View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15449_low_35 (Length: 308)

Name: NF15449_low_35
Description: NF15449
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15449_low_35
NF15449_low_35
[»] chr5 (59 HSPs)
chr5 (1-304)||(7907871-7908175)
chr5 (3-116)||(2568650-2568762)
chr5 (12-148)||(17258817-17258952)
chr5 (3-70)||(10272442-10272509)
chr5 (3-146)||(34975356-34975498)
chr5 (1-166)||(16937799-16937963)
chr5 (11-140)||(12459943-12460071)
chr5 (17-122)||(37611175-37611279)
chr5 (17-122)||(37787905-37788009)
chr5 (11-103)||(17368676-17368767)
chr5 (4-68)||(18543210-18543273)
chr5 (12-74)||(4014431-4014493)
chr5 (86-148)||(13244485-13244547)
chr5 (11-77)||(33533543-33533609)
chr5 (36-157)||(10125643-10125763)
chr5 (1-70)||(36318764-36318833)
chr5 (1-70)||(36326001-36326070)
chr5 (4-117)||(37526164-37526276)
chr5 (4-117)||(37588325-37588437)
chr5 (11-71)||(11707055-11707115)
chr5 (3-71)||(12425563-12425631)
chr5 (18-117)||(7674655-7674753)
chr5 (33-140)||(8089958-8090064)
chr5 (17-68)||(12242723-12242774)
chr5 (18-72)||(7319017-7319071)
chr5 (11-122)||(18857358-18857470)
chr5 (1-63)||(25461081-25461143)
chr5 (94-148)||(35095721-35095774)
chr5 (38-148)||(41112832-41112941)
chr5 (6-72)||(41957460-41957526)
chr5 (2-63)||(6593290-6593351)
chr5 (110-163)||(36542205-36542258)
chr5 (1-73)||(1465028-1465099)
chr5 (3-111)||(6587078-6587185)
chr5 (4-72)||(12975340-12975407)
chr5 (11-103)||(17827524-17827615)
chr5 (4-148)||(32172646-32172789)
chr5 (4-72)||(32194088-32194156)
chr5 (11-78)||(3237093-3237160)
chr5 (11-74)||(7984969-7985032)
chr5 (7-70)||(29659347-29659410)
chr5 (4-63)||(31030148-31030207)
chr5 (4-51)||(34117566-34117613)
chr5 (11-62)||(43300878-43300929)
chr5 (90-148)||(1961993-1962051)
chr5 (12-126)||(3977309-3977422)
chr5 (6-64)||(6183439-6183497)
chr5 (18-72)||(36639529-36639583)
chr5 (25-71)||(38104867-38104913)
chr5 (10-130)||(1916246-1916362)
chr5 (7-72)||(18875357-18875422)
chr5 (11-72)||(31694518-31694579)
chr5 (4-57)||(34245717-34245770)
chr5 (5-70)||(39594801-39594866)
chr5 (36-72)||(8177541-8177577)
chr5 (88-164)||(11095413-11095489)
chr5 (10-62)||(11700162-11700214)
chr5 (11-110)||(29925841-29925940)
chr5 (13-65)||(40205090-40205142)
[»] chr7 (40 HSPs)
chr7 (9-166)||(24363516-24363673)
chr7 (11-117)||(19022549-19022655)
chr7 (18-147)||(7244687-7244816)
chr7 (1-166)||(34744018-34744182)
chr7 (11-164)||(30535563-30535715)
chr7 (4-146)||(25670522-25670663)
chr7 (1-71)||(44821949-44822019)
chr7 (1-161)||(752959-753118)
chr7 (36-140)||(23214880-23214983)
chr7 (47-147)||(24967097-24967196)
chr7 (4-165)||(46082027-46082189)
chr7 (13-65)||(48917362-48917414)
chr7 (54-129)||(36537951-36538025)
chr7 (11-148)||(2825170-2825301)
chr7 (20-70)||(25596042-25596092)
chr7 (4-65)||(18965726-18965787)
chr7 (11-120)||(48470044-48470153)
chr7 (18-74)||(529382-529438)
chr7 (25-129)||(43250653-43250755)
chr7 (4-72)||(44151489-44151557)
chr7 (18-129)||(9038119-9038228)
chr7 (3-50)||(18350738-18350785)
chr7 (18-73)||(27378836-27378891)
chr7 (1-108)||(28614423-28614530)
chr7 (4-51)||(30456480-30456527)
chr7 (11-74)||(33601417-33601479)
chr7 (90-129)||(48131415-48131454)
chr7 (119-161)||(2895343-2895385)
chr7 (1-63)||(17944361-17944423)
chr7 (39-81)||(26935557-26935599)
chr7 (6-48)||(32210262-32210304)
chr7 (10-64)||(47130802-47130856)
chr7 (13-74)||(9423601-9423662)
chr7 (20-65)||(12792579-12792624)
chr7 (4-65)||(46104583-46104644)
chr7 (96-148)||(5288195-5288247)
chr7 (17-108)||(11619131-11619222)
chr7 (4-72)||(15075094-15075162)
chr7 (17-117)||(21568459-21568559)
chr7 (11-103)||(39967920-39968012)
[»] chr1 (81 HSPs)
chr1 (4-148)||(31517674-31517817)
chr1 (1-148)||(7136932-7137078)
chr1 (20-148)||(10199342-10199469)
chr1 (1-77)||(34290226-34290302)
chr1 (35-148)||(6292517-6292628)
chr1 (25-148)||(32515375-32515497)
chr1 (1-117)||(49938737-49938853)
chr1 (1-117)||(2777882-2777997)
chr1 (4-72)||(23902076-23902144)
chr1 (11-74)||(25479581-25479644)
chr1 (4-72)||(28689461-28689531)
chr1 (25-148)||(37593618-37593740)
chr1 (11-74)||(38503472-38503535)
chr1 (1-76)||(45975680-45975755)
chr1 (108-166)||(6231732-6231790)
chr1 (19-140)||(19389909-19390030)
chr1 (5-103)||(37842334-37842431)
chr1 (3-117)||(51695459-51695573)
chr1 (4-129)||(7218027-7218151)
chr1 (11-72)||(26779934-26779995)
chr1 (11-72)||(27140478-27140539)
chr1 (1-74)||(35590899-35590972)
chr1 (25-74)||(46252689-46252738)
chr1 (1-117)||(3233979-3234095)
chr1 (1-65)||(7472301-7472365)
chr1 (11-71)||(12564509-12564569)
chr1 (1-65)||(43332474-43332538)
chr1 (7-74)||(5887001-5887068)
chr1 (4-74)||(14629973-14630043)
chr1 (36-74)||(15361065-15361103)
chr1 (86-148)||(24313610-24313672)
chr1 (1-74)||(1510317-1510390)
chr1 (3-68)||(4700079-4700144)
chr1 (4-72)||(5592694-5592762)
chr1 (1-74)||(24915058-24915131)
chr1 (4-167)||(37241736-37241899)
chr1 (33-149)||(4768762-4768877)
chr1 (12-72)||(12593462-12593522)
chr1 (2-74)||(27820344-27820416)
chr1 (12-72)||(47598430-47598490)
chr1 (11-74)||(219558-219621)
chr1 (7-70)||(4548717-4548780)
chr1 (11-74)||(10744301-10744364)
chr1 (12-127)||(17269251-17269365)
chr1 (86-165)||(17420277-17420355)
chr1 (86-161)||(18327067-18327142)
chr1 (18-81)||(28077069-28077132)
chr1 (53-148)||(40413956-40414050)
chr1 (54-129)||(42757130-42757204)
chr1 (11-74)||(51688705-51688767)
chr1 (15-101)||(3924628-3924713)
chr1 (86-148)||(4757412-4757474)
chr1 (4-46)||(5421955-5421997)
chr1 (90-128)||(8810080-8810118)
chr1 (86-140)||(15581328-15581382)
chr1 (86-140)||(28348729-28348783)
chr1 (3-65)||(29793774-29793836)
chr1 (18-72)||(35017583-35017637)
chr1 (6-72)||(35179134-35179200)
chr1 (39-125)||(38170647-38170732)
chr1 (1-122)||(38578517-38578638)
chr1 (90-167)||(4033932-4034009)
chr1 (33-74)||(8016279-8016320)
chr1 (7-72)||(16322845-16322910)
chr1 (7-72)||(27963379-27963444)
chr1 (4-77)||(28482237-28482310)
chr1 (41-166)||(33723298-33723422)
chr1 (86-163)||(36070255-36070332)
chr1 (13-70)||(38116089-38116146)
chr1 (1-74)||(38247060-38247133)
chr1 (1-74)||(38882919-38882991)
chr1 (11-72)||(39347976-39348037)
chr1 (1-62)||(39596587-39596648)
chr1 (1-74)||(42174845-42174918)
chr1 (36-73)||(47877134-47877171)
chr1 (4-72)||(4622086-4622154)
chr1 (1-65)||(10809335-10809399)
chr1 (4-72)||(12564883-12564951)
chr1 (1-73)||(15558207-15558279)
chr1 (4-72)||(27887127-27887195)
chr1 (4-72)||(30371141-30371209)
[»] chr4 (70 HSPs)
chr4 (11-148)||(28615334-28615470)
chr4 (4-130)||(2996566-2996691)
chr4 (7-117)||(52315161-52315271)
chr4 (1-74)||(17884058-17884131)
chr4 (4-148)||(18628487-18628620)
chr4 (14-137)||(4798511-4798633)
chr4 (4-70)||(16494816-16494882)
chr4 (11-165)||(21731573-21731726)
chr4 (8-148)||(42641573-42641714)
chr4 (93-147)||(51555705-51555759)
chr4 (18-72)||(53673667-53673721)
chr4 (1-74)||(7694017-7694090)
chr4 (4-164)||(42866061-42866220)
chr4 (11-74)||(17822872-17822935)
chr4 (39-162)||(32831438-32831559)
chr4 (4-63)||(36722687-36722746)
chr4 (3-74)||(49202637-49202708)
chr4 (4-70)||(10192277-10192342)
chr4 (7-65)||(11158373-11158431)
chr4 (12-74)||(29263371-29263433)
chr4 (38-148)||(33534103-33534212)
chr4 (20-74)||(40532601-40532655)
chr4 (20-74)||(47145971-47146025)
chr4 (95-148)||(1017111-1017164)
chr4 (38-127)||(1137739-1137827)
chr4 (4-117)||(23819082-23819194)
chr4 (14-63)||(30668384-30668433)
chr4 (55-148)||(37575870-37575962)
chr4 (11-64)||(47800623-47800676)
chr4 (13-74)||(55084488-55084549)
chr4 (2-51)||(56480339-56480388)
chr4 (10-66)||(1404416-1404472)
chr4 (4-48)||(27970051-27970095)
chr4 (4-72)||(49219132-49219200)
chr4 (5-72)||(11802528-11802595)
chr4 (88-139)||(22471350-22471401)
chr4 (89-148)||(25487491-25487550)
chr4 (87-161)||(8328040-8328114)
chr4 (12-70)||(17975380-17975438)
chr4 (99-141)||(22772417-22772459)
chr4 (86-148)||(24087410-24087472)
chr4 (86-148)||(24091537-24091599)
chr4 (43-109)||(25332807-25332873)
chr4 (11-125)||(27721717-27721830)
chr4 (1-103)||(28300278-28300379)
chr4 (4-70)||(30207582-30207648)
chr4 (89-139)||(39178209-39178259)
chr4 (4-74)||(43824276-43824346)
chr4 (13-163)||(46019548-46019697)
chr4 (38-100)||(46110230-46110291)
chr4 (7-148)||(46415725-46415866)
chr4 (4-126)||(50799986-50800106)
chr4 (33-71)||(53792593-53792631)
chr4 (25-70)||(2592320-2592365)
chr4 (27-72)||(5131259-5131304)
chr4 (25-70)||(14011248-14011293)
chr4 (26-63)||(30377433-30377470)
chr4 (11-72)||(34398694-34398755)
chr4 (11-80)||(35405947-35406016)
chr4 (4-66)||(44638187-44638250)
chr4 (39-164)||(51560207-51560331)
chr4 (90-158)||(3549479-3549547)
chr4 (4-72)||(8468941-8469009)
chr4 (18-74)||(24169270-24169326)
chr4 (93-137)||(24718746-24718790)
chr4 (2-62)||(42121479-42121539)
chr4 (88-164)||(42641416-42641492)
chr4 (11-47)||(44797886-44797922)
chr4 (18-74)||(49803215-49803271)
chr4 (11-63)||(52259631-52259683)
[»] chr6 (41 HSPs)
chr6 (17-141)||(10031738-10031861)
chr6 (1-109)||(20368153-20368260)
chr6 (1-148)||(35070401-35070547)
chr6 (1-58)||(31812036-31812093)
chr6 (4-109)||(4006707-4006811)
chr6 (4-116)||(34910374-34910486)
chr6 (4-72)||(2160946-2161014)
chr6 (86-154)||(27857432-27857500)
chr6 (6-106)||(31624085-31624184)
chr6 (1-73)||(34430469-34430541)
chr6 (1-128)||(769129-769254)
chr6 (4-74)||(6647380-6647450)
chr6 (3-65)||(9093572-9093634)
chr6 (86-148)||(26559173-26559235)
chr6 (120-166)||(31672445-31672491)
chr6 (13-74)||(4420645-4420706)
chr6 (4-65)||(33787761-33787822)
chr6 (9-65)||(5564144-5564200)
chr6 (1-72)||(29296304-29296373)
chr6 (41-105)||(31420975-31421038)
chr6 (93-157)||(34429639-34429703)
chr6 (3-74)||(415296-415367)
chr6 (34-129)||(30863269-30863363)
chr6 (19-65)||(835265-835311)
chr6 (36-146)||(7945820-7945929)
chr6 (90-148)||(31774455-31774513)
chr6 (4-66)||(32386578-32386640)
chr6 (12-134)||(34403856-34403977)
chr6 (6-63)||(837234-837291)
chr6 (8-65)||(1497978-1498035)
chr6 (107-148)||(7351605-7351646)
chr6 (39-72)||(9027606-9027639)
chr6 (3-64)||(26694870-26694931)
chr6 (19-72)||(27909647-27909700)
chr6 (11-72)||(32386115-32386176)
chr6 (3-71)||(1401101-1401169)
chr6 (17-61)||(2205610-2205654)
chr6 (11-103)||(2455259-2455351)
chr6 (113-165)||(4325222-4325274)
chr6 (1-61)||(6909892-6909952)
chr6 (35-71)||(7785754-7785790)
[»] chr2 (76 HSPs)
chr2 (90-165)||(41170688-41170763)
chr2 (18-148)||(8017441-8017570)
chr2 (3-161)||(40158710-40158867)
chr2 (25-134)||(12313121-12313229)
chr2 (25-157)||(33192216-33192346)
chr2 (18-74)||(35379023-35379079)
chr2 (3-74)||(1625892-1625963)
chr2 (1-164)||(33941899-33942058)
chr2 (25-126)||(43199740-43199840)
chr2 (3-63)||(43985021-43985081)
chr2 (11-77)||(16867739-16867805)
chr2 (88-146)||(40776033-40776091)
chr2 (20-81)||(44443330-44443391)
chr2 (33-129)||(5902502-5902597)
chr2 (4-148)||(14666541-14666684)
chr2 (35-111)||(28677630-28677705)
chr2 (4-56)||(36863650-36863702)
chr2 (93-165)||(44064517-44064589)
chr2 (43-111)||(44606081-44606148)
chr2 (88-163)||(4350766-4350841)
chr2 (3-62)||(9477944-9478003)
chr2 (11-74)||(38078417-38078480)
chr2 (3-74)||(43911006-43911077)
chr2 (1-63)||(1810655-1810716)
chr2 (18-128)||(8187407-8187516)
chr2 (90-148)||(29430836-29430894)
chr2 (1-120)||(2142643-2142763)
chr2 (33-74)||(7928306-7928347)
chr2 (1-74)||(29628750-29628823)
chr2 (1-74)||(41851525-41851598)
chr2 (5-66)||(44590028-44590089)
chr2 (3-71)||(656787-656855)
chr2 (4-148)||(14299565-14299708)
chr2 (17-73)||(15977991-15978047)
chr2 (11-71)||(18840796-18840856)
chr2 (11-63)||(29510592-29510644)
chr2 (4-140)||(35485910-35486045)
chr2 (33-101)||(36043926-36043994)
chr2 (3-63)||(40279189-40279249)
chr2 (11-74)||(9174815-9174878)
chr2 (88-163)||(11513972-11514047)
chr2 (17-140)||(15120189-15120311)
chr2 (41-140)||(16551782-16551880)
chr2 (11-74)||(29316782-29316845)
chr2 (4-63)||(39983335-39983394)
chr2 (12-99)||(40279268-40279355)
chr2 (12-99)||(40279338-40279425)
chr2 (12-70)||(3078651-3078709)
chr2 (11-73)||(6772528-6772590)
chr2 (6-72)||(10563567-10563633)
chr2 (11-73)||(11488277-11488339)
chr2 (86-140)||(12140606-12140660)
chr2 (86-148)||(13866952-13867014)
chr2 (1-63)||(14364197-14364259)
chr2 (86-140)||(40145526-40145580)
chr2 (27-129)||(41809198-41809299)
chr2 (14-95)||(1056116-1056196)
chr2 (43-76)||(1493518-1493551)
chr2 (12-73)||(7871644-7871705)
chr2 (9-78)||(12289795-12289864)
chr2 (35-84)||(19333322-19333371)
chr2 (33-74)||(35378539-35378580)
chr2 (12-77)||(39236499-39236564)
chr2 (12-65)||(40279408-40279461)
chr2 (88-165)||(40400817-40400894)
chr2 (14-99)||(43065433-43065517)
chr2 (88-161)||(43530032-43530105)
chr2 (17-73)||(3227691-3227747)
chr2 (11-71)||(6227751-6227811)
chr2 (1-37)||(7751485-7751521)
chr2 (20-72)||(9530737-9530789)
chr2 (16-64)||(24097813-24097861)
chr2 (1-109)||(32592576-32592684)
chr2 (6-74)||(33942145-33942213)
chr2 (20-72)||(34652045-34652097)
chr2 (94-146)||(34927045-34927097)
[»] chr8 (53 HSPs)
chr8 (4-74)||(9956821-9956891)
chr8 (39-148)||(6950350-6950458)
chr8 (86-163)||(2487927-2488004)
chr8 (88-165)||(16162836-16162913)
chr8 (2-74)||(27028822-27028894)
chr8 (6-165)||(7918699-7918848)
chr8 (1-148)||(34849093-34849240)
chr8 (11-129)||(7714242-7714359)
chr8 (20-74)||(42215089-42215143)
chr8 (11-128)||(778389-778505)
chr8 (18-74)||(20672757-20672813)
chr8 (4-72)||(28769348-28769416)
chr8 (14-74)||(30918116-30918176)
chr8 (5-73)||(43717945-43718013)
chr8 (93-148)||(1664450-1664505)
chr8 (1-72)||(8062319-8062390)
chr8 (18-116)||(779027-779124)
chr8 (4-74)||(30389092-30389162)
chr8 (18-148)||(44236757-44236886)
chr8 (14-71)||(4762512-4762569)
chr8 (11-72)||(11569466-11569527)
chr8 (3-72)||(31862485-31862554)
chr8 (3-72)||(38421256-38421325)
chr8 (11-140)||(43504751-43504879)
chr8 (10-74)||(1930034-1930098)
chr8 (11-71)||(11745662-11745722)
chr8 (11-71)||(27754404-27754464)
chr8 (4-72)||(31705078-31705146)
chr8 (4-68)||(31804467-31804531)
chr8 (1-73)||(38648341-38648413)
chr8 (93-148)||(1892158-1892213)
chr8 (17-129)||(12851182-12851295)
chr8 (11-74)||(33714243-33714306)
chr8 (12-74)||(2595004-2595066)
chr8 (94-148)||(4560584-4560638)
chr8 (4-74)||(5069690-5069760)
chr8 (14-116)||(7918412-7918513)
chr8 (4-74)||(8060662-8060732)
chr8 (28-74)||(21653098-21653144)
chr8 (11-77)||(37353253-37353319)
chr8 (6-63)||(6864477-6864534)
chr8 (20-73)||(11494155-11494208)
chr8 (4-65)||(11795085-11795146)
chr8 (94-143)||(13652298-13652347)
chr8 (94-143)||(13710941-13710990)
chr8 (11-148)||(30191075-30191211)
chr8 (11-72)||(30277254-30277315)
chr8 (11-148)||(39551143-39551279)
chr8 (88-156)||(2213484-2213552)
chr8 (10-74)||(11185220-11185284)
chr8 (1-65)||(36338278-36338342)
chr8 (1-65)||(38036128-38036192)
chr8 (12-64)||(39881769-39881821)
[»] chr3 (61 HSPs)
chr3 (18-139)||(30573857-30573977)
chr3 (4-140)||(43115049-43115184)
chr3 (101-164)||(30657375-30657438)
chr3 (3-109)||(39602183-39602288)
chr3 (11-111)||(21367667-21367767)
chr3 (1-74)||(40665419-40665492)
chr3 (88-165)||(44014715-44014792)
chr3 (36-148)||(24281072-24281183)
chr3 (3-74)||(402549-402620)
chr3 (4-123)||(14548680-14548798)
chr3 (13-116)||(54837000-54837102)
chr3 (1-103)||(1816573-1816674)
chr3 (90-148)||(41848650-41848708)
chr3 (1-58)||(18405854-18405911)
chr3 (1-74)||(34610813-34610886)
chr3 (3-128)||(45541563-45541687)
chr3 (1-72)||(2719458-2719529)
chr3 (11-74)||(20669172-20669235)
chr3 (11-74)||(25776117-25776180)
chr3 (11-74)||(33883757-33883820)
chr3 (11-74)||(36887504-36887567)
chr3 (18-117)||(37273141-37273239)
chr3 (10-113)||(51130749-51130851)
chr3 (11-74)||(53789468-53789531)
chr3 (6-72)||(1217809-1217875)
chr3 (4-164)||(11253495-11253653)
chr3 (96-164)||(25459548-25459616)
chr3 (3-71)||(34382934-34383002)
chr3 (20-72)||(34924547-34924599)
chr3 (33-113)||(47249455-47249534)
chr3 (28-124)||(47513670-47513765)
chr3 (11-74)||(39980729-39980792)
chr3 (12-71)||(41633361-41633420)
chr3 (41-148)||(42745068-42745174)
chr3 (119-166)||(44237524-44237571)
chr3 (4-163)||(48286729-48286887)
chr3 (13-63)||(2825149-2825199)
chr3 (1-51)||(22203420-22203470)
chr3 (5-103)||(24085316-24085414)
chr3 (86-140)||(50211809-50211863)
chr3 (5-111)||(50600149-50600254)
chr3 (4-74)||(52618996-52619066)
chr3 (4-69)||(1125778-1125843)
chr3 (36-117)||(21574515-21574595)
chr3 (1-74)||(24785195-24785268)
chr3 (11-72)||(25185985-25186046)
chr3 (1-117)||(30443883-30443999)
chr3 (91-164)||(35903085-35903158)
chr3 (107-148)||(40665514-40665555)
chr3 (4-73)||(44061032-44061100)
chr3 (35-72)||(48991875-48991912)
chr3 (2-46)||(2100190-2100234)
chr3 (20-72)||(16790387-16790439)
chr3 (28-72)||(21862184-21862228)
chr3 (4-72)||(23785248-23785316)
chr3 (96-148)||(25447625-25447677)
chr3 (41-157)||(26330248-26330363)
chr3 (36-72)||(34414793-34414829)
chr3 (86-138)||(48397651-48397703)
chr3 (88-148)||(49465599-49465659)
chr3 (83-143)||(50015957-50016017)
[»] scaffold0286 (1 HSPs)
scaffold0286 (4-72)||(16103-16171)
[»] scaffold0199 (1 HSPs)
scaffold0199 (93-148)||(6891-6946)
[»] scaffold0141 (1 HSPs)
scaffold0141 (86-148)||(9712-9774)
[»] scaffold0147 (1 HSPs)
scaffold0147 (25-74)||(4942-4991)
[»] scaffold0064 (1 HSPs)
scaffold0064 (100-165)||(53758-53823)
[»] scaffold0003 (1 HSPs)
scaffold0003 (14-72)||(306329-306387)


Alignment Details
Target: chr5 (Bit Score: 285; Significance: 1e-160; HSPs: 59)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 1 - 304
Target Start/End: Original strand, 7907871 - 7908175
Alignment:
Q  1 ttgtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7907871 ttgtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagt 7907970  T
Q  101 tcttccaaacaatctcataagtgtttatgttagtagataaactcaaatgaaccaattcaaacaggttctcatttgggatcccttggatactgattaattt 200  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7907971 tcttccaaacagtctcataagtgtttatgttattagataaactcaaatgaaccaattcaaacaggttctcatttgggatcccttggatactgattaattt 7908070  T
Q  201 tcttctggaacagtggaggtatcccacattgctttccacagtttggtcctggtgcaattcagcaggtatgttccttcattc-atgttattttcttgcagg 299  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |    
T  7908071 tcttctggaacagtggaggtatcccacattgctttccacagtttggtcctggtgcaattcagcaggtatgttccttcattcaatgttattttcttgcaag 7908170  T
Q  300 ttcat 304  Q
    |||||    
T  7908171 ttcat 7908175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 3 - 116
Target Start/End: Original strand, 2568650 - 2568762
Alignment:
Q  3 gtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttc 102  Q
    ||||||| ||||||||||||| ||||||| || ||||||||| |||||| |||||| |||| ||||||||||||| ||| || | |||||||||||||||    
T  2568650 gtataagctataagttgttttcataagctatcatggagagctaatgaaaataagctaaaaataacttatgaatatgtca-taagctgttttcataagttc 2568748  T
Q  103 ttccaaacaatctc 116  Q
    ||| ||||| ||||    
T  2568749 ttctaaacagtctc 2568762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 148
Target Start/End: Complemental strand, 17258952 - 17258817
Alignment:
Q  12 ataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaaca 111  Q
    ||||| |||||| |||| || || || ||||||||||||| ||||||||||||| |||||||| || ||| || | | |||||||| ||||| ||||| |    
T  17258952 ataagctgttttcataaactatcctgaagagcttatgaaaataagctgaaaacagcttatgaacatgtca-taagctattttcataggttctcccaaaga 17258854  T
