||||| ||||||||||||  |||||||||||||| |||||             |||||||| ||| || | ||||||| |||||||    
T  15371657 acgacttcagattttcaaccttcacgttttcggacataaaaatcaaaccgttaa------------cccgttttcgcctacacgctcctgacacttagcc 15371744  T
Q  384 ctatcataatctacagaaa-attcaagtttcaaccacccnnnnnnnntcgattt-ccaaacctcacataatcccttatttgcaaaaacgtttagacaccg 481  Q
    ||||||||||||||| ||| |||||||||||||| ||||        ||||||| ||||||||||||||||| ||||||||| |||||||||||||||||    
T  15371745 ctatcataatctacaaaaagattcaagtttcaactaccc--aaaaaatcgatttcccaaacctcacataatctcttatttgc-aaaacgtttagacaccg 15371841  T
Q  482 acttttcaagcgaaaatcccaattttcatc 511  Q
    ||| ||||| ||||||||||||||| ||||    
T  15371842 actattcaaacgaaaatcccaatttccatc 15371871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 650 - 855
Target Start/End: Complemental strand, 28393339 - 28393134
Alignment:
Q  650 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgagac 749  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  28393339 aaggcatttctttattgattttgatttgtttcaaaataataaagtccctaaaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 28393240  T
Q  750 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 849  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  28393239 cccattaaacataaggaaactattcttaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtgggtagact 28393140  T
Q  850 gatgat 855  Q
    ||||||    
T  28393139 gatgat 28393134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 174; E-Value: 4e-93
Query Start/End: Original strand, 650 - 855
Target Start/End: Complemental strand, 4426808 - 4426604
Alignment:
Q  650 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgagac 749  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  4426808 aaggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 4426709  T
Q  750 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 849  Q
    ||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  4426708 cccgttaaacataagg-aactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtgggtagact 4426610  T
Q  850 gatgat 855  Q
    ||||||    
T  4426609 gatgat 4426604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 172; E-Value: 6e-92
Query Start/End: Original strand, 85 - 511
Target Start/End: Original strand, 15367939 - 15368362
Alignment:
Q  85 tcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaag 184  Q
    |||| |||||||||||||||||||||||  |||||||||||||||||||||||||||  |||||||||||||||| |||||||| |||||||||||||||    
T  15367939 tcaacaactcattagaccctttatacaactttatttctttcctaaaaacatctctagatggttaggataaagtccttacacttaggaagaagtttggaag 15368038  T
Q  185 caattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgatttttccagcatctctaga 284  Q
    || ||||||||||||||| ||  |||||||||||||| || |||||  ||| | ||||||||||||||||||||||||||||| ||||||  |    |||    
T  15368039 catttggagtgaagaaaattgcatttttaaggtttctggtatgacatcatcatggcacgttggtctcccatcgtggcacgattattccagatttgacaga 15368138  T
Q  285 catcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccc 384  Q
    |  | | ||||||||||| |||||| |||||  |||||||||||||| ||||| | |||||||| | ||||||| ||| || | ||||||| ||||||||    
T  15368139 cgactttagattttcaaccttcacg-tttcggacataaaaatcaaaccgttaacccgttttcgatgtcgttttcgcctacacgctcctgacacttagccc 15368237  T
Q  385 tatcataatctacagaaa-attcaagtttcaaccacccnnnnnnnntcga-tttccaaacctcacataatcccttatttgcaaaaacgtttagacaccga 482  Q
    |||||||||||||| ||| |||||||||||||||||||        |||| || ||||||||||||||||  ||||||||| ||||||||||||| ||||    
T  15368238 tatcataatctacaaaaagattcaagtttcaaccaccc---aaaaatcgacttgccaaacctcacataatttcttatttgc-aaaacgtttagacgccga 15368333  T
Q  483 cttttcaagcgaaaatcccaattttcatc 511  Q
    || ||||| ||||||||||||||| ||||    
T  15368334 ctattcaatcgaaaatcccaatttccatc 15368362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 650 - 855
Target Start/End: Original strand, 18269070 - 18269280
Alignment:
Q  650 aaggcatttctttattgatttt-----gttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattat 744  Q
    ||||||||||||||||||||||     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |    
T  18269070 aaggcatttctttattgattttgttttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgt 18269169  T
Q  745 gagaccccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggt 844  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  18269170 gagaccccgttaaacataaggaaactattctcaaagtatccgtagtcaagctttgatgagaagtgggatatcattaaagcatagagactattatgtaggt 18269269  T
Q  845 agactgatgat 855  Q
    |||||||||||    
T  18269270 agactgatgat 18269280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 165; E-Value: 9e-88
Query Start/End: Original strand, 54 - 420
Target Start/End: Complemental strand, 4615727 - 4615359
Alignment:
Q  54 aacaactttctttcctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggata 153  Q
    |||||||| | |||||||||||  |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||  ||||| ||||    
T  4615727 aacaacttccattcctaccccaaagaccaactcatgaactcattagaccctttatacaaagttatttccttcctaaaaacatctctagatggttacgata 4615628  T
Q  154 aagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctccc 253  Q
    |||||||||||||||  ||||||| |||||||| ||||||||||||||| ||  |||||||||||||| || |||||  ||||| |||||||||||||||    
T  4615627 aagtccctacacttagcaagaagtctggaagcatttggagtgaagaaaattgcatttttaaggtttctggtatgacatcatcgtggcacgttggtctccc 4615528  T
Q  254 atcgtggcacgatttttccagcatc-tctagacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgcc 352  Q
    ||||||||||||||||| ||  |||    ||| | |||||||||| |||| ||||||||||||| |||||||| ||||| |||||   || ||||| |||    
T  4615527 atcgtggcacgattttttcaaaatcggacagaaaacatcagatttccaaccttcacgttttcgcgcataaaaaccaaaccgttaactcgtcttcgatgcc 4615428  T
Q  353 gttttcacctgcatgttcctgactcttagccctatcataatctacag-aaaattcaagtttcaaccacc 420  Q
    |||||| ||| || |  |||||| |||||| |||||||||||||||| |||||| ||||||||||||||    
T  4615427 gttttcgcctacacgcacctgacacttagctctatcataatctacagaaaaattgaagtttcaaccacc 4615359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 660 - 855
Target Start/End: Original strand, 8845215 - 8845410
Alignment:
Q  660 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgagaccccattaaac 759  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||| ||||||    
T  8845215 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagatcccgttaaac 8845314  T
Q  760 ataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 855  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||    
T  8845315 ataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtcggatatcattaaagcatagagactattatgtgggtaggctgatgat 8845410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 660 - 855
Target Start/End: Original strand, 8858179 - 8858374
Alignment:
Q  660 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgagaccccattaaac 759  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||| ||||||    
T  8858179 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagatcccgttaaac 8858278  T
Q  760 ataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 855  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||    
T  8858279 ataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtcggatatcattaaagcatagagactattatgtgggtaggctgatgat 8858374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 142; E-Value: 5e-74
Query Start/End: Original strand, 85 - 421
Target Start/End: Original strand, 15402952 - 15403287
Alignment:
Q  85 tcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaag 184  Q
    |||| |||||||||||||||||||||||  |||||||||||||||||||||||||||  |||||||||||||||| |||||||| |||||||||||||||    
T  15402952 tcaacaactcattagaccctttatacaactttatttctttcctaaaaacatctctagatggttaggataaagtccttacacttaggaagaagtttggaag 15403051  T
Q  185 caattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgatttttccagcatctctaga 284  Q
    || ||||||||||||||| ||  |||||||||||||| || |||||  ||| | ||||||||||||||||||||||||||||| ||||||  |    |||    
T  15403052 catttggagtgaagaaaattgcatttttaaggtttctggtatgacatcatcatggcacgttggtctcccatcgtggcacgattattccagatttgacaga 15403151  T
Q  285 catcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccc 384  Q
    |  | | ||||||||||| |||||| |||||  |||||||||||||| ||| | | |||||||| | ||||||| ||| || | ||||||| ||||||||    
T  15403152 cgactttagattttcaaccttcacg-tttcggacataaaaatcaaaccgtt-acccgttttcgatgtcgttttcgcctacacgctcctgacacttagccc 15403249  T
Q  385 tatcataatctacagaaa-attcaagtttcaaccaccc 421  Q
    |||||||||||||| ||| |||||||||||| ||||||    
T  15403250 tatcataatctacaaaaagattcaagtttcacccaccc 15403287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 130; E-Value: 7e-67
Query Start/End: Original strand, 81 - 274
Target Start/End: Complemental strand, 26922179 - 26921987
Alignment:
Q  81 caactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttg 180  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||  ||||| |||||    
T  26922179 caacacaagaactcattagaccctttatacaaagttatttttttcctaaaaacatctctagatggttaggataaagtccctacacttgggaagaggtttg 26922080  T
Q  181 gaagcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgatttttccag 274  Q
    ||| |||||||||||||||||| ||  |||||||||||||||||||||||| ||||| |||||||||||||||| |||| ||||||||||||||    
T  26922079 gaaacaattggagtgaagaaaattgcatttttaaggtttctagtgtgacag-atcgtggcacgttggtctcccaccgtgacacgatttttccag 26921987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 65 - 274
Target Start/End: Original strand, 16157118 - 16157326
Alignment:
Q  65 ttcctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctaca 164  Q
    ||||||||||| |||||| |||| |||||||||||||||||||||||| ||||| |||||||||||||||||||||   |||||||||||||||||||||    
T  16157118 ttcctaccccaaggacca-ctcatgaactcattagaccctttatacaacgttatatctttcctaaaaacatctctatatggttaggataaagtccctaca 16157216  T
Q  165 cttatgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacg 264  Q
    |||| ||| ||||||||||||| ||||||||||||||| ||  |||||||||||| | |  |||||| ||||| |||||||||||||||||||||||| |    
T  16157217 cttaggaaaaagtttggaagcatttggagtgaagaaaattgcatttttaaggtttattggatgacagcatcgtggcacgttggtctcccatcgtggcatg 16157316  T
Q  265 atttttccag 274  Q
    ||||||||||    
T  16157317 atttttccag 16157326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 54 - 244
Target Start/End: Complemental strand, 14933102 - 14932912
Alignment:
Q  54 aacaactttctttcctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggata 153  Q
    |||||||| | ||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||    
T  14933102 aacaacttccattcctaccccaaggaccaactcatgaactcattagaccctttatacaatgttatttctttcctaaaaacatctctagatggttaggata 14933003  T
Q  154 aagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgt 244  Q
    ||||||||||||||| ||||||||||||||||| |||||||||| |||| ||  |||||||||||||| || |||||  ||||| ||||||    
T  14933002 aagtccctacacttaggaagaagtttggaagcatttggagtgaataaaattgcatttttaaggtttctggtatgacatcatcgtggcacgt 14932912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 54 - 244
Target Start/End: Complemental strand, 14942307 - 14942117
Alignment:
Q  54 aacaactttctttcctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggata 153  Q
    |||||||| | ||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||   |||||||||    
T  14942307 aacaacttccattcctaccccaaggaccaactcatgaactcattagaccctttatacaatgttatttctttcctaaaaacatctctagattgttaggata 14942208  T
Q  154 aagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgt 244  Q
    ||||||||||||||| ||||||||||||||||| |||||||||| |||| ||  |||||||||||||| || |||||  ||||| ||||||    
T  14942207 aagtccctacacttaggaagaagtttggaagcatttggagtgaataaaattgcatttttaaggtttctggtatgacatcatcgtggcacgt 14942117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 54 - 205
Target Start/End: Original strand, 18230050 - 18230201
Alignment:
Q  54 aacaactttctttcctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggata 153  Q
    |||||||||| |||||||||||  |||||||||| ||||||||||| |||||||||||| |||||||| | ||||||||||||||||| |||||||||||    
T  18230050 aacaactttcattcctaccccaaagaccaactcatgaactcattagcccctttatacaaggttatttcatacctaaaaacatctctagacggttaggata 18230149  T
Q  154 aagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatg 205  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18230150 aagtccctacacttaggaagaagtttggaagcaattggagtgaagaaaaatg 18230201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 68 - 211
Target Start/End: Complemental strand, 4830884 - 4830741
Alignment:
Q  68 ctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacactt 167  Q
    ||||||||  |||||||||| ||||||||||| |||||||||||| |||||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  4830884 ctaccccaaagaccaactcatgaactcattagcccctttatacaaggttatttcttacctaaaaacatctctagacggttaggataaagtccctacactt 4830785  T
Q  168 atgaagaagtttggaagcaattggagtgaagaaaaatgtctttt 211  Q
    | ||||||||||||||||||||||||||||||||||||| ||||    
T  4830784 aggaagaagtttggaagcaattggagtgaagaaaaatgtatttt 4830741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 68 - 211
Target Start/End: Complemental strand, 4834179 - 4834036
Alignment:
Q  68 ctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacactt 167  Q
    ||||||||  |||||||||| ||||||||||| |||||||||||| |||||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  4834179 ctaccccaaagaccaactcatgaactcattagcccctttatacaaggttatttcttacctaaaaacatctctagacggttaggataaagtccctacactt 4834080  T
Q  168 atgaagaagtttggaagcaattggagtgaagaaaaatgtctttt 211  Q
    | ||||||||||||||||||||||||||||||||||||| ||||    
T  4834079 aggaagaagtttggaagcaattggagtgaagaaaaatgtatttt 4834036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 648 - 763
Target Start/End: Original strand, 12357136 - 12357251
Alignment:
Q  648 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgag 747  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  12357136 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 12357235  T
Q  748 accccattaaacataa 763  Q
    ||||||||||||||||    
T  12357236 accccattaaacataa 12357251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 54 - 205
Target Start/End: Complemental strand, 2584868 - 2584714
Alignment:
Q  54 aacaactttctttcctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcgg---ttagg 150  Q
    |||||||| | ||| ||||||| | |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||   |||||    
T  2584868 aacaacttccattcttaccccaagaaccaactcaataactcattagaccctttatacaaggttatttctttcctaaaaacatctctagacggttattagg 2584769  T
Q  151 ataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatg 205  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  2584768 ataaagtccttacacttaggaagaagtttggaagcaattggagtgaagaaaaatg 2584714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 656 - 855
Target Start/End: Original strand, 20311299 - 20311499
Alignment:
Q  656 tttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaag-tataactttattatgagaccccat 754  Q
    ||||||||||||||||||||||||| ||||||||||||| | || |||||||| |  ||| |||||| ||||||| |||||||| ||| |||||||||||    
T  20311299 tttctttattgattttgttttgttttaaaataataaagtacttataatagttaatatgttcaatggagcattaaggtataacttaattgtgagaccccat 20311398  T
Q  755 taaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatga 854  Q
    |||||||||||| ||| || | |||||||  || |||||||||||||| |||||| |||||||||||||||||||||||||| ||| |||||| ||||||    
T  20311399 taaacataaggacactgtttttaaagtatttgttgtcaagctttattgtgaagtgagatatcattaaagcatagagactattttgtgggtagattgatga 20311498  T
Q  855 t 855  Q
    |    
T  20311499 t 20311499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 56 - 205
Target Start/End: Original strand, 13446845 - 13446993
Alignment:
Q  56 caactttctttcctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaa 155  Q
    |||||||| ||||||||| | | ||||||||| ||||||||||| |||||||||||| |||||||| | |||||||||||||||||  ||||||||||||    
T  13446845 caactttcattcctacccaaag-accaactcatgaactcattagcccctttatacaaggttatttcatacctaaaaacatctctagatggttaggataaa 13446943  T
Q  156 gtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatg 205  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  13446944 gtccctacacttaggaagaagtttggaagcaattggagtgaagaaaaatg 13446993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 95 - 205
Target Start/End: Original strand, 6512003 - 6512113
Alignment:
Q  95 attagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattggagt 194  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  6512003 attagaccctttatacaaggttatttctttcctaaaaacatctatagacggttaggataaagtccctacacttaggaagaagtttggaagcaattggagt 6512102  T
Q  195 gaagaaaaatg 205  Q
    |||||||||||    
T  6512103 gaagaaaaatg 6512113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 283 - 518
Target Start/End: Original strand, 14280854 - 14281088
Alignment:
Q  283 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 382  Q
    |||| ||||||||||||| | ||||||||||||| | |||||||||||| ||||| | |||||||| ||||||||| ||| |  | ||||||| | ||||    
T  14280854 gacagcatcagattttcacccttcacgttttcgcgcctaaaaatcaaaccgttaacccgttttcgatgccgttttcgcctacgcgctcctgacacatagc 14280953  T
Q  383 cctatcataatctacagaaaa-ttcaagtttcaaccacccnnnnnnnntcgatttccaaa-cctcacataatcccttatttgcaaaaacgtttagacacc 480  Q
     |||||| ||||||||||||| ||  ||||||||||||||        ||| |||||||| |||||||||||| || |||||||||||| ||||||||||    
T  14280954 tctatcacaatctacagaaaaatttcagtttcaaccacccaaaaa---tcggtttccaaaacctcacataatcactcatttgcaaaaacatttagacacc 14281050  T
Q  481 gacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  14281051 gactcttcaagcgaaaatcccaattttcatcaatccaa 14281088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 238 - 492
Target Start/End: Complemental strand, 14931615 - 14931362
Alignment:
Q  238 agcacgttggtctcccatcgtggcacgatttttccagcatctct-agacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagtta 336  Q
    ||||||||||||||||||||||||||||||||||||| |||    ||||| |||||||||| |||| ||||||||||| | | |||||| ||||| ||||    
T  14931615 agcacgttggtctcccatcgtggcacgatttttccagaatcggacagacaacatcagatttccaaccttcacgttttcacgcgtaaaaaccaaaccgtta 14931516  T
Q  337 atctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacag-aaaattcaagtttcaaccacccnnnnnnnntcga-t 434  Q
    | | ||||| || ||||||||| ||| |  | ||||||| ||| || ||||||||||||| || ||||||||||||||||||||||        |||| |    
T  14931515 acccgtttttgatgccgttttcgcctacccgctcctgacacttggctctatcataatctatagaaaaattcaagtttcaaccaccc---aaaaatcgatt 14931419  T
Q  435 ttccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagc 492  Q
    ||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||    
T  14931418 ttccaaacctcacataatctcttatttgc-aaaacgtttagactccgacttttcaagc 14931362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 91 - 274
Target Start/End: Complemental strand, 15852436 - 15852253
Alignment:
Q  91 actcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattg 190  Q
    ||||| |||||||| || |||| |||| ||||||| ||||| || | ||||  ||||||||||||||||||| ||||| |||||||||||||| ||||||    
T  15852436 actcactagaccctatacacaatgttaattctttcataaaagcacccctagatggttaggataaagtccctatacttaggaagaagtttggaaacaattg 15852337  T
Q  191 gagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgatttttccag 274  Q
    || ||||||||| ||  |||||||||||||||||  ||||  ||||| |||||||||||||||||| |||||||||||||||||    
T  15852336 gaatgaagaaaattgcatttttaaggtttctagtaagacaacatcgtggcacgttggtctcccatcctggcacgatttttccag 15852253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 327 - 518
Target Start/End: Original strand, 6512273 - 6512462
Alignment:
Q  327 caaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaa-ttcaagtttcaaccacccnnnn 425  Q
    ||||| ||||| | |||||||| ||||||||| |||  ||| ||||||  |||||| |||||||||||||||||||| ||||||||||||||||||        
T  6512273 caaaccgttaacccgttttcgatgccgttttcgcctatatgctcctgaaacttagctctatcataatctacagaaaaattcaagtttcaaccacccaaaa 6512372  T
Q  426 nnnntcgatttcc-aaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
        ||||||||| ||||||||||||||| ||||||||||||| |||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  6512373 a---tcgatttcccaaacctcacataatctcttatttgcaaaa-cgtttagacaccgatttttcaaacgaaaatcccaattttcatcaacccaa 6512462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 282 - 421
Target Start/End: Complemental strand, 52266344 - 52266205
Alignment:
Q  282 agacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 381  Q
    ||||| ||| ||||||||||| ||||||||||||| |||||||||||||| ||||||| |||||||| | ||||||||||| ||||||| |||| |||||    
T  52266344 agacagcataagattttcaaccttcacgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgtcgttttcacctacatgttcatgacacttag 52266245  T
Q  382 ccctatcataatctacagaaaattcaagtttcaaccaccc 421  Q
    ||||||| |||| |||||||||||||||||||||| ||||    
T  52266244 ccctatcttaatgtacagaaaattcaagtttcaacaaccc 52266205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 65 - 221
Target Start/End: Complemental strand, 54798650 - 54798493
Alignment:
Q  65 ttcctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaa-catctctagtcggttaggataaagtccctac 163  Q
    |||||||||||  |||||||||| |||||||||||||||||||||||| ||||| || |||||||||| |||||||||  | |||||||||||| |||||    
T  54798650 ttcctaccccaaagaccaactcatgaactcattagaccctttatacaaggttatctccttcctaaaaaacatctctagatgattaggataaagttcctac 54798551  T
Q  164 acttatgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggtttct 221  Q
    ||||| |||||||| ||||| || ||||||||||||||| ||  ||||||||||||||    
T  54798550 acttaagaagaagtctggaaacatttggagtgaagaaaattgcatttttaaggtttct 54798493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 65 - 221
Target Start/End: Original strand, 14280537 - 14280693
Alignment:
Q  65 ttcctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctaca 164  Q
    |||||||||||  |||||||| | ||||||| |||||||||||||||| ||||| || |||||||||| ||||||||  | |||||||||||| ||||||    
T  14280537 ttcctaccccaaagaccaacttatgaactcaatagaccctttatacaaggttatctccttcctaaaaatatctctagatgattaggataaagttcctaca 14280636  T
Q  165 cttatgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggtttct 221  Q
    |||| |||||||| ||||| || ||||||||||||||| ||  ||||||||||||||    
T  14280637 cttaagaagaagtctggaaacatttggagtgaagaaaattgcatttttaaggtttct 14280693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 83 - 202
Target Start/End: Complemental strand, 11202105 - 11201987
Alignment:
Q  83 actcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttgga 182  Q
    ||||| ||||||||||||||||| | |||| ||||| |||||||||||||||||||||  || ||||||||||||||||||||||| |||||||||||||    
T  11202105 actcatgaactcattagacccttaa-acaacgttatatctttcctaaaaacatctctatacgtttaggataaagtccctacacttaggaagaagtttgga 11202007  T
Q  183 agcaattggagtgaagaaaa 202  Q
    |||| |||||||||||||||    
T  11202006 agcatttggagtgaagaaaa 11201987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 83 - 202
Target Start/End: Complemental strand, 11208836 - 11208718
Alignment:
Q  83 actcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttgga 182  Q
    ||||| ||||||||||||||||| | |||| ||||| |||||||||||||||||||||  || ||||||||||||||||||||||| |||||||||||||    
T  11208836 actcatgaactcattagacccttaa-acaacgttatatctttcctaaaaacatctctatacgtttaggataaagtccctacacttaggaagaagtttgga 11208738  T
Q  183 agcaattggagtgaagaaaa 202  Q
    |||| |||||||||||||||    
T  11208737 agcatttggagtgaagaaaa 11208718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 283 - 513
Target Start/End: Complemental strand, 54798352 - 54798123
Alignment:
Q  283 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 382  Q
    |||| |||||||||| || | ||||||||||||| | |||||| ||||| ||||| | |||||||| ||||||||| ||| |  | ||||||| | ||||    
T  54798352 gacagcatcagatttccacccttcacgttttcgcgcctaaaaaacaaaccgttaacccgttttcgatgccgttttcgcctacgcgctcctgacacatagc 54798253  T
Q  383 cctatcataatctacagaaaa-ttcaagtttcaaccacccnnnnnnnntcgatttccaaa-cctcacataatcccttatttgcaaaaacgtttagacacc 480  Q
     |||||| ||||||||||||| ||| ||||||||||||||        ||| |||||||| ||||||||||||  | || ||||||||| ||||||||||    
T  54798252 tctatcacaatctacagaaaaattccagtttcaaccacccaaaaa---tcggtttccaaaacctcacataatcagtcatatgcaaaaacatttagacacc 54798156  T
Q  481 gacttttcaagcgaaaatcccaattttcatcaa 513  Q
    |||| ||||||||||||||||||||||||||||    
T  54798155 gactcttcaagcgaaaatcccaattttcatcaa 54798123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 282 - 518
Target Start/End: Complemental strand, 4830605 - 4830371
Alignment:
Q  282 agacatcatcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactctta 380  Q
    ||||| |||||||||||| ||  ||||||||||||| |||||||  ||||| ||||| | |||||||| ||||||||| ||| || | ||||||| ||||    
T  4830605 agacaacatcagattttctaatcttcacgttttcgcgcataaaatccaaaccgttaacccgttttcgatgccgttttcgcctacacgctcctgacactta 4830506  T
Q  381 gccctatcataatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgatttcca-aacctcacataatcccttatttgcaaaaacgtttagaca 478  Q
    || |||||||||||||||| ||||||||||||||||||||||        | |||||||| |||||||||||||| ||||||||| |||||| || ||||    
T  4830505 gctctatcataatctacagaaaaattcaagtttcaaccaccc---aaaaattgatttccagaacctcacataatcacttatttgc-aaaacg-ttggaca 4830411  T
Q  479 ccgacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    |||||||||||| |  |||| ||||||||||| |||||||    
T  4830410 ccgacttttcaaacataaattccaattttcattaacccaa 4830371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 282 - 518
Target Start/End: Complemental strand, 4833900 - 4833666
Alignment:
Q  282 agacatcatcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactctta 380  Q
    ||||| |||||||||||| ||  ||||||||||||| |||||||  ||||| ||||| | |||||||| ||||||||| ||| || | ||||||| ||||    
T  4833900 agacaacatcagattttctaatcttcacgttttcgcgcataaaatccaaaccgttaacccgttttcgatgccgttttcgcctacacgctcctgacactta 4833801  T
Q  381 gccctatcataatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgatttcca-aacctcacataatcccttatttgcaaaaacgtttagaca 478  Q
    || |||||||||||||||| ||||||||||||||||||||||        | |||||||| |||||||||||||| ||||||||| |||||| || ||||    
T  4833800 gctctatcataatctacagaaaaattcaagtttcaaccaccc---aaaaattgatttccagaacctcacataatcacttatttgc-aaaacg-ttggaca 4833706  T
Q  479 ccgacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    |||||||||||| |  |||| ||||||||||| |||||||    
T  4833705 ccgacttttcaaacataaattccaattttcattaacccaa 4833666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 288 - 416
Target Start/End: Complemental strand, 26921907 - 26921778
Alignment:
Q  288 catcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctat 387  Q
    ||||||||||||||| | || |||||||| |||||||||||||| |||||||||||||||| | ||||||||||| |||||||||||| |||||| ||||    
T  26921907 catcagattttcaacctacatgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgtcgttttcacctacatgttcctgacacttagcactat 26921808  T
Q  388 cataatctacag-aaaattcaagtttcaac 416  Q
    |||| | ||||| |||||||||||||||||    
T  26921807 catattgtacagaaaaattcaagtttcaac 26921778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 650 - 854
Target Start/End: Original strand, 5616215 - 5616421
Alignment:
Q  650 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgagac 749  Q
    |||||||||||||||| |||||||||||||||||||||||||||| |||| |||| ||||||  |||  ||||||||||||| | |||  || ||||||     
T  5616215 aaggcatttctttattcattttgttttgtttcaaaataataaagttcctaaaataattagtctatttcttggaacattaagtctgactaaatcatgagat 5616314  T
Q  750 cccattaaacataaggaaactattctcaaagtatccgtagtcaa--gctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 847  Q
    ||| ||||||   |||| | |||||| ||||||||||| |||||  | ||||||  ||| |||||||| | |||||||| |||||||||||||| |||||    
T  5616315 cccgttaaactagaggacattattcttaaagtatccgttgtcaaaggttttattatgaattgggatattaataaagcattgagactattatgtatgtaga 5616414  T
Q  848 ctgatga 854  Q
     ||||||    
T  5616415 ttgatga 5616421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 437 - 556
Target Start/End: Complemental strand, 9870740 - 9870631
Alignment:
Q  437 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaatgtaacccaaccccaaaa 536  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||      ||    ||||||||||    
T  9870740 ccaaacctcacataatcccttacttgcaaaaacgtttagacaccgacttttcaagcgaaaatctcaattttcatcaac------ta----aaccccaaaa 9870651  T
Q  537 ctggttctaatcattgtact 556  Q
    ||||||||||||||||||||    
T  9870650 ctggttctaatcattgtact 9870631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 304 - 514
Target Start/End: Original strand, 18230367 - 18230575
Alignment:
Q  304 ttcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaa 403  Q
    ||||||||||||| | |||||  |||   ||||| | |||||||| | ||||||| |||  | | ||||||| |||||| ||||| ||||||||||||||    
T  18230367 ttcacgttttcgcacttaaaatccaatgcgttaacccgttttcgatgtcgttttcgcctaaacgctcctgacacttagctctatcgtaatctacagaaaa 18230466  T
Q  404 -ttcaagtttcaaccacccnnnnnnnntcgatttcca-aacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatccc 501  Q
     ||||||||||||||||||        || ||||||| |||||||||||||| ||||||||||||| |||||||||||||| ||||||||||||||||||    
T  18230467 attcaagtttcaaccacccaaaaa---tcaatttccagaacctcacataatcacttatttgcaaaa-cgtttagacaccgagttttcaagcgaaaatccc 18230562  T
Q  502 aattttcatcaac 514  Q
    |||||||||||||    
T  18230563 aattttcatcaac 18230575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 654 - 855
Target Start/End: Complemental strand, 10677753 - 10677555
Alignment:
Q  654 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgagacccca 753  Q
    ||||| |||||||||||| ||||||||||| | ||||||| ||||| |||| |||||| || ||||||| |||||||||| |||| ||   |||| ||||    
T  10677753 catttttttattgattttcttttgtttcaataaaataaagcccctaaaataattagtctgtataatggagcattaagtatgacttaatcgcgaga-ccca 10677655  T
Q  754 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 853  Q
    ||||||  || || | |||||| |||||||||||||||||||||||  | ||| || |||| |||||||| ||| |||||||||||| ||||||||||||    
T  10677654 ttaaacgaaatgatattattcttaaagtatccgtagtcaagcttta--gtgaaatgagataacattaaagtatatagactattatgtgggtagactgatg 10677557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 654 - 855
Target Start/End: Complemental strand, 10891393 - 10891195
Alignment:
Q  654 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgagacccca 753  Q
    ||||| |||||||||||| ||||||||||| | ||||||| ||||| |||| |||||| || ||||||| |||||||||| |||| ||   |||| ||||    
T  10891393 catttttttattgattttcttttgtttcaataaaataaagcccctaaaataattagtctgtataatggagcattaagtatgacttaatcgcgaga-ccca 10891295  T
Q  754 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 853  Q
    ||||||  || || | |||||| |||||||||||||||||||||||  | ||| || |||| |||||||| ||| |||||||||||| ||||||||||||    
T  10891294 ttaaacgaaatgatattattcttaaagtatccgtagtcaagcttta--gtgaaatgagataacattaaagtatatagactattatgtgggtagactgatg 10891197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 282 - 411
Target Start/End: Complemental strand, 30233332 - 30233202
Alignment:
Q  282 agacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 381  Q
    ||||| || |||||||||||  ||||||||||||| |||||||||||||| ||||||| |||||||| ||||||||||||| ||||||| |||| |||||    
T  30233332 agacagcaccagattttcaatcttcacgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcacctacatgttcttgacacttag 30233233  T
Q  382 ccctatcataatctacag-aaaattcaagtt 411  Q
    ||||||| |||| ||||| ||||||||||||    
T  30233232 ccctatcttaatgtacagaaaaattcaagtt 30233202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 65 - 221
Target Start/End: Complemental strand, 8574765 - 8574608
Alignment:
Q  65 ttcctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaa-catctctagtcggttaggataaagtccctac 163  Q
    ||||||||| |  |||||||||| |||||||||||||||||||||||| ||||| || |||||||||| |||||||||  | |||||||||||| |||||    
T  8574765 ttcctaccctaaagaccaactcatgaactcattagaccctttatacaaggttatctccttcctaaaaaacatctctagatgattaggataaagttcctac 8574666  T
Q  164 acttatgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggtttct 221  Q
    ||||| |||||||| |||||  | |||||||||||| || ||  ||||||||||||||    
T  8574665 acttaagaagaagtctggaaatatttggagtgaagagaattgcatttttaaggtttct 8574608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 654 - 855
Target Start/End: Complemental strand, 5668327 - 5668125
Alignment:
Q  654 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgagacccca 753  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||  ||||||||| |||||||| | | || ||  ||||| ||||    
T  5668327 catttctttgttgattttgttttgtttcaaaataataaagtctctagaataattagtctatttaatggagcattaagtgtgatttaatcgtgaga-ccca 5668229  T
Q  754 ttaaacataaggaaactattctcaaag--tatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactga 851  Q
    |||||   ||||| | |||||| ||||  |||  ||||||||||||||||| |||  | |||| ||||||| ||||||||||||||||| | ||||| ||    
T  5668228 ttaaatgaaaggacattattcttaaagtatatttgtagtcaagctttattgtgaaaagagataacattaaatcatagagactattatgtggatagaccga 5668129  T
Q  852 tgat 855  Q
    ||||    
T  5668128 tgat 5668125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 654 - 855
Target Start/End: Original strand, 35223576 - 35223767
Alignment:
Q  654 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgagacccca 753  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||| |||||||| | |||| ||          |     
T  35223576 catttctttgttgattttgttttgttttaaaataataaagtccctagaataattagtctgtttaatggagcattaagtgtgacttaat----------cg 35223665  T
Q  754 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 853  Q
    | ||||  ||||| | |||||| ||||||| ||||||||||||||||||  ||   ||||| |||||||||||| |||||||||||| ||||||| ||||    
T  35223666 taaaacgaaaggacattattcttaaagtattcgtagtcaagctttattgtaaaaaaggataacattaaagcatatagactattatgtgggtagacggatg 35223765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 283 - 518
Target Start/End: Complemental strand, 2584591 - 2584358
Alignment:
Q  283 gacatcatcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 381  Q
    |||| |||||||||||| ||  ||||||||||||| | |||||  ||||| ||||| |  ||| ||| ||||||||| ||| || | ||||||| |||||    
T  2584591 gacaacatcagattttctaattttcacgttttcgcgcgtaaaatccaaaccgttaacccatttacgatgccgttttcgcctacacgctcctgacacttag 2584492  T
Q  382 ccctatcataatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgatttcca-aacctcacataatcccttatttgcaaaaacgtttagacac 479  Q
    | |||||||||||||||| ||||||||||||||||||||||        |||||||||| |||||||||||||| ||||||||| |||||| || |||||    
T  2584491 ctctatcataatctacagaaaaattcaagtttcaaccaccc---aaaaatcgatttccagaacctcacataatcacttatttgc-aaaacg-ttggacac 2584397  T
Q  480 cgacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    ||||||||||| |  |||| ||||||||||| |||||||    
T  2584396 cgacttttcaaacataaattccaattttcattaacccaa 2584358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 437 - 518
Target Start/End: Original strand, 3338129 - 3338210
Alignment:
Q  437 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    |||||||||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  3338129 ccaaacctcacatagtcccttatttgcaagaatgtttagacaccgacttttcaagcgaaaatcccaattttcatgaacccaa 3338210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 81 - 274
Target Start/End: Complemental strand, 30233599 - 30233406
Alignment:
Q  81 caactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttg 180  Q
    |||| |||| ||||| ||||||||||| |||| |||| ||||||| |||||||| | ||||  | |||||||||||||| || |||||  || |||||||    
T  30233599 caacacaaggactcactagaccctttacacaaggttaattctttcataaaaacacccctagatgattaggataaagtccatatacttagaaataagtttg 30233500  T
Q  181 gaagcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgatttttccag 274  Q
    ||| ||||||||   ||||||| ||  |||||||||||| |||   ||||  ||||| |||||||||| |||||||||||||||||||||||||    
T  30233499 gaaacaattggatcaaagaaaattgcatttttaaggtttttagaaagacaacatcgtggcacgttggtttcccatcgtggcacgatttttccag 30233406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 97 - 270
Target Start/End: Complemental strand, 52266574 - 52266401
Alignment:
Q  97 tagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattggagtga 196  Q
    ||||||||||| |||| |||| || |||| ||||| || | ||||  ||||||||||||||||||||||||| ||| ||||||| || ||||||||  ||    
T  52266574 tagaccctttacacaaggttaattttttcataaaagcacccctagatggttaggataaagtccctacacttaggaataagtttgaaaacaattggatcga 52266475  T
Q  197 agaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgattttt 270  Q
    |||||| ||  |||||||||||||||||   |||  ||||| ||||||||||||||||||||| || |||||||    
T  52266474 agaaaattgcatttttaaggtttctagtaaaacaacatcgtggcacgttggtctcccatcgtgacatgattttt 52266401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 282 - 421
Target Start/End: Complemental strand, 15852179 - 15852039
Alignment:
Q  282 agacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 381  Q
    ||||| ||||||||||||||| ||||| |||| || |||||||||||||  ||||||| |||||||| ||||||||||||| ||||||| |||| |||||    
T  15852179 agacagcatcagattttcaaccttcacatttttgcgcataaaaatcaaattgttaatccgttttcgatgccgttttcacctacatgttcatgacacttag 15852080  T
Q  382 ccctatcataatctaca-gaaaattcaagtttcaaccaccc 421  Q
    ||||||| |||| ||||  |||| |||||||||||| ||||    
T  15852079 ccctatcttaatgtacataaaaaatcaagtttcaacaaccc 15852039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 282 - 518
Target Start/End: Original strand, 13447134 - 13447368
Alignment:
Q  282 agacatcatcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactctta 380  Q
    ||||| |||||||||||| ||  ||||||||||||| | |||||  ||||| ||||| |  |||| || ||||||||| ||| || | ||||||| ||||    
T  13447134 agacaacatcagattttctaattttcacgttttcgcgcgtaaaatccaaactgttaacccatttttgatgccgttttcgcctacacgctcctgacactta 13447233  T
Q  381 gccctatcataatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgatttc-caaacctcacataatcccttatttgcaaaaacgtttagaca 478  Q
     | |||||||||||||||| ||||||||||||||||||||||        ||||||||  ||||||||||||||| ||||||||  |||||| |||||||    
T  13447234 tctctatcataatctacagaaaaattcaagtttcaaccaccc---aaaaatcgatttctaaaacctcacataatcgcttatttg-taaaacg-ttagaca 13447328  T
Q  479 ccgacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
     ||||| |||||| ||||||| |||||||||| |||||||    
T  13447329 tcgactcttcaagggaaaatctcaattttcattaacccaa 13447368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 101 - 223
Target Start/End: Complemental strand, 7133040 - 7132918
Alignment:
Q  101 ccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaa 200  Q
    ||||| |||| ||| |||||||| | |||||||||| ||||  | ||||||||||||||||||||||| ||||||||||||||| |||||||   |||||    
T  7133040 cccttaatacgaagctatttcttccataaaaacatccctagatgattaggataaagtccctacacttaggaagaagtttggaagtaattggatcaaagaa 7132941  T
Q  201 aaatgtctttttaaggtttctag 223  Q
    || ||  ||||||||||||||||    
T  7132940 aattgcatttttaaggtttctag 7132918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 556 - 612
Target Start/End: Original strand, 5713856 - 5713912
Alignment:
Q  556 tgtttgaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5713856 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 5713912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 556 - 612
Target Start/End: Complemental strand, 19927059 - 19927003
Alignment:
Q  556 tgtttgaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19927059 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 19927003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 556 - 612
Target Start/End: Original strand, 26963548 - 26963604
Alignment:
Q  556 tgtttgaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26963548 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 26963604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 556 - 612
Target Start/End: Original strand, 26970371 - 26970427
Alignment:
Q  556 tgtttgaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26970371 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 26970427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 307 - 418
Target Start/End: Complemental strand, 7132704 - 7132593
Alignment:
Q  307 acgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattc 406  Q
    |||||||||| |||||||||||||| ||||||| ||||||||  |||||||| ||| |||| |||| || ||| || ||||||||||||||| ||| |||    
T  7132704 acgttttcgcgcataaaaatcaaaccgttaatccgttttcgataccgttttcgcctacatgctcctaacacttggcactatcataatctacaaaaatttc 7132605  T
Q  407 aagtttcaacca 418  Q
    | ||||||||||    
T  7132604 atgtttcaacca 7132593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 307 - 418
Target Start/End: Original strand, 20000340 - 20000451
Alignment:
Q  307 acgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattc 406  Q
    |||||||||| |||||||||||||| ||||||| |||||||| ||||||||| ||| |||| |||| || ||| || |||||||||| |||| ||| |||    
T  20000340 acgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcgcctacatgctcctaacacttggcactatcataatttacaaaaatttc 20000439  T
Q  407 aagtttcaacca 418  Q
    | ||||||||||    
T  20000440 atgtttcaacca 20000451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 553 - 612
Target Start/End: Original strand, 55612591 - 55612650
Alignment:
Q  553 tactgtttgaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  55612591 tactgttagaataagccctaataaccaatctatattgattgggtttggctttgtatcatg 55612650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 101 - 219
Target Start/End: Complemental strand, 15273350 - 15273232
Alignment:
Q  101 ccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaa 200  Q
    ||||| |||||||| || ||||||| |||||||| | ||||  | ||||||||||||||||||||||| |||||||||||||| ||||| ||| ||||||    
T  15273350 cccttaatacaaagctaattctttcataaaaacacccctagatgattaggataaagtccctacacttaggaagaagtttggaaccaattagagcgaagaa 15273251  T
Q  201 aaatgtctttttaaggttt 219  Q
    || ||  ||||| ||||||    
T  15273250 aattgcatttttgaggttt 15273232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 101 - 223
Target Start/End: Original strand, 19999984 - 20000106
Alignment:
Q  101 ccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaa 200  Q
    ||||| |||||||| |||||||| | |||||||||| ||||    ||| ||||||||||||||||||| ||||||||||||||| |||||||   |||||    
T  19999984 cccttaatacaaagctatttcttccataaaaacatccctagataattatgataaagtccctacacttaggaagaagtttggaagtaattggatcaaagaa 20000083  T
Q  201 aaatgtctttttaaggtttctag 223  Q
    || ||  ||||||||||||||||    
T  20000084 aattgcatttttaaggtttctag 20000106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 555 - 612
Target Start/End: Original strand, 5707227 - 5707284
Alignment:
Q  555 ctgtttgaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  5707227 ctgttggaataagccctaatagccaatctatattgattgtgtttggctttgtatcatg 5707284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 311 - 415
Target Start/End: Complemental strand, 5683164 - 5683060
Alignment:
Q  311 tttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattcaagt 410  Q
    |||||| ||||||| |||||| ||||||| | ||| |||||||||||| ||| || | ||||||| |||||| ||||||||||||||||||| |||| ||    
T  5683164 tttcgcgcataaaattcaaaccgttaatcggattttgacgccgttttcgcctacacgctcctgacacttagctctatcataatctacagaaatttcatgt 5683065  T
Q  411 ttcaa 415  Q
    |||||    
T  5683064 ttcaa 5683060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 556 - 612
Target Start/End: Complemental strand, 10621632 - 10621576
Alignment:
Q  556 tgtttgaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  10621632 tgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 10621576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 556 - 612
Target Start/End: Original strand, 12357044 - 12357100
Alignment:
Q  556 tgtttgaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  12357044 tgttggaataagccctaatagccaatctatattgattggatttggctttgtatcatg 12357100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 561 - 612
Target Start/End: Original strand, 868510 - 868561
Alignment:
Q  561 gaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  868510 gaataaaccctaatagccaatctatattgattgggtttggctttgtatcatg 868561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 556 - 612
Target Start/End: Complemental strand, 10628711 - 10628655
Alignment:
Q  556 tgtttgaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    |||| |||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  10628711 tgttggaataagccctaatagccaatctatattgattggttttgactttgtatcatg 10628655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 556 - 612
Target Start/End: Complemental strand, 17142428 - 17142372
Alignment:
Q  556 tgtttgaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    |||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  17142428 tgttggaaaaagccctaatagccaatctatattgattgggtttgactttgtatcatg 17142372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 554 - 610
Target Start/End: Complemental strand, 28393436 - 28393380
Alignment:
Q  554 actgtttgaataagccctaatagccaatctatattgattgggtttggctttgtatca 610  Q
    |||||| || |||||||||||||||||||||||||||||||||||| ||||||||||    
T  28393436 actgttggagtaagccctaatagccaatctatattgattgggtttgactttgtatca 28393380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 292 - 416
Target Start/End: Original strand, 16157410 - 16157535
Alignment:
Q  292 agattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcata 391  Q
    |||||||| || ||||||||||||| |||||||| ||||| ||||| | |||||||| ||||||||| ||| || | || |||  | |||| ||||||||    
T  16157410 agattttcgaccttcacgttttcgcgcataaaaaccaaaccgttaacccgttttcgatgccgttttcgcctacacgctcatgagacatagcactatcata 16157509  T
Q  392 atctacag-aaaattcaagtttcaac 416  Q
    |||||| | |||| ||||||||||||    
T  16157510 atctaccgaaaaactcaagtttcaac 16157535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 564 - 612
Target Start/End: Complemental strand, 4426895 - 4426847
Alignment:
Q  564 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||    
T  4426895 taagtcctaatagccaatctatattgattgggtttggctctgtatcatg 4426847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 556 - 612
Target Start/End: Original strand, 18268976 - 18269032
Alignment:
Q  556 tgtttgaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    |||| |||||||||| |||||||||||||| |||| |||||||||||||||||||||    
T  18268976 tgttggaataagcccaaatagccaatctatgttgaatgggtttggctttgtatcatg 18269032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 697 - 764
Target Start/End: Complemental strand, 39074346 - 39074278
Alignment:
Q  697 ctagaatagttagtccgtttaa-tggaacattaagtataactttattatgagaccccattaaacataag 764  Q
    |||||||| ||||||||||||| | ||||||||||||| |||| || ||||||||||||||||||||||    
T  39074346 ctagaataattagtccgtttaaattgaacattaagtatgacttaatcatgagaccccattaaacataag 39074278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 674 - 855
Target Start/End: Complemental strand, 21454319 - 21454137
Alignment:
Q  674 tttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaag-tataactttattatgagaccccattaaacataaggaaactat 772  Q
    ||||||||||| ||||||||| | |||||||||||||  | |||||||||||||||  | | |||| ||  ||||||||||||||  |||| || | |||    
T  21454319 tttgtttcaaagtaataaagttcttagaatagttagtttgattaatggaacattaaaatgtgacttaatattgagaccccattaattataatgacattat 21454220  T
Q  773 tctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 855  Q
    | | ||| ||||  ||||||| |||||||| ||| || |||| || ||| ||||| ||| ||||||||  ||||| |||||||    
T  21454219 ttttaaaatatctatagtcaaactttattgtgaaatgagataacaataatgcataaagattattatgtgagtagattgatgat 21454137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 282 - 347
Target Start/End: Complemental strand, 15273124 - 15273059
Alignment:
Q  282 agacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcg 347  Q
    ||||| ||||||||||||||| |  |||||||||| |||||||||||||| ||||||| |||||||    
T  15273124 agacaacatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatccgttttcg 15273059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 85 - 134
Target Start/End: Original strand, 15370266 - 15370315
Alignment:
Q  85 tcaagaactcattagaccctttatacaaagttatttctttcctaaaaaca 134  Q
    |||| |||||||||||||||||||||||  ||||||||||||||||||||    
T  15370266 tcaacaactcattagaccctttatacaactttatttctttcctaaaaaca 15370315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 563 - 612
Target Start/End: Original strand, 55992680 - 55992729
Alignment:
Q  563 ataagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    ||||||||||||||||||| | ||||||||||||||| ||||||||||||    
T  55992680 ataagccctaatagccaatttgtattgattgggtttgactttgtatcatg 55992729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 318 - 418
Target Start/End: Complemental strand, 54363891 - 54363791
Alignment:
Q  318 cataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattcaagtttcaacc 417  Q
    ||||||| |||||| ||||||  | ||| || ||||||||| ||| || | || |||| |||||| ||||||||||||| ||||| ||||||||||||||    
T  54363891 cataaaattcaaaccgttaattggattttgatgccgttttcgcctacacgctcgtgacacttagctctatcataatctatagaaatttcaagtttcaacc 54363792  T
Q  418 a 418  Q
    |    
T  54363791 a 54363791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 311 - 418
Target Start/End: Complemental strand, 15214226 - 15214119
Alignment:
Q  311 tttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattcaagt 410  Q
    |||||| | ||||| |||||| ||||||| | ||| || ||||||||| ||| || | ||||||| ||| || ||||||||||||||||| | |||||||    
T  15214226 tttcgcgcgtaaaattcaaaccgttaatcggattttgatgccgttttcgcctacacgctcctgacacttggctctatcataatctacagatatttcaagt 15214127  T
Q  411 ttcaacca 418  Q
    | ||||||    
T  15214126 tacaacca 15214119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 437 - 511
Target Start/End: Original strand, 15991026 - 15991099
Alignment:
Q  437 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatc 511  Q
    ||||||||||||||||| ||||||||| |||||||||| ||  ||||||||||| |||||   ||||||||||||    
T  15991026 ccaaacctcacataatctcttatttgc-aaaacgtttatacttcgacttttcaaacgaaacctccaattttcatc 15991099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 571 - 612
Target Start/End: Complemental strand, 5668412 - 5668371
Alignment:
Q  571 taatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    ||||||||||||||||||||||| |||||| |||||||||||    
T  5668412 taatagccaatctatattgattgtgtttggttttgtatcatg 5668371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 283 - 348
Target Start/End: Complemental strand, 8574381 - 8574316
Alignment:
Q  283 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcga 348  Q
    |||| ||||||||||||| | ||||||||||||| | |||||||||||| ||||| | ||||||||    
T  8574381 gacagcatcagattttcacccttcacgttttcgcgcctaaaaatcaaaccgttaacccgttttcga 8574316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 564 - 612
Target Start/End: Original strand, 8845118 - 8845166
Alignment:
Q  564 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    |||| ||||||||||||||||| ||||||| ||||| ||||||||||||    
T  8845118 taagtcctaatagccaatctatgttgattgagtttgactttgtatcatg 8845166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 564 - 612
Target Start/End: Original strand, 8858082 - 8858130
Alignment:
Q  564 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    |||| ||||||||||||||||| ||||||| ||||| ||||||||||||    
T  8858082 taagtcctaatagccaatctatgttgattgagtttgactttgtatcatg 8858130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 572 - 612
Target Start/End: Original strand, 18262136 - 18262176
Alignment:
Q  572 aatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    |||||||||||||| |||| |||||||||||||||||||||    
T  18262136 aatagccaatctatgttgaatgggtttggctttgtatcatg 18262176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 785 - 837
Target Start/End: Complemental strand, 39074270 - 39074218
Alignment:
Q  785 cgtagtcaagctttattgagaagtgggatatcattaaagcatagagactatta 837  Q
    ||||||||  |||||||| |||||| |||||||||||||||| ||||||||||    
T  39074270 cgtagtcatactttattgtgaagtgagatatcattaaagcatggagactatta 39074218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 686 - 854
Target Start/End: Complemental strand, 30040919 - 30040750
Alignment:
Q  686 taataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgagaccccattaaacataaggaa-actattctcaaa-gtat 783  Q
    ||||||||| |||||||||| |||| ||| |||| | | ||||||| | |||| || ||||||   |||||| ||||| ||| |||||||| ||| ||||    
T  30040919 taataaagttcctagaatagatagttcgtgtaatagtatattaagtgtgacttaatcatgagattacattaa-cataaagaacactattcttaaatgtat 30040821  T
Q  784 ccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatga 854  Q
    |  ||||||||| ||| |  ||| |||||||  | |||||||| ||||||||||||||  |||||||||||    
T  30040820 ctatagtcaagcgttaatatgaattgggataataataaagcatcgagactattatgtatatagactgatga 30040750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 320 - 418
Target Start/End: Complemental strand, 45314498 - 45314400
Alignment:
Q  320 taaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattcaagtttcaacca 418  Q
    ||||| |||||| ||||||| | ||| || | ||||||| ||| || | ||||||  |||| | ||||||||||||||||||| ||||||| |||||||    
T  45314498 taaaattcaaaccgttaatcggattttgatgtcgttttcgcctacacgatcctgatacttaactctatcataatctacagaaatttcaagtctcaacca 45314400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #102
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 437 - 518
Target Start/End: Original strand, 10705491 - 10705572
Alignment:
Q  437 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    ||||||||| ||||||| ||| |||| |||||||||||| | | ||||||||||||  |||  ||||||| |||| ||||||    
T  10705491 ccaaacctcccataatctcttgtttggaaaaacgtttagcctctgacttttcaagcataaactccaatttccatcgacccaa 10705572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #103
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 437 - 518
Target Start/End: Original strand, 10919261 - 10919342
Alignment:
Q  437 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    ||||||||| ||||||| ||| |||| |||||||||||| | | ||||||||||||  |||  ||||||| |||| ||||||    
T  10919261 ccaaacctcccataatctcttgtttggaaaaacgtttagcctctgacttttcaagcataaactccaatttccatcgacccaa 10919342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #104
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 571 - 612
Target Start/End: Original strand, 20311220 - 20311261
Alignment:
Q  571 taatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    ||||||||||||| |||| ||||| |||||||||||||||||    
T  20311220 taatagccaatctgtattcattggatttggctttgtatcatg 20311261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #105
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 778 - 847
Target Start/End: Original strand, 56516186 - 56516255
Alignment:
Q  778 aagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 847  Q
    |||||||  |||||||||||||||| |||    ||||  |||||| ||||||||||||||||||||||||    
T  56516186 aagtatctatagtcaagctttattgtgaataacgatagtattaaaacatagagactattatgtaggtaga 56516255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 206; Significance: 1e-112; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 56 - 511
Target Start/End: Original strand, 3271 - 3724
Alignment:
Q  56 caactttctttcctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaa 155  Q
    |||||| | ||||||||||| ||||||||||| |||||||||||||||||||||| |  |||||||||||||||||||||||||||  ||||||||||||    
T  3271 caacttccattcctaccccaaggaccaactcatgaactcattagaccctttatacgacattatttctttcctaaaaacatctctagatggttaggataaa 3370  T
Q  156 gtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccat 255  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| ||  |||||||||||||| |  |||||||||||| |||||||||||| | ||    
T  3371 gtccctacacttaggaagaagtttggaagcaattggagtgaagaaaattgcatttttaaggtttcttggatgacagaatcgtggcacgttggtcttctat 3470  T
Q  256 cgtggcacgatttttccagcatctctagacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgtt 355  Q
    |||||||||||||||||||  ||   ||||  | ||||||||| ||| ||||||||||||| |||||||||||||| ||||| |  ||||||| ||||||    
T  3471 cgtggcacgatttttccagattcgacagacgacttcagattttaaaccttcacgttttcgcacataaaaatcaaaccgttaacccattttcgatgccgtt 3570  T
Q  356 ttcacctgcatgttcctgactcttagccctatcataatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgatttccaaacctcacataatcc 454  Q
    ||| |||  | | ||||||| |||||| |||||||||||||||| ||||||||||||||||||||||        | |  |   |||||||||| ||||     
T  3571 ttcgcctaaacgctcctgacacttagctctatcataatctacagaaaaattcaagtttcaaccacccaaaaatcgttg--tataaaacctcacacaatca 3668  T
Q  455 cttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatc 511  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||    
T  3669 cttatttgc-aaaacgtttagacaccgacttttcaaacgaaaatcccaatttacatc 3724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 200; Significance: 1e-108; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 200; E-Value: 1e-108
Query Start/End: Original strand, 90 - 518
Target Start/End: Original strand, 4119 - 4542
Alignment:
Q  90 aactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaatt 189  Q
    ||||||| |||| |||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||| ||||||||||| ||    
T  4119 aactcatcagacgctttatacaacgttatttctttcctaaaaacatctctagatggttaggataaagtccctacacttaggaagatgtttggaagcattt 4218  T
Q  190 ggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgatttttccagcatctctagacatca 289  Q
    ||||||||||||| ||  ||||||| |||||| | ||||||||||||| ||| ||||||||||||||||||||||||||||||||  ||   ||||  |     
T  4219 ggagtgaagaaaattgcatttttaacgtttcttgggtgacagaatcgtggcaagttggtctcccatcgtggcacgatttttccagattcgacagacgact 4318  T
Q  290 tcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatca 389  Q
    ||||||||||||| ||||||||||||| |||||||||||||| ||||| | |||||| | ||||||||  |||  | |   ||||| |||||| ||||||    
T  4319 tcagattttcaaccttcacgttttcgcacataaaaatcaaactgttaacccgttttcaatgccgtttttgcctaaacg---ctgacacttagctctatca 4415  T
Q  390 taatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgatttcc-aaacctcacataatcccttatttgcaaaaacgtttagacaccgactttt 487  Q
    |||||||||| ||||||||||||||||||||||        ||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  4416 taatctacagaaaaattcaagtttcaaccaccc---aaaaatcgatttccaaaacctcacataatcgcttatttgc-aaaacgtttagacaccgactttt 4511  T
Q  488 caagcgaaaatcccaattttcatcaacccaa 518  Q
    |||| |||||||||||||||||| |||||||    
T  4512 caagggaaaatcccaattttcattaacccaa 4542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 200; Significance: 1e-108; HSPs: 5)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 200; E-Value: 1e-108
Query Start/End: Original strand, 648 - 855
Target Start/End: Complemental strand, 2528 - 2321
Alignment:
Q  648 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgag 747  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  2528 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 2429  T
Q  748 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 847  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2428 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 2329  T
Q  848 ctgatgat 855  Q
    ||||||||    
T  2328 ctgatgat 2321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #2
Raw Score: 200; E-Value: 1e-108
Query Start/End: Original strand, 648 - 855
Target Start/End: Complemental strand, 11419 - 11212
Alignment:
Q  648 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgag 747  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  11419 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 11320  T
Q  748 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 847  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11319 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 11220  T
Q  848 ctgatgat 855  Q
    ||||||||    
T  11219 ctgatgat 11212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #3
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 556 - 612
Target Start/End: Complemental strand, 2620 - 2564
Alignment:
Q  556 tgtttgaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2620 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 2564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #4
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 556 - 612
Target Start/End: Complemental strand, 11511 - 11455
Alignment:
Q  556 tgtttgaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11511 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 11455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #5
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 205
Target Start/End: Complemental strand, 18453 - 18357
Alignment:
Q  109 acaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatg 205  Q
    |||| |||| ||||||| |||||||| | ||||  | |||||||||||||| ||||||||  || |||||||||| ||||| |  ||||||||||||    
T  18453 acaaggttaattctttcgtaaaaacacccctagatgattaggataaagtccttacacttaaaaataagtttggaaacaatttggttgaagaaaaatg 18357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 199; Significance: 1e-108; HSPs: 3)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 77 - 556
Target Start/End: Complemental strand, 1165 - 695
Alignment:
Q  77 ggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaag 176  Q
    ||||||||||| |||||||||||||| || |||||| |||||||| |||||||||||||||||||  ||||||||||||||||||||||||| |||||||    
T  1165 ggaccaactcatgaactcattagaccatt-atacaaggttatttccttcctaaaaacatctctagatggttaggataaagtccctacacttaggaagaag 1067  T
Q  177 tttggaagcaattggagtgaagaaaaatg-tctttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgatttttccagc 275  Q
    |||||| ||| |||||| |||||||| ||   |||||||||||| | || |||||  ||||| ||||||||||||||||||||||||||||||||||||     
T  1066 tttggaggcatttggagcgaagaaaattgcattttttaaggtttttggtatgacatcatcgtggcacgttggtctcccatcgtggcacgatttttccaga 967  T
Q  276 atctctagacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgac 375  Q
     |    ||||  | ||||||||||||| ||||||||||||  |||||||| ||||| ||||| | |||||||| ||||||||| ||| ||   |||||||    
T  966 tttgacagacgacttcagattttcaaccttcacgttttcgtgcataaaaaccaaaccgttaacccgttttcgatgccgttttcgcctacacactcctgac 867  T
Q  376 tcttagccctatcataatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgatttccaaacctcacataatcccttatttgcaaaaacgttta 474  Q
     |||||| |||||||||||||||| |||||| |||||||||||| ||        |||||||||||||||||||| ||  ||||||||||||||||||||    
T  866 acttagctctatcataatctacagaaaaattaaagtttcaaccatccaaaaaaaatcgatttccaaacctcacatgatatcttatttgcaaaaacgttta 767  T
Q  475 gacaccgacttttcaagcgaaaatcccaattttcatcaacccaatgtaacccaaccccaaaactggttctaatcattgtact 556  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||          |||||||||||||||||||||||||||    
T  766 gacactgacttttcaagcgaaaatcccaattttcatcatcccaat----------cccaaaactggttctaatcattgtact 695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 152; E-Value: 5e-80
Query Start/End: Original strand, 77 - 403
Target Start/End: Complemental strand, 7916 - 7589
Alignment:
Q  77 ggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaag 176  Q
    ||||||||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||||  ||||||||||||||||||||||||| |||||||    
T  7916 ggaccaactcatgaactcattagaccctttatacaaggttatttccttcctaaaaacatctctagatggttaggataaagtccctacacttaggaagaag 7817  T
Q  177 tttggaagcaattggagtgaagaaaaatg-tctttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgatttttccagc 275  Q
    |||||| ||| |||||| |||||||| ||   |||||||||||| | || |||||  ||||| ||||||||||||||||||||||||||||||||||||     
T  7816 tttggaggcatttggagcgaagaaaattgcattttttaaggtttttggtatgacatcatcgtggcacgttggtctcccatcgtggcacgatttttccaga 7717  T
Q  276 atctctagacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgac 375  Q
     |    ||||  | ||||||||||||| ||||||||||||  |||||||| ||||| ||||| | |||||||| ||||||||| ||| ||   |||||||    
T  7716 tttgacagacgacttcagattttcaaccttcacgttttcgtgcataaaaaccaaaccgttaacccgttttcgatgccgttttcgcctacacactcctgac 7617  T
Q  376 tcttagccctatcataatctacagaaaa 403  Q
     |||||| ||||||||||||||||||||    
T  7616 acttagctctatcataatctacagaaaa 7589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 311 - 418
Target Start/End: Original strand, 26374 - 26480
Alignment:
Q  311 tttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattcaagt 410  Q
    |||||| | ||||| |||||| |||||||   ||| || ||||||||| ||| || | ||||||| |||| | |||||||||||||||| ||||||||||    
T  26374 tttcgcgcgtaaaattcaaaccgttaatcgaattttgatgccgttttcgcctacacgctcctgacacttaactctatcataatctacag-aaattcaagt 26472  T
Q  411 ttcaacca 418  Q
     |||||||    
T  26473 ctcaacca 26480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390 (Bit Score: 192; Significance: 1e-104; HSPs: 4)
Name: scaffold0390
Description:

Target: scaffold0390; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 648 - 855
Target Start/End: Complemental strand, 7141 - 6934
Alignment:
Q  648 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgag 747  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | ||||    
T  7141 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaactgtgag 7042  T
Q  748 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 847  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7041 accctattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 6942  T
Q  848 ctgatgat 855  Q
    ||||||||    
T  6941 ctgatgat 6934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #2
Raw Score: 184; E-Value: 4e-99
Query Start/End: Original strand, 648 - 855
Target Start/End: Complemental strand, 14157 - 13950
Alignment:
Q  648 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgag 747  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | | ||||    
T  14157 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctacaatagttagtccgtttaatggaacattaagtataacttaactgtgag 14058  T
Q  748 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 847  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  14057 accccattaaacataaggaaactattctcaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtaggtaga 13958  T
Q  848 ctgatgat 855  Q
    ||||||||    
T  13957 ctgatgat 13950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 554 - 612
Target Start/End: Complemental strand, 14251 - 14193
Alignment:
Q  554 actgtttgaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  14251 actgttggaataagccctaatagccaatctatattgattgagtttggttttgtatcatg 14193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 556 - 612
Target Start/End: Complemental strand, 7233 - 7177
Alignment:
Q  556 tgtttgaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    |||| ||||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  7233 tgttggaataagccctaatagccaatctatattgattgagtttggttttgtatcatg 7177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 29 - 511
Target Start/End: Original strand, 3228 - 3711
Alignment:
Q  29 ctctctgaaacacaatataatcctcaacaactttctttcctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttccta 128  Q
    ||||||||| | || ||||||| | |||||||| | |||| |||||| ||||||||||| |||||||||||||||||||||||| ||| |||| ||||||    
T  3228 ctctctgaacctcattataatcattaacaacttccattccaaccccaaggaccaactcatgaactcattagaccctttatacaaggttttttcattccta 3327  T
Q  129 aaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggtttctagtgtga 228  Q
    |||||||||||||  ||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||| ||  |||||||||||||| || |||    
T  3328 aaaacatctctagatggttaggataaagtccctacacttaggaagaagtttgaaagcatttggagtgaagaaaattgcatttttaaggtttctggtatga 3427  T
Q  229 cagaatcgtagcacgttggtctcccatcgtggcacgatttttccagcatctctagacatcatcagattttcaacattcacgttttcgctcataaaaatca 328  Q
    ||  ||||| |||||||| ||| |||||||||||||||||||||||  |    ||||  | |||| |||| ||| |||| ||||||||  ||||||| ||    
T  3428 catcatcgtggcacgttgatctaccatcgtggcacgatttttccagatttgacagacgacttcaggtttttaaccttcatgttttcgcgtataaaaacca 3527  T
Q  329 aacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaa-attcaagtttcaaccacccnnnnnn 427  Q
    ||  ||||| | |||||||| ||||||||| ||| || | ||||||| |||||| ||||||||||| | ||||| |||||||||||||| ||||          
T  3528 aatcgttaacccgttttcgatgccgttttcgcctacacgctcctgacacttagctctatcataatcaaaagaaatattcaagtttcaactacccaaaaaa 3627  T
Q  428 nntcgattt-ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatc 511  Q
      ||||||| ||||||||||||| ||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||    
T  3628 aatcgatttcccaaacctcacatgatctcttatttgc-aaaacgtttagacaccgacttttcaaacgaaaatcccaatttccatc 3711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 188; Significance: 1e-101; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 648 - 855
Target Start/End: Original strand, 18288 - 18495
Alignment:
Q  648 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgag 747  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||| ||||    
T  18288 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaattgaacattaagtataacttaattgtgag 18387  T
Q  748 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 847  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18388 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 18487  T
Q  848 ctgatgat 855  Q
    ||||||||    
T  18488 ctgatgat 18495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 555 - 612
Target Start/End: Original strand, 18195 - 18252
Alignment:
Q  555 ctgtttgaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18195 ctgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 18252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0433 (Bit Score: 184; Significance: 4e-99; HSPs: 2)
Name: scaffold0433
Description:

Target: scaffold0433; HSP #1
Raw Score: 184; E-Value: 4e-99
Query Start/End: Original strand, 648 - 855
Target Start/End: Original strand, 7107 - 7314
Alignment:
Q  648 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgag 747  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||||    
T  7107 acaaggtatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatagaacattaagtataacttaattgtgag 7206  T
Q  748 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 847  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7207 accccattaaacataatgaaactattctaaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 7306  T
Q  848 ctgatgat 855  Q
    ||||||||    
T  7307 ctgatgat 7314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0433; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 556 - 612
Target Start/End: Original strand, 7015 - 7071
Alignment:
Q  556 tgtttgaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  7015 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 7071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0657 (Bit Score: 180; Significance: 1e-96; HSPs: 2)
Name: scaffold0657
Description:

Target: scaffold0657; HSP #1
Raw Score: 180; E-Value: 1e-96
Query Start/End: Original strand, 648 - 855
Target Start/End: Original strand, 993 - 1200
Alignment:
Q  648 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgag 747  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||| ||||    
T  993 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctaaaatagttagtccgtttaatgaaacattaagtataacttaattgtgag 1092  T
Q  748 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 847  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1093 accccattaaacataaagaaactattctcaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 1192  T
Q  848 ctgatgat 855  Q
    ||||||||    
T  1193 ctgatgat 1200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0657; HSP #2
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 556 - 612
Target Start/End: Original strand, 901 - 957
Alignment:
Q  556 tgtttgaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  901 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 176; Significance: 2e-94; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 85 - 511
Target Start/End: Complemental strand, 17891 - 17468
Alignment:
Q  85 tcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaag 184  Q
    |||| ||||||||| ||||||||||||| ||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  17891 tcaacaactcattaaaccctttatacaacgttatttatttcctaaaaacatctctagatggttaggataaagtccctacacttatgaagaagtttggaag 17792  T
Q  185 caattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgatttttccagcatctctaga 284  Q
    || ||||||||||||||| ||  |||||||||||||| || | |||  ||||| |||||||||||||||||||||||||||| |||||||  |    |||    
T  17791 catttggagtgaagaaaattgcatttttaaggtttctggtataacatcatcgtggcacgttggtctcccatcgtggcacgatgtttccagatttgacaga 17692  T
Q  285 catcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccc 384  Q
    |  | ||||||||||||| ||||||||||||  |||||||||||||| ||||| | |||||||| ||||||||| ||| || | |||| ||  |||||||    
T  17691 cgacttcagattttcaaccttcacgttttcgaacataaaaatcaaaccgttaacccgttttcgatgccgttttcgcctacacgctcctaac-attagccc 17593  T
Q  385 tatcataatctacagaaa-attcaagtttcaaccacccnnnnnnnntcgattt-ccaaacctcacataatcccttatttgcaaaaacgtttagacaccga 482  Q
    |||||||||||||| ||| |||||||||||||||||||        ||||||| ||||||||||||||||| ||||||| | ||||||||| |||||| |    
T  17592 tatcataatctacaaaaagattcaagtttcaaccaccc---aataatcgatttcccaaacctcacataatctcttattt-ccaaaacgttttgacaccaa 17497  T
Q  483 cttttcaagcgaaaatcccaattttcatc 511  Q
    || ||||| |||||||||| |||| ||||    
T  17496 ctattcaaacgaaaatccctatttccatc 17468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 176; Significance: 2e-94; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 648 - 855
Target Start/End: Complemental strand, 26197 - 25990
Alignment:
Q  648 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgag 747  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||| ||| ||||    
T  26197 acaagacatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccatttaatggaacattaaatataacttaattgtgag 26098  T
Q  748 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 847  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  26097 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgaaaagtgggatatcattaaagcatagcgactattatgtaggtaga 25998  T
Q  848 ctgatgat 855  Q
    ||||||||    
T  25997 ctgatgat 25990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186; HSP #2
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 556 - 611
Target Start/End: Complemental strand, 26286 - 26231
Alignment:
Q  556 tgtttgaataagccctaatagccaatctatattgattgggtttggctttgtatcat 611  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  26286 tgttggaataagccctaatagtcaatctatattgattgggtttggctttgtatcat 26231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0962 (Bit Score: 168; Significance: 1e-89; HSPs: 1)
Name: scaffold0962
Description:

Target: scaffold0962; HSP #1
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 78 - 518
Target Start/End: Complemental strand, 1265 - 825
Alignment:
Q  78 gaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagt 177  Q
    |||||||||| |||||||||||||||||||||||| |||||||| ||||||||||||||| |||  ||||||||||||||||||||||||| || |||||    
T  1265 gaccaactcatgaactcattagaccctttatacaaggttatttccttcctaaaaacatctgtagatggttaggataaagtccctacacttaggaggaagt 1166  T
Q  178 ttggaagcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgatttttccagcat 277  Q
     |||||||| ||||||||||||||| ||  |||||||||||||| || |||||  ||||| ||||||||||||||||||||||||| |||||||||| ||    
T  1165 ctggaagcatttggagtgaagaaaattgcatttttaaggtttctggtatgacatcatcgtggcacgttggtctcccatcgtggcacaatttttccagaat 1066  T
Q  278 c-tctagacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgact 376  Q
    |    ||||| ||||| ||||   || |||||||||||||  ||||||| ||||| ||||| | |||||||| ||||||||| ||| ||   |||||||     
T  1065 cggacagacaacatcaaatttcataccttcacgttttcgcgaataaaaaccaaaccgttaacccgttttcgatgccgttttcgcctacacactcctgaca 966  T
Q  377 cttagccctatcataatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgattt-ccaaacctcacataatcccttatttgcaaaaacgttta 474  Q
    |||||| |||||||||||||||| ||||||||||||||||||| |         || |||| ||||||||||||||||| ||| ||||||||||||||||    
T  965 cttagctctatcataatctacagaaaaattcaagtttcaaccaac---taaaaatctatttcccaaacctcacataatctcttgtttgcaaaaacgttta 869  T
Q  475 gacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    ||| || ||||||||| |  |||| ||||||| |||| ||||||    
T  868 gactccaacttttcaaacataaattccaatttccatcgacccaa 825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 162; Significance: 5e-86; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 162; E-Value: 5e-86
Query Start/End: Original strand, 650 - 855
Target Start/End: Original strand, 5531 - 5736
Alignment:
Q  650 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgagac 749  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  5531 aaggcatttctttattgatttatttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 5630  T
Q  750 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 849  Q
    ||| ||||||||||||||| |||||| |||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  5631 cccgttaaacataaggaaattattcttaaagtatatgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtgggtagact 5730  T
Q  850 gatgat 855  Q
    ||||||    
T  5731 gatgat 5736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 564 - 612
Target Start/End: Original strand, 5444 - 5492
Alignment:
Q  564 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  5444 taagccctaatagccaatctatattgtttgggtttggctttgtatcatg 5492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 162; Significance: 5e-86; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 162; E-Value: 5e-86
Query Start/End: Original strand, 19 - 232
Target Start/End: Complemental strand, 47262 - 47049
Alignment:
Q  19 ttaattcaggctctctgaaacacaatataatcctcaacaactttctttcctaccccagggaccaactcaagaactcattagaccctttatacaaagttat 118  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  47262 ttaattcaggctctctgaaacacaatataatcatcaacaactttctttcctaccccaaggaccaactcaagaactcattagaccctttatacaaagttat 47163  T
Q  119 ttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggtt 218  Q
    ||||||| |||||||||||||||  ||||||||||||||| ||||||||| ||| |||| ||||||||||| |||||||||||| ||  |||||||||||    
T  47162 ttctttcataaaaacatctctagatggttaggataaagtctctacacttaggaaaaagtatggaagcaattagagtgaagaaaattgcatttttaaggtt 47063  T
Q  219 tctagtgtgacaga 232  Q
    ||||||||||||||    
T  47062 tctagtgtgacaga 47049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 437 - 511
Target Start/End: Original strand, 51966 - 52039
Alignment:
Q  437 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatc 511  Q
    ||||||||||||||||| ||||||||| |||||||||| ||  ||||||||||| ||||||  ||||||| ||||    
T  51966 ccaaacctcacataatctcttatttgc-aaaacgtttatacttcgacttttcaaacgaaaactccaatttccatc 52039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 148; Significance: 1e-77; HSPs: 2)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 148; E-Value: 1e-77
Query Start/End: Original strand, 158 - 518
Target Start/End: Complemental strand, 26090 - 25730
Alignment:
Q  158 ccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcg 257  Q
    ||||||||||| |||||||| |||||||| ||||||||||||||| ||  |||||||||||||| || |||||  ||||| |||||||||||||||||||    
T  26090 ccctacacttaggaagaagtctggaagcatttggagtgaagaaaattgcatttttaaggtttctggtatgacatcatcgtggcacgttggtctcccatcg 25991  T
Q  258 tggcacgatttttccagcatc-tctagacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttt 356  Q
    ||||| |||| |||||| |||   |||||| |||||||||| |||| ||||||||||||| |||||||| ||||| ||||| | |||||||| |||||||    
T  25990 tggcatgattcttccagaatcggatagacaacatcagatttccaaccttcacgttttcgcgcataaaaaccaaaccgttaacccgttttcgatgccgttt 25891  T
Q  357 tcacctgcatgttcctgactcttagccctatcataatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgatttcc-aaacctcacataatcc 454  Q
    || ||| || | ||||||| |||||| |||||||||||||||| |||||||||||||||||||||         ||||||||| |||||||||||||||     
T  25890 tcgcctacacgctcctgacacttagctctatcataatctacagaaaaattcaagtttcaaccacc---aaaaaatcgatttccaaaacctcacataatct 25794  T
Q  455 cttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    |||||||||||||||||||||||  |||||||||||||  || | ||||||| |||| ||||||    
T  25793 cttatttgcaaaaacgtttagacttcgacttttcaagcataatttccaatttccatcgacccaa 25730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181; HSP #2
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 54 - 162
Target Start/End: Complemental strand, 34052 - 33944
Alignment:
Q  54 aacaactttctttcctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggata 153  Q
    |||||||| | ||||||||| |  ||||||||||  ||||||||| ||||||||||||| |||||||  |||| ||||||||||||||  ||||||||||    
T  34052 aacaacttccattcctacccgaaagaccaactcattaactcattaaaccctttatacaaggttatttgcttccaaaaaacatctctagatggttaggata 33953  T
Q  154 aagtcccta 162  Q
    |||||||||    
T  33952 aagtcccta 33944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0720 (Bit Score: 146; Significance: 2e-76; HSPs: 1)
Name: scaffold0720
Description:

Target: scaffold0720; HSP #1
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 170 - 510
Target Start/End: Complemental strand, 1000 - 662
Alignment:
Q  170 gaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgatttt 269  Q
    ||||||||||||||||||||||||||||||||| ||  |||||||||||||| |  |||||| ||||| ||||||||||||||||||||||||| |||||    
T  1000 gaagaagtttggaagcaattggagtgaagaaaattgcatttttaaggtttcttggatgacaggatcgtggcacgttggtctcccatcgtggcacaatttt 901  T
Q  270 tccagcatctctagacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgtt 369  Q
    |||||  ||   ||||  | ||||||||||||| ||||||||||||| |||||||||||||| ||||| | |||||||| | ||||||| |||  | | |    
T  900 tccagattcgacagacgacttcagattttcaaccttcacgttttcgcacataaaaatcaaaccgttaacccgttttcgatgtcgttttcgcctaaacgct 801  T
Q  370 cctgactcttagccctatcataatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgatttcc-aaacctcacataatcccttatttgcaaaa 467  Q
    |||||| |||||| ||||||||||||| || ||||||||||||||||||||||        ||||||||| ||| ||||||||||| ||||||||| |||    
T  800 cctgacacttagctctatcataatctatagaaaaattcaagtttcaaccaccc---aaaaatcgatttccaaaatctcacataatcgcttatttgc-aaa 705  T
Q  468 acgtttagacaccgacttttcaagcgaaaatcccaattttcat 510  Q
    ||||||||||||||||| |||||| ||||||||||||||||||    
T  704 acgtttagacaccgactcttcaagggaaaatcccaattttcat 662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2046 (Bit Score: 143; Significance: 1e-74; HSPs: 2)
Name: scaffold2046
Description:

Target: scaffold2046; HSP #1
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 288 - 518
Target Start/End: Original strand, 801 - 1028
Alignment:
Q  288 catcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctat 387  Q
    ||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||| ||| ||||||||| |||| ||||||| |||||||||||    
T  801 catcagattttcaaccttcacgttttcgcgcataaaaatcaaactgttaatctgttttcgatgcc-ttttcacctacatgctcctgacacttagccctat 899  T
Q  388 cataatctacagaaa-attcaagtttcaaccacccnnnnnnnntcgatttccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttt 486  Q
    ||||||||||||||| |||||||||||||||||||        |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  900 cataatctacagaaagattcaagtttcaaccaccc---aaaaatcgatttccaaacctcacataatctcttatttgcaaaaacgtttagacaccgacttt 996  T
Q  487 tcaagcgaaaatcccaattttcatcaacccaa 518  Q
    ||||| |||||||||||||| |||| ||||||    
T  997 tcaagtgaaaatcccaatttccatcgacccaa 1028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2046; HSP #2
Raw Score: 125; E-Value: 6e-64
Query Start/End: Original strand, 54 - 274
Target Start/End: Original strand, 501 - 721
Alignment:
Q  54 aacaactttctttcctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggata 153  Q
    |||||||| | ||||||||||   |||||||||| ||||||||||||||||||| |||| |||||||| |||||||||||||||||||   |||||||||    
T  501 aacaacttccattcctacccctaagaccaactcatgaactcattagaccctttagacaaggttatttccttcctaaaaacatctctagattgttaggata 600  T
Q  154 aagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctccc 253  Q
    ||||||||||||||| |||||||| |||||||| ||||||||||||||| ||  |||||||||||||| |  |||||| ||||| ||| |||||||||||    
T  601 aagtccctacacttaggaagaagtatggaagcatttggagtgaagaaaattgcatttttaaggtttcttggatgacagcatcgtggcatgttggtctccc 700  T
Q  254 atcgtggcacgatttttccag 274  Q
    |||||||||||||||||||||    
T  701 atcgtggcacgatttttccag 721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 134; Significance: 3e-69; HSPs: 6)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 134; E-Value: 3e-69
Query Start/End: Original strand, 282 - 518
Target Start/End: Complemental strand, 113416 - 113181
Alignment:
Q  282 agacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 381  Q
    ||||| ||||| ||||||||| || |||||||||| ||||||| ||||||  ||||| ||||||||| ||||||||||||| ||||||||| || |||||    
T  113416 agacaacatcaaattttcaacctttacgttttcgcgcataaaattcaaaccattaatttgttttcgatgccgttttcacctacatgttcctcacacttag 113317  T
Q  382 ccctatcataatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgatttcca-aacctcacataatcccttatttgcaaaaacgtttagacac 479  Q
    |||||||||||||||||| ||||||||||||||||||||||        |||||||||| ||| |||||||||| |||||||||||||||||||||||||    
T  113316 ccctatcataatctacagaaaaattcaagtttcaaccaccc---aaaaatcgatttccagaacatcacataatcacttatttgcaaaaacgtttagacac 113220  T
Q  480 cgacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    |||||||||||||||||||||||||||||||||||||||    
T  113219 cgacttttcaagcgaaaatcccaattttcatcaacccaa 113181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 130; E-Value: 7e-67
Query Start/End: Original strand, 282 - 518
Target Start/End: Complemental strand, 118250 - 118015
Alignment:
Q  282 agacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 381  Q
    ||||| ||||||||||||||| ||||| ||||||| ||||||||||| || |||||| ||||||||| | ||||||||||| ||||||||| || |||||    
T  118250 agacaacatcagattttcaaccttcacattttcgcgcataaaaatcataccgttaatttgttttcgatgtcgttttcacctacatgttcctcacacttag 118151  T
Q  382 ccctatcataatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgatttcc-aaacctcacataatcccttatttgcaaaaacgtttagacac 479  Q
    |||||||||||||||||| ||||||||||||||||||||||        ||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  118150 ccctatcataatctacagaaaaattcaagtttcaaccaccc---aaaaatcgatttccaaaacctcacataatcacttatttgcaaaaacgtttagacac 118054  T
Q  480 cgacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    ||| | |||||||||||||| ||||||||||||||||||    
T  118053 cgagtcttcaagcgaaaatctcaattttcatcaacccaa 118015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #3
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 292 - 388
Target Start/End: Complemental strand, 25505 - 25409
Alignment:
Q  292 agattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatc 388  Q
    ||||||||||| | ||||||||||| |||||||||||||| ||||||| |||||||| ||||||||||||| | ||||| |||  ||||||||||||    
T  25505 agattttcaacctccacgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcacctacgtgttcatgagacttagccctatc 25409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #4
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 282 - 416
Target Start/End: Original strand, 94406 - 94542
Alignment:
Q  282 agacatcatcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactctta 380  Q
    ||||| |||||||||||| ||  ||||| ||||||| |||||||| |||||  |||||| |||||||| ||||||||||||| | ||||| |||| ||||    
T  94406 agacaacatcagattttccaattttcacattttcgcgcataaaaaccaaacctttaatccgttttcgatgccgttttcacctacgtgttcatgacactta 94505  T
Q  381 gccctatcataatctacag-aaaattcaagtttcaac 416  Q
    |||||||| |||| | ||| |||||||||||||||||    
T  94506 gccctatcttaatgtgcagcaaaattcaagtttcaac 94542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #5
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 109 - 274
Target Start/End: Complemental strand, 25753 - 25588
Alignment:
Q  109 acaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatgtct 208  Q
    |||| |||| ||||||| |||||||| | ||||  | ||||||||||||||| | || || ||| |||||||||| ||||||||   ||||||| ||  |    
T  25753 acaaggttaattctttcataaaaacacccctagatgattaggataaagtcccaatacataggaaaaagtttggaaacaattggatcaaagaaaattgcat 25654  T
Q  209 ttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgatttttccag 274  Q
    |||| |||||| |||   ||||  ||||| |||||||||| |||||||||||||||||||||||||    
T  25653 ttttgaggtttttagaaagacaacatcgtggcacgttggtttcccatcgtggcacgatttttccag 25588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #6
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 101 - 192
Target Start/End: Original strand, 94160 - 94251
Alignment:
Q  101 ccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattgga 192  Q
    ||||| |||||||| |||||||| | |||||||||| ||||  |  |||||||||||||||||||||| |||||||||||||| ||||||||    
T  94160 cccttaatacaaagctatttcttccataaaaacatccctagatgaataggataaagtccctacacttaggaagaagtttggaaccaattgga 94251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 134; Significance: 3e-69; HSPs: 4)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 134; E-Value: 3e-69
Query Start/End: Original strand, 650 - 831
Target Start/End: Complemental strand, 230545 - 230365
Alignment:
Q  650 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataactttattatgagac 749  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  230545 aaggcatttctttattgattttgttttgtttcaaaataataaagttcttataatagttagtccgtttaatggaacattaagtataacttaattgtgagac 230446  T
Q  750 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagaga 831  Q
    ||| |||||||||||||||| ||||| |||||||  ||||||||| ||||||||||||||||||||||||||||||||||||    
T  230445 ccc-ttaaacataaggaaaccattcttaaagtatttgtagtcaagatttattgagaagtgggatatcattaaagcatagaga 230365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 283 - 518
Target Start/End: Original strand, 72262 - 72496
Alignment:
Q  283 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 382  Q
    |||| ||||||||||||| | ||||||||||||| | |||||||||||| ||||| | |||||||| ||| ||||| ||| |  | ||||||| ||||||    
T  72262 gacagcatcagattttcacccttcacgttttcgcgcctaaaaatcaaaccgttaacccgttttcgatgccattttcgcctacgcgctcctgacacttagc 72361  T
Q  383 cctatcataatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgatttcc-aaacctcacataatcccttatttgcaaaaacgtttagacacc 480  Q
     |||||| ||||||||| |||||||  |||||||||||||        ||| ||||| ||| ||||||||||| || ||||| |||||| ||||||||||    
T  72362 tctatcacaatctacagaaaaattcctgtttcaaccaccc---aaaaatcggtttccaaaatctcacataatcactcatttgtaaaaacatttagacacc 72458  T
Q  481 gacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  72459 gactcttcaagcgaaaatcccaattttcatcaatccaa 72496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 571 - 612
Target Start/End: Complemental strand, 230625 - 230584
Alignment:
Q  571 taatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  230625 taatagccaatctatattgattgggtttggctttgtatcatg 230584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 136315 - 136246
Alignment:
Q  18 attaattcaggctctctgaaacacaatataatcctcaacaactttctttcctaccccagggaccaactca 87  Q
    |||||||||| ||| |||||| ||||| ||||  | |||||||||| |||||||||||  ||||||||||    
T  136315 attaattcagactcactgaaaaacaatgtaattataaacaactttcattcctaccccaaagaccaactca 136246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 133; Significance: 1e-68; HSPs: 4)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 54 - 274
Target Start/End: Original strand, 6297 - 6517
Alignment:
Q  54 aacaactttctttcctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggata 153  Q
    |||||||| | |||| |||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||| ||    
T  6297 aacaacttccattccaaccccaaggaccaactcatgaactcattagaccctttatacaacgttatttctttcctaaaaacatctctatatggttaggtta 6396  T
Q  154 aagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctccc 253  Q
    ||||||||||||||| ||| ||||||||||||| ||||||||||||||| ||  |||||||||||| | |  |||||| ||||| |||||||||||||||    
T  6397 aagtccctacacttaggaaaaagtttggaagcatttggagtgaagaaaattgcatttttaaggtttattggatgacagcatcgtggcacgttggtctccc 6496  T
Q  254 atcgtggcacgatttttccag 274  Q
    |||||||||||||||||||||    
T  6497 atcgtggcacgatttttccag 6517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309; HSP #2
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 54 - 274
Target Start/End: Original strand, 8449 - 8669
Alignment:
Q  54 aacaactttctttcctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggata 153  Q
    |||||||| | |||| |||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||| ||    
T  8449 aacaacttccattccaaccccaaggaccaactcatgaactcattagaccctttatacaacgttatttctttcctaaaaacatctctatatggttaggtta 8548  T
Q  154 aagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctccc 253  Q
    ||||||||||||||| ||| ||||||||||||| ||||||||||||||| ||  |||||||||||| | |  |||||| ||||| |||||||||||||||    
T  8549 aagtccctacacttaggaaaaagtttggaagcatttggagtgaagaaaattgcatttttaaggtttattggatgacagcatcgtggcacgttggtctccc 8648  T
Q  254 atcgtggcacgatttttccag 274  Q
    |||||||||||||||||||||    
T  8649 atcgtggcacgatttttccag 8669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 282 - 518
Target Start/End: Original strand, 8743 - 8976
Alignment:
Q  282 agacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 381  Q
    ||||| |||||||||||| || ||||||||||||| |||||||| ||||| ||||| | |||||||| |||||||||  || || | ||||||  | |||    
T  8743 agacagcatcagattttcgaccttcacgttttcgcgcataaaaaccaaaccgttaacccgttttcgatgccgttttcgtctacacgctcctgagacatag 8842  T
Q  382 ccctatcataatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgattt-ccaaacctcacataatcccttatttgcaaaaacgtttagacac 479  Q
    | |||||||||||||| | |||| |||||||||||| |||         ||||||| ||||| ||||||| ||| ||||||||| |||||| || |||||    
T  8843 ctctatcataatctactgaaaaactcaagtttcaactacc----aaaaatcgatttcccaaaactcacatgatctcttatttgc-aaaacg-ttggacac 8936  T
Q  480 cgacttttcaagc-gaaaatcccaattttcatcaacccaa 518  Q
    | ||||||||| |  ||||||||||||||||| |||||||    
T  8937 caacttttcaaacataaaatcccaattttcattaacccaa 8976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309; HSP #4
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 282 - 358
Target Start/End: Original strand, 6591 - 6667
Alignment:
Q  282 agacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttc 358  Q
    ||||| |||||||||||| || ||||||||||||| |||||||| ||||| ||||| | |||||||| |||||||||    
T  6591 agacagcatcagattttcgaccttcacgttttcgcgcataaaaaccaaaccgttaacccgttttcgatgccgttttc 6667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 125; Significance: 6e-64; HSPs: 2)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 125; E-Value: 6e-64
Query Start/End: Original strand, 54 - 274
Target Start/End: Original strand, 5215 - 5435
Alignment:
Q  54 aacaactttctttcctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggata 153  Q
    |||||||| | ||||||||||| ||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||    |||||||||    
T  5215 aacaacttccattcctaccccaaggaccaacttatgaactcattagaccctttatacaacgttatttctttcctaaaaacatctctatatcgttaggata 5314  T
Q  154 aagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctccc 253  Q
    ||||||||| ||||| ||| ||||||||||||| ||||||||||||||| ||  |||||||||||| | |  |||||| ||||| |||||||||||||||    
T  5315 aagtccctatacttaggaaaaagtttggaagcatttggagtgaagaaaattgcatttttaaggtttattggatgacagcatcgtggcacgttggtctccc 5414  T
Q  254 atcgtggcacgatttttccag 274  Q
    | |||||||||||||||||||    
T  5415 aacgtggcacgatttttccag 5435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 282 - 518
Target Start/End: Original strand, 5488 - 5720
Alignment:
Q  282 agacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 381  Q
    ||||| |||||||||||| |  ||||||||||||  |||||||| ||||| ||||| | |||||||| |||||||||  || |||| ||||||  | |||    
T  5488 agacaacatcagattttcgaacttcacgttttcgagcataaaaaccaaaccgttaacccgttttcgatgccgttttcgtctacatgctcctgagacatag 5587  T
Q  382 ccctatcataatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgattt-ccaaacctcacataatcccttatttgcaaaaacgtttagacac 479  Q
    | |||||||||||||| | |||| |||||||||||| |||         ||||||| ||||| ||||||| ||| ||||||||| ||||||||  | |||    
T  5588 ctctatcataatctaccgaaaaactcaagtttcaactacc----aaaaatcgatttcccaaaactcacatgatctcttatttgc-aaaacgtt--ggcac 5680  T
Q  480 cgacttttcaagc-gaaaatcccaattttcatcaacccaa 518  Q
    | ||||||||| |  ||||||||||||||||| |||||||    
T  5681 caacttttcaaacataaaatcccaattttcattaacccaa 5720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0429 (Bit Score: 121; Significance: 2e-61; HSPs: 2)
Name: scaffold0429
Description:

Target: scaffold0429; HSP #1
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 65 - 257
Target Start/End: Complemental strand, 2640 - 2448
Alignment:
Q  65 ttcctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctaca 164  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||| |||||    
T  2640 ttcctaccccaaggaccaactcatgaactcattagaccctttatacaacgttatttctttcctaaaaacatctctagatggttaggataaagtctctaca 2541  T
Q  165 cttatgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcg 257  Q
    |||| ||||||||||||||| | ||||||||||||||| ||  || ||||||||||| || |||||  ||||| |||||||||||||||||||    
T  2540 cttaggaagaagtttggaagaatttggagtgaagaaaattgcattcttaaggtttctggtatgacatcatcgtggcacgttggtctcccatcg 2448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0429; HSP #2
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 282 - 518
Target Start/End: Complemental strand, 2444 - 2209
Alignment:
Q  282 agacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 381  Q
    ||||| |||||||||| |||| ||||||||||| | |||||||| ||||| ||||| | |||||||| ||||||||| ||| |||| |||| || |||||    
T  2444 agacaacatcagatttccaaccttcacgttttctcgcataaaaaccaaaccgttaacccgttttcgatgccgttttcgcctacatgctccttacacttag 2345  T
Q  382 ccctatcataatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgattt-ccaaacctcacataatcccttatttgcaaaaacgtttagacac 479  Q
    | ||||||||||||| || |||||||||||||||||||||         | ||||| ||||||||||||||||| ||||||| |||||||||||||||      
T  2344 ctctatcataatctatagaaaaattcaagtttcaaccacc---taaaaattgatttcccaaacctcacataatctcttattttcaaaaacgtttagactt 2248  T
Q  480 cgacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    |||||||||||||  |||| ||||||| |||||||||||    
T  2247 cgacttttcaagcataaattccaatttccatcaacccaa 2209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 115; Significance: 6e-58; HSPs: 2)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 54 - 518
Target Start/End: Complemental strand, 1937 - 1480
Alignment:
Q  54 aacaactttctttcctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggata 153  Q
    |||||||| | |||||||||||  |||||||||| ||||||||||| |||||||||||| |||||||  | |||||||||||||||||  ||||||||||    
T  1937 aacaacttccattcctaccccaaagaccaactcatgaactcattagcccctttatacaaggttatttgatacctaaaaacatctctagatggttaggata 1838  T
Q  154 aagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctccc 253  Q
    ||||||||||||||| ||| ||||||||||||| ||||||||||||||| ||  |||||||||||| | |  |||| | ||||| ||| ||||||| |      
T  1837 aagtccctacacttaggaataagtttggaagcatttggagtgaagaaaattgcatttttaaggtttattggatgactgcatcgtggcaagttggtcccga 1738  T
Q  254 atcgtggcacgatttttccagcatctctagacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccg 353  Q
     |||||||||||    ||  |  |    ||||| ||||||||||||||| ||||| ||||||| |||||||  ||||| ||||| | |||||||| |||     
T  1737 ttcgtggcacga----tcatggtttgacagacaacatcagattttcaaccttcacattttcgcgcataaaacccaaaccgttaacccgttttcgatgcca 1642  T
Q  354 ttttcacctgcatgttcctgactcttagccctatcataatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgattt-ccaaacctcacataa 451  Q
    ||||| ||| || | ||||||  |||||| |||||||||||||| | |||| ||||||||||||||||         ||||||| ||||| ||||||| |    
T  1641 ttttcgcctacacgctcctgagacttagctctatcataatctaccgaaaaactcaagtttcaaccacc----aaaaatcgatttcccaaaactcacatga 1546  T
Q  452 tcccttatttgcaaaaacgtttagacaccgacttttcaagc-gaaaatcccaattttcatcaacccaa 518  Q
    || ||||||||| |||||| || |||||| ||||||||| |  ||||||||||||||||| |||||||    
T  1545 tctcttatttgc-aaaacg-ttggacaccaacttttcaaacataaaatcccaattttcattaacccaa 1480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123; HSP #2
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 311 - 514
Target Start/End: Original strand, 6908 - 7110
Alignment:
Q  311 tttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattcaagt 410  Q
    |||||| | ||||| |||||| ||||| |  ||||||| ||||||||| ||| || | ||||||| |||||| |||||||||||||||  || |||||||    
T  6908 tttcgcgcgtaaaattcaaaccgttaacccattttcgatgccgttttcgcctacacgctcctgacacttagctctatcataatctacaacaatttcaagt 7007  T
Q  411 ttcaaccacccnnnnnnnntcgatttcc-aaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttca 509  Q
     ||||||| ||        ||  ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  7008 ctcaaccatcccaagaa--tcattttcccaaacctcacataatcccttatttggaaaaacgtttagacaccgacttttcaaacgaaaatcccaattttca 7105  T
Q  510 tcaac 514  Q
    |||||    
T  7106 tcaac 7110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 110; Significance: 6e-55; HSPs: 2)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 282 - 506
Target Start/End: Original strand, 3720 - 3943
Alignment:
Q  282 agacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 381  Q
    ||||| ||||||||||||||| |||| |||||||| |||||||||||| | |||||| ||||||||| ||||||||| ||| |||| ||||||| |||||    
T  3720 agacaacatcagattttcaaccttcatgttttcgcgcataaaaatcaatccgttaatgtgttttcgatgccgttttcgcctacatggtcctgacacttag 3819  T
Q  382 ccctatcataatctacagaaa-attcaagtttcaaccacccnnnnnnnntcgattt-ccaaacctcacataatcccttatttgcaaaaacgtttagacac 479  Q
    ||||||||||||||||||||| |||||||||||||||||||        ||||||| ||||||||||||||||| |||||||||||||||||| |||| |    
T  3820 ccctatcataatctacagaaagattcaagtttcaaccaccc---caaaatcgatttcccaaacctcacataatctcttatttgcaaaaacgttcagactc 3916  T
Q  480 cgacttttcaagcgaaaatcccaattt 506  Q
    |||||||||||||  |||| |||||||    
T  3917 cgacttttcaagcataaattccaattt 3943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453; HSP #2
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 54 - 274
Target Start/End: Original strand, 3426 - 3646
Alignment:
Q  54 aacaactttctttcctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggata 153  Q
    |||||||||| |||||||||||  |||||||||| |||||||||| ||||||||||||| |||||||| ||| |||||||||||||||  ||||||||||    
T  3426 aacaactttcattcctaccccaacgaccaactcatgaactcattaaaccctttatacaaggttatttccttcttaaaaacatctctagatggttaggata 3525  T
Q  154 aagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctccc 253  Q
    |||||| |||| ||| |||||||| || ||||| ||||||||||||||| ||  || ||||||||| | |  |||||  ||||| |||| |||||||||     
T  3526 aagtccttacatttaggaagaagtctgaaagcatttggagtgaagaaaattgcattattaaggtttattggatgacaacatcgtggcacattggtctccg 3625  T
Q  254 atcgtggcacgatttttccag 274  Q
    |||||||||||||||||||||    
T  3626 atcgtggcacgatttttccag 3646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 108; Significance: 9e-54; HSPs: 7)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 54 - 205
Target Start/End: Original strand, 59738 - 59889
Alignment:
Q  54 aacaactttctttcctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggata 153  Q
    |||||||| | ||||||||||| | |||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||    
T  59738 aacaacttccattcctaccccaagaaccaactcaataactcattagaccctttatacaaggttatttatttcctaaaaacatctctagacggttaggata 59837  T
Q  154 aagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatg 205  Q
    ||||||||||||||| ||||||||||||||||||||| |||| |||||||||    
T  59838 aagtccctacacttaggaagaagtttggaagcaattgtagtgtagaaaaatg 59889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 282 - 518
Target Start/End: Original strand, 75394 - 75630
Alignment:
Q  282 agacatcatcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactctta 380  Q
    ||||| |||||||||||| ||  ||||||||||||| | |||||  ||||| ||||| | |||||||| ||||||||| ||| |  | |||||||  |||    
T  75394 agacaacatcagattttccaattttcacgttttcgcgcgtaaaatccaaactgttaacccgttttcgatgccgttttcgcctacgcgctcctgacattta 75493  T
Q  381 gccctatcataatctacagaaaa-ttcaagtttcaaccacccnnnnnnnntcgatttcca-aacctcacataatcccttatttgcaaaaacgtttagaca 478  Q
    || |||| ||||||||||||||| ||||||||||||||||||        ||| |||||| |||||||||||||| ||||||||||||||||||||||||    
T  75494 gctctataataatctacagaaaaattcaagtttcaaccacccaaaaa---tcggtttccagaacctcacataatcacttatttgcaaaaacgtttagaca 75590  T
Q  479 ccgacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    |||||||||||||| ||||||| |||||||||||||||||    
T  75591 ccgacttttcaagcaaaaatccaaattttcatcaacccaa 75630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 282 - 518
Target Start/End: Original strand, 60031 - 60266
Alignment:
Q  282 agacatcatcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactctta 380  Q
    ||||| |||||||||||| ||  |||||||||||||   |||||| ||||| ||||| | |||||||| ||||||||| ||| || | ||||||| ||||    
T  60031 agacaacatcagattttctaattttcacgttttcgcgagtaaaaaccaaaccgttaacccgttttcgatgccgttttcgcctacacgctcctgacactta 60130  T
Q  381 gccctatcataatctacagaaa-attcaagtttcaaccacccnnnnnnnntcgattt-ccaaacctcacataatcccttatttgcaaaaacgtttagaca 478  Q
    || ||||||||||||||| ||| |||||||||||||||||||        ||||||| ||||||||||||||||| ||||||||| ||||||||||| ||    
T  60131 gcactatcataatctacaaaaagattcaagtttcaaccaccc---aaaaatcgatttcccaaacctcacataatctcttatttgc-aaaacgtttagtca 60226  T
Q  479 ccgacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    |||| ||||||| ||||||||||||||| |||||||||||    
T  60227 ccgatttttcaaacgaaaatcccaatttccatcaacccaa 60266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 288 - 518
Target Start/End: Original strand, 72550 - 72782
Alignment:
Q  288 catcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagcccta 386  Q
    |||||||||||| ||  ||||||||||||| | |||||  ||||| ||||| | |||||| |  |||||||| ||| || | ||||||| |||||| |||    
T  72550 catcagattttccaattttcacgttttcgcgcgtaaaatccaaactgttaacccgttttcaataccgttttcgcctacacgctcctgacacttagctcta 72649  T
Q  387 tcataatctacagaaaat----tcaagtttcaaccacccnnnnnnnntcgatttcca-aacctcacataatcccttatttgcaaaaacgtttagacaccg 481  Q
    | |||||||||||||||     |||||||||||||||||        ||| |||||| |||||||||||||| |||||||||||||||||||||||||||    
T  72650 taataatctacagaaaaaaaaatcaagtttcaaccacccaaaaa---tcggtttccagaacctcacataatcacttatttgcaaaaacgtttagacaccg 72746  T
Q  482 acttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    ||||||||||||||||| |||||| ||||||||||||    
T  72747 acttttcaagcgaaaat-ccaattatcatcaacccaa 72782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #5
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 101 - 278
Target Start/End: Complemental strand, 187913 - 187736
Alignment:
Q  101 ccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaa 200  Q
    ||||| |||||||| |||||||| | |||||||||| ||||  | ||||||||||||||||| |||||  || |||||||||| ||||||||   |||||    
T  187913 cccttaatacaaagctatttcttccataaaaacatccctagatgattaggataaagtccctatacttagaaataagtttggaaacaattggatcaaagaa 187814  T
Q  201 aaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgatttttccagcatc 278  Q
    || ||  |||||| ||||| |     ||||| ||||| |||||||||  |||||||||||||||||||||||||||||    
T  187813 aattgcatttttagggtttttgaaaagacagcatcgtggcacgttggcttcccatcgtggcacgatttttccagcatc 187736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #6
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 81 - 189
Target Start/End: Original strand, 75148 - 75256
Alignment:
Q  81 caactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttg 180  Q
    |||| |||| ||||||||||||||||||||||||||||||||||| |||||||| | ||||  | ||||||| ||||||||||||||   || |||||||    
T  75148 caacacaaggactcattagaccctttatacaaagttatttctttcataaaaacacccctagatgattaggatgaagtccctacacttggaaataagtttg 75247  T
Q  181 gaagcaatt 189  Q
    ||| |||||    
T  75248 gaaacaatt 75256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 282 - 357
Target Start/End: Complemental strand, 187687 - 187612
Alignment:
Q  282 agacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgtttt 357  Q
    ||||| || ||||||||| |  |||||||||||||   |||||||||||| ||||||| |||||||| ||||||||    
T  187687 agacaacaccagattttccaatttcacgttttcgcgtgtaaaaatcaaaccgttaatccgttttcgatgccgtttt 187612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 106; Significance: 1e-52; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 81 - 274
Target Start/End: Complemental strand, 7092 - 6899
Alignment:
Q  81 caactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttg 180  Q
    |||| |||||||||||||||||||||||||||||||||||||||| ||||| || | ||||  ||||||||||||||| ||||||||  ||| |||||||    
T  7092 caacacaagaactcattagaccctttatacaaagttatttctttcataaaagcacccctagatggttaggataaagtctctacacttgggaataagtttg 6993  T
Q  181 gaagcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgatttttccag 274  Q
    ||| |||||||||||||||||| ||| |||||||||||||| ||||||| ||||||| ||| |||||  |||||| ||||||| ||||||||||    
T  6992 gaaacaattggagtgaagaaaattgtatttttaaggtttcttgtgtgactgaatcgtggcatgttggcatcccattgtggcacaatttttccag 6899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 288 - 416
Target Start/End: Complemental strand, 6819 - 6690
Alignment:
Q  288 catcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctat 387  Q
    |||||||||||| || |||| |||||||| |||||||||||||| |||||||||||||||| | |||||||| || |||||||||||| ||||||   ||    
T  6819 catcagattttctaccttcatgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgtcgttttcaactacatgttcctgacacttagcatcat 6720  T
Q  388 cataatctacag-aaaattcaagtttcaac 416  Q
    |||| ||||||| |||||||||||||||||    
T  6719 catattctacagaaaaattcaagtttcaac 6690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 104; Significance: 2e-51; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 68 - 211
Target Start/End: Original strand, 146948 - 147091
Alignment:
Q  68 ctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacactt 167  Q
    ||||||||  |||||||||| ||||||||||| |||||||||||| |||||||||| |||||||||||||||||  ||||||||||||||||||||||||    
T  146948 ctaccccaaagaccaactcatgaactcattagcccctttatacaaggttatttcttacctaaaaacatctctagaaggttaggataaagtccctacactt 147047  T
Q  168 atgaagaagtttggaagcaattggagtgaagaaaaatgtctttt 211  Q
    | ||||||||||||||||||||||||||||||||||||| ||||    
T  147048 aggaagaagtttggaagcaattggagtgaagaaaaatgtatttt 147091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 282 - 518
Target Start/End: Original strand, 147227 - 147461
Alignment:
Q  282 agacatcatcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactctta 380  Q
    ||||| |||||||||||| ||  ||||||||||||| |||||||  ||||| ||||| | |||||||| ||||||||| ||| || | ||||||| ||||    
T  147227 agacaacatcagattttctaatcttcacgttttcgcgcataaaatccaaaccgttaacccgttttcgatgccgttttcgcctacacgctcctgacactta 147326  T
Q  381 gccctatcataatctacag-aaaattcaagtttcaaccacccnnnnnnnntcgatttcca-aacctcacataatcccttatttgcaaaaacgtttagaca 478  Q
    || |||||||||||||||| ||||||||||||||||||||||        |||||||||| |||||||||||||| ||||||||| |||||| || ||||    
T  147327 gctctatcataatctacagaaaaattcaagtttcaaccaccc---aacaatcgatttccagaacctcacataatcacttatttgc-aaaacg-ttggaca 147421  T
Q  479 ccgacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    |||||||||||| |  |||| ||||||||||| |||||||    
T  147422 ccgacttttcaaacataaattccaattttcattaacccaa 147461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 291 - 415
Target Start/End: Original strand, 87737 - 87862
Alignment:
Q  291 cagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcat 390  Q
    |||||||||||| | ||||||||||| |||||||||||||| ||||||| |||||||| ||||||||||||| | ||||| |||| |||||||||||| |    
T  87737 cagattttcaacctccacgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcacctacgtgttcatgacacttagccctatctt 87836  T
Q  391 aatctacag-aaaattcaagtttcaa 415  Q
    ||| ||||| ||||||||||||||||    
T  87837 aatgtacagaaaaattcaagtttcaa 87862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 102; Significance: 3e-50; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 81 - 274
Target Start/End: Original strand, 76525 - 76718
Alignment:
Q  81 caactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttg 180  Q
    |||| ||||||||||||||||||||| |||||||||||||||||| ||||| || | ||||  ||||||||||||||||||||||||| ||| |||||||    
T  76525 caacacaagaactcattagaccctttgtacaaagttatttctttcataaaagcacccctagaaggttaggataaagtccctacacttaggaataagtttg 76624  T
Q  181 gaagcaattggagtgaagaaaaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgatttttccag 274  Q
    ||| |||||||| ||||||||| ||  |||||||||||||| || ||   |||| || ||| ||||||||||||||||||||||||||||||||    
T  76625 gaaacaattggattgaagaaaattgcatttttaaggtttcttgtctgtaggaatggtggcatgttggtctcccatcgtggcacgatttttccag 76718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 282 - 421
Target Start/End: Original strand, 76792 - 76932
Alignment:
Q  282 agacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 381  Q
    ||||| ||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||| ||||||| |||| |||||    
T  76792 agacaacatcagattttcaaccttcacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgttcttgacacttag 76891  T
Q  382 ccctatcataatctacag-aaaattcaagtttcaaccaccc 421  Q
    |||||||||||| ||||| ||||||||||||||||| ||||    
T  76892 ccctatcataatgtacagaaaaattcaagtttcaacaaccc 76932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 89; Significance: 2e-42; HSPs: 2)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 54 - 202
Target Start/End: Original strand, 7011 - 7157
Alignment:
Q  54 aacaactttctttcctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggata 153  Q
    |||||||| | ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||    
T  7011 aacaacttccattcctaccccaaggaccaactcatgaactcattagaccctttatacaaagttatttctttcctaaaaacatttctagatggttaggata 7110  T
Q  154 aagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaa 202  Q
    |  |||||||||||| ||| |||| |||||||| |||||||||||||||    
T  7111 agctccctacactta-gaa-aagtctggaagcatttggagtgaagaaaa 7157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273; HSP #2
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 304 - 518
Target Start/End: Original strand, 7305 - 7518
Alignment:
Q  304 ttcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaa 403  Q
    ||||||||||||  | |||||  |||||  |||| | |||||||| ||||||||| ||| || | || |||| |||||  ||||||||||||||||||||    
T  7305 ttcacgttttcgtgcgtaaaatccaaaccattaacccgttttcgatgccgttttcgcctacacgctcttgacacttagatctatcataatctacagaaaa 7404  T
Q  404 -ttcaagtttcaaccacccnnnnnnnntcgatttcc-aaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatccc 501  Q
     ||||||||||||||||||        ||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||| ||    
T  7405 attcaagtttcaaccacccaaaaa---tcgatttcccaaacctcacataatctcttatttgcaaaaacgtttagactccgacttttcaagcgtaaattcc 7501  T
Q  502 aattttcatcaacccaa 518  Q
    ||||| |||| ||||||    
T  7502 aatttccatcgacccaa 7518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 89; Significance: 2e-42; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 65 - 221
Target Start/End: Original strand, 116650 - 116806
Alignment:
Q  65 ttcctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctaca 164  Q
    |||||||||||  |||||||||| |||||||||||||||||||||||| ||||| || |||||||||| |||| |||  |||||||||||||| ||||||    
T  116650 ttcctaccccaaagaccaactcatgaactcattagaccctttatacaaggttatctccttcctaaaaaaatctatagatggttaggataaagttcctaca 116749  T
Q  165 cttatgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggtttct 221  Q
    |||| |||||||||||||| || ||||||||||||||| ||  ||||||||||||||    
T  116750 cttaagaagaagtttggaaacatttggagtgaagaaaattgcatttttaaggtttct 116806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 283 - 518
Target Start/End: Original strand, 117033 - 117266
Alignment:
Q  283 gacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagc 382  Q
    |||| ||||| ||||||| | |||||||||| || | |||||||||||| ||||| | |||| ||| || |||||| ||| |  | ||||||| | ||||    
T  117033 gacaacatcaaattttcacccttcacgtttttgcgcctaaaaatcaaaccgttaacccgtttacgatgctgttttcgcctacgcgctcctgacacatagc 117132  T
Q  383 cctatcataatctacagaaaa-ttcaagtttcaaccacccnnnnnnnntcgatttccaaa-cctcacataatcccttatttgcaaaaacgtttagacacc 480  Q
     |||||| ||||||||||||| ||| ||||||||||||||         || |||| ||| |||||||||||| || |||||||||| | ||||||||||    
T  117133 tctatcacaatctacagaaaaattccagtttcaaccacccaaaata---cggtttctaaaacctcacataatcactcatttgcaaaa-catttagacacc 117228  T
Q  481 gacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  117229 gactcttcaagcgaaaatcccaattttcatcaatccaa 117266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 87; Significance: 3e-41; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 84 - 202
Target Start/End: Original strand, 14493 - 14611
Alignment:
Q  84 ctcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaa 183  Q
    |||| ||||||||||||||||||| |||| |||||||||||||||||||||| |||||  |||| |||||||||||||||||||| ||||||||||||||    
T  14493 ctcacgaactcattagaccctttacacaaggttatttctttcctaaaaacatttctagatggttgggataaagtccctacacttaggaagaagtttggaa 14592  T
Q  184 gcaattggagtgaagaaaa 202  Q
    |||||||||||||||||||    
T  14593 gcaattggagtgaagaaaa 14611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 84; Significance: 2e-39; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 54 - 221
Target Start/End: Complemental strand, 298 - 131
Alignment:
Q  54 aacaactttctttcctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggata 153  Q
    |||||||| | |||||| || | ||||||||||| ||||||||| |||||||||||||| ||||| || ||||||||||||| |||||  ||||||||||    
T  298 aacaacttccattcctatcctaaggaccaactcatgaactcattggaccctttatacaacgttatctccttcctaaaaacatttctagatggttaggata 199  T
Q  154 aagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggtttct 221  Q
    |||| | |||||||| |||||||| ||||| || ||||||||||||||| ||| ||||||||||||||    
T  198 aagttcatacacttaagaagaagtctggaaacatttggagtgaagaaaattgtatttttaaggtttct 131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 84; Significance: 2e-39; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 67 - 202
Target Start/End: Original strand, 38887 - 39020
Alignment:
Q  67 cctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacact 166  Q
    ||||||||| |||||| |||| ||||||||||||||||| |||||| ||||| |||||||||||||||||||||  || |||||||||||||||||||||    
T  38887 cctaccccaaggacca-ctcatgaactcattagaccctt-atacaacgttatatctttcctaaaaacatctctatacgtttaggataaagtccctacact 38984  T
Q  167 tatgaagaagtttggaagcaattggagtgaagaaaa 202  Q
    || ||||||||||||||||| |||||||||||||||    
T  38985 taggaagaagtttggaagcatttggagtgaagaaaa 39020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 437 - 518
Target Start/End: Original strand, 21741 - 21822
Alignment:
Q  437 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||| | |||||||    
T  21741 ccaaacctcacataatcccttatttgcaagaacgtttagacaccgtcttttcgagcgaaaatcccaattttcgtgaacccaa 21822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 84; Significance: 2e-39; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 67 - 202
Target Start/End: Complemental strand, 29836 - 29703
Alignment:
Q  67 cctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacact 166  Q
    ||||||||| |||||| |||| ||||||||||||||||| |||||| ||||| |||||||||||||||||||||  || |||||||||||||||||||||    
T  29836 cctaccccaaggacca-ctcatgaactcattagaccctt-atacaacgttatatctttcctaaaaacatctctatacgtttaggataaagtccctacact 29739  T
Q  167 tatgaagaagtttggaagcaattggagtgaagaaaa 202  Q
    || ||||||||||||||||| |||||||||||||||    
T  29738 taggaagaagtttggaagcatttggagtgaagaaaa 29703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 67 - 202
Target Start/End: Complemental strand, 35237 - 35104
Alignment:
Q  67 cctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacact 166  Q
    ||||||||| |||||| |||| ||||||||||||||||| |||||| ||||| |||||||||||||||||||||  || |||||||||||||||||||||    
T  35237 cctaccccaaggacca-ctcatgaactcattagaccctt-atacaacgttatatctttcctaaaaacatctctatacgtttaggataaagtccctacact 35140  T
Q  167 tatgaagaagtttggaagcaattggagtgaagaaaa 202  Q
    || ||||||||||||||||| |||||||||||||||    
T  35139 taggaagaagtttggaagcatttggagtgaagaaaa 35104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 84; Significance: 2e-39; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 67 - 202
Target Start/End: Complemental strand, 46670 - 46537
Alignment:
Q  67 cctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacact 166  Q
    ||||||||| |||||| |||| ||||||||||||||||| |||||| ||||| |||||||||||||||||||||  || |||||||||||||||||||||    
T  46670 cctaccccaaggacca-ctcatgaactcattagaccctt-atacaacgttatatctttcctaaaaacatctctatacgtttaggataaagtccctacact 46573  T
Q  167 tatgaagaagtttggaagcaattggagtgaagaaaa 202  Q
    || ||||||||||||||||| |||||||||||||||    
T  46572 taggaagaagtttggaagcatttggagtgaagaaaa 46537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 67 - 202
Target Start/End: Complemental strand, 52074 - 51941
Alignment:
Q  67 cctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacact 166  Q
    ||||||||| |||||| |||| ||||||||||||||||| |||||| ||||| |||||||||||||||||||||  || |||||||||||||||||||||    
T  52074 cctaccccaaggacca-ctcatgaactcattagaccctt-atacaacgttatatctttcctaaaaacatctctatacgtttaggataaagtccctacact 51977  T
Q  167 tatgaagaagtttggaagcaattggagtgaagaaaa 202  Q
    || ||||||||||||||||| |||||||||||||||    
T  51976 taggaagaagtttggaagcatttggagtgaagaaaa 51941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 81 - 134
Target Start/End: Complemental strand, 38742 - 38689
Alignment:
Q  81 caactcaagaactcattagaccctttatacaaagttatttctttcctaaaaaca 134  Q
    |||| |||||||||||||||||||||||||||||||||||||||| || |||||    
T  38742 caacacaagaactcattagaccctttatacaaagttatttctttcatagaaaca 38689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 84; Significance: 2e-39; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 67 - 202
Target Start/End: Complemental strand, 174252 - 174119
Alignment:
Q  67 cctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacact 166  Q
    ||||||||| |||||| |||| ||||||||||||||||| |||||| ||||| |||||||||||||||||||||  || |||||||||||||||||||||    
T  174252 cctaccccaaggacca-ctcatgaactcattagaccctt-atacaacgttatatctttcctaaaaacatctctatacgtttaggataaagtccctacact 174155  T
Q  167 tatgaagaagtttggaagcaattggagtgaagaaaa 202  Q
    || ||||||||||||||||| |||||||||||||||    
T  174154 taggaagaagtttggaagcatttggagtgaagaaaa 174119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 82; Significance: 3e-38; HSPs: 3)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 101 - 274
Target Start/End: Complemental strand, 14457 - 14284
Alignment:
Q  101 ccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaa 200  Q
    ||||| |||||||| |||||||| | |||||||||| ||||  | ||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||    
T  14457 cccttaatacaaagctatttcttccataaaaacatccctagatgattaggataaagtccctacacttaggaagaagtttggaaccaattggagcgaagaa 14358  T
Q  201 aaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgatttttccag 274  Q
    || ||  ||||| |||||| | ||   |||| ||||| |||||||||| |||||||||||||||||||||||||    
T  14357 aattgcatttttgaggtttttggtcaaacagcatcgtggcacgttggtttcccatcgtggcacgatttttccag 14284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251; HSP #2
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 282 - 403
Target Start/End: Complemental strand, 14210 - 14089
Alignment:
Q  282 agacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 381  Q
    ||||| ||||||||||||||| |  |||||||||| |||||||||||||| ||||||| |||||||| ||||||||| ||| |||| |||| || |||||    
T  14210 agacaacatcagattttcaacttctacgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcgcctacatgctcctaacacttag 14111  T
Q  382 ccctatcataatctacagaaaa 403  Q
    | ||||||||||  ||||||||    
T  14110 cactatcataatgcacagaaaa 14089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 223
Target Start/End: Complemental strand, 22513 - 22381
Alignment:
Q  91 actcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattg 190  Q
    ||||||||  ||||| |||  ||| |||||||||| |||||||||| ||||  | ||||||||||||||||| |||||  || || |||||||  |||||    
T  22513 actcattaagcccttaatattaagctatttctttcataaaaacatccctagatgattaggataaagtccctatacttagtaataattttggaattaattg 22414  T
Q  191 gagtgaagaaaaatgtctttttaaggtttctag 223  Q
    ||   ||||||| ||  ||||||||||||||||    
T  22413 gatcaaagaaaattgcatttttaaggtttctag 22381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 82; Significance: 3e-38; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 437 - 518
Target Start/End: Complemental strand, 11048 - 10967
Alignment:
Q  437 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11048 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 10967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 437 - 518
Target Start/End: Complemental strand, 5330 - 5249
Alignment:
Q  437 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5330 ccaaacctcacataatcccttatttgtaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 5249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1276 (Bit Score: 76; Significance: 1e-34; HSPs: 2)
Name: scaffold1276
Description:

Target: scaffold1276; HSP #1
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 341 - 518
Target Start/End: Original strand, 804 - 978
Alignment:
Q  341 gttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaa-ttcaagtttcaaccacccnnnnnnnntcgatttcca 439  Q
    |||||||| | ||||||| ||| || | ||||||| |||||| |||||||||||||||||||| ||||||||||||||||||        ||||||||||    
T  804 gttttcgatgtcgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaattcaagtttcaaccacccaacaa---tcgatttcca 900  T
Q  440 -aacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
     |||||||||||||| |||||||||||| |  |||||||||||| |||||||||||||||||||||||||| ||||||||    
T  901 gaacctcacataatcacttatttgcaaaca--tttagacaccgagttttcaagcgaaaatcccaattttcaccaacccaa 978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1276; HSP #2
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 67 - 205
Target Start/End: Original strand, 486 - 622
Alignment:
Q  67 cctaccccagggaccaactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacact 166  Q
    |||||||||  ||||||||||  ||||||||||||||||||||||| |||||||||||| |||||||| | ||||  | ||||||| |||||||||||||    
T  486 cctaccccaaagaccaactcat-aactcattagaccctttatacaa-gttatttctttcataaaaacacccctagatgattaggatgaagtccctacact 583  T
Q  167 tatgaagaagtttggaagcaattggagtgaagaaaaatg 205  Q
    ||  || |||||||||| ||||| |  ||||||||||||    
T  584 tagaaataagtttggaaacaatttggttgaagaaaaatg 622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 74; Significance: 2e-33; HSPs: 2)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 101 - 278
Target Start/End: Complemental strand, 10556 - 10379
Alignment:
Q  101 ccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaa 200  Q
    ||||| |||||||| |||||||| | |||||||||| ||||  | ||||||||||||||||| ||||| ||| ||||||| || ||||||||| ||||||    
T  10556 cccttaatacaaagctatttcttccataaaaacatccctagatgattaggataaagtccctaaacttaggaataagtttgaaaccaattggagcgaagaa 10457  T
Q  201 aaatgtctttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgatttttccagcatc 278  Q
    || ||  |||||||||||| | ||   |||  ||||| |||||||||| |||||||||||||||||||||||||||||    
T  10456 aattgcatttttaaggtttttggtcaaacaacatcgtggcacgttggtttcccatcgtggcacgatttttccagcatc 10379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574; HSP #2
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 282 - 403
Target Start/End: Complemental strand, 10330 - 10209
Alignment:
Q  282 agacatcatcagattttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttag 381  Q
    ||||| || ||||||||| |  |||||||||||   |||||||||||||| ||||||| |||||||| ||||||||||||| |||| |||| || |||||    
T  10330 agacaacaccagattttccaatttcacgttttcctgcataaaaatcaaaccgttaatccgttttcgatgccgttttcacctacatgctcctaacacttag 10231  T
Q  382 ccctatcataatctacagaaaa 403  Q
    | ||||||||||  ||||||||    
T  10230 cactatcataatgcacagaaaa 10209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 71; Significance: 1e-31; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 437 - 515
Target Start/End: Complemental strand, 2138 - 2060
Alignment:
Q  437 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacc 515  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  2138 ccaaacctcacataatcccttatttgcaaaaacgtttagacactgacttttcaagcaaaaatcccaattttcatcaacc 2060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0825 (Bit Score: 70; Significance: 4e-31; HSPs: 1)
Name: scaffold0825
Description:

Target: scaffold0825; HSP #1
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 437 - 514
Target Start/End: Complemental strand, 679 - 602
Alignment:
Q  437 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaac 514  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  679 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatctcaatcttcatcaac 602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 67; Significance: 3e-29; HSPs: 6)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 377 - 518
Target Start/End: Original strand, 19405 - 19545
Alignment:
Q  377 cttagccctatcataatctacagaaaa-ttcaagtttcaaccacccnnnnnnnntcgatttcca-aacctcacataatcccttatttgcaaaaacgttta 474  Q
    |||||| |||||||||||||||||||| |||| |||||||||||||        ||| |||||| ||||| || ||||| ||||||||||||||||||||    
T  19405 cttagctctatcataatctacagaaaaattcatgtttcaaccacccaaaaa---tcggtttccataaccttacgtaatcacttatttgcaaaaacgttta 19501  T
Q  475 gacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||    
T  19502 gacactgacttttcaagcgaaaatcccaattttcatcaagccaa 19545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 86 - 205
Target Start/End: Original strand, 15770 - 15889
Alignment:
Q  86 caagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagc 185  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||| | ||||  | |||||||||||||||||||||||  || |||||||||| |    
T  15770 caaggactcattagaccctttatacaaagttatttctttcataaaaacacccctagatgattaggataaagtccctacacttagaaataagtttggaaac 15869  T
Q  186 aattggagtgaagaaaaatg 205  Q
    |||| |  ||||||||||||    
T  15870 aatttggttgaagaaaaatg 15889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #3
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 444 - 518
Target Start/End: Original strand, 11154 - 11228
Alignment:
Q  444 tcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    |||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  11154 tcacataatcacttattttcaaaaacgtttagacactgacttttcaagcgaaaatcccaattttcatcaacccaa 11228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #4
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 444 - 518
Target Start/End: Original strand, 5034 - 5108
Alignment:
Q  444 tcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||| | ||||||| ||||||||||||||||||    
T  5034 tcacataatcacttattttcaaaaacgtttagacaccgacttttcatgtgaaaatctcaattttcatcaacccaa 5108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #5
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 92 - 205
Target Start/End: Original strand, 4704 - 4817
Alignment:
Q  92 ctcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattgg 191  Q
    ||||||||||||||||| |||||||||||||||  |||||||| | ||||  | ||||||| |||| ||||||||||  || |||||||||| ||||| |    
T  4704 ctcattagaccctttattcaaagttatttcttttataaaaacacccctagatgattaggatgaagttcctacacttagaaataagtttggaaacaatttg 4803  T
Q  192 agtgaagaaaaatg 205  Q
      ||||||||||||    
T  4804 gttgaagaaaaatg 4817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #6
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 92 - 205
Target Start/End: Original strand, 10825 - 10938
Alignment:
Q  92 ctcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattgg 191  Q
    ||||||||||||||||| |||||||||||||||  |||||||| | ||||  | ||||||| |||| ||||||||||  || |||||||||| ||||| |    
T  10825 ctcattagaccctttattcaaagttatttcttttataaaaacacccctagatgattaggatgaagttcctacacttagaaataagtttggaaacaatttg 10924  T
Q  192 agtgaagaaaaatg 205  Q
      ||||||||||||    
T  10925 gttgaagaaaaatg 10938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 66; Significance: 1e-28; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 434 - 515
Target Start/End: Original strand, 35245 - 35326
Alignment:
Q  434 tttccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacc 515  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||    
T  35245 tttcgaaacctcacataatcccttatttgcaaaaacgtttagacaccaactttacaagcgaaaatcccaatttacatcaacc 35326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 64; Significance: 2e-27; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 81 - 203
Target Start/End: Original strand, 36066 - 36189
Alignment:
Q  81 caactcaagaactcattagaccctttatacaaagttatttctttcctaaaaaca-tctctagtcggttaggataaagtccctacacttatgaagaagttt 179  Q
    |||| ||||| |||||||||||||||||||||||||||||||||| ||||||||  | || |  ||||||||||||||||||| ||||| ||| ||||||    
T  36066 caacacaagacctcattagaccctttatacaaagttatttctttcataaaaacacccccttgatggttaggataaagtccctaaacttaggaataagttt 36165  T
Q  180 ggaagcaattggagtgaagaaaaa 203  Q
    |||||||||| ||| |||||||||    
T  36166 ggaagcaatttgagcgaagaaaaa 36189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1957 (Bit Score: 61; Significance: 1e-25; HSPs: 2)
Name: scaffold1957
Description:

Target: scaffold1957; HSP #1
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 81 - 205
Target Start/End: Complemental strand, 519 - 395
Alignment:
Q  81 caactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttg 180  Q
    |||| ||||||||||||||||| |||||||||||||||||||||| |||||||| | ||||  | |||||||||||||||||||||||  || |||||||    
T  519 caacacaagaactcattagaccatttatacaaagttatttctttcataaaaacacccctagatgattaggataaagtccctacacttagaaataagtttg 420  T
Q  181 gaagcaattggagtgaagaaaaatg 205  Q
     || ||||| |  ||||||||||||    
T  419 aaaacaatttggttgaagaaaaatg 395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1957; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 369 - 421
Target Start/End: Complemental strand, 173 - 120
Alignment:
Q  369 tcctgactcttagccctatcataatctacag-aaaattcaagtttcaaccaccc 421  Q
    ||||||| |||||| ||| |||||||||||| ||||||||||||||||||||||    
T  173 tcctgacacttagctctaacataatctacagaaaaattcaagtttcaaccaccc 120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 61; Significance: 1e-25; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 648 - 712
Target Start/End: Complemental strand, 8510 - 8446
Alignment:
Q  648 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtcc 712  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8510 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtcc 8446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 556 - 612
Target Start/End: Complemental strand, 8602 - 8546
Alignment:
Q  556 tgtttgaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  8602 tgttggaataagccctaatagccaatctatattgattgggttcggctttgtatcatg 8546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0597 (Bit Score: 57; Significance: 2e-23; HSPs: 2)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 297 - 416
Target Start/End: Complemental strand, 1786 - 1666
Alignment:
Q  297 ttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatcta 396  Q
    |||||| ||||||||||||| |||||||||||||| ||||||| |||||||| ||||||||||||| | ||||| |||| |||||||||||   | | ||    
T  1786 ttcaactttcacgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcacctacttgttcatgacacttagccctatatcagtgta 1687  T
Q  397 cag-aaaattcaagtttcaac 416  Q
    ||| |||||||||||||||||    
T  1686 cagaaaaattcaagtttcaac 1666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0597; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 223
Target Start/End: Complemental strand, 2125 - 2011
Alignment:
Q  109 acaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatgtct 208  Q
    |||| |||| ||||||| |||||||| | ||||  | ||||||||||||||||| |||||  || |||||||||| ||||||||   ||||||| ||  |    
T  2125 acaaggttaattctttcataaaaacacccctagatgattaggataaagtccctatacttagaaataagtttggaaacaattggatctaagaaaattgcat 2026  T
Q  209 ttttaaggtttctag 223  Q
    |||||||||||||||    
T  2025 ttttaaggtttctag 2011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 54; Significance: 1e-21; HSPs: 2)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 304 - 416
Target Start/End: Complemental strand, 23305 - 23192
Alignment:
Q  304 ttcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacag-aaa 402  Q
    ||||||||||||| | |||||| ||||| ||||||| |||||||| ||||||||||||| | ||||| |||| |||||||||||| |||| | ||| |||    
T  23305 ttcacgttttcgcgcgtaaaaaccaaaccgttaatccgttttcgatgccgttttcacctacgtgttcatgacacttagccctatcttaatgtgcagaaaa 23206  T
Q  403 attcaagtttcaac 416  Q
    ||||||||||||||    
T  23205 attcaagtttcaac 23192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 192
Target Start/End: Complemental strand, 23594 - 23483
Alignment:
Q  81 caactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttg 180  Q
    |||| |||||||||||||||||  |||||||| ||||| | | || |||||||| | ||||  | |||||||||||||||||   |||  || |||||||    
T  23594 caacgcaagaactcattagacctcttatacaaggttatctatgtcataaaaacacccctagatgattaggataaagtccctatttttagaaataagtttg 23495  T
Q  181 gaagcaattgga 192  Q
    ||| ||||||||    
T  23494 gaaacaattgga 23483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 54; Significance: 1e-21; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 437 - 518
Target Start/End: Original strand, 29741 - 29821
Alignment:
Q  437 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    |||||||||||||| || |||||||||||||  |||||||||||||||||||||| |||||||||||||||||| |||||||    
T  29741 ccaaacctcacatagtctcttatttgcaaaat-gtttagacaccgacttttcaagggaaaatcccaattttcattaacccaa 29821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 437 - 518
Target Start/End: Original strand, 35206 - 35286
Alignment:
Q  437 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccaattttcatcaacccaa 518  Q
    |||||||||||||| || |||||||||||||  |||||||||||||||||||||| |||||||||||||||||| |||||||    
T  35206 ccaaacctcacatagtctcttatttgcaaaat-gtttagacaccgacttttcaagggaaaatcccaattttcattaacccaa 35286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 53; Significance: 6e-21; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 556 - 612
Target Start/End: Complemental strand, 23825 - 23769
Alignment:
Q  556 tgtttgaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23825 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 23769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 53; Significance: 6e-21; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 282 - 416
Target Start/End: Original strand, 146030 - 146166
Alignment:
Q  282 agacatcatcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactctta 380  Q
    ||||| |||||||||||| ||  ||||||||||||| | |||||| ||||| ||||| | |||||||| ||||||||| ||| || | ||||||| ||||    
T  146030 agacaacatcagattttccaattttcacgttttcgcgcgtaaaaaccaaaccgttaacccgttttcgatgccgttttcgcctacacgctcctgacactta 146129  T
Q  381 gccctatcataatctacag-aaaattcaagtttcaac 416  Q
    |||||||| |||| ||||| |||||||||||||||||    
T  146130 gccctatcttaatgtacagaaaaattcaagtttcaac 146166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465 (Bit Score: 50; Significance: 4e-19; HSPs: 2)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 296 - 416
Target Start/End: Complemental strand, 10773 - 10652
Alignment:
Q  296 tttcaacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatct 395  Q
    ||||||| | |||||||| || |||||||||||||| ||||||| ||||| || ||||||||||||| | ||||| |||| |||||||||||| |||| |    
T  10773 tttcaacctccacgtttttgcgcataaaaatcaaaccgttaatccgtttttgatgccgttttcacctacttgttcatgacacttagccctatcttaatgt 10674  T
Q  396 acag-aaaattcaagtttcaac 416  Q
     ||| |||| ||||||||||||    
T  10673 gcagaaaaagtcaagtttcaac 10652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 278
Target Start/End: Complemental strand, 11025 - 10856
Alignment:
Q  109 acaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatgtct 208  Q
    |||| |||| ||||||| |||||||| |  |||  | ||||||||||||||||| |||||  ||  ||||||||| ||||||||   ||||||| ||       
T  11025 acaaggttaattctttcataaaaacacccttagatgattaggataaagtccctatacttagaaatcagtttggaaacaattggatcaaagaaaattgcag 10926  T
Q  209 ttttaaggtttctagtgtgacagaatcgtagcacgttggtctcccatcgtggcacgatttttccagcatc 278  Q
    ||||||||||| |     || || ||||| |||||||||  | |||||||||||||||||||||||||||    
T  10925 ttttaaggtttttgaaaagagagcatcgtggcacgttggctttccatcgtggcacgatttttccagcatc 10856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0303 (Bit Score: 50; Significance: 4e-19; HSPs: 2)
Name: scaffold0303
Description:

Target: scaffold0303; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 101 - 202
Target Start/End: Complemental strand, 1069 - 968
Alignment:
Q  101 ccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaa 200  Q
    ||||| |||||||| |||||||| | |||||||||| ||||  | |||||||||| |||||||| ||| |||||||||||||| ||||||||| ||||||    
T  1069 cccttaatacaaagctatttcttccataaaaacatccctagatgattaggataaactccctacatttaggaagaagtttggaaccaattggagcgaagaa 970  T
Q  201 aa 202  Q
    ||    
T  969 aa 968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0303; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 282 - 416
Target Start/End: Complemental strand, 823 - 687
Alignment:
Q  282 agacatcatcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactctta 380  Q
    ||||| |||||||||||| ||  || ||||||| || | |||||| ||||||||||||| ||||| || ||||||||| ||| || | ||||||| ||||    
T  823 agacaacatcagattttccaatttttacgtttttgcacgtaaaaaccaaacagttaatccgttttggatgccgttttcgcctacacgctcctgacactta 724  T
Q  381 gccctatcataatctacag-aaaattcaagtttcaac 416  Q
    || ||||| |||| ||||| |||||||||||||||||    
T  723 gctctatcttaatgtacagaaaaattcaagtttcaac 687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326 (Bit Score: 49; Significance: 1e-18; HSPs: 2)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 556 - 612
Target Start/End: Original strand, 16523 - 16579
Alignment:
Q  556 tgtttgaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  16523 tgttggaataagccctaatagccaatctatattgattgggtttggctttatatcatg 16579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326; HSP #2
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 648 - 681
Target Start/End: Original strand, 16615 - 16648
Alignment:
Q  648 acaaggcatttctttattgattttgttttgtttc 681  Q
    |||||||||||||||||||||||||||||| |||    
T  16615 acaaggcatttctttattgattttgttttgnttc 16648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 311 - 492
Target Start/End: Original strand, 6682 - 6860
Alignment:
Q  311 tttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattcaagt 410  Q
    |||||| | ||||| |||||| ||||||| | ||| || ||| ||||| ||| ||   ||||||| ||| || ||||||||||||||||  | |||||||    
T  6682 tttcgcgcgtaaaattcaaaccgttaatcggattttgatgccattttcgcctacactctcctgacacttggctctatcataatctacagctatttcaagt 6781  T
Q  411 ttcaaccacccnnnnnnnntcgatttccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagc 492  Q
     ||| ||||||        |||||||||||||||||||||||| ||| |||| |||||||||||||| ||||||||||||||    
T  6782 ctcatccaccccaaaa---tcgatttccaaacctcacataatctcttgtttggaaaaacgtttagactccgacttttcaagc 6860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 48; Significance: 6e-18; HSPs: 2)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 101 - 192
Target Start/End: Complemental strand, 7608 - 7517
Alignment:
Q  101 ccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattgga 192  Q
    ||||| |||||||| |||||||| | |||||| ||| ||||  | ||||||||||||||||||||||| |||||||||||||| ||||||||    
T  7608 cccttaatacaaagctatttcttccataaaaatatccctagatgattaggataaagtccctacacttaggaagaagtttggaaccaattgga 7517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 282 - 403
Target Start/End: Complemental strand, 7362 - 7240
Alignment:
Q  282 agacatcatcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactctta 380  Q
    ||||| |||||||||||| ||  ||||||||||||| | |||||| |||||  ||||||  ||||||| | ||||||||||| |||| |||| || ||||    
T  7362 agacaacatcagattttccaattttcacgttttcgcgcgtaaaaaccaaacttttaatccattttcgatgtcgttttcacctacatgctcctaacactta 7263  T
Q  381 gccctatcataatctacagaaaa 403  Q
    || ||||||||||  ||||||||    
T  7262 gcactatcataatgcacagaaaa 7240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 47; Significance: 2e-17; HSPs: 2)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 81 - 167
Target Start/End: Original strand, 5107 - 5193
Alignment:
Q  81 caactcaagaactcattagaccctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacactt 167  Q
    |||| ||||| ||||||||||||||||||||||||||| |||||| |||||| | | ||||  | ||||||||||||||||||||||    
T  5107 caacgcaagatctcattagaccctttatacaaagttatctctttcataaaaatagccctagatgattaggataaagtccctacactt 5193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 282 - 388
Target Start/End: Original strand, 5372 - 5479
Alignment:
Q  282 agacatcatcagatttt-caacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactctta 380  Q
    ||||| ||||||||||| |||  ||||||||||||| |||||||| ||||| ||||| | |||||| | ||||||||  ||| |||||||||||| ||||    
T  5372 agacaacatcagatttttcaattttcacgttttcgcgcataaaaaccaaaccgttaacccgttttcaatgccgtttttgcctacatgttcctgacactta 5471  T
Q  381 gccctatc 388  Q
    || |||||    
T  5472 gctctatc 5479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 46; Significance: 9e-17; HSPs: 6)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 304 - 416
Target Start/End: Original strand, 4021 - 4134
Alignment:
Q  304 ttcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacag-aaa 402  Q
    ||||||||||||| | |||||| ||||| ||||| | |||||||| ||||||||| ||| || | || |||| |||||||||||| |||| ||||| |||    
T  4021 ttcacgttttcgcgcgtaaaaaccaaaccgttaacccgttttcgatgccgttttcgcctacacgctcttgacacttagccctatcttaatgtacagaaaa 4120  T
Q  403 attcaagtttcaac 416  Q
    ||||||||||||||    
T  4121 attcaagtttcaac 4134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #2
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 304 - 416
Target Start/End: Original strand, 8635 - 8748
Alignment:
Q  304 ttcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacag-aaa 402  Q
    ||||||||||||| | |||||| ||||| ||||| | |||||||| ||||||||| ||| || | || |||| |||||||||||| |||| ||||| |||    
T  8635 ttcacgttttcgcgcgtaaaaaccaaaccgttaacccgttttcgatgccgttttcgcctacacgctcttgacacttagccctatcttaatgtacagaaaa 8734  T
Q  403 attcaagtttcaac 416  Q
    ||||||||||||||    
T  8735 attcaagtttcaac 8748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 437 - 492
Target Start/End: Original strand, 7610 - 7665
Alignment:
Q  437 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagc 492  Q
    ||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||    
T  7610 ccaaacctcacataatctcttgtttgcaaaaacgtttagactccgacttttcaagc 7665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 437 - 492
Target Start/End: Original strand, 12224 - 12279
Alignment:
Q  437 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagc 492  Q
    ||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||    
T  12224 ccaaacctcacataatctcttgtttgcaaaaacgtttagactccgacttttcaagc 12279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 205
Target Start/End: Original strand, 3754 - 3855
Alignment:
Q  104 tttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaa 203  Q
    |||| |||| |||| || |||| |||||||| | ||||  | |||||||||||||||||||||||  || |||||||||| ||||| |  ||||||||||    
T  3754 tttacacaaggttaattgtttcataaaaacacccctagatgattaggataaagtccctacacttagaaataagtttggaaacaatttggttgaagaaaaa 3853  T
Q  204 tg 205  Q
    ||    
T  3854 tg 3855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 205
Target Start/End: Original strand, 8368 - 8469
Alignment:
Q  104 tttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaa 203  Q
    |||| |||| |||| || |||| |||||||| | ||||  | |||||||||||||||||||||||  || |||||||||| ||||| |  ||||||||||    
T  8368 tttacacaaggttaattgtttcataaaaacacccctagatgattaggataaagtccctacacttagaaataagtttggaaacaatttggttgaagaaaaa 8467  T
Q  204 tg 205  Q
    ||    
T  8468 tg 8469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 46; Significance: 9e-17; HSPs: 3)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 304 - 416
Target Start/End: Original strand, 6629 - 6742
Alignment:
Q  304 ttcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacag-aaa 402  Q
    ||||||||||||| | |||||| ||||| ||||| | |||||||| ||||||||| ||| || | || |||| |||||||||||| |||| ||||| |||    
T  6629 ttcacgttttcgcgcgtaaaaaccaaaccgttaacccgttttcgatgccgttttcgcctacacgctcttgacacttagccctatcttaatgtacagaaaa 6728  T
Q  403 attcaagtttcaac 416  Q
    ||||||||||||||    
T  6729 attcaagtttcaac 6742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 437 - 492
Target Start/End: Original strand, 10219 - 10274
Alignment:
Q  437 ccaaacctcacataatcccttatttgcaaaaacgtttagacaccgacttttcaagc 492  Q
    ||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||    
T  10219 ccaaacctcacataatctcttgtttgcaaaaacgtttagactccgacttttcaagc 10274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 205
Target Start/End: Original strand, 6362 - 6463
Alignment:
Q  104 tttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaa 203  Q
    |||| |||| |||| || |||| |||||||| | ||||  | |||||||||||||||||||||||  || |||||||||| ||||| |  ||||||||||    
T  6362 tttacacaaggttaattgtttcataaaaacacccctagatgattaggataaagtccctacacttagaaataagtttggaaacaatttggttgaagaaaaa 6461  T
Q  204 tg 205  Q
    ||    
T  6462 tg 6463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 46; Significance: 9e-17; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 304 - 416
Target Start/End: Original strand, 55035 - 55148
Alignment:
Q  304 ttcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacag-aaa 402  Q
    ||||||||||||| |||||||||||||| |||||||||||| ||| ||||||||||||| | | ||| |||| ||| ||||||||  | | || || |||    
T  55035 ttcacgttttcgcgcataaaaatcaaaccgttaatctgtttccgatgccgttttcacctacgttttcatgacacttggccctatctcagtgtaaagaaaa 55134  T
Q  403 attcaagtttcaac 416  Q
    ||||||||||||||    
T  55135 attcaagtttcaac 55148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 223
Target Start/End: Original strand, 54690 - 54804
Alignment:
Q  109 acaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatgtct 208  Q
    |||| |||| ||||||| |||||||| |  |||  | ||||||||||||||||||||||| |||||||||||||| |||||| |  |||||||| ||  |    
T  54690 acaaggttaattctttcataaaaacacccatagatgattaggataaagtccctacacttaggaagaagtttggaaccaattgcaacgaagaaaattgcat 54789  T
Q  209 ttttaaggtttctag 223  Q
    ||||  |||||||||    
T  54790 ttttggggtttctag 54804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 103 - 205
Target Start/End: Original strand, 146758 - 146860
Alignment:
Q  103 ctttatacaaagttatttctttcctaaaaacatctctagtcggttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaa 202  Q
    ||||| |||| |||| ||||||| ||||| || | ||||  ||||||||||||||||||||||||| ||| |||||||||| ||||| |  |||||||||    
T  146758 ctttacacaaggttaattctttcataaaagcacccctagatggttaggataaagtccctacacttaggaataagtttggaaacaatttggttgaagaaaa 146857  T
Q  203 atg 205  Q
    |||    
T  146858 atg 146860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 282 - 370
Target Start/End: Original strand, 147002 - 147091
Alignment:
Q  282 agacatcatcagattttc-aacattcacgttttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttc 370  Q
    ||||| |||||||||||| ||  ||||||||||||| | |||||  ||||  ||||| | |||||||| ||||||||||||| |||||||    
T  147002 agacaacatcagattttccaattttcacgttttcgcacgtaaaatccaaatcgttaacccgttttcgatgccgttttcacctacatgttc 147091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0637 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0637
Description:

Target: scaffold0637; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 555 - 612
Target Start/End: Original strand, 8943 - 9000
Alignment:
Q  555 ctgtttgaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    ||||| |||||||||| |||||||||||||| |||| |||||||||||||||||||||    
T  8943 ctgttggaataagcccaaatagccaatctatgttgaatgggtttggctttgtatcatg 9000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 219
Target Start/End: Original strand, 12654 - 12727
Alignment:
Q  146 ttaggataaagtccctacacttatgaagaagtttggaagcaattggagtgaagaaaaatgtctttttaaggttt 219  Q
    ||||||| ||||||||||||||| ||| |||||| ||| |||||||| ||||||||||||  ||||||||||||    
T  12654 ttaggatgaagtccctacacttaggaataagtttagaaacaattggattgaagaaaaatgcatttttaaggttt 12727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0705 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0705
Description:

Target: scaffold0705; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 556 - 612
Target Start/End: Complemental strand, 97 - 41
Alignment:
Q  556 tgtttgaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    |||| |||||||||||||||||||||||||| ||||||  |||||||||||||||||    
T  97 tgttggaataagccctaatagccaatctataatgattgattttggctttgtatcatg 41  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 37; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 564 - 612
Target Start/End: Complemental strand, 10250 - 10202
Alignment:
Q  564 taagccctaatagccaatctatattgattgggtttggctttgtatcatg 612  Q
    ||||| |||||||||||||||||||||||| ||||| ||||||||||||    
T  10250 taagctctaatagccaatctatattgattgagtttgactttgtatcatg 10202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 667 - 698
Target Start/End: Complemental strand, 10158 - 10127
Alignment:
Q  667 attttgttttgtttcaaaataataaagtccct 698  Q
    ||||||||||||||||||||||||||||||||    
T  10158 attttgttttgtttcaaaataataaagtccct 10127  T

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Target: scaffold0125 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 311 - 418
Target Start/End: Original strand, 28182 - 28289
Alignment:
Q  311 tttcgctcataaaaatcaaacagttaatctgttttcgacgccgttttcacctgcatgttcctgactcttagccctatcataatctacagaaaattcaagt 410  Q
    |||||| ||||||| |||||| ||||||| | |||  | ||||||||| ||| |||| ||||||| |||| | ||||||||||||||||| | || ||||    
T  28182 tttcgcgcataaaattcaaaccgttaatcggattttaatgccgttttcgcctacatgctcctgacacttaactctatcataatctacagagatttaaagt 28281  T
Q  411 ttcaacca 418  Q
     |||||||    
T  28282 ctcaacca 28289  T

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Target: scaffold0767 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 554 - 592
Target Start/End: Complemental strand, 39 - 1
Alignment:
Q  554 actgtttgaataagccctaatagccaatctatattgatt 592  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  39 actgttggaataagccctaatagccaatctatattgatt 1  T

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Target: scaffold0737 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 471 - 514
Target Start/End: Complemental strand, 6079 - 6036
Alignment:
Q  471 tttagacaccgacttttcaagcgaaaatcccaattttcatcaac 514  Q
    |||||||||| ||||||||| ||||||||||||| |||||||||    
T  6079 tttagacaccaacttttcaaacgaaaatcccaatcttcatcaac 6036  T

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Target: scaffold0170 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 571 - 608
Target Start/End: Original strand, 5893 - 5930
Alignment:
Q  571 taatagccaatctatattgattgggtttggctttgtat 608  Q
    ||||||||||||||||||||||| ||||| ||||||||    
T  5893 taatagccaatctatattgattgagtttgactttgtat 5930  T

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