Q  112 atctcataagtgtttatgttagtagataaactcaaat 148  Q
    || ||| ||||| |||||||||| ||||| |||||||    
T  17258853 atgtcacaagtgcttatgttagttgataagctcaaat 17258817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 70
Target Start/End: Complemental strand, 10272509 - 10272442
Alignment:
Q  3 gtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaactta 70  Q
    ||||||| ||||||||||||| ||||||  |||||||||| |||||||| ||||||||||||||||||    
T  10272509 gtataagctataagttgttttcataagccatcttggagagtttatgaaaataagctgaaaacaactta 10272442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 146
Target Start/End: Original strand, 34975356 - 34975498
Alignment:
Q  3 gtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttc 102  Q
    ||||||| ||||| |||||||  |||||| || ||||||||| ||| || |||||||||||| | ||||| |||| ||| |||  |||||  || || ||    
T  34975356 gtataagctataaattgttttcgtaagctatcctggagagctaatggaaataagctgaaaacgatttatggatatgtca-tactatgtttggatgagctc 34975454  T
Q  103 ttccaaacaatctcataagtgtttatgttagtagataaactcaa 146  Q
    || |||||| ||||||||||| |||||||||||||||| |||||    
T  34975455 tttcaaacagtctcataagtgattatgttagtagataagctcaa 34975498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 16937963 - 16937799
Alignment:
Q  1 ttgtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatt-tcagtacgttgttttcataag 99  Q
    ||||||| | ||||||||||||| ||| ||| | ||||||| |||| |||| ||||||||||| | ||||||||  || ||| || | ||||||||||||    
T  16937963 ttgtatatgctataagttgtttttatacgctatattggagaacttaggaaaataagctgaaaaaagcttatgaaatttgtca-taagctgttttcataag 16937865  T
Q  100 ttcttccaaacaatctcataagtgtttatgttagtagataaactcaaatgaaccaattcaaacaggt 166  Q
    |||||||||||| ||||| ||    ||||| |||||||||| ||||||| | ||||| |||||||||    
T  16937864 ttcttccaaacactctcacaa-aacttatgctagtagataagctcaaataagccaatccaaacaggt 16937799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 11 - 140
Target Start/End: Complemental strand, 12460071 - 12459943
Alignment:
Q  11 tataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaac 110  Q
    |||||||||| || | ||||| ||||| ||||||||||||| |||||  |||||||| |||||| || ||| || |||||||||||| ||||| ||||||    
T  12460071 tataagttgtcttcacaagctatcttgcagagcttatgaaaataagccaaaaacaacatatgaacatgtca-taagttgttttcataggttctcccaaac 12459973  T
Q  111 aatctcataagtgtttatgttagtagataa 140  Q
    | ||||| | ||| |||||| || ||||||    
T  12459972 agtctcacaggtgcttatgtcagcagataa 12459943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 17 - 122
Target Start/End: Complemental strand, 37611279 - 37611175
Alignment:
Q  17 ttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaacaatctc 116  Q
    ||||||| ||||||| |||||||||||||||| || ||| ||||||||| |||||||| || |||  | |||||||||||||| |||  |||||||||||    
T  37611279 ttgttttcataagctatcttggagagcttatggaaataacctgaaaacagcttatgaacatgtca-caagttgttttcataagctctctcaaacaatctc 37611181  T
Q  117 ataagt 122  Q
    | ||||    
T  37611180 acaagt 37611175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 17 - 122
Target Start/End: Complemental strand, 37788009 - 37787905
Alignment:
Q  17 ttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaacaatctc 116  Q
    ||||||| ||||||| |||||||||||||||| || ||| ||||||||| |||||||| || |||  | |||||||||||||| |||  |||||||||||    
T  37788009 ttgttttcataagctatcttggagagcttatggaaataacctgaaaacagcttatgaacatgtca-caagttgttttcataagctctctcaaacaatctc 37787911  T
Q  117 ataagt 122  Q
    | ||||    
T  37787910 acaagt 37787905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 103
Target Start/End: Original strand, 17368676 - 17368767
Alignment:
Q  11 tataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttct 103  Q
    ||||||||||||| ||||||| |||||||||| ||||| || ||||||||||||  | |||||| || ||| || ||||||||||||||||||    
T  17368676 tataagttgttttcataagctatcttggagaggttatggaaataagctgaaaactgcatatgaacatgtca-taagttgttttcataagttct 17368767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 18543273 - 18543210
Alignment:
Q  4 tataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaact 68  Q
    |||||| ||||||||||||| ||||||| || |||||||||||||||| ||||||||||||||||    
T  18543273 tataagatataagttgttttcataagctatcctggagagcttatgaaa-taagctgaaaacaact 18543210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 4014493 - 4014431
Alignment:
Q  12 ataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 74  Q
    ||||| |||||| ||||||| ||||||||| ||||||||| ||||||||||||| ||||||||    
T  4014493 ataagctgttttcataagctatcttggagaacttatgaaaataagctgaaaacagcttatgaa 4014431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 86 - 148
Target Start/End: Complemental strand, 13244547 - 13244485
Alignment:
Q  86 gttgttttcataagttcttccaaacaatctcataagtgtttatgttagtagataaactcaaat 148  Q
    |||||||||||||| ||||||||||| | |||||||||||||| | | |||||||||||||||    
T  13244547 gttgttttcataagctcttccaaacagtgtcataagtgtttatttcaatagataaactcaaat 13244485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 11 - 77
Target Start/End: Complemental strand, 33533609 - 33533543
Alignment:
Q  11 tataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatat 77  Q
    |||||| |||||| | ||||| |||||||||||||||| || |||| ||||||||||||||||||||    
T  33533609 tataaggtgttttcacaagctatcttggagagcttatggaaataagttgaaaacaacttatgaatat 33533543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 157
Target Start/End: Complemental strand, 10125763 - 10125643
Alignment:
Q  36 tggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaacaatctcataagtgtttatgttagta 135  Q
    |||||||||||||||| ||||||||||||| ||||| || || ||| || ||||||| ||||||||||  || ||||| ||| ||||| | |||| ||||    
T  10125763 tggagagcttatgaaaataagctgaaaacaccttatcaacatgtca-taagttgtttacataagttctctcagacaatgtcacaagtgctcatgtcagta 10125665  T
Q  136 gataaactcaaatgaaccaatt 157  Q
    ||||| || |||| | ||||||    
T  10125664 gataagcttaaataagccaatt 10125643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 36318764 - 36318833
Alignment:
Q  1 ttgtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaactta 70  Q
    ||||||||||| ||||||||||| ||||||| |||||||||  ||||| || ||||||||||||| ||||    
T  36318764 ttgtataagttttaagttgttttcataagctatcttggagaatttatgtaaataagctgaaaacagctta 36318833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 36326001 - 36326070
Alignment:
Q  1 ttgtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaactta 70  Q
    ||||||||||||||||||| |||  |||||| |||||||||  ||||| || ||||||||||||||||||    
T  36326001 ttgtataagttataagttgctttcgtaagctatcttggagaatttatgtaaataagctgaaaacaactta 36326070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 117
Target Start/End: Complemental strand, 37526276 - 37526164
Alignment:
Q  4 tataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttct 103  Q
    |||||| ||||||||||||| ||||| |||  ||||||||||||| || ||||||||||||| ||||| || || ||| || ||||| |||||||| |||    
T  37526276 tataagctataagttgttttcataagttgttctggagagcttatggaaataagctgaaaacagcttattaacatgtca-taggttgtattcataagctct 37526178  T
Q  104 tccaaacaatctca 117  Q
      |||||| |||||    
T  37526177 ctcaaacagtctca 37526164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 117
Target Start/End: Complemental strand, 37588437 - 37588325
Alignment:
Q  4 tataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttct 103  Q
    |||||| ||||||||||||| ||||| | |  ||||||||||||| || ||||||||||||| ||||| || |||||| || ||||| |||||||| |||    
T  37588437 tataagctataagttgttttcataagttattctggagagcttatggaaataagctgaaaacagcttattaacatttca-taggttgtattcataagctct 37588339  T
Q  104 tccaaacaatctca 117  Q
      |||||| |||||    
T  37588338 ctcaaacagtctca 37588325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 11707055 - 11707115
Alignment:
Q  11 tataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttat 71  Q
    |||||| |||||| ||||||| ||||| ||||||| ||||| |||||||||||||||||||    
T  11707055 tataagctgttttcataagctatcttgtagagcttttgaaaataagctgaaaacaacttat 11707115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 12425563 - 12425631
Alignment:
Q  3 gtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttat 71  Q
    ||||||| |||||| |||||| | ||||| ||||||||| ||||||||| |||| ||||||||||||||    
T  12425563 gtataagctataagctgttttcacaagctatcttggagaacttatgaaaataagttgaaaacaacttat 12425631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 117
Target Start/End: Original strand, 7674655 - 7674753
Alignment:
Q  18 tgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaacaatctca 117  Q
    |||||| ||||||| |||||||||  || ||||| ||||||||||||| ||||| || || ||| || ||||||| ||||||||||||||| || |||||    
T  7674655 tgttttcataagctatcttggagaatttgtgaaaataagctgaaaacaccttataaacatgtca-taagttgtttccataagttcttccaagcagtctca 7674753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 140
Target Start/End: Original strand, 8089958 - 8090064
Alignment:
Q  33 tcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaacaatctcataagtgtttatgtta 132  Q
    ||||| ||||||||||||| ||||||||||||| |||| |||||| ||| || |||||||||||||| |||  |||| | ||||   |||| || |||||    
T  8089958 tcttgaagagcttatgaaaataagctgaaaacagcttaggaatatatca-taagttgttttcataagctctctcaaatagtctcgcgagtgcttgtgtta 8090056  T
Q  133 gtagataa 140  Q
    ||||||||    
T  8090057 gtagataa 8090064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 12242774 - 12242723
Alignment:
Q  17 ttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaact 68  Q
    ||||||| ||||||| |||||||||||||||| || ||||||||||||||||    
T  12242774 ttgttttcataagctatcttggagagcttatggaagtaagctgaaaacaact 12242723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 7319071 - 7319017
Alignment:
Q  18 tgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatg 72  Q
    |||||| ||||||| ||||||||| ||||||||| |||||||| |||||||||||    
T  7319071 tgttttcataagctatcttggagaacttatgaaaataagctgagaacaacttatg 7319017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 122
Target Start/End: Complemental strand, 18857470 - 18857358
Alignment:
Q  11 tataagttgttttgataagctgtcttggagag--cttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaa 108  Q
    |||||| |||||| ||||||||||||||||||   ||||||||||||| | |||||| |||||||| || ||| || | ||||||||||| |||||| ||    
T  18857470 tataagctgttttcataagctgtcttggagaggtgttatgaaattaagttaaaaacagcttatgaacatgtcatta-gctgttttcataaattcttctaa 18857372  T
Q  109 acaatctcataagt 122  Q
     || ||||| ||||    
T  18857371 gcattctcacaagt 18857358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 25461081 - 25461143
Alignment:
Q  1 ttgtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaa 63  Q
    ||||||| ||||||||||||||| ||||||| | ||||||| || |||||| |||||||||||    
T  25461081 ttgtatatgttataagttgttttcataagctctattggagaactgatgaaaataagctgaaaa 25461143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 94 - 148
Target Start/End: Complemental strand, 35095774 - 35095721
Alignment:
Q  94 cataagttcttccaaacaatctcataagtgtttatgttagtagataaactcaaat 148  Q
    |||||| ||||||||||| |||||| ||||||||| |||||||||||||||||||    
T  35095774 cataagctcttccaaacagtctcattagtgtttat-ttagtagataaactcaaat 35095721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 148
Target Start/End: Complemental strand, 41112941 - 41112832
Alignment:
Q  38 gagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaacaatctcataagtgtttatgttagtaga 137  Q
    |||||||||||||| ||||| |||||||  ||| ||| || |||| | | | |||||||||||||| ||| ||||| ||| |||||||||||  ||||||    
T  41112941 gagagcttatgaaaataagccgaaaacagattacgaacatgtcagaa-gctattttcataagttctgccagacaatgtcacaagtgtttatgcaagtaga 41112843  T
Q  138 taaactcaaat 148  Q
    ||| |||||||    
T  41112842 taagctcaaat 41112832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 72
Target Start/End: Complemental strand, 41957526 - 41957460
Alignment:
Q  6 taagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatg 72  Q
    ||||||||||| |||||| ||||||| || | |||| ||||||||| |||| |||||||||||||||    
T  41957526 taagttataagctgttttcataagctatccttgagaacttatgaaaataagatgaaaacaacttatg 41957460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 6593290 - 6593351
Alignment:
Q  2 tgtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaa 63  Q
    |||||| | |||||| ||||||||||||||  ||| |||||||||||||| |||||||||||    
T  6593290 tgtataggctataagctgttttgataagctaccttagagagcttatgaaaataagctgaaaa 6593351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 163
Target Start/End: Complemental strand, 36542258 - 36542205
Alignment:
Q  110 caatctcataagtgtttatgttagtagataaactcaaatgaaccaattcaaaca 163  Q
    |||||||||||||| |||||||||||||||| ||||||  | ||||||||||||    
T  36542258 caatctcataagtgcttatgttagtagataagctcaaacaagccaattcaaaca 36542205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 1465099 - 1465028
Alignment:
Q  1 ttgtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatga 73  Q
    |||| |||| |||||||| |||| ||||||| ||||||||  ||| ||||| |||||||||||||||||||||    
T  1465099 ttgtgtaagctataagttatttt-ataagctatcttggaggacttgtgaaaataagctgaaaacaacttatga 1465028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 6587185 - 6587078
Alignment:
Q  3 gtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttc 102  Q
    ||||||| ||||||||||||| ||||||| |  |||||| ||| ||||| ||||||| ||||| ||||||||  | ||| || | ||||||  |||||||    
T  6587185 gtataagctataagttgttttcataagctatagtggagaacttgtgaaaataagctgtaaacagcttatgaacctgtca-taagctgtttttttaagttc 6587087  T
Q  103 ttccaaaca 111  Q
    |||||||||    
T  6587086 ttccaaaca 6587078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 12975340 - 12975407
Alignment:
Q  4 tataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatg 72  Q
    |||||| |||||| ||| || ||||||| |||||||||||||||| || |||| |||||||||||||||    
T  12975340 tataagctataagctgtgttcataagctatcttggagagcttatggaa-taagttgaaaacaacttatg 12975407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 103
Target Start/End: Original strand, 17827524 - 17827615
Alignment:
Q  11 tataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttct 103  Q
    |||||||||||||  |||||| |||| ||||| ||| |||| ||||||||||| || ||| ||| |||||| || ||||||||| ||||||||    
T  17827524 tataagttgtttttgtaagctatcttagagaggttacgaaaataagctgaaaataatttacgaacatttca-taagttgttttcctaagttct 17827615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 148
Target Start/End: Original strand, 32172646 - 32172789
Alignment:
Q  4 tataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttct 103  Q
    |||||| |||||| |||||| ||||||| || || ||| || ||| || |||||||||||   |||||| | || ||| || ||||||| |||||| |||    
T  32172646 tataagctataagctgttttcataagctatcatgaagaactaatggaaataagctgaaaatggcttatggacatgtca-taagttgtttccataagctct 32172744  T
Q  104 tccaaacaatctcataagtgtttatgttagtagataaactcaaat 148  Q
     |||||| |||||| ||||| ||||| ||||| |||| |||||||    
T  32172745 cccaaactatctcacaagtgcttatgctagtatataagctcaaat 32172789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 32194156 - 32194088
Alignment:
Q  4 tataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatg 72  Q
    |||||| |||||| ||||||  |||||| |||| ||||||||||  || ||||||||||||||||||||    
T  32194156 tataagctataagatgtttttttaagctatctttgagagcttatataaataagctgaaaacaacttatg 32194088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 78
Target Start/End: Original strand, 3237093 - 3237160
Alignment:
Q  11 tataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatt 78  Q
    |||||| |||||| ||||||| || |  ||||||||||||| || |||||| ||||||||||||||||    
T  3237093 tataagctgttttcataagctatcctaaagagcttatgaaaatatgctgaacacaacttatgaatatt 3237160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 7984969 - 7985032
Alignment:
Q  11 tataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 74  Q
    |||||| | |||| ||||||| |||||||||  |||||||| ||||||||||||| ||||||||    
T  7984969 tataagcttttttcataagctatcttggagaatttatgaaaataagctgaaaacagcttatgaa 7985032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 29659347 - 29659410
Alignment:
Q  7 aagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaactta 70  Q
    ||||||||||||||||| ||||| | |||| ||||| ||||  || ||||||||||||||||||    
T  29659347 aagttataagttgttttcataagttatcttagagagtttatataaataagctgaaaacaactta 29659410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 31030207 - 31030148
Alignment:
Q  4 tataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaa 63  Q
    |||||| ||||||| |||||  ||||||||| ||||||||||||| || |||||||||||    
T  31030207 tataagctataagtagttttcctaagctgtcctggagagcttatggaaataagctgaaaa 31030148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 34117613 - 34117566
Alignment:
Q  4 tataagttataagttgttttgataagctgtcttggagagcttatgaaa 51  Q
    |||||| ||||||||| ||| ||||||| |||||||||||||||||||    
T  34117613 tataagctataagttgctttcataagctatcttggagagcttatgaaa 34117566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 43300878 - 43300929
Alignment:
Q  11 tataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaa 62  Q
    |||||||||||||  |||||| ||||||||| ||||||||| ||||||||||    
T  43300878 tataagttgtttttgtaagctatcttggagaacttatgaaaataagctgaaa 43300929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 148
Target Start/End: Original strand, 1961993 - 1962051
Alignment:
Q  90 ttttcataagttcttccaaacaatctcataagtgtttatgttagtagataaactcaaat 148  Q
    |||||||||| | |||| |||| ||||| |||||||||| | |||||||||||||||||    
T  1961993 ttttcataagctattccgaacattctcacaagtgtttatatgagtagataaactcaaat 1962051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 3977309 - 3977422
Alignment:
Q  12 ataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaaca 111  Q
    ||||| |||||| ||||| |||  ||||||  |||||||| ||||||||| ||| || | ||| || ||| || | |||||||||||||| ||| |||||    
T  3977309 ataagctgttttcataagttgttgtggagaaattatgaaaataagctgaagacagctaaggaacatgtca-taagctgttttcataagtttttctaaaca 3977407  T
Q  112 atctcataagtgttt 126  Q
    |||||| ||||||||    
T  3977408 atctcacaagtgttt 3977422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 6183439 - 6183497
Alignment:
Q  6 taagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaac 64  Q
    |||| |||||| ||| || ||||||||| |||||||||||||| || ||||||||||||    
T  6183439 taagctataagctgtattcataagctgttttggagagcttatggaaataagctgaaaac 6183497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 36639529 - 36639583
Alignment:
Q  18 tgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatg 72  Q
    |||||| ||||||| ||||| ||||||||||||| ||||  ||||||||||||||    
T  36639529 tgttttcataagctatcttgaagagcttatgaaaataagaggaaaacaacttatg 36639583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 38104913 - 38104867
Alignment:
Q  25 ataagctgtcttggagagcttatgaaattaagctgaaaacaacttat 71  Q
    ||||||| |||| ||||||||||| || |||||||||||||||||||    
T  38104913 ataagctatcttagagagcttatggaaataagctgaaaacaacttat 38104867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 130
Target Start/End: Original strand, 1916246 - 1916362
Alignment:
Q  10 ttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaa 109  Q
    |||||||||||||| || | || |||||||||  ||| ||||| |||||||||| |||||||  |||| | | || |||||||||| ||| |||| ||||    
T  1916246 ttataagttgttttcatgaactatcttggagattttaggaaat-aagctgaaaataacttatagatatatta-taagttgttttcacaagctctttcaaa 1916343  T
Q  110 caatctcataagtgtttatgt 130  Q
    |||||||  ||||||||||||    
T  1916344 caatctc--aagtgtttatgt 1916362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 18875357 - 18875422
Alignment:
Q  7 aagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatg 72  Q
    |||||||||| |||||| ||||| | || ||||||||||||| ||  ||| |||||||||||||||    
T  18875357 aagttataagctgttttaataagatatcctggagagcttatggaaacaagttgaaaacaacttatg 18875422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 72
Target Start/End: Original strand, 31694518 - 31694579
Alignment:
Q  11 tataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatg 72  Q
    ||||||||||| |  ||||||  |||| ||||||||||||| |||| |||||||||||||||    
T  31694518 tataagttgttctcttaagctcacttgtagagcttatgaaaataagttgaaaacaacttatg 31694579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 34245717 - 34245770
Alignment:
Q  4 tataagttataagttgttttgataagctgtcttggagagcttatgaaattaagc 57  Q
    |||||| ||||||||||||| ||||||| || ||||||||| |||||| |||||    
T  34245717 tataagctataagttgtttttataagctatcatggagagctgatgaaaataagc 34245770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 39594801 - 39594866
Alignment:
Q  5 ataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaactta 70  Q
    ||||||| |||| |||||| ||||| | |||||  || ||||||||| ||||||||||||||||||    
T  39594801 ataagttgtaagctgttttcataagatatcttgttgaacttatgaaaataagctgaaaacaactta 39594866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 72
Target Start/End: Complemental strand, 8177577 - 8177541
Alignment:
Q  36 tggagagcttatgaaattaagctgaaaacaacttatg 72  Q
    |||||||||||||||| ||| ||||||||||||||||    
T  8177577 tggagagcttatgaaaataacctgaaaacaacttatg 8177541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 164
Target Start/End: Complemental strand, 11095489 - 11095413
Alignment:
Q  88 tgttttcataagttcttccaaacaatctcataagtgtttatgttagtagataaactcaaatgaaccaattcaaacag 164  Q
    ||||| || |||||||  |||||||| ||| |||||||||||| ||||||||| || |||| ||||| | |||||||    
T  11095489 tgtttccacaagttctctcaaacaatatcacaagtgtttatgtcagtagataagcttaaataaaccagtccaaacag 11095413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 11700162 - 11700214
Alignment:
Q  10 ttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaa 62  Q
    |||||||||||||||||| ||| || |||||| ||||||||| |||| |||||    
T  11700162 ttataagttgttttgatatgctatcgtggagaacttatgaaaataagatgaaa 11700214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 29925841 - 29925940
Alignment:
Q  11 tataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatt-tcagtacgttgttttcataagttcttccaaa 109  Q
    ||||||||||||  ||||||| | ||||||| ||||||||| |||| |||||| |||  ||||| ||| ||| || | |||||||||||||||| |||||    
T  29925841 tataagttgtttacataagctatattggagaacttatgaaaataagttgaaaaaaacacatgaacattgtca-taagctgttttcataagttctcccaaa 29925939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 40205142 - 40205090
Alignment:
Q  13 taagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaaca 65  Q
    ||||||||||| ||||||| || ||||||||||||  || |||||||||||||    
T  40205142 taagttgttttcataagctatcctggagagcttatagaaataagctgaaaaca 40205090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 70; Significance: 1e-31; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 9 - 166
Target Start/End: Complemental strand, 24363673 - 24363516
Alignment:
Q  9 gttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaa 108  Q
    ||||||||||||||| ||||||| || ||||||| ||||| || |||||||||||||||||||| | || ||| ||| |||||| | ||||  || ||||    
T  24363673 gttataagttgttttcataagctatcctggagaggttatggaaataagctgaaaacaacttatggacatgtcaataccttgtttccttaaggcctcccaa 24363574  T
Q  109 acaatctcataagtgtttatgttagtagataaactcaaatgaaccaattcaaacaggt 166  Q
    || |||||||||||| ||||| |||||||||||||||||| || |||| |||||||||    
T  24363573 actatctcataagtgcttatgctagtagataaactcaaataaaacaatccaaacaggt 24363516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 117
Target Start/End: Complemental strand, 19022655 - 19022549
Alignment:
Q  11 tataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatt-tcagtacgttgttttcataagttcttccaaa 109  Q
    ||||||||||||| ||||||| | ||||||| ||||||||| |||| |||| |||||||||||| ||| ||| || ||||||||||||| |||| |||||    
T  19022655 tataagttgtttttataagctatattggagaacttatgaaaataagttgaagacaacttatgaaaattgtca-taagttgttttcataaattctcccaaa 19022557  T
Q  110 caatctca 117  Q
    ||||||||    
T  19022556 caatctca 19022549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 18 - 147
Target Start/End: Original strand, 7244687 - 7244816
Alignment:
Q  18 tgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaac-aatctc 116  Q
    |||||| ||||||| | ||||||||||||||||| |||||||||||||||||||||  || ||| ||  |||||| ||| || |||| ||||| |||||     
T  7244687 tgttttcataagctatattggagagcttatgaaaataagctgaaaacaacttatgagcatgtca-taaattgtttccatcagctctttcaaacaaatctt 7244785  T
Q  117 ataagtgtttatgttagtagataaactcaaa 147  Q
    | |||||||||||  ||||||||||||||||    
T  7244786 agaagtgtttatggcagtagataaactcaaa 7244816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 34744018 - 34744182
Alignment:
Q  1 ttgtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatt-tcagtacgttgttttcataag 99  Q
    ||||||| | ||||||||||||| ||||||| | ||||||| ||||| ||| ||||  ||||| | ||| |||| ||| ||| || ||| ||||||| ||    
T  34744018 ttgtatatggtataagttgttttcataagctatattggagaacttataaaaataaggcgaaaaaagcttgtgaaaattgtca-taagttcttttcattag 34744116  T
Q  100 ttcttccaaacaatctcataagtgtttatgttagtagataaactcaaatgaaccaattcaaacaggt 166  Q
    |||||||||||| ||||| || | || |||||||||||||| ||||||| |  ||||||||||||||    
T  34744117 ttcttccaaacagtctcacaaatctt-atgttagtagataagctcaaattattcaattcaaacaggt 34744182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 11 - 164
Target Start/End: Original strand, 30535563 - 30535715
Alignment:
Q  11 tataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaac 110  Q
    |||||| |||||  ||||||| ||||  ||| | ||||||| ||| ||||||||| |||| ||| || ||| || |||||||||||||||||| | ||||    
T  30535563 tataagctgtttccataagctatcttatagaacatatgaaaataacctgaaaacagcttacgaacatatca-taagttgttttcataagttctccaaaac 30535661  T
Q  111 aatctcataagtgtttatgttagtagataaactcaaatgaaccaattcaaacag 164  Q
    | ||||  |||||||||||| |||| || ||||||||| |  ||||||||||||    
T  30535662 agtctctcaagtgtttatgtcagtaaattaactcaaataagtcaattcaaacag 30535715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 146
Target Start/End: Complemental strand, 25670663 - 25670522
Alignment:
Q  4 tataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttct 103  Q
    |||||| ||| | ||||||| ||||  | ||||||||||||| ||||| |||||||||||||| |||| || || ||| || |||||||||||||||| |    
T  25670663 tataagctatcaattgtttttataacatatcttggagagcttgtgaaaataagctgaaaacaatttattaacatgtca-taagttgttttcataagtttt 25670565  T
Q  104 tccaaacaatctcataagtgtttatgttagtagataaactcaa 146  Q
      |||||| ||||| ||| | |||||| | ||||||| |||||    
T  25670564 ctcaaacagtctcacaagagcttatgtcaatagataagctcaa 25670522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 44821949 - 44822019
Alignment:
Q  1 ttgtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttat 71  Q
    |||||||||||||||| |||||| ||||||| |  |||||| ||||||||| |||| ||||||||||||||    
T  44821949 ttgtataagttataagctgttttcataagctattctggagaacttatgaaaataagttgaaaacaacttat 44822019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 752959 - 753118
Alignment:
Q  1 ttgtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagt 100  Q
    ||||||||| |||||| ||||||||||| || |||||| |||| ||||||| | |||| |||||| |||||  |||| ||| ||   |||||||||||||    
T  752959 ttgtataagctataagctgttttgataaactatcttggggagcatatgaaaattagctaaaaacagcttattgatatgtca-taaactgttttcataagt 753057  T
Q  101 tcttccaaacaatctcataagtgtttatgttagtagataaactcaaatgaaccaattcaaa 161  Q
    |||| ||| || ||| | | ||| |||||  ||||||||| ||||||| | |||| |||||    
T  753058 tctttcaatcagtcttagaggtgcttatgcaagtagataagctcaaataagccaaatcaaa 753118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 140
Target Start/End: Original strand, 23214880 - 23214983
Alignment:
Q  36 tggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaacaatctcataagtgtttatgttagta 135  Q
    |||||| ||||||||  ||||||||| | | |||||| | || ||| || ||||||||||||| ||||  |||||| ||||||||||||||||| |||||    
T  23214880 tggagatcttatgaacataagctgaatagagcttatggaaatgtca-taagttgttttcataaattctctcaaacagtctcataagtgtttatgctagta 23214978  T
Q  136 gataa 140  Q
    |||||    
T  23214979 gataa 23214983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 47 - 147
Target Start/End: Original strand, 24967097 - 24967196
Alignment:
Q  47 tgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaacaatctcataagtgtttatgttagtagataaactcaa 146  Q
    ||||| ||||||||||||||||| || |||| | | || ||||||| |||||  ||||||||||| |||||||| |||||||  |||||||||| |||||    
T  24967097 tgaaaataagctgaaaacaacttctggatatgtta-taagttgtttccataatctcttccaaacagtctcataaatgtttatactagtagataagctcaa 24967195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 4 - 165
Target Start/End: Original strand, 46082027 - 46082189
Alignment:
Q  4 tataagttataagttgttttgataa--gctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagtt 101  Q
    |||||||||||||||||||| |||   ||| |  |||||||||||||||| ||||||||||||||||||||   || ||| || |||||||||||||| |    
T  46082027 tataagttataagttgttttcatagacgctattctggagagcttatgaaaataagctgaaaacaacttatggtcatgtca-taagttgttttcataagct 46082125  T
Q  102 cttccaaacaatctcataagtgtttatgttagtagataaactcaaatgaaccaattcaaacagg 165  Q
    ||    |||| ||||| || ||||||||  ||||| |||  |||||| | ||||| ||||||||    
T  46082126 ctcattaacagtctcaaaattgtttatgccagtaggtaagatcaaattagccaatccaaacagg 46082189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 48917414 - 48917362
Alignment:
Q  13 taagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaaca 65  Q
    ||||||||||| ||||||| ||||||||||||||||||| ||||||| |||||    
T  48917414 taagttgttttcataagctatcttggagagcttatgaaaataagctggaaaca 48917362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 54 - 129
Target Start/End: Original strand, 36537951 - 36538025
Alignment:
Q  54 aagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaacaatctcataagtgtttatg 129  Q
    ||||| ||||||||||||||| || ||| || ||||||| ||||||||||  |||||||||||| |||||||||||    
T  36537951 aagctaaaaacaacttatgaacatgtca-taagttgtttccataagttctctcaaacaatctcacaagtgtttatg 36538025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 148
Target Start/End: Complemental strand, 2825301 - 2825170
Alignment:
Q  11 tataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaac 110  Q
    ||||||||||||| | ||||| || | |||| |||||| || ||||||||||| |||||||||| ||      | | || |||||||||||||||||||     
T  2825301 tataagttgttttcacaagctatcctagagaacttatggaaataagctgaaaataacttatgaacat------aagatggtttcataagttcttccaaag 2825208  T
Q  111 aatctcataagtgtttatgttagtagataaactcaaat 148  Q
    | ||||| ||||| |||| | ||||||||| |||||||    
T  2825207 agtctcacaagtgcttatataagtagataagctcaaat 2825170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 25596042 - 25596092
Alignment:
Q  20 ttttgataagctgtcttggagagcttatgaaattaagctgaaaacaactta 70  Q
    |||| ||||||| ||||||||||||||||||| |||| |||||||||||||    
T  25596042 ttttcataagctatcttggagagcttatgaaaataagttgaaaacaactta 25596092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 18965787 - 18965726
Alignment:
Q  4 tataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaaca 65  Q
    |||| ||||||||||||||| ||||||| ||||||||  |||||||||  ||||||||||||    
T  18965787 tataggttataagttgttttcataagctatcttggaggtcttatgaaaacaagctgaaaaca 18965726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 48470044 - 48470153
Alignment:
Q  11 tataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaac 110  Q
    ||||||||||||| ||||||| | ||| | | ||||||||  |||||| |||| | |||||||| | | |  || | |||||||||||||||| ||||||    
T  48470044 tataagttgttttcataagctattttgaataacttatgaacataagctcaaaaaagcttatgaaaaatgccataagctgttttcataagttctcccaaac 48470143  T
Q  111 aatctcataa 120  Q
    ||||||||||    
T  48470144 aatctcataa 48470153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 529382 - 529438
Alignment:
Q  18 tgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 74  Q
    |||||| ||||||| ||||||||||||||||||| || | |||||||| ||||||||    
T  529382 tgttttcataagctatcttggagagcttatgaaaatatgttgaaaacagcttatgaa 529438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 129
Target Start/End: Complemental strand, 43250755 - 43250653
Alignment:
Q  25 ataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaacaatctcataagtgt 124  Q
    ||||||| | ||||||||||||||||  ||| |||||||||||||| ||| || ||| || | |||||||||||||  | ||||||||| ||| ||||||    
T  43250755 ataagctattttggagagcttatgaatataaactgaaaacaacttacgaacatgtca-taagctgttttcataagtaatcccaaacaat-tcacaagtgt 43250658  T
Q  125 ttatg 129  Q
    |||||    
T  43250657 ttatg 43250653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 44151557 - 44151489
Alignment:
Q  4 tataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatg 72  Q
    |||||| ||||||||||||| |||| || ||||| | |||||||| || ||||||||||||| ||||||    
T  44151557 tataagctataagttgttttcataaactatcttgaaaagcttatggaaataagctgaaaacatcttatg 44151489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 129
Target Start/End: Original strand, 9038119 - 9038228
Alignment:
Q  18 tgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaacaatctca 117  Q
    |||||| |||| || || |||||| ||| ||||| |||||||||||||| ||||||| || ||| || | |||||| |||||||||||  |||| |||||    
T  9038119 tgttttcataaactatcatggagaacttgtgaaaataagctgaaaacaa-ttatgaacatgtca-taagctgtttttataagttcttctgaacattctca 9038216  T
Q  118 taagtgtttatg 129  Q
    |||||| |||||    
T  9038217 taagtgcttatg 9038228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 18350785 - 18350738
Alignment:
Q  3 gtataagttataagttgttttgataagctgtcttggagagcttatgaa 50  Q
    |||||||||||||| |||||| ||||||| || |||||||||||||||    
T  18350785 gtataagttataagctgttttcataagctatcatggagagcttatgaa 18350738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 27378891 - 27378836
Alignment:
Q  18 tgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatga 73  Q
    |||||| |||| || || |||||||||||||||| ||| |||||||||||||||||    
T  27378891 tgttttcataaactatcctggagagcttatgaaaataaactgaaaacaacttatga 27378836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 28614423 - 28614530
Alignment:
Q  1 ttgtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagt 100  Q
    ||||||| | ||| || |||||| | ||||||| ||||||| ||||||||||||| ||||||| | ||| |||| |||    || |||||||||||||||    
T  28614423 ttgtatatgatattagctgtttttaaaagctgtattggagaacttatgaaattaaactgaaaaaagcttgtgaaaattgttatatgttgttttcataagt 28614522  T
Q  101 tcttccaa 108  Q
    ||| ||||    
T  28614523 tctcccaa 28614530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 30456527 - 30456480
Alignment:
Q  4 tataagttataagttgttttgataagctgtcttggagagcttatgaaa 51  Q
    |||||||||||||| ||||| |||| || |||||||||||||||||||    
T  30456527 tataagttataagtggttttcataaactatcttggagagcttatgaaa 30456480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 33601479 - 33601417
Alignment:
Q  11 tataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 74  Q
    ||||||||||||| ||||||| |||| |||| |||||||| |||||||||||| | ||||||||    
T  33601479 tataagttgtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaa 33601417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 90 - 129
Target Start/End: Original strand, 48131415 - 48131454
Alignment:
Q  90 ttttcataagttcttccaaacaatctcataagtgtttatg 129  Q
    |||||||||||||||||||||| ||||||||||| |||||    
T  48131415 ttttcataagttcttccaaacagtctcataagtgcttatg 48131454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 161
Target Start/End: Original strand, 2895343 - 2895385
Alignment:
Q  119 aagtgtttatgttagtagataaactcaaatgaaccaattcaaa 161  Q
    ||||||||||| |||||||||| |||||||||||| |||||||    
T  2895343 aagtgtttatgctagtagataatctcaaatgaaccgattcaaa 2895385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 17944423 - 17944361
Alignment:
Q  1 ttgtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaa 63  Q
    ||||||| ||| ||||||||||| ||||| | ||||||| |  ||||||||||||||||||||    
T  17944423 ttgtatatgttgtaagttgttttcataagttatcttggataatttatgaaattaagctgaaaa 17944361  T

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Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 81
Target Start/End: Complemental strand, 26935599 - 26935557
Alignment:
Q  39 agagcttatgaaattaagctgaaaacaacttatgaatatttca 81  Q
    |||||||||| || ||||||||||||| |||||||||||||||    
T  26935599 agagcttatggaaataagctgaaaacagcttatgaatatttca 26935557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 48
Target Start/End: Original strand, 32210262 - 32210304
Alignment:
Q  6 taagttataagttgttttgataagctgtcttggagagcttatg 48  Q
    |||||||||||||||||| ||||||| |||| |||||||||||    
T  32210262 taagttataagttgtttttataagctatctttgagagcttatg 32210304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 64
Target Start/End: Complemental strand, 47130856 - 47130802
Alignment:
Q  10 ttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaac 64  Q
    |||||||||||||| ||||||| ||||||||| ||| ||||| |||| |||||||    
T  47130856 ttataagttgttttcataagctatcttggagaacttgtgaaaataagttgaaaac 47130802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 9423662 - 9423601
Alignment:
Q  13 taagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 74  Q
    |||| |||||| ||||||| || |||||||||| |  || ||||||||||||||||||||||    
T  9423662 taagctgttttaataagctatcctggagagcttcttgaaataagctgaaaacaacttatgaa 9423601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 12792624 - 12792579
Alignment:
Q  20 ttttgataagctgtcttggagagcttatgaaattaagctgaaaaca 65  Q
    |||| ||||||| ||||| ||||||||||||| |||||||||||||    
T  12792624 ttttcataagctatcttgaagagcttatgaaaataagctgaaaaca 12792579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 46104644 - 46104583
Alignment:
Q  4 tataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaaca 65  Q
    |||||| ||||||||||||| ||||||| |  || ||||||||||||| ||||||| |||||    
T  46104644 tataagctataagttgttttcataagctatgctgaagagcttatgaaaataagctggaaaca 46104583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 148
Target Start/End: Original strand, 5288195 - 5288247
Alignment:
Q  96 taagttcttccaaacaatctcataagtgtttatgttagtagataaactcaaat 148  Q
    |||||||| ||||||| ||||||||||| ||||| |||||||| | |||||||    
T  5288195 taagttctcccaaacagtctcataagtgcttatgctagtagattagctcaaat 5288247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 108
Target Start/End: Complemental strand, 11619222 - 11619131
Alignment:
Q  17 ttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatt-tcagtacgttgttttcataagttcttccaa 108  Q
    ||||||| |||||||   ||||||| |||||||||||||| |||||| | |||||||| ||| ||| || ||||||||||||| |||| ||||    
T  11619222 ttgtttttataagctacgttggagaacttatgaaattaagttgaaaaaagcttatgaaaattgtca-taagttgttttcataaattctcccaa 11619131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 15075162 - 15075094
Alignment:
Q  4 tataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatg 72  Q
    ||||||||||||||| |||| |||| ||  ||| ||||||||||| || |||||| |||||| ||||||    
T  15075162 tataagttataagttattttcataaactaccttagagagcttatggaaataagctaaaaacagcttatg 15075094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 21568559 - 21568459
Alignment:
Q  17 ttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaacaatctc 116  Q
    ||||||| ||||||| | ||||||| |||||| || |||| |||||| | |||||||| |||    || | |||||||||||||||| ||||||| ||||    
T  21568559 ttgtttttataagctatattggagaacttatggaactaagttgaaaagagcttatgaaaattgttataagctgttttcataagttctcccaaacagtctc 21568460  T
Q  117 a 117  Q
    |    
T  21568459 a 21568459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 103
Target Start/End: Original strand, 39967920 - 39968012
Alignment:
Q  11 tataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttct 103  Q
    ||||||||||||| ||||||| |||  |||| || |||||| |||| |||||||| |||||||| | | |  || | ||||||||||||||||    
T  39967920 tataagttgttttcataagctatctgagagaactaatgaaaataagttgaaaacagcttatgaacaatgccataagctgttttcataagttct 39968012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 8e-24; HSPs: 81)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 4 - 148
Target Start/End: Complemental strand, 31517817 - 31517674
Alignment:
Q  4 tataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttct 103  Q
    |||||| |||||| ||| || |||| |||||||||||||||||||||| ||||||||||||| |||||||| || ||| |  |||||||| |||||||||    
T  31517817 tataagctataagctgtcttcataatctgtcttggagagcttatgaaaataagctgaaaacagcttatgaacatgtca-tgagttgttttgataagttct 31517719  T
Q  104 tccaaacaatctcataagtgtttatgttagtagataaactcaaat 148  Q
     ||||||| ||||| ||||| |||||  |||| |||| |||||||    
T  31517718 cccaaacagtctcacaagtgcttatgccagtaaataagctcaaat 31517674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 7137078 - 7136932
Alignment:
Q  1 ttgtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagt 100  Q
    ||||||||  |||||| |||||| ||||||| ||||||||| ||||||||| ||||||||||| ||||||||||||| ||| || |   |||||||||||    
T  7137078 ttgtataatctataagctgttttcataagctatcttggagaacttatgaaaataagctgaaaataacttatgaatatgtca-taagcgattttcataagt 7136980  T
Q  101 tcttccaaacaatctcataagtgtttatgttagtagataaactcaaat 148  Q
    |||| |||||  | | | ||||||||||||  | ||||||||||||||    
T  7136979 tctttcaaactctttaacaagtgtttatgtcgggagataaactcaaat 7136932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 20 - 148
Target Start/End: Complemental strand, 10199469 - 10199342
Alignment:
Q  20 ttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaacaatctcata 119  Q
    |||| ||||||| | || |||||||||||||| |||||||||||||||||||||| || ||| || | | ||||||| |||||| ||||| | | ||| |    
T  10199469 ttttcataagctattttagagagcttatgaaaataagctgaaaacaacttatgaacatgtca-taagctattttcatgagttctcccaaatagtgtcaca 10199371  T
Q  120 agtgtttatgttagtagataaactcaaat 148  Q
    |||| |||||||||||||||| |||||||    
T  10199370 agtgcttatgttagtagataagctcaaat 10199342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 34290226 - 34290302
Alignment:
Q  1 ttgtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatat 77  Q
    ||||||||| |||||| |||||| ||||||| ||||| ||| ||||||||| |||||||||||||||||||||||||    
T  34290226 ttgtataagctataagctgttttcataagctatcttgaagaacttatgaaaataagctgaaaacaacttatgaatat 34290302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 35 - 148
Target Start/End: Original strand, 6292517 - 6292628
Alignment:
Q  35 ttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaacaatctcataagtgtttatgttagt 134  Q
    ||||||||||||||||| ||||||||||||| |||||||| || ||| || | |||||| | || |||| ||||||||||||| ||||| |||||| |||    
T  6292517 ttggagagcttatgaaaataagctgaaaacagcttatgaacatgtca-taagctgtttt-aaaaattctcccaaacaatctcaaaagtgcttatgtcagt 6292614  T
Q  135 agataaactcaaat 148  Q
    |||||| |||||||    
T  6292615 agataagctcaaat 6292628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 25 - 148
Target Start/End: Complemental strand, 32515497 - 32515375
Alignment:
Q  25 ataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaacaatctcataagtgt 124  Q
    ||||||| || ||||||||||||  |  |||| ||||||||||||||  | || ||| |||| ||||| |||||| ||| ||||||| ||||| |||||     
T  32515497 ataagctatcatggagagcttatagatataagttgaaaacaacttattgacatgtca-tacgctgtttccataagctctcccaaacagtctcacaagtgc 32515399  T
Q  125 ttatgttagtagataaactcaaat 148  Q
    ||||||||||||||||||||||||    
T  32515398 ttatgttagtagataaactcaaat 32515375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 49938737 - 49938853
Alignment:
Q  1 ttgtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatt-tcagtacgttgttttcataag 99  Q
    ||||||| ||||||||||||||| ||||||| | || |||| ||||||||| |||| |||||| | ||| |||| ||| ||| || | ||||||||||||    
T  49938737 ttgtatatgttataagttgtttttataagctatattagagaacttatgaaaataagttgaaaaaagcttttgaaaattgtca-taagctgttttcataag 49938835  T
Q  100 ttcttccaaacaatctca 117  Q
    |||| |||||||||||||    
T  49938836 ttctcccaaacaatctca 49938853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 2777882 - 2777997
Alignment:
Q  1 ttgtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagt 100  Q
    ||||||||| |||||| |||||| ||||| |  |||||||| ||||||||| ||||||||||||  ||||||||||  ||| || |||| ||||||||||    
T  2777882 ttgtataagctataagctgttttaataagttaacttggagaacttatgaaaataagctgaaaacggcttatgaatacgtca-taagttggtttcataagt 2777980  T
Q  101 tcttccaaacaatctca 117  Q
    ||| | ||||| |||||    
T  2777981 tctcctaaacagtctca 2777997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 23902144 - 23902076
Alignment:
Q  4 tataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatg 72  Q
    |||||| ||||||||||||| | ||||| |||| ||||||||||| || ||||||||||||||||||||    
T  23902144 tataagctataagttgttttcaaaagctatcttagagagcttatggaagtaagctgaaaacaacttatg 23902076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 25479581 - 25479644
Alignment:
Q  11 tataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 74  Q
    ||||||||||||| ||||||| || | |||||||||||||| |||||||||||||||| |||||    
T  25479581 tataagttgttttcataagctatcctagagagcttatgaaaataagctgaaaacaactaatgaa 25479644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 28689531 - 28689461
Alignment:
Q  4 tataagttataagttgttttgata--agctgtcttggagagcttatgaaattaagctgaaaacaacttatg 72  Q
    |||||| ||||||||||||| |||  |||| ||||||| ||||||||||| ||||||||||||||||||||    
T  28689531 tataagctataagttgttttcatataagctatcttggaaagcttatgaaaataagctgaaaacaacttatg 28689461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 148
Target Start/End: Complemental strand, 37593740 - 37593618
Alignment:
Q  25 ataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaacaatctcataagtgt 124  Q
    ||||||| | ||| ||||||||||||| ||||||||||||| |||||||| || ||| || ||||| ||||| |||| | ||||||| ||| | ||||||    
T  37593740 ataagctattttgaagagcttatgaaaataagctgaaaacagcttatgaacatgtca-taagttgtgttcattagttttcccaaacagtctaacaagtgt 37593642  T
Q  125 ttatgttagtagataaactcaaat 148  Q
    |||||  |||| |||| |||||||    
T  37593641 ttatgccagtatataagctcaaat 37593618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 38503535 - 38503472
Alignment:
Q  11 tataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 74  Q
    |||||||||||||  | |||| ||||||||| ||||||||| ||||||||||||||||||||||    
T  38503535 tataagttgtttttgttagctatcttggagaacttatgaaaataagctgaaaacaacttatgaa 38503472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 45975680 - 45975755
Alignment:
Q  1 ttgtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaata 76  Q
    ||||||||| || ||| |||||| ||||||| |||||||||  |||||||| ||||||||||||| ||||||||||    
T  45975680 ttgtataagctacaagctgttttcataagctatcttggagaatttatgaaaataagctgaaaacagcttatgaata 45975755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 108 - 166
Target Start/End: Complemental strand, 6231790 - 6231732
Alignment:
Q  108 aacaatctcataagtgtttatgttagtagataaactcaaatgaaccaattcaaacaggt 166  Q
    |||||||||| || |||||||| |||||||||| ||||||| |||||||||||||||||    
T  6231790 aacaatctcacaaatgtttatgctagtagataacctcaaataaaccaattcaaacaggt 6231732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 19389909 - 19390030
Alignment:
Q  19 gttttgataagctgtcttggagagcttatgaaattaagct-gaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaacaatctca 117  Q
    ||||| ||||||| ||||||||||||| ||||| ||||||  ||||||||||||||| || ||| || ||| |||||||| ||||| ||||||| | |||    
T  19389909 gttttcataagctatcttggagagcttgtgaaaataagctaaaaaacaacttatgaacatatca-taagtttttttcatacgttctcccaaacagtgtca 19390007  T
Q  118 taagtgtttatgttagtagataa 140  Q
     || |  ||||||||||||||||    
T  19390008 caactacttatgttagtagataa 19390030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 5 - 103
Target Start/End: Complemental strand, 37842431 - 37842334
Alignment:
Q  5 ataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttct 103  Q
    ||||| ||||||||||||| ||||||| ||||| ||| ||||| ||| ||||||||||||  |||||||| || ||| || | ||||||||||||||||    
T  37842431 ataagctataagttgttttcataagctatcttgaagaacttataaaaataagctgaaaactgcttatgaacatgtcatta-gatgttttcataagttct 37842334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 51695573 - 51695459
Alignment:
Q  3 gtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttc 102  Q
    ||||||||||| || |||||| ||||||| |||||||||  |||||||| ||||||||||| | |||||||| | |    || |||||||  ||||||||    
T  51695573 gtataagttatcagatgttttcataagctatcttggagaatttatgaaaataagctgaaaatagcttatgaacaatgtgataagttgtttatataagttc 51695474  T
Q  103 ttccaaacaatctca 117  Q
    ||||||||| |||||    
T  51695473 ttccaaacagtctca 51695459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 129
Target Start/End: Complemental strand, 7218151 - 7218027
Alignment:
Q  4 tataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttct 103  Q
    |||||| ||||||||||||| |||| || || |||||| ||||||||| |||| |||||||| ||| ||||  | ||| || || ||||||| ||| ||     
T  7218151 tataagctataagttgttttcataacctatcctggagaacttatgaaaataagttgaaaacagcttgtgaacgtgtca-taagtcgttttcacaagctcc 7218053  T
Q  104 tccaaacaatctcataagtgtttatg 129  Q
     ||||||||||||| |||||||||||    
T  7218052 cccaaacaatctcagaagtgtttatg 7218027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 26779995 - 26779934
Alignment:
Q  11 tataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatg 72  Q
    ||||||||||||| ||||||| ||||| ||| ||||||||| |||| |||||||||||||||    
T  26779995 tataagttgttttcataagctatcttgaagaacttatgaaaataagttgaaaacaacttatg 26779934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 72
Target Start/End: Original strand, 27140478 - 27140539
Alignment:
Q  11 tataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatg 72  Q
    |||||| |||||| ||||||| || ||||||||||||| || ||||||||||||||||||||    
T  27140478 tataagctgtttttataagctatcatggagagcttatgcaaataagctgaaaacaacttatg 27140539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 35590972 - 35590899
Alignment:
Q  1 ttgtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 74  Q
    ||||||||| ||||||| | ||| ||||||| || ||||||||||||| || |||||||||||||||| |||||    
T  35590972 ttgtataagctataagtcgatttcataagctatcatggagagcttatggaaataagctgaaaacaactgatgaa 35590899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 46252738 - 46252689
Alignment:
Q  25 ataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 74  Q
    ||||||| ||||||||||||||||||| ||| ||||||||||||||||||    
T  46252738 ataagctatcttggagagcttatgaaaataacctgaaaacaacttatgaa 46252689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 3234095 - 3233979
Alignment:
Q  1 ttgtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagt 100  Q
    ||||||| | ||||||||||||| ||||||| | ||||||| ||||||||| ||||  ||||| |||||||||| | |    || |||||||||||||||    
T  3234095 ttgtatatgctataagttgtttttataagctatattggagaacttatgaaaataagtagaaaaaaacttatgaaaactgttataagttgttttcataagt 3233996  T
Q  101 tcttccaaacaatctca 117  Q
    ||| || |||| |||||    
T  3233995 tctccctaacagtctca 3233979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 7472301 - 7472365
Alignment:
Q  1 ttgtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaaca 65  Q
    ||||||||  |||||| |||||  ||||||| ||||||||||||||||||| |||||||||||||    
T  7472301 ttgtataatctataagctgtttccataagctatcttggagagcttatgaaaataagctgaaaaca 7472365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 12564569 - 12564509
Alignment:
Q  11 tataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttat 71  Q
    |||| |||||||| ||||||| ||||||||| |||||| || |||||||||||||||||||    
T  12564569 tataggttgttttcataagctatcttggagaacttatggaaataagctgaaaacaacttat 12564509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 43332474 - 43332538
Alignment:
Q  1 ttgtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaaca 65  Q
    ||||||||||| |||| |||||| ||||||| ||||| ||||||||| ||| |||||||||||||    
T  43332474 ttgtataagttgtaagctgttttcataagctatcttgaagagcttattaaaataagctgaaaaca 43332538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 5887068 - 5887001
Alignment:
Q  7 aagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 74  Q
    |||||||||| |||||  ||||||  ||||||||| |||| |||| ||||||||||||||||||||||    
T  5887068 aagttataagctgtttctataagccatcttggagaacttacgaaaataagctgaaaacaacttatgaa 5887001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 14630043 - 14629973
Alignment:
Q  4 tataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 74  Q
    |||||| |||||| | |||| ||||||| |||||||||  ||||| || ||||||||||||||||||||||    
T  14630043 tataagctataagctattttcataagctatcttggagactttatggaaataagctgaaaacaacttatgaa 14629973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 15361065 - 15361103
Alignment:
Q  36 tggagagcttatgaaattaagctgaaaacaacttatgaa 74  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  15361065 tggagagcttatgaaaataagctgaaaacaacttatgaa 15361103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 148
Target Start/End: Complemental strand, 24313672 - 24313610
Alignment:
Q  86 gttgttttcataagttcttccaaacaatctcataagtgtttatgttagtagataaactcaaat 148  Q
    |||||||||| || |||||  ||||||||||| |||||||| || ||||||||||||||||||    
T  24313672 gttgttttcacaatttcttttaaacaatctcacaagtgtttgtgctagtagataaactcaaat 24313610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 1510390 - 1510317
Alignment:
Q  1 ttgtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 74  Q
    ||||||| ||||||||||||||| ||||||| | ||||||| |||| |||| |||| |||||| | ||||||||    
T  1510390 ttgtataggttataagttgtttttataagctctattggagaacttacgaaaataagttgaaaaaagcttatgaa 1510317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 4700144 - 4700079
Alignment:
Q  3 gtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaact 68  Q
    ||||||| |||||  |||||| |||| || || |||||||||||||||| ||||||||||||||||    
T  4700144 gtataagctataaactgtttttataaactatcctggagagcttatgaaaataagctgaaaacaact 4700079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 5592762 - 5592694
Alignment:
Q  4 tataagttataagttgttttgataagct-gtcttggagagcttatgaaattaagctgaaaacaacttatg 72  Q
    |||||| ||||||||||||| ||||||| |||||  ||||||||||||| ||||||| ||||||||||||    
T  5592762 tataagctataagttgttttcataagctagtctta-agagcttatgaaaataagctggaaacaacttatg 5592694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 24915131 - 24915058
Alignment:
Q  1 ttgtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 74  Q
    ||||||| | |||||| |||||| ||||||||||||||||| ||| ||||| |||| |||||| | ||||||||    
T  24915131 ttgtatatgctataagctgttttcataagctgtcttggagaacttgtgaaaataagttgaaaaaagcttatgaa 24915058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 167
Target Start/End: Complemental strand, 37241899 - 37241736
Alignment:
Q  4 tataagttataagttgttttgataagctgtcttggagagcttatgaaattaagct-gaaaacaacttatgaatatttcagtacgttgtttt-cataagtt 101  Q
    |||||| || |||||||||| ||||| | || | |||||||||||||| |||||| ||||| ||||||||||||| ||| || |||||||| |||| | |    
T  37241899 tataagctagaagttgttttcataagatatcctagagagcttatgaaaataagctggaaaaaaacttatgaatatatca-taagttgttttgcatatgct 37241801  T
Q  102 cttccaaacaatctcataagtgtttatgttagtagataaactcaaatgaaccaattcaaacaggtt 167  Q
    || | ||||||||||  ||||| |||||  ||||||||| || |||| |  |||| ||||||||||    
T  37241800 ctcctaaacaatctcgcaagtgcttatg-cagtagataagcttaaataagtcaatccaaacaggtt 37241736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 149
Target Start/End: Complemental strand, 4768877 - 4768762
Alignment:
Q  33 tcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaacaatctcataagtgtttatgtta 132  Q
    |||||||||  ||||| || |||||||||||||| ||||| | || || ||| | ||||||| |||||| | ||||||  ||||| |||||||||||  |    
T  4768877 tcttggagaatttatggaaataagctgaaaacaagttatggacatgtc-gtaagctgttttcgtaagttttcccaaactgtctcacaagtgtttatgcca 4768779  T
Q  133 gtagataaactcaaatg 149  Q
    || ||||||||||||||    
T  4768778 gttgataaactcaaatg 4768762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 12593522 - 12593462
Alignment:
Q  12 ataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatg 72  Q
    ||||| |||||| ||||||| |||||||| ||||||| ||| || ||||||||||||||||    
T  12593522 ataagctgttttcataagctatcttggagcgcttatggaataaacctgaaaacaacttatg 12593462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 27820416 - 27820344
Alignment:
Q  2 tgtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 74  Q
    |||||||| |||| | |||||| ||||||| |||||||||  |||||||| ||||||||||| | ||||||||    
T  27820416 tgtataagctatatgctgtttttataagctatcttggagaatttatgaaaataagctgaaaatagcttatgaa 27820344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 47598490 - 47598430
Alignment:
Q  12 ataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatg 72  Q
    |||||||||||| ||||||| || |||||||||||||  |  |||||||||||||||||||    
T  47598490 ataagttgttttcataagctatcctggagagcttatggcaacaagctgaaaacaacttatg 47598430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 219621 - 219558
Alignment:
Q  11 tataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 74  Q
    ||||||||||||  |||||||||| || |||||||||| || | ||||||||||| ||||||||    
T  219621 tataagttgtttacataagctgtcctgaagagcttatggaaatgagctgaaaacagcttatgaa 219558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 4548717 - 4548780
Alignment:
Q  7 aagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaactta 70  Q
    |||| ||||| |||||| ||||||| |||||||||||||  |||| |||||| |||||||||||    
T  4548717 aagtcataagctgttttcataagctatcttggagagcttcagaaaataagctaaaaacaactta 4548780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 10744301 - 10744364
Alignment:
Q  11 tataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 74  Q
    |||||| |||||| |||||||||||| |||| ||||| ||| |||| |||||||| ||||||||    
T  10744301 tataagctgttttcataagctgtcttagagaacttataaaaataagatgaaaacagcttatgaa 10744364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 12 - 127
Target Start/End: Original strand, 17269251 - 17269365
Alignment:
Q  12 ataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaaca 111  Q
    |||||||||||| ||||||| || ||||||||||| |  | |||| | ||||||||| ||||| || ||| || | | ||||||||||  || |||||||    
T  17269251 ataagttgttttcataagctatcctggagagcttacggtaataagttaaaaacaactcatgaacatgtca-taaggtattttcataagcactaccaaaca 17269349  T
Q  112 atctcataagtgttta 127  Q
    |||||| |||||||||    
T  17269350 atctcacaagtgttta 17269365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 165
Target Start/End: Original strand, 17420277 - 17420355
Alignment:
Q  86 gttgttttcataagttcttccaaacaatctcataagtgtttatgttagtagataaactcaaatgaaccaattcaaacagg 165  Q
    |||||||||||||| ||||| ||||| ||| | ||||||||||| || || | |||||||||| |||||||| |||||||    
T  17420277 gttgttttcataagctcttcaaaacagtctaacaagtgtttatgctaata-aaaaactcaaataaaccaattgaaacagg 17420355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 161
Target Start/End: Complemental strand, 18327142 - 18327067
Alignment:
Q  86 gttgttttcataagttcttccaaacaatctcataagtgtttatgttagtagataaactcaaatgaaccaattcaaa 161  Q
    |||||||||||||||||||||||| | | ||| ||||| |||||  ||||||||| ||||||| | ||||| ||||    
T  18327142 gttgttttcataagttcttccaaatagtgtcaaaagtgcttatgacagtagataagctcaaataagccaatccaaa 18327067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 28077132 - 28077069
Alignment:
Q  18 tgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttca 81  Q
    |||||| ||||||| | || ||||||||||  || |||||||||||||||||||||| ||||||    
T  28077132 tgttttcataagctattttagagagcttattgaaataagctgaaaacaacttatgaacatttca 28077069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 53 - 148
Target Start/End: Complemental strand, 40414050 - 40413956
Alignment:
Q  53 taagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaacaatctcataagtgtttatgttagtagataaactcaaat 148  Q
    |||| ||||||||||||||| | ||||||  | |||| |||| |||||||| ||||||||||| | ||||||| ||||  || |||||||||||||    
T  40414050 taagttgaaaacaacttatggacatttcatca-gttgctttcgtaagttctcccaaacaatcttacaagtgttgatgtcggttgataaactcaaat 40413956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 54 - 129
Target Start/End: Complemental strand, 42757204 - 42757130
Alignment:
Q  54 aagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaacaatctcataagtgtttatg 129  Q
    |||||||||||| ||||||||||| | | || ||||||||| |||||||||||||||| | ||| ||||| |||||    
T  42757204 aagctgaaaacagcttatgaatatgtaa-taagttgttttcgtaagttcttccaaacagtgtcacaagtggttatg 42757130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 51688705 - 51688767
Alignment:
Q  11 tataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 74  Q
    |||||||||||||  |||||| || |||||| ||||||||||||||||||||| ||||| ||||    
T  51688705 tataagttgttttcgtaagctatcgtggaga-cttatgaaattaagctgaaaaaaacttctgaa 51688767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 3924628 - 3924713
Alignment:
Q  15 agttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagtt 101  Q
    ||||||||| ||||||| || || |||| ||||| || ||||| ||||||||||||| || |||||| ||  |||||||||||||||    
T  3924628 agttgtttttataagctatcctgaagagtttatggaaataagccgaaaacaacttataaacatttca-taaattgttttcataagtt 3924713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 148
Target Start/End: Original strand, 4757412 - 4757474
Alignment:
Q  86 gttgttttcataagttcttccaaacaatctcataagtgtttatgttagtagataaactcaaat 148  Q
    |||||||||||||||||| |||||   ||||| |||||||||||| | ||||||| |||||||    
T  4757412 gttgttttcataagttctgccaaatggtctcacaagtgtttatgtcaatagataagctcaaat 4757474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 46
Target Start/End: Complemental strand, 5421997 - 5421955
Alignment:
Q  4 tataagttataagttgttttgataagctgtcttggagagctta 46  Q
    |||||| ||||||||||||||||||||| |||| |||||||||    
T  5421997 tataagctataagttgttttgataagctatcttagagagctta 5421955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 128
Target Start/End: Original strand, 8810080 - 8810118
Alignment:
Q  90 ttttcataagttcttccaaacaatctcataagtgtttat 128  Q
    |||||||||||||||||||||||||||| ||||| ||||    
T  8810080 ttttcataagttcttccaaacaatctcagaagtgattat 8810118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 140
Target Start/End: Original strand, 15581328 - 15581382
Alignment:
Q  86 gttgttttcataagttcttccaaacaatctcataagtgtttatgttagtagataa 140  Q
    ||||||| ||| || ||||||||||||||||| ||||| |||||| |||||||||    
T  15581328 gttgtttccattagctcttccaaacaatctcacaagtgcttatgtcagtagataa 15581382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 140
Target Start/End: Original strand, 28348729 - 28348783
Alignment:
Q  86 gttgttttcataagttcttccaaacaatctcataagtgtttatgttagtagataa 140  Q
    ||||||||| |||  |||| |||||||||||| ||||||||||| ||||||||||    
T  28348729 gttgttttcgtaatatctttcaaacaatctcacaagtgtttatgctagtagataa 28348783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 29793774 - 29793836
Alignment:
Q  3 gtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaaca 65  Q
    ||||||| |||||||||  || ||||||| |||| |||||||||||||| |||| ||||||||    
T  29793774 gtataagctataagttgagttcataagctatcttcgagagcttatgaaactaagttgaaaaca 29793836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 35017583 - 35017637
Alignment:
Q  18 tgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatg 72  Q
    |||||| |||||||||| ||||||||||||| || |||| |||||| ||||||||    
T  35017583 tgttttcataagctgtcctggagagcttatggaaataagttgaaaataacttatg 35017637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 72
Target Start/End: Original strand, 35179134 - 35179200
Alignment:
Q  6 taagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatg 72  Q
    ||||||||||| |||||| ||||| | |  |||||| ||||||||| ||||||||||||| ||||||    
T  35179134 taagttataagctgttttcataagttattatggagaacttatgaaaataagctgaaaacagcttatg 35179200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 125
Target Start/End: Complemental strand, 38170732 - 38170647
Alignment:
Q  39 agagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaacaatctcataagtgtt 125  Q
    |||||||| ||||  ||||||||||||||||||||| || ||| || | |||||||||||| ||| |||| || ||||| |||||||    
T  38170732 agagcttaggaaaacaagctgaaaacaacttatgaacatgtca-taagctgttttcataagctctcccaagcagtctcacaagtgtt 38170647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 38578517 - 38578638
Alignment:
Q  1 ttgtataagttataagttgttttgataagctgtcttggagagcttatgaaat-taagctgaaaacaacttatgaatatttcagtacgttgttttcataag 99  Q
    ||||||||| ||||||||||||  |||| || |   | |||| ||||||||  |||||| |||||||||||||||||| | | || ||||||||||||||    
T  38578517 ttgtataagctataagttgtttacataaactattgagaagagtttatgaaaaataagctcaaaacaacttatgaatatgtta-taagttgttttcataag 38578615  T
Q  100 ttcttccaaacaatctcataagt 122  Q
    ||  |||||||| ||||| ||||    
T  38578616 ttagtccaaacagtctcacaagt 38578638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 167
Target Start/End: Complemental strand, 4034009 - 4033932
Alignment:
Q  90 ttttcataagttcttccaaacaatctcataagtgtttatgttagtagataaactcaaatgaaccaattcaaacaggtt 167  Q
    |||||||||| |||  |||||||||||| |||||||||||  |||||| ||  ||||||||  |||| ||||||||||    
T  4034009 ttttcataagctctctcaaacaatctcacaagtgtttatgccagtagacaagttcaaatgagtcaatgcaaacaggtt 4033932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 74
Target Start/End: Original strand, 8016279 - 8016320
Alignment:
Q  33 tcttggagagcttatgaaattaagctgaaaacaacttatgaa 74  Q
    |||||||||||||| |||| |||||||||||||| |||||||    
T  8016279 tcttggagagcttaggaaaataagctgaaaacaagttatgaa 8016320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 16322845 - 16322910
Alignment:
Q  7 aagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatg 72  Q
    |||||||||| |||||| ||| ||| | ||| |||||||||| || |||||| |||||||||||||    
T  16322845 aagttataagctgttttcataggctattttgaagagcttatggaaataagctaaaaacaacttatg 16322910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 27963444 - 27963379
Alignment:
Q  7 aagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatg 72  Q
    ||||| ||||||||||| ||||||| |  ||||||||||||  || |||||| |||||||||||||    
T  27963444 aagttctaagttgttttcataagctattatggagagcttatataaataagctaaaaacaacttatg 27963379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 28482310 - 28482237
Alignment:
Q  4 tataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatat 77  Q
    |||||| |||||| |||||| ||||| | |||||||||||||| |||| |||||| |||| |  ||||||||||    
T  28482310 tataagctataagctgtttttataagttatcttggagagcttacgaaaataagctaaaaatagtttatgaatat 28482237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 166
Target Start/End: Complemental strand, 33723422 - 33723298
Alignment:
Q  41 agcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaacaatctcataagtgtttatgttagtagataa 140  Q
    |||||||| || ||||||||||||| || ||||| || |||  | | ||||| |||||||| | |||| || ||||| ||||||||||| ||||||||||    
T  33723422 agcttatggaaataagctgaaaacatctcatgaacatgtcatga-gctgtttccataagttttcccaagcagtctcacaagtgtttatggtagtagataa 33723324  T
Q  141 actcaaatgaaccaattcaaacaggt 166  Q
      |||||| |  |||| |||||||||    
T  33723323 gttcaaataagtcaatccaaacaggt 33723298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 163
Target Start/End: Original strand, 36070255 - 36070332
Alignment:
Q  86 gttgttttcataagttcttccaaacaatctcataagtgtttatgttagtagataaactcaaatgaaccaattcaaaca 163  Q
    |||||||||||||||||| | ||||| ||||| ||||| |||||  || ||||||  |||||| ||||||| ||||||    
T  36070255 gttgttttcataagttctcctaaacagtctcacaagtgcttatgccagaagataatatcaaataaaccaatccaaaca 36070332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 38116146 - 38116089
Alignment:
Q  13 taagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaactta 70  Q
    |||||||||||  |||| | ||||||||| ||||||||| ||||||| ||||||||||    
T  38116146 taagttgttttcttaagttatcttggagaacttatgaaagtaagctggaaacaactta 38116089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 38247133 - 38247060
Alignment:
Q  1 ttgtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 74  Q
    ||||||||  ||||||||| ||| || | || || |||||||||||| ||| |||| |||||||||||||||||    
T  38247133 ttgtataaactataagttgctttcatgatctatcgtggagagcttataaaagtaagttgaaaacaacttatgaa 38247060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 38882991 - 38882919
Alignment:
Q  1 ttgtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 74  Q
    ||||||||  ||||||||||||| ||||||| || | |||| ||||||||| |||| |||||||| ||||||||    
T  38882991 ttgtataaaatataagttgttttcataagctctc-tagagaacttatgaaaataagttgaaaacaccttatgaa 38882919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 39348037 - 39347976
Alignment:
Q  11 tataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatg 72  Q
    ||||||||||||| |||| || || || | |||||||| || ||||||||||||||||||||    
T  39348037 tataagttgttttcataaactatcctgcaaagcttatggaaataagctgaaaacaacttatg 39347976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 39596587 - 39596648
Alignment:
Q  1 ttgtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaa 62  Q
    ||||||||| |||||| || ||| ||||||| ||||||||||||||| ||| |||| |||||    
T  39596587 ttgtataagctataagatggttttataagctatcttggagagcttataaaaataagttgaaa 39596648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 42174845 - 42174918
Alignment:
Q  1 ttgtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 74  Q
    ||||||| | ||||||||||||| ||||| | | ||||||| ||||||||| |||| | |||||| ||||||||    
T  42174845 ttgtatatgctataagttgtttttataagttatattggagaacttatgaaaataagttaaaaacagcttatgaa 42174918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 73
Target Start/End: Original strand, 47877134 - 47877171
Alignment:
Q  36 tggagagcttatgaaattaagctgaaaacaacttatga 73  Q
    |||| ||||||||||| |||||||||||||||||||||    
T  47877134 tggaaagcttatgaaaataagctgaaaacaacttatga 47877171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 4622086 - 4622154
Alignment:
Q  4 tataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatg 72  Q
    |||||| |||||| |||||  ||| ||| ||||||||||||| ||||| |||||| |||||| ||||||    
T  4622086 tataagctataagctgtttccatatgctatcttggagagcttgtgaaaataagctaaaaacagcttatg 4622154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 10809335 - 10809399
Alignment:
Q  1 ttgtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaaca 65  Q
    |||| |||| ||||||||||| | || |||| | ||||||| ||||||||| |||||||||||||    
T  10809335 ttgtgtaagctataagttgttctcatcagctatattggagaacttatgaaaataagctgaaaaca 10809399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 12564951 - 12564883
Alignment:
Q  4 tataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatg 72  Q
    |||||| ||||||||||||| ||||||| ||||  || ||||| | || ||||||||||||| ||||||    
T  12564951 tataagctataagttgttttcataagctatcttttagtgcttacggaaataagctgaaaacagcttatg 12564883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 15558207 - 15558279
Alignment:
Q  1 ttgtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatga 73  Q
    ||||| |||||||||| |||||| ||||| | || | |||| |||||  || |||||||||||||||||||||    
T  15558207 ttgtaaaagttataagctgttttcataagatatcctagagaacttatagaaataagctgaaaacaacttatga 15558279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 27887195 - 27887127
Alignment:
Q  4 tataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatg 72  Q
    |||||| ||||||||||||| |||| || || |||||||| ||| ||| |||||| ||||||| |||||    
T  27887195 tataagctataagttgttttcataaactatcatggagagcatataaaaataagctaaaaacaatttatg 27887127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 30371141 - 30371209
Alignment:
Q  4 tataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatg 72  Q
    |||||| ||||||||||||| |||||   | ||||||||| |||  || ||||||||||||||||||||    
T  30371141 tataagctataagttgttttcataagacattttggagagcgtattgaaataagctgaaaacaacttatg 30371209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 1e-22; HSPs: 70)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 148
Target Start/End: Original strand, 28615334 - 28615470
Alignment:
Q  11 tataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaa-caacttatgaatatttcagtacgttgttttcataagttcttccaaa 109  Q
    ||||||||||||| ||||||| |  || ||||||||||||| |||||  |||| ||||||||||| || ||| || | |||||||||||||||| |||||    
T  28615334 tataagttgttttcataagctataatgaagagcttatgaaaataagccaaaaaacaacttatgaaaatgtcatta-gctgttttcataagttct-ccaaa 28615431  T
Q  110 caatctcataagtgtttatgttagtagataaactcaaat 148  Q
    |||||||| ||||||||||| ||||||||||||| ||||    
T  28615432 caatctcacaagtgtttatgctagtagataaacttaaat 28615470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 130
Target Start/End: Original strand, 2996566 - 2996691
Alignment:
Q  4 tataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttct 103  Q
    |||||||||||||||||||| ||||||| ||||||||||| ||||||| |||| |||||| | |||||| | || ||| || |||||||||||||| |||    
T  2996566 tataagttataagttgttttcataagctatcttggagagcgtatgaaaataagttgaaaaaagcttatggacatgtca-taagttgttttcataagctct 2996664  T
Q  104 tccaaacaatctcataagtgtttatgt 130  Q
      |||||| ||||| ||||| ||||||    
T  2996665 ctcaaacagtctcaaaagtgcttatgt 2996691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 7 - 117
Target Start/End: Complemental strand, 52315271 - 52315161
Alignment:
Q  7 aagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttcc 106  Q
    ||||||||||||||||  ||||||| | ||||| | ||||||||| |||||||||| ||||||||||||| |    || |||||||| ||||||||||||    
T  52315271 aagttataagttgtttccataagctattttggaaaacttatgaaaataagctgaaagcaacttatgaataatgtgataagttgttttgataagttcttcc 52315172  T
Q  107 aaacaatctca 117  Q
    |||||||||||    
T  52315171 aaacaatctca 52315161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 17884058 - 17884131
Alignment:
Q  1 ttgtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 74  Q
    ||||||||||||| ||||||||| ||||||| | ||||||||||||||||| | ||||||||||||||||||||    
T  17884058 ttgtataagttatcagttgttttcataagctatattggagagcttatgaaaattagctgaaaacaacttatgaa 17884131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 148
Target Start/End: Complemental strand, 18628620 - 18628487
Alignment:
Q  4 tataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttct 103  Q
    ||||||||||||  |||||| ||||| | |||||||||||||||| || |||||||||||||||||          || || |||||||||||||| |||    
T  18628620 tataagttataaactgttttcataagttatcttggagagcttatggaaataagctgaaaacaactt----------ca-taagttgttttcataagctct 18628532  T
Q  104 tccaaacaatctcataagtgtttatgttagtagataaactcaaat 148  Q
     ||||||| ||||| |||||||||||| ||||||||| |||||||    
T  18628531 cccaaacagtctcacaagtgtttatgtcagtagataagctcaaat 18628487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 137
Target Start/End: Complemental strand, 4798633 - 4798511
Alignment:
Q  14 aagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaacaat 113  Q
    |||||||||| ||||||| |||||||||||||||| || |||||| |||||| |||||| | || |||| | |  |||| |||||| |||||| |||| |    
T  4798633 aagttgttttcataagctatcttggagagcttatgcaaataagctcaaaacagcttatgtacatgtcag-aagccgtttccataagctcttcctaacagt 4798535  T
Q  114 ctcataagtgtttatgttagtaga 137  Q
    |||| |||||||| ||||| ||||    
T  4798534 ctcacaagtgtttttgttaataga 4798511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 16494882 - 16494816
Alignment:
Q  4 tataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaactta 70  Q
    |||||| ||||||||||||| ||||||| ||||||||||||| | ||| |||| |||||||||||||    
T  16494882 tataagctataagttgttttcataagctatcttggagagcttgtaaaactaagttgaaaacaactta 16494816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 11 - 165
Target Start/End: Complemental strand, 21731726 - 21731573
Alignment:
Q  11 tataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaac 110  Q
    ||||||||||||| ||||||| | |||||||  |||||||| |||| |||||| |  ||||||| |||    || | |||||||||||||||| ||||||    
T  21731726 tataagttgtttttataagctatattggagaatttatgaaagtaagttgaaaaaagtttatgaaaattgtgataagctgttttcataagttctcccaaac 21731627  T
Q  111 aatctcataagtgtttatgttagtagataaactcaaatgaaccaattcaaacagg 165  Q
    ||||||| ||    |||||| ||||||||  ||||||| ||||||| ||||||||    
T  21731626 aatctcacaa-aacttatgtcagtagatatgctcaaataaaccaatccaaacagg 21731573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 148
Target Start/End: Complemental strand, 42641714 - 42641573
Alignment:
Q  8 agttataagttgttttgataagctgtcttggagagcttatgaaat-taagctg-aaaacaacttatgaatatttcagtacgttgttttcataagttcttc 105  Q
    |||||||||||||||| ||||||| | |||| ||||||||||||| ||||||| |||||| ||| |||| || ||| || | |||||||||||||||||     
T  42641714 agttataagttgttttcataagctattttggtgagcttatgaaatataagctgcaaaacagcttgtgaacatgtca-taaggtgttttcataagttcttg 42641616  T
Q  106 caaacaatctcataagtgtttatgttagtagataaactcaaat 148  Q
     ||||| | ||| ||||||| | |  ||||||||| |||||||    
T  42641615 aaaacagtatcacaagtgttcacgccagtagataagctcaaat 42641573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 93 - 147
Target Start/End: Complemental strand, 51555759 - 51555705
Alignment:
Q  93 tcataagttcttccaaacaatctcataagtgtttatgttagtagataaactcaaa 147  Q
    ||||||| ||||| ||||||||||||||||| |||||| ||||||||||||||||    
T  51555759 tcataagctcttctaaacaatctcataagtgcttatgtgagtagataaactcaaa 51555705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 53673721 - 53673667
Alignment:
Q  18 tgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatg 72  Q
    |||||| ||||||| |||||||||||||||| || ||||||||||||||||||||    
T  53673721 tgttttcataagctatcttggagagcttatgtaaataagctgaaaacaacttatg 53673667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 7694090 - 7694017
Alignment:
Q  1 ttgtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 74  Q
    ||||||||| |||||| |||||| ||||| | || ||||||| ||||| || ||||||||||||||||||||||    
T  7694090 ttgtataagctataagctgttttcataagttatcctggagagtttatggaaataagctgaaaacaacttatgaa 7694017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 4 - 164
Target Start/End: Original strand, 42866061 - 42866220
Alignment:
Q  4 tataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttct 103  Q
    |||||| ||||||||||||| ||||||| || | ||||||||||| || |||||| ||| || |||||| | || ||| ||   ||||| ||||||||||    
T  42866061 tataagctataagttgttttcataagctatccttgagagcttatggaagtaagctaaaagcatcttatggacatatca-tagaatgtttacataagttct 42866159  T
Q  104 tccaaacaatctcataagtgtttatgttagtagataaactcaaatgaaccaattcaaacag 164  Q
     ||||| | ||||| | |||||||||  |||| |||||||||||  | ||||| |||||||    
T  42866160 cccaaagagtctcaaaggtgtttatgccagtaaataaactcaaacaagccaatccaaacag 42866220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 17822935 - 17822872
Alignment:
Q  11 tataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 74  Q
    ||||||||||||| ||||||| ||||||||| ||||||||| |||||| |||| | ||||||||    
T  17822935 tataagttgttttcataagctatcttggagaacttatgaaaataagctaaaaaaagcttatgaa 17822872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 162
Target Start/End: Complemental strand, 32831559 - 32831438
Alignment:
Q  39 agagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaacaatctcataagtgtttatgttagtagat 138  Q
    |||||||||||||| |||||||||| | ||||||||||| | | || |||||||||||  ||||| |||||   | ||| ||||| |||||| |||||||    
T  32831559 agagcttatgaaat-aagctgaaaatatcttatgaatatgtta-taagttgttttcatctgttctcccaaaaggtatcaaaagtgcttatgtcagtagat 32831462  T
Q  139 aaactcaaatgaaccaattcaaac 162  Q
    || ||||||||| ||||| |||||    
T  32831461 aagctcaaatgagccaatccaaac 32831438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 36722746 - 36722687
Alignment:
Q  4 tataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaa 63  Q
    |||||||||||||||||||||||||| | || || ||||||||||||| |||||| ||||    
T  36722746 tataagttataagttgttttgataagttatcctgaagagcttatgaaaataagcttaaaa 36722687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 49202637 - 49202708
Alignment:
Q  3 gtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 74  Q
    ||||||| |||||||||||||  |||||| ||||||| | || |||||| |||| |||||||||||||||||    
T  49202637 gtataagctataagttgttttcgtaagctatcttggataactaatgaaaataagttgaaaacaacttatgaa 49202708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 70
Target Start/End: Original strand, 10192277 - 10192342
Alignment:
Q  4 tataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaactta 70  Q
    |||||||||||||||||||| | ||||| || |||||||| ||||||| |||| |||||||||||||    
T  10192277 tataagttataagttgttttcaaaagctatcctggagagc-tatgaaaataagttgaaaacaactta 10192342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 65
Target Start/End: Complemental strand, 11158431 - 11158373
Alignment:
Q  7 aagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaaca 65  Q
    ||||||||||||||||| ||||||| |||| |||||||| || || |||||||||||||    
T  11158431 aagttataagttgttttcataagctatcttagagagcttgtggaaataagctgaaaaca 11158373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 29263371 - 29263433
Alignment:
Q  12 ataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 74  Q
    |||||||||||| ||||||| || || ||||||| || || ||||||||||||||||||||||    
T  29263371 ataagttgttttcataagctatcctgcagagcttgtggaaataagctgaaaacaacttatgaa 29263433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 148
Target Start/End: Complemental strand, 33534212 - 33534103
Alignment:
Q  38 gagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaacaatctcataagtgtttatgttagtaga 137  Q
    |||||||||||||| |||||||||||||||||||| |||| |||  |  ||||||||||||| |||  |||| | ||||| ||||  |||||| | ||||    
T  33534212 gagagcttatgaaaataagctgaaaacaacttatggatatgtca-caatttgttttcataagctctctcaaatactctcacaagtacttatgtcactaga 33534114  T
Q  138 taaactcaaat 148  Q
    ||| |||||||    
T  33534113 taagctcaaat 33534103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 40532655 - 40532601
Alignment:
Q  20 ttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 74  Q
    |||| ||||||||||||||||||| || |||| |||| |||||||||||||||||    
T  40532655 ttttcataagctgtcttggagagcctacgaaaataagatgaaaacaacttatgaa 40532601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 47145971 - 47146025
Alignment:
Q  20 ttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 74  Q
    |||| |||| |||||||| ||||||||||||| |||| |||||||||||||||||    
T  47145971 ttttcataaactgtcttgaagagcttatgaaaataaggtgaaaacaacttatgaa 47146025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 95 - 148
Target Start/End: Original strand, 1017111 - 1017164
Alignment:
Q  95 ataagttcttccaaacaatctcataagtgtttatgttagtagataaactcaaat 148  Q
    ||||||||||||||||| ||||| |||||||||||| ||||||| | |||||||    
T  1017111 ataagttcttccaaacagtctcacaagtgtttatgtcagtagattagctcaaat 1017164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 127
Target Start/End: Original strand, 1137739 - 1137827
Alignment:
Q  38 gagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaacaatctcataagtgttta 127  Q
    ||||||||||| || ||| |||||||||||||||||| || ||| || | |||||||||||||||| | ||||| | ||| |||||||||    
T  1137739 gagagcttatggaaataaactgaaaacaacttatgaacatgtca-taagatgttttcataagttctcctaaacagtgtcacaagtgttta 1137827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 117
Target Start/End: Original strand, 23819082 - 23819194
Alignment:
Q  4 tataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttct 103  Q
    ||||||||||||  |||||| ||||||| ||||| |||||||||  || |||| ||||||||||||||| | || ||| || | ||||||| |||  |||    
T  23819082 tataagttataacatgttttcataagctatcttgaagagcttatagaaataagatgaaaacaacttatggacatgtca-taagctgttttcttaaactct 23819180  T
Q  104 tccaaacaatctca 117  Q
    |||||||| |||||    
T  23819181 tccaaacagtctca 23819194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 30668433 - 30668384
Alignment:
Q  14 aagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaa 63  Q
    |||||||||| ||||||| ||||||| || ||||||||||||||||||||    
T  30668433 aagttgtttttataagctatcttggatagtttatgaaattaagctgaaaa 30668384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 55 - 148
Target Start/End: Complemental strand, 37575962 - 37575870
Alignment:
Q  55 agctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaacaatctcataagtgtttatgttagtagataaactcaaat 148  Q
    ||||||||||||||||||| ||| | | || ||| ||||||||||||||  |||||||| |||  || ||||||| ||| ||||||||||||||    
T  37575962 agctgaaaacaacttatgagtatgtta-taagttattttcataagttctctcaaacaatgtcacgagagtttatgctagcagataaactcaaat 37575870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 64
Target Start/End: Original strand, 47800623 - 47800676
Alignment:
Q  11 tataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaac 64  Q
    |||||| |||||| ||||||| ||||| ||||||||||||| ||||||||||||    
T  47800623 tataagctgttttcataagctatcttgaagagcttatgaaaataagctgaaaac 47800676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 55084549 - 55084488
Alignment:
Q  13 taagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 74  Q
    ||||||||||| || |||| |||| |||||||||||||| |||||||||| || ||||||||    
T  55084549 taagttgttttcatgagctatcttagagagcttatgaaaataagctgaaaccagcttatgaa 55084488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 56480339 - 56480388
Alignment:
Q  2 tgtataagttataagttgttttgataagctgtcttggagagcttatgaaa 51  Q
    ||||||||||||||| |||||| |||| || |||||||||||||||||||    
T  56480339 tgtataagttataagctgttttcataaactatcttggagagcttatgaaa 56480388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 1404416 - 1404472
Alignment:
Q  10 ttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaa 66  Q
    |||||||| ||||| |||| || || |||||||||||||||| ||||||||||||||    
T  1404416 ttataagtggttttcataaactatcatggagagcttatgaaagtaagctgaaaacaa 1404472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 27970051 - 27970095
Alignment:
Q  4 tataagttataagttgttttgataagctgtcttggagagcttatg 48  Q
    |||||||||||| ||||||| |||||||||| |||||||||||||    
T  27970051 tataagttataacttgttttcataagctgtcatggagagcttatg 27970095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 49219132 - 49219200
Alignment:
Q  4 tataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatg 72  Q
    |||||| ||||||||||||| |||| || ||||  |||| ||||| || ||||||||||||||||||||    
T  49219132 tataagctataagttgttttcataaactatcttaaagagattatggaaataagctgaaaacaacttatg 49219200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 11802528 - 11802595
Alignment:
Q  5 ataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatg 72  Q
    ||||| || |||||||||| ||||||| |  |||||||||||||| | ||||||||||||| ||||||    
T  11802528 ataagctacaagttgttttcataagctattatggagagcttatgagaataagctgaaaacagcttatg 11802595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 88 - 139
Target Start/End: Original strand, 22471350 - 22471401
Alignment:
Q  88 tgttttcataagttcttccaaacaatctcataagtgtttatgttagtagata 139  Q
    |||||||||||||||| ||||||| ||||| ||||| |||||| ||||||||    
T  22471350 tgttttcataagttctcccaaacagtctcacaagtgcttatgtcagtagata 22471401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 89 - 148
Target Start/End: Complemental strand, 25487550 - 25487491
Alignment:
Q  89 gttttcataagttcttccaaacaatctcataagtgtttatgttagtagataaactcaaat 148  Q
    |||| |||||| ||||||||||||||| | ||||| ||||| || |||||||||||||||    
T  25487550 gtttgcataagctcttccaaacaatcttacaagtgcttatgctaatagataaactcaaat 25487491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 161
Target Start/End: Complemental strand, 8328114 - 8328040
Alignment:
Q  87 ttgttttcataagttcttccaaacaatctcataagtgtttatgttagtagataaactcaaatgaaccaattcaaa 161  Q
    ||||||||||||| | ||||||||| ||||||||||| |||||  | ||||||| |||||||  | |||||||||    
T  8328114 ttgttttcataagctattccaaacagtctcataagtgcttatgccaatagataagctcaaatacatcaattcaaa 8328040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 17975438 - 17975380
Alignment:
Q  12 ataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaactta 70  Q
    ||||| |||||| ||||||| ||||||||||||| || || |||||| |||||||||||    
T  17975438 ataagctgtttttataagctatcttggagagcttctggaaataagctaaaaacaactta 17975380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 141
Target Start/End: Complemental strand, 22772459 - 22772417
Alignment:
Q  99 gttcttccaaacaatctcataagtgtttatgttagtagataaa 141  Q
    ||||| ||||||||||||| ||||||||||| |||||||||||    
T  22772459 gttctcccaaacaatctcaaaagtgtttatgctagtagataaa 22772417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 148
Target Start/End: Original strand, 24087410 - 24087472
Alignment:
Q  86 gttgttttcataagttcttccaaacaatctcataagtgtttatgttagtagataaactcaaat 148  Q
    ||||||| |||||||||| | ||||| | |   ||||||||||||||||||||||||||||||    
T  24087410 gttgtttccataagttctccaaaacagtttggcaagtgtttatgttagtagataaactcaaat 24087472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 148
Target Start/End: Original strand, 24091537 - 24091599
Alignment:
Q  86 gttgttttcataagttcttccaaacaatctcataagtgtttatgttagtagataaactcaaat 148  Q
    ||||||| |||||||||| | ||||| | |   ||||||||||||||||||||||||||||||    
T  24091537 gttgtttccataagttctccaaaacagtttggcaagtgtttatgttagtagataaactcaaat 24091599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 109
Target Start/End: Original strand, 25332807 - 25332873
Alignment:
Q  43 cttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaa 109  Q
    ||||||||| |||||||||||||||||||||||| | |  || |||||||||  ||||||| |||||    
T  25332807 cttatgaaaataagctgaaaacaacttatgaataatgccataagttgttttcgcaagttctcccaaa 25332873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 125
Target Start/End: Original strand, 27721717 - 27721830
Alignment:
Q  11 tataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaac 110  Q
    |||||| |||||| ||||| | || ||||||||||  |||| ||||||||||||| |||||| |||| ||| || || ||||| ||||| |||   ||||    
T  27721717 tataagctgttttcataagttatcctggagagcttgcgaaaataagctgaaaacagcttatggatatgtca-taagtagtttttataagctctcttaaac 27721815  T
Q  111 aatctcataagtgtt 125  Q
    ||||||| |||||||    
T  27721816 aatctcacaagtgtt 27721830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 28300379 - 28300278
Alignment:
Q  1 ttgtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagt 100  Q
    ||||||||| |||||  | |||| ||| ||| ||||| ||||||||||||| |||| ||||||||||||| ||| || ||| || | ||||||||||| |    
T  28300379 ttgtataagctataaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtca-taggctgttttcataaat 28300281  T
Q  101 tct 103  Q
    |||    
T  28300280 tct 28300278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 30207648 - 30207582
Alignment:
Q  4 tataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaactta 70  Q
    |||||| ||||||||||||| |||||||  ||| ||||| ||||| || ||||||||||||| ||||    
T  30207648 tataagctataagttgttttcataagctaccttagagagattatggaaataagctgaaaacagctta 30207582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 139
Target Start/End: Complemental strand, 39178259 - 39178209
Alignment:
Q  89 gttttcataagttcttccaaacaatctcataagtgtttatgttagtagata 139  Q
    ||||||||||||||| ||||||| | ||| |||||||||||| ||||||||    
T  39178259 gttttcataagttctcccaaacagtgtcaaaagtgtttatgtcagtagata 39178209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 43824276 - 43824346
Alignment:
Q  4 tataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 74  Q
    ||||||||||||| | ||||  |||| | || |||| |||||||| || ||||||||||||||||||||||    
T  43824276 tataagttataagcttttttcgtaagttatcctggaaagcttatggaaataagctgaaaacaacttatgaa 43824346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 163
Target Start/End: Complemental strand, 46019697 - 46019548
Alignment:
Q  13 taagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaacaa 112  Q
    ||||||||||| ||||| | ||  | ||||||||||||  |||| |||||||||||||| || || ||| || ||| | || ||||  |||| || ||||    
T  46019697 taagttgttttcataagttatcccgaagagcttatgaatataagttgaaaacaacttatcaacatgtca-taagttctgtttataaactctttcagacaa 46019599  T
Q  113 tctcataagtgtttatgttagtagataaactcaaatgaaccaattcaaaca 163  Q
    ||||| |||| |||||  ||||| |||| ||||||| || |||||||||||    
T  46019598 tctcacaagtttttatactagtacataagctcaaataaatcaattcaaaca 46019548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 100
Target Start/End: Original strand, 46110230 - 46110291
Alignment:
Q  38 gagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagt 100  Q
    ||||||||||  || ||||||||||||||||||||| ||| ||| || |||||||||||||||    
T  46110230 gagagcttatagaaataagctgaaaacaacttatgagtatatca-taagttgttttcataagt 46110291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 148
Target Start/End: Complemental strand, 46415866 - 46415725
Alignment:
Q  7 aagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttcc 106  Q
    |||||||||||| |||| ||||||| || | |||||||||  ||| | |||||||||||||||||| | || ||| || ||||||| |||||  ||| ||    
T  46415866 aagttataagttcttttcataagctatcctcgagagcttagtaaaattagctgaaaacaacttatggacatgtca-taggttgtttgcataaactctccc 46415768  T
Q  107 -aaacaatctcataagtgtttatgttagtagataaactcaaat 148  Q
     ||||| ||||||||||   ||||| ||| ||| |||||||||    
T  46415767 aaaacagtctcataagttcctatgtcagtggatgaactcaaat 46415725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 126
Target Start/End: Complemental strand, 50800106 - 50799986
Alignment:
Q  4 tataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttct 103  Q
    |||||| |||||| ||||||  |||||| || |||||| |||  ||||| |||||||||||| |||||  | || ||| || ||||||| ||| ||||||    
T  50800106 tataagctataagctgttttcttaagctatcatggagaactttggaaat-aagctgaaaacagcttatagacatgtca-taagttgtttacattagttct 50800009  T
Q  104 tccaaacaatctcataagtgttt 126  Q
     ||||||||||||| ||||||||    
T  50800008 cccaaacaatctcacaagtgttt 50799986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 71
Target Start/End: Original strand, 53792593 - 53792631
Alignment:
Q  33 tcttggagagcttatgaaattaagctgaaaacaacttat 71  Q
    |||||||||| |||||||| |||||||||||||||||||    
T  53792593 tcttggagagtttatgaaaataagctgaaaacaacttat 53792631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 70
Target Start/End: Complemental strand, 2592365 - 2592320
Alignment:
Q  25 ataagctgtcttggagagcttatgaaattaagctgaaaacaactta 70  Q
    ||||||| | |||||||||||||| || ||||||||||||||||||    
T  2592365 ataagctattttggagagcttatggaaataagctgaaaacaactta 2592320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 5131304 - 5131259
Alignment:
Q  27 aagctgtcttggagagcttatgaaattaagctgaaaacaacttatg 72  Q
    ||||| || ||||||||||||| || ||||||||||||||||||||    
T  5131304 aagctatcctggagagcttatggaaataagctgaaaacaacttatg 5131259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 70
Target Start/End: Original strand, 14011248 - 14011293
Alignment:
Q  25 ataagctgtcttggagagcttatgaaattaagctgaaaacaactta 70  Q
    ||||||| |||||||||||||||| || ||||||||||||| ||||    
T  14011248 ataagctatcttggagagcttatggaaataagctgaaaacagctta 14011293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 30377470 - 30377433
Alignment:
Q  26 taagctgtcttggagagcttatgaaattaagctgaaaa 63  Q
    |||||| ||||||||||||||||||| |||||||||||    
T  30377470 taagctatcttggagagcttatgaaaataagctgaaaa 30377433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 34398755 - 34398694
Alignment:
Q  11 tataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatg 72  Q
    |||||| |||||| ||||||  || ||||||||||||| || ||||| ||||||||||||||    
T  34398755 tataagctgttttcataagccatcatggagagcttatggaagtaagccgaaaacaacttatg 34398694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 35405947 - 35406016
Alignment:
Q  11 tataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttc 80  Q
    |||| |||||||| | ||| | || ||||||||||||| || ||||||||||||| |||||||| |||||    
T  35405947 tataggttgttttcaaaagttatcctggagagcttatggaagtaagctgaaaacagcttatgaacatttc 35406016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 44638250 - 44638187
Alignment:
Q  4 tataagttataagttgttttgataagctgtcttg--gagagcttatgaaattaagctgaaaacaa 66  Q
    |||||| ||||||||||||  ||||||| |||||  |||||||||||||| ||||||||||||||    
T  44638250 tataagctataagttgtttgtataagctatcttggagagagcttatgaaa-taagctgaaaacaa 44638187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 164
Target Start/End: Complemental strand, 51560331 - 51560207
Alignment:
Q  39 agagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaacaatctcataagtgtttatgttagtagat 138  Q
    |||| |||||| | |||||| ||||||| ||||||| || | | || | |||||||||||| ||| ||||| | ||||||||||| |||||  |||||||    
T  51560331 agagattatgagaataagctaaaaacaagttatgaacatgtga-taaggtgttttcataaggtctcccaaagagtctcataagtgcttatgccagtagat 51560233  T
Q  139 aaactcaaatgaaccaattcaaacag 164  Q
    || |||| || || ||||| ||||||    
T  51560232 aagctcatataaagcaattgaaacag 51560207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 158
Target Start/End: Complemental strand, 3549547 - 3549479
Alignment:
Q  90 ttttcataagttcttccaaacaatctcataagtgtttatgttagtagataaactcaaatgaaccaattc 158  Q
    ||||||||||||||  |||||| ||||||||||| |||||  | |||||||||| |||| | |||||||    
T  3549547 ttttcataagttctctcaaacagtctcataagtgcttatgccaatagataaactaaaataagccaattc 3549479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 8468941 - 8469009
Alignment:
Q  4 tataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatg 72  Q
    |||||| ||| ||||||||| ||||| | |  | |||||||||||||| ||| ||||||||||||||||    
T  8468941 tataagctattagttgttttcataagttattctagagagcttatgaaaataatctgaaaacaacttatg 8469009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 24169270 - 24169326
Alignment:
Q  18 tgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 74  Q
    |||||| | ||||| ||||||||||||||||||| |||| |||||| | ||||||||    
T  24169270 tgttttcacaagctatcttggagagcttatgaaaataagttgaaaaaatcttatgaa 24169326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 137
Target Start/End: Original strand, 24718746 - 24718790
Alignment:
Q  93 tcataagttcttccaaacaatctcataagtgtttatgttagtaga 137  Q
    ||||||||||  ||||||| |||||||||||||||||| ||||||    
T  24718746 tcataagttcgaccaaacagtctcataagtgtttatgtcagtaga 24718790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 42121479 - 42121539
Alignment:
Q  2 tgtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaa 62  Q
    |||||||| ||||||||||||| || |||| ||||||||| ||| || || ||||||||||    
T  42121479 tgtataagctataagttgttttcatgagctatcttggagaacttgtggaaataagctgaaa 42121539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 164
Target Start/End: Complemental strand, 42641492 - 42641416
Alignment:
Q  88 tgttttcataagttcttccaaacaatctcataagtgtttatgttagtagataaactcaaatgaaccaattcaaacag 164  Q
    ||||||||||||||||  |||||| | ||| ||||| |||||  ||||| ||| | ||||| |||||||||||||||    
T  42641492 tgttttcataagttctcgcaaacagtttcaaaagtgattatgacagtagttaagcacaaataaaccaattcaaacag 42641416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 47
Target Start/End: Original strand, 44797886 - 44797922
Alignment:
Q  11 tataagttgttttgataagctgtcttggagagcttat 47  Q
    ||||||||||||| ||||||||| |||||||||||||    
T  44797886 tataagttgtttttataagctgtattggagagcttat 44797922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 49803215 - 49803271
Alignment:
Q  18 tgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 74  Q
    |||||||||||||| ||||||||| |||| || | ||||||||||||| || |||||    
T  49803215 tgttttgataagctttcttggagaacttaagacaataagctgaaaacagctaatgaa 49803271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 52259631 - 52259683
Alignment:
Q  11 tataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaa 63  Q
    |||||| |||||| ||||||| ||| ||||||||||||||| |||| ||||||    
T  52259631 tataagctgtttttataagctatctgggagagcttatgaaaataagttgaaaa 52259683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 2e-21; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 141
Target Start/End: Original strand, 10031738 - 10031861
Alignment:
Q  17 ttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaacaatctc 116  Q
    ||||||| |||||||||||||||||||||| | || |||| ||||||||||||||| |||| || ||| |||| ||||||| | |||| |||||| ||||    
T  10031738 ttgtttttataagctgtcttggagagcttaaggaaataagatgaaaacaacttatggatatgtc-gtaagttggtttcataggctctttcaaacagtctc 10031836  T
Q  117 ataagtgtttatgttagtagataaa 141  Q
    | ||||| |||||| ||||||||||    
T  10031837 acaagtgcttatgtcagtagataaa 10031861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 20368260 - 20368153
Alignment:
Q  1 ttgtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagt 100  Q
    |||||| |||||||||||||||| ||||||| ||||||||| ||||||||| |||| |||||  | |||||||| || ||| || |||||||||||||||    
T  20368260 ttgtatgagttataagttgttttcataagctttcttggagaacttatgaaaataagttgaaactagcttatgaacatgtca-taagttgttttcataagt 20368162  T
Q  101 tcttccaaa 109  Q
    ||| |||||    
T  20368161 tctcccaaa 20368153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 35070547 - 35070401
Alignment:
Q  1 ttgtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagt 100  Q
    ||||| |||||||||| ||||||  |||||| | || |||||||||||||| |||| |||||||| |||||| || || |  || | |||||||||  ||    
T  35070547 ttgtacaagttataagctgtttttgtaagctatgtttgagagcttatgaaaataagttgaaaacagcttatg-atcttgccttaagctgttttcatttgt 35070449  T
Q  101 tcttccaaacaatctcataagtgtttatgttagtagataaactcaaat 148  Q
    ||| ||||||| || || ||||| |||||||||||||||| |||||||    
T  35070448 tctcccaaacagtcccacaagtgcttatgttagtagataagctcaaat 35070401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 31812093 - 31812036
Alignment:
Q  1 ttgtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagct 58  Q
    ||||||||| ||||||||||||| ||||||| ||||||||||||||||||| ||||||    
T  31812093 ttgtataagatataagttgttttcataagctatcttggagagcttatgaaaataagct 31812036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 109
Target Start/End: Original strand, 4006707 - 4006811
Alignment:
Q  4 tataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttct 103  Q
    |||||| ||||||||||||| ||||||| ||   ||||| |||||||| ||||||||||| |||||||| | || || ||| |||||||||| ||| |||    
T  4006707 tataagctataagttgttttcataagctatccctgagaggttatgaaaataagctgaaaataacttatggacatatc-gtaagttgttttcacaagctct 4006805  T
Q  104 tccaaa 109  Q
    ||||||    
T  4006806 tccaaa 4006811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 116
Target Start/End: Complemental strand, 34910486 - 34910374
Alignment:
Q  4 tataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa-tatttcagtacgttgttttcataagttc 102  Q
    |||||| ||||||||||| | |||| |||| ||||||| ||||||||| ||||| |||||||||| |||||  || ||| || | ||||||||||  |||    
T  34910486 tataagctataagttgttctcataatctgttttggagaacttatgaaagtaagcggaaaacaactcatgaacaatgtca-taagctgttttcatagtttc 34910388  T
Q  103 ttccaaacaatctc 116  Q
    ||||||||||||||    
T  34910387 ttccaaacaatctc 34910374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 2161014 - 2160946
Alignment:
Q  4 tataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatg 72  Q
    |||||| |||||||||||||  |||||||||||||| || ||||| || |||| |||||||||||||||    
T  2161014 tataagatataagttgttttcctaagctgtcttggaaagattatggaaataagttgaaaacaacttatg 2160946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 86 - 154
Target Start/End: Original strand, 27857432 - 27857500
Alignment:
Q  86 gttgttttcataagttcttccaaacaatctcataagtgtttatgttagtagataaactcaaatgaacca 154  Q
    |||||||||||||| ||| ||||||| | ||| |||||| ||||| ||||||||||||||||| |||||    
T  27857432 gttgttttcataagctctcccaaacagtttcacaagtgtctatgtcagtagataaactcaaataaacca 27857500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 106
Target Start/End: Original strand, 31624085 - 31624184
Alignment:
Q  6 taagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttc 105  Q
    |||| |||||| |||||| ||| ||| |||||||||  |||||||| |||| |||||||| |||||||| || ||| || | ||||||||||||||||||    
T  31624085 taagctataagctgttttcataggctatcttggagaaattatgaaaataagttgaaaacagcttatgaacatgtca-taagctgttttcataagttcttc 31624183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 34430541 - 34430469
Alignment:
Q  1 ttgtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatga 73  Q
    ||||||| |||||||| |||||| ||||||| |||||||||  |||||||| ||||||||||| | |||||||    
T  34430541 ttgtatatgttataaggtgttttcataagctatcttggagaagttatgaaaataagctgaaaaaagcttatga 34430469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 769129 - 769254
Alignment:
Q  1 ttgtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagt 100  Q
    ||||||||| |||||  |||||| |||||||  ||||  || |||| |||| |||| |||||||| |||||||| || ||| || | |||||||||||||    
T  769129 ttgtataagctataaactgttttcataagctaacttgagga-cttaagaaagtaagttgaaaacagcttatgaacatgtca-taagatgttttcataagt 769226  T
Q  101 tcttccaaacaatctcataagtgtttat 128  Q
    || |||||||| ||||| ||||||||||    
T  769227 tcatccaaacagtctcacaagtgtttat 769254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 6647380 - 6647450
Alignment:
Q  4 tataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 74  Q
    |||| |||||||  |||||| ||||||| |||| |||||||||||||| |||| |||||||| ||||||||    
T  6647380 tataggttataatctgttttcataagctatcttagagagcttatgaaaataagttgaaaacatcttatgaa 6647450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 9093634 - 9093572
Alignment:
Q  3 gtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaaca 65  Q
    ||||||| |||||| |||||| |||||||||||| |||| |||| |||| |||||||||||||    
T  9093634 gtataagctataagctgttttcataagctgtcttagagaacttaagaaaataagctgaaaaca 9093572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 148
Target Start/End: Complemental strand, 26559235 - 26559173
Alignment:
Q  86 gttgttttcataagttcttccaaacaatctcataagtgtttatgttagtagataaactcaaat 148  Q
    |||||||||||||||||||||||||| ||||| || || |||||  ||||| |||||||||||    
T  26559235 gttgttttcataagttcttccaaacagtctcacaaatgcttatgccagtaggtaaactcaaat 26559173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 120 - 166
Target Start/End: Complemental strand, 31672491 - 31672445
Alignment:
Q  120 agtgtttatgttagtagataaactcaaatgaaccaattcaaacaggt 166  Q
    ||||||||||| ||||||||||||||||| |||||||||||| ||||    
T  31672491 agtgtttatgtgagtagataaactcaaataaaccaattcaaataggt 31672445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 4420645 - 4420706
Alignment:
Q  13 taagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 74  Q
    |||||| ||||  |||||| |||||||||||||||| || ||||||||||||| ||||||||    
T  4420645 taagttattttcctaagctatcttggagagcttatggaaataagctgaaaacagcttatgaa 4420706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 33787822 - 33787761
Alignment:
Q  4 tataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaaca 65  Q
    ||||||||||||| |||||| ||||| | |||||||||||||||| || || ||||||||||    
T  33787822 tataagttataagctgttttcataagttatcttggagagcttatggaaataggctgaaaaca 33787761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 5564200 - 5564144
Alignment:
Q  9 gttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaaca 65  Q
    ||||| ||||||||| ||||||||||||| |||| ||||| || |||||||||||||    
T  5564200 gttatcagttgttttcataagctgtcttgaagagtttatgcaaataagctgaaaaca 5564144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 29296373 - 29296304
Alignment:
Q  1 ttgtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatg 72  Q
    ||||||||| |||||||||||||  |||||| ||||  | ||||||||||| ||||||||||| ||||||||    
T  29296373 ttgtataaggtataagttgttttcttaagctctctt--atagcttatgaaaataagctgaaaataacttatg 29296304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 105
Target Start/End: Original strand, 31420975 - 31421038
Alignment:
Q  41 agcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttc 105  Q
    ||||||||||| |||||||||||||||||||||||||   | || |||||||||||||| |||||    
T  31420975 agcttatgaaaataagctgaaaacaacttatgaatatgcga-taagttgttttcataagctcttc 31421038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 157
Target Start/End: Complemental strand, 34429703 - 34429639
Alignment:
Q  93 tcataagttcttccaaacaatctcataagtgtttatgttagtagataaactcaaatgaaccaatt 157  Q
    ||||||| | ||||||||||| ||  ||||||||||| |||||||||| ||||||| ||||||||    
T  34429703 tcataagcttttccaaacaatatctcaagtgtttatgctagtagataagctcaaataaaccaatt 34429639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 415296 - 415367
Alignment:
Q  3 gtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 74  Q
    ||||||| ||||||||||||| ||||||| |  |||||| |||||| ||| ||||||||||||  |||||||    
T  415296 gtataagctataagttgtttttataagctatagtggagaacttatggaataaagctgaaaacagattatgaa 415367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 34 - 129
Target Start/End: Original strand, 30863269 - 30863363
Alignment:
Q  34 cttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaacaatctcataagtgtttatg 129  Q
    |||| |||||||||  || |||||||||||||||||||| | || ||| || |||||||||||||| ||| ||||| | ||| | |||||||||||    
T  30863269 cttgaagagcttatagaagtaagctgaaaacaacttatgtacatgtca-taagttgttttcataagctctaccaaagagtctaacaagtgtttatg 30863363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 835311 - 835265
Alignment:
Q  19 gttttgataagctgtcttggagagcttatgaaattaagctgaaaaca 65  Q
    ||||| ||||||| ||||||||| ||||||||| |||||||||||||    
T  835311 gttttcataagctatcttggagaacttatgaaaataagctgaaaaca 835265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 146
Target Start/End: Complemental strand, 7945929 - 7945820
Alignment:
Q  36 tggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaacaatctcataagtgtttatgttagta 135  Q
    ||||||||||||| || |||||| ||||||||| || || ||  || || ||||||||||||| |||| |||||| || |||  |||| |||||| ||||    
T  7945929 tggagagcttatggaaataagcttaaaacaactaataaacatgcca-taagttgttttcataatttctcccaaaccatgtcacgagtgcttatgtcagta 7945831  T
Q  136 gataaactcaa 146  Q
    ||||| |||||    
T  7945830 gataagctcaa 7945820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 148
Target Start/End: Original strand, 31774455 - 31774513
Alignment:
Q  90 ttttcataagttcttccaaacaatctcataagtgtttatgttagtagataaactcaaat 148  Q
    ||||||| || ||||||||||| ||||||||||| |||||   ||||||||||||||||    
T  31774455 ttttcatgagctcttccaaacagtctcataagtgcttatgccggtagataaactcaaat 31774513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 32386640 - 32386578
Alignment:
Q  4 tataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaa 66  Q
    |||||| |||| |||||||| || || | || |||||||||||||||| ||||||||||||||    
T  32386640 tataaggtatacgttgttttcattagttatcctggagagcttatgaaaataagctgaaaacaa 32386578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 134
Target Start/End: Original strand, 34403856 - 34403977
Alignment:
Q  12 ataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaaca 111  Q
    ||||| |||||| |||||||||  |  |||||||||| || |||| |||||||| |||||||| || ||| || ||||||||| ||| |||| | |||||    
T  34403856 ataagatgttttcataagctgtactaaagagcttatggaaataaggtgaaaacaccttatgaacatgtca-taagttgttttcttaacttctcctaaaca 34403954  T
Q  112 atctcataagtgtttatgttagt 134  Q
     ||| | ||||||||||| ||||    
T  34403955 gtctaacaagtgtttatgctagt 34403977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 837291 - 837234
Alignment:
Q  6 taagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaa 63  Q
    |||| ||||||| ||||| || |||| ||||||||| ||||||||| |||||||||||    
T  837291 taagctataagtagttttcattagctatcttggagaacttatgaaaataagctgaaaa 837234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 1497978 - 1498035
Alignment:
Q  8 agttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaaca 65  Q
    |||||||||  ||||| |||| || ||||||||||||||||||| |||| ||||||||    
T  1497978 agttataagaagttttcataaactatcttggagagcttatgaaaataaggtgaaaaca 1498035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 148
Target Start/End: Complemental strand, 7351646 - 7351605
Alignment:
Q  107 aaacaatctcataagtgtttatgttagtagataaactcaaat 148  Q
    ||||||||||| ||||| |||||| |||||||||||||||||    
T  7351646 aaacaatctcacaagtgcttatgtcagtagataaactcaaat 7351605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 72
Target Start/End: Original strand, 9027606 - 9027639
Alignment:
Q  39 agagcttatgaaattaagctgaaaacaacttatg 72  Q
    ||||||||||||| ||||||||||||||||||||    
T  9027606 agagcttatgaaaataagctgaaaacaacttatg 9027639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 26694870 - 26694931
Alignment:
Q  3 gtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaac 64  Q
    ||||| ||||||| ||||||| |||| || ||||| ||| ||||||||| ||||||||||||    
T  26694870 gtatatgttataaattgttttcataaactatcttgaagaacttatgaaaataagctgaaaac 26694931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 27909700 - 27909647
Alignment:
Q  19 gttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatg 72  Q
    ||||| ||||||| |  ||||||||||||| || ||||||||||||||||||||    
T  27909700 gtttttataagctttactggagagcttatggaaataagctgaaaacaacttatg 27909647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 32386176 - 32386115
Alignment:
Q  11 tataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatg 72  Q
    |||||| |||||| || || | || |||| ||||||||||| ||||||||||||||||||||    
T  32386176 tataagctgttttcattagttatcctggaaagcttatgaaagtaagctgaaaacaacttatg 32386115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 1401101 - 1401169
Alignment:
Q  3 gtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttat 71  Q
    ||||||| |||||| |||||| ||||||| || ||||||||||||| |  |||||||| ||||| ||||    
T  1401101 gtataagctataagctgttttcataagctatcatggagagcttatggagataagctgagaacaagttat 1401169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 2205654 - 2205610
Alignment:
Q  17 ttgttttgataagctgtcttggagagcttatgaaattaagctgaa 61  Q
    ||||||| ||||||| |||||||||||||||| || |||||||||    
T  2205654 ttgttttcataagctatcttggagagcttatggaaataagctgaa 2205610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 103
Target Start/End: Original strand, 2455259 - 2455351
Alignment:
Q  11 tataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttct 103  Q
    |||||| |||||| ||| ||  |||||||||  || ||||| ||||||||||||||||||| || | |  | || ||||||||||||||||||    
T  2455259 tataagctgttttcatatgcaatcttggagaagttgtgaaaataagctgaaaacaacttataaacaatgtaataagttgttttcataagttct 2455351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 165
Target Start/End: Complemental strand, 4325274 - 4325222
Alignment:
Q  113 tctcataagtgtttatgttagtagataaactcaaatgaaccaattcaaacagg 165  Q
    ||||| ||||||||||||||||||||||||| |||| |  |||| ||||||||    
T  4325274 tctcacaagtgtttatgttagtagataaactaaaattagtcaatccaaacagg 4325222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 6909952 - 6909892
Alignment:
Q  1 ttgtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaa 61  Q
    ||||||| | ||||||||||||| ||||  | |||||||||  ||||||||||||||||||    
T  6909952 ttgtatatgctataagttgttttcataacatatcttggagaatttatgaaattaagctgaa 6909892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 71
Target Start/End: Complemental strand, 7785790 - 7785754
Alignment:
Q  35 ttggagagcttatgaaattaagctgaaaacaacttat 71  Q
    |||||||||||||| || |||||||||||||||||||    
T  7785790 ttggagagcttatggaaataagctgaaaacaacttat 7785754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 2e-18; HSPs: 76)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 90 - 165
Target Start/End: Original strand, 41170688 - 41170763
Alignment:
Q  90 ttttcataagttcttccaaacaatctcataagtgtttatgttagtagataaactcaaatgaaccaattcaaacagg 165  Q
    |||||||||||| ||||||| | ||||| |||||||||||||||||||||||||||||| | ||||| ||||||||    
T  41170688 ttttcataagttattccaaatagtctcacaagtgtttatgttagtagataaactcaaataagccaatccaaacagg 41170763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 18 - 148
Target Start/End: Original strand, 8017441 - 8017570
Alignment:
Q  18 tgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaacaatctca 117  Q
    |||||| ||||||| ||||||||| ||||||||| || || |||||||| ||||||| || ||| || | |||||||||||||||| ||||| |||| ||    
T  8017441 tgttttcataagctatcttggagaacttatgaaaatacgcagaaaacaaattatgaacatatca-taagctgttttcataagttctcccaaataatcgca 8017539  T
Q  118 taagtgtttatgttagtagataaactcaaat 148  Q
     ||||| |||||| | ||||||| |||||||    
T  8017540 caagtgcttatgtcaatagataacctcaaat 8017570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 3 - 161
Target Start/End: Original strand, 40158710 - 40158867
Alignment:
Q  3 gtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttc 102  Q
    |||||||  |||||||||||| ||||| | |  ||||||||||||| |||||||||||||||||||||| || || ||| || | |||||||||||||||    
T  40158710 gtataagcaataagttgttttcataagttattctggagagcttatgtaattaagctgaaaacaacttataaacatgtca-taagctgttttcataagttc 40158808  T
Q  103 ttccaaacaatctcataagtgtttatgttagtagataaactcaaatgaaccaattcaaa 161  Q
      |||| || ||||| ||||  |||||| ||||||||  ||||||| | ||||| ||||    
T  40158809 ccccaatcagtctcacaagttcttatgtcagtagatatgctcaaataagccaatccaaa 40158867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 25 - 134
Target Start/End: Complemental strand, 12313229 - 12313121
Alignment:
Q  25 ataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaacaatctcataagtgt 124  Q
    ||||||| ||||||||||||||||||| |||| ||||| ||||||||||| ||  || || | ||||||||||| |||| ||||||||||||| |||||     
T  12313229 ataagctatcttggagagcttatgaaaataaggtgaaatcaacttatgaacatggca-taagctgttttcataaattctcccaaacaatctcacaagtgc 12313131  T
Q  125 ttatgttagt 134  Q
    ||||| ||||    
T  12313130 ttatgctagt 12313121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 157
Target Start/End: Original strand, 33192216 - 33192346
Alignment:
Q  25 ataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaacaatctcataagtgt 124  Q
    ||||||| || |||||||||||| ||  ||||||||||||| |||||| |||| ||| ||   ||||||||||||||||| |||||| |||||| |||||    
T  33192216 ataagctatcctggagagcttataaatataagctgaaaacagcttatggatatgtca-taaactgttttcataagttctt-caaacagtctcatgagtgt 33192313  T
Q  125 ttatgttagtagataaactcaaatgaaccaatt 157  Q
    |||||| || |||||| ||||||| | ||||||    
T  33192314 ttatgtcagcagataagctcaaataagccaatt 33192346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 35379079 - 35379023
Alignment:
Q  18 tgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 74  Q
    |||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  35379079 tgttttcataagctatcttggagagcttatgaaaataagctgaaaacaacttatgaa 35379023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 1625892 - 1625963
Alignment:
Q  3 gtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 74  Q
    ||||||||||||||||||||| ||||||| ||||||||| |||| |||| | ||||||||||| ||||||||    
T  1625892 gtataagttataagttgttttcataagctatcttggagaacttacgaaaatcagctgaaaacatcttatgaa 1625963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 33941899 - 33942058
Alignment:
Q  1 ttgtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagt 100  Q
    ||||||||||||||| ||||||| ||||||| |||||||||| |||||| | |||| ||||| || ||||||||  | ||| || |||||||||||||||    
T  33941899 ttgtataagttataacttgttttcataagctatcttggagagtttatgataataagttgaaagcagcttatgaacttgtca-taagttgttttcataagt 33941997  T
Q  101 tcttccaaacaatctcataagtgtttatgttagtagataaactcaaatgaaccaattcaaacag 164  Q
    | |   |||||| ||||  |||  |||||  ||||||||| ||||||| | ||||| |||||||    
T  33941998 tat---aaacaaactcactagtacttatgccagtagataacctcaaataagccaatccaaacag 33942058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 25 - 126
Target Start/End: Complemental strand, 43199840 - 43199740
Alignment:
Q  25 ataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaacaatctcataagtgt 124  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||| || || |||  | ||||| ||| ||| |||| ||||||| ||||| ||||||    
T  43199840 ataagctatcttggagggcttatgaaattaagctgaaaacaacttataaacatgtca-caagttgtattcgtaacttctcccaaacagtctcacaagtgt 43199742  T
Q  125 tt 126  Q
    ||    
T  43199741 tt 43199740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 43985081 - 43985021
Alignment:
Q  3 gtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaa 63  Q
    |||||| |||||||||||||| ||||||| ||||| ||||||||||||| |||||||||||    
T  43985081 gtataaattataagttgttttcataagctatcttgaagagcttatgaaaataagctgaaaa 43985021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 11 - 77
Target Start/End: Original strand, 16867739 - 16867805
Alignment:
Q  11 tataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatat 77  Q
    |||||| |||||| | ||||| |||||||||||||||| || |||| ||||||||||||||||||||    
T  16867739 tataaggtgttttcacaagctatcttggagagcttatggaaataagttgaaaacaacttatgaatat 16867805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 88 - 146
Target Start/End: Complemental strand, 40776091 - 40776033
Alignment:
Q  88 tgttttcataagttcttccaaacaatctcataagtgtttatgttagtagataaactcaa 146  Q
    ||||||||||||||||||||||||   | ||||||| ||||||||||||||||||||||    
T  40776091 tgttttcataagttcttccaaacaggtttataagtgcttatgttagtagataaactcaa 40776033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 44443330 - 44443391
Alignment:
Q  20 ttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttca 81  Q
    |||| ||||||| |||| |||||| ||||||| |||||||||||||||||||||| ||||||    
T  44443330 ttttcataagctatctttgagagcatatgaaaataagctgaaaacaacttatgaacatttca 44443391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 33 - 129
Target Start/End: Complemental strand, 5902597 - 5902502
Alignment:
Q  33 tcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaacaatctcataagtgtttatg 129  Q
    ||||||||| | ||| |||  ||||||||||||  ||||||| || ||| || | |||||||||||||||||||||||| ||||| |||||||||||    
T  5902597 tcttggagaacatataaaaacaagctgaaaacagtttatgaacatgtca-taagctgttttcataagttcttccaaacagtctcacaagtgtttatg 5902502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 4 - 148
Target Start/End: Original strand, 14666541 - 14666684
Alignment:
Q  4 tataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttct 103  Q
    |||||||||||||||||||| | ||||| ||||||   |||||||||| |||| |||||||||| |||||| || ||| || ||||||| ||||  ||||    
T  14666541 tataagttataagttgttttcacaagctatcttggtatgcttatgaaaataaggtgaaaacaacctatgaacatgtca-taagttgtttccatatattct 14666639  T
Q  104 tccaaacaatctcataagtgtttatgttagtagataaactcaaat 148  Q
    ||  ||   ||||| |||||||||||  |||| |||| |||||||    
T  14666640 tctgaaacgtctcacaagtgtttatggaagtaaataagctcaaat 14666684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 35 - 111
Target Start/End: Complemental strand, 28677705 - 28677630
Alignment:
Q  35 ttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaaca 111  Q
    |||||||||||||| || ||||| |||||||||||||||| || ||| || | |||||||||||||||| |||||||    
T  28677705 ttggagagcttatggaaataagccgaaaacaacttatgaaaatgtca-taagctgttttcataagttctcccaaaca 28677630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 36863702 - 36863650
Alignment:
Q  4 tataagttataagttgttttgataagctgtcttggagagcttatgaaattaag 56  Q
    |||||||||||| ||||||| ||||||| ||||||||||||||||||| ||||    
T  36863702 tataagttataaattgttttcataagctatcttggagagcttatgaaaataag 36863650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 93 - 165
Target Start/End: Original strand, 44064517 - 44064589
Alignment:
Q  93 tcataagttcttccaaacaatctcataagtgtttatgttagtagataaactcaaatgaaccaattcaaacagg 165  Q
    ||||||||||||||||||| ||||| ||||    ||||||| |||||||||||||||| |||| |||||||||    
T  44064517 tcataagttcttccaaacagtctcacaagttccaatgttagcagataaactcaaatgatccaaatcaaacagg 44064589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 43 - 111
Target Start/End: Complemental strand, 44606148 - 44606081
Alignment:
Q  43 cttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaaca 111  Q
    ||||||||| | |||||||||||||||||| | || ||| || ||||||||||||||||||||||||||    
T  44606148 cttatgaaaatcagctgaaaacaacttatggacatgtca-taagttgttttcataagttcttccaaaca 44606081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 163
Target Start/End: Original strand, 4350766 - 4350841
Alignment:
Q  88 tgttttcataagttcttccaaacaatctcataagtgtttatgttagtagataaactcaaatgaaccaattcaaaca 163  Q
    ||||||||||||||||  ||||||||||| |||||| |||||| |||||| || ||||||| | ||||| ||||||    
T  4350766 tgttttcataagttctctcaaacaatctcttaagtgcttatgtcagtagagaagctcaaataagccaatccaaaca 4350841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 9477944 - 9478003
Alignment:
Q  3 gtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaa 62  Q
    ||||||||||||||||||||| ||||||| || ||||||| |||||||| |||| |||||    
T  9477944 gtataagttataagttgttttcataagctatcctggagaggttatgaaaataagttgaaa 9478003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 38078480 - 38078417
Alignment:
Q  11 tataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 74  Q
    |||| |||||||| ||||||| |||||||||||||||| || | |||| |||||||||||||||    
T  38078480 tataggttgttttcataagctatcttggagagcttatgtaaatgagctcaaaacaacttatgaa 38078417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 43911077 - 43911006
Alignment:
Q  3 gtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 74  Q
    |||||||  |||||||||||| | ||||| ||||||| ||||| ||| | ||||||||||||||||||||||    
T  43911077 gtataagccataagttgttttcaaaagctatcttggaaagcttgtgataataagctgaaaacaacttatgaa 43911006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 1810655 - 1810716
Alignment:
Q  1 ttgtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaa 63  Q
    |||||||||||||| |||||||| ||||||| ||||| |||| |||||||| |||||||||||    
T  1810655 ttgtataagttata-gttgtttttataagctatcttgaagagtttatgaaaataagctgaaaa 1810716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 8187516 - 8187407
Alignment:
Q  18 tgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaacaatctca 117  Q
    |||||| |||||||  | ||||||| ||||| || ||| |||||||||||||  ||| |||||| || ||||| ||||||||||||| |||||| |||||    
T  8187516 tgttttcataagctaccatggagagattatggaaataacctgaaaacaacttgcgaaaatttca-taagttgtattcataagttctttcaaacagtctca 8187418  T
Q  118 taagtgtttat 128  Q
     ||||| ||||    
T  8187417 caagtggttat 8187407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 90 - 148
Target Start/End: Original strand, 29430836 - 29430894
Alignment:
Q  90 ttttcataagttcttccaaacaatctcataagtgtttatgttagtagataaactcaaat 148  Q
    |||||||||||||||||||| | || || |||||||||||| ||||||||| |||||||    
T  29430836 ttttcataagttcttccaaatagtcccacaagtgtttatgtcagtagataagctcaaat 29430894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 2142643 - 2142763
Alignment:
Q  1 ttgtataagttataagttgttttgataagctgtcttgg-agagcttatgaaattaagctgaaaacaacttatgaatatt-tcagtacgttgttttcataa 98  Q
    ||||||||| ||||||||||||| ||||  | |||||| |||  |||||||| |||||| |||||| || ||||| ||| |||  || ||||||||||||    
T  2142643 ttgtataagctataagttgttttcataatttatcttgggagaatttatgaaaataagctaaaaacagctaatgaacattgtcacaac-ttgttttcataa 2142741  T
Q  99 gttcttccaaacaatctcataa 120  Q
    ||||| ||||||| ||||||||    
T  2142742 gttctcccaaacagtctcataa 2142763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 74
Target Start/End: Complemental strand, 7928347 - 7928306
Alignment:
Q  33 tcttggagagcttatgaaattaagctgaaaacaacttatgaa 74  Q
    ||||||||| ||||||||| ||||||||||||||||||||||    
T  7928347 tcttggagaacttatgaaaataagctgaaaacaacttatgaa 7928306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 29628823 - 29628750
Alignment:
Q  1 ttgtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 74  Q
    ||||||||| ||||||||||| | ||||||| ||||||| |  ||||| || |||||||||||||| |||||||    
T  29628823 ttgtataagctataagttgttctcataagctatcttggaaaatttatggaaataagctgaaaacaatttatgaa 29628750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 41851525 - 41851598
Alignment:
Q  1 ttgtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 74  Q
    ||||||| | ||||||||||||| | ||||| |||||||||  ||||||||||||||||| || | ||||||||    
T  41851525 ttgtatatgctataagttgttttcagaagctatcttggagaatttatgaaattaagctgagaaaagcttatgaa 41851598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 44590028 - 44590089
Alignment:
Q  5 ataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaa 66  Q
    ||||||||||||||||||| ||||||| ||||| ||| ||| ||| | ||||||||||||||    
T  44590028 ataagttataagttgttttcataagctatcttgaagaacttgtgagaataagctgaaaacaa 44590089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 656855 - 656787
Alignment:
Q  3 gtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttat 71  Q
    ||||||| | ||||||| ||| ||||||| ||||| ||||||||||||| |||| ||||||| ||||||    
T  656855 gtataagctgtaagttgatttcataagctatcttgcagagcttatgaaaataagatgaaaactacttat 656787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 148
Target Start/End: Complemental strand, 14299708 - 14299565
Alignment:
Q  4 tataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttct 103  Q
    |||||||||| ||||||||| | | ||| |||| || |||||||  || ||||||||||||||  |||| |||| ||| || ||||||| |||||  |||    
T  14299708 tataagttatgagttgttttcacaggctatctttgacagcttatagaaataagctgaaaacaatgtatggatatgtca-taagttgtttccataaactct 14299610  T
Q  104 tccaaacaatctcataagtgtttatgttagtagataaactcaaat 148  Q
    |||||||| || |  ||||| ||| ||| |||| |||||||||||    
T  14299609 tccaaacagtccctcaagtgcttacgttggtagctaaactcaaat 14299565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 15977991 - 15978047
Alignment:
Q  17 ttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatga 73  Q
    ||||||| ||||||| | |||||||| |||||||| |||||||||||||| ||||||    
T  15977991 ttgttttcataagctattttggagagattatgaaaataagctgaaaacaatttatga 15978047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 18840796 - 18840856
Alignment:
Q  11 tataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttat 71  Q
    |||||| || ||| ||||| |||||||||||||||||| || |||| ||||||||||||||    
T  18840796 tataagctggttttataagatgtcttggagagcttatggaaataagatgaaaacaacttat 18840856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 29510592 - 29510644
Alignment:
Q  11 tataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaa 63  Q
    |||||||||||||  |||||| |||| |||||||||||||||||||| |||||    
T  29510592 tataagttgttttcctaagctatctttgagagcttatgaaattaagccgaaaa 29510644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 140
Target Start/End: Original strand, 35485910 - 35486045
Alignment:
Q  4 tataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttct 103  Q
    |||||| ||||||||||||| ||||||| || || ||||| |||| || | ||||||||||| |||||||| || ||| || |||| |||  ||||||||    
T  35485910 tataagctataagttgtttttataagctatcctgaagagcctatggaaatgagctgaaaacagcttatgaacatatca-taagttgctttagtaagttct 35486008  T
Q  104 tccaaacaatctcataagtgtttatgttagtagataa 140  Q
      |||||| ||||| ||||  ||||||  ||||||||    
T  35486009 ctcaaacagtctcacaagttcttatgtcggtagataa 35486045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 36043926 - 36043994
Alignment:
Q  33 tcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagtt 101  Q
    ||||||||||||||||||||| |||| |||||| |||||||| | |   ||| ||||||||||||||||    
T  36043926 tcttggagagcttatgaaattgagctaaaaacagcttatgaacaatgtcgtaagttgttttcataagtt 36043994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 40279189 - 40279249
Alignment:
Q  3 gtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaa 63  Q
    ||||||| ||||||||||||| ||||||| | ||||||| ||||||||| | |||||||||    
T  40279189 gtataagatataagttgttttcataagctatgttggagaacttatgaaaattagctgaaaa 40279249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 9174815 - 9174878
Alignment:
Q  11 tataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 74  Q
    |||||| |||||| ||||||| ||||  ||||||||||||| ||||||||||| | ||||||||    
T  9174815 tataagctgttttcataagctatcttacagagcttatgaaaataagctgaaaatagcttatgaa 9174878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 88 - 163
Target Start/End: Original strand, 11513972 - 11514047
Alignment:
Q  88 tgttttcataagttcttccaaacaatctcataagtgtttatgttagtagataaactcaaatgaaccaattcaaaca 163  Q
    |||||||||||| |||   ||||| ||||| ||||| ||||| |||||||||| ||||||| ||||||| ||||||    
T  11513972 tgttttcataagctctctaaaacagtctcacaagtgcttatgctagtagataatctcaaataaaccaatccaaaca 11514047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 140
Target Start/End: Original strand, 15120189 - 15120311
Alignment:
Q  17 ttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaacaatctc 116  Q
    |||||||  |||||| || |||||||||||| ||| |||||| |||||| || ||||| || ||| || ||||||| |||||| ||| |||||||   ||    
T  15120189 ttgttttcgtaagctatcatggagagcttatcaaaataagcttaaaacagctaatgaacatgtca-taagttgtttccataagctctcccaaacagattc 15120287  T
Q  117 ataagtgtttatgttagtagataa 140  Q
    | || |||||||| ||||||||||    
T  15120288 acaactgtttatgctagtagataa 15120311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 41 - 140
Target Start/End: Complemental strand, 16551880 - 16551782
Alignment:
Q  41 agcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaacaatctcataagtgtttatgttagtagataa 140  Q
    |||||||| || ||||||||| |||||||||| |||| ||| || | | ||| |||||| ||||| ||||||||||  |||||||||||| | |||||||    
T  16551880 agcttatggaaataagctgaatacaacttatgtatatgtca-taagatctttccataagctcttctaaacaatctcgcaagtgtttatgtcaatagataa 16551782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 29316845 - 29316782
Alignment:
Q  11 tataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 74  Q
    |||||| |||||| || |||| ||||||||| |||||| || ||||||||||| ||||||||||    
T  29316845 tataagctgttttcatcagctatcttggagaacttatggaaataagctgaaaagaacttatgaa 29316782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 39983335 - 39983394
Alignment:
Q  4 tataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaa 63  Q
    |||||| ||||||||||||| ||||||| || ||||||||| |||||| ||| |||||||    
T  39983335 tataagctataagttgttttcataagctatcctggagagctaatgaaaataaactgaaaa 39983394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 12 - 99
Target Start/End: Original strand, 40279268 - 40279355
Alignment:
Q  12 ataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataag 99  Q
    |||||||||||| ||||||| | ||||||| ||||||||| | |||||||||||  ||||||| | | |  || ||||||||||||||    
T  40279268 ataagttgttttcataagctatattggagaacttatgaaaattagctgaaaacagtttatgaacaatgccataagttgttttcataag 40279355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 12 - 99
Target Start/End: Original strand, 40279338 - 40279425
Alignment:
Q  12 ataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataag 99  Q
    |||||||||||| ||||||| | ||||||| ||||||||| | |||||||||||  ||||||| | | |  || ||||||||||||||    
T  40279338 ataagttgttttcataagctatattggagaacttatgaaaattagctgaaaacagtttatgaacaatgccataagttgttttcataag 40279425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 3078709 - 3078651
Alignment:
Q  12 ataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaactta 70  Q
    ||||| |||||| ||||||| ||||||||||||| || || |||||| |||||||||||    
T  3078709 ataagctgtttttataagctatcttggagagcttctggaaataagctaaaaacaactta 3078651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 73
Target Start/End: Complemental strand, 6772590 - 6772528
Alignment:
Q  11 tataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatga 73  Q
    |||||||| |||| ||||| | ||| ||||||||||||||| ||||||||||| | |||||||    
T  6772590 tataagttattttcataaggtatctaggagagcttatgaaagtaagctgaaaaaagcttatga 6772528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 72
Target Start/End: Complemental strand, 10563633 - 10563567
Alignment:
Q  6 taagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatg 72  Q
    |||||||||||||||||| ||||||| |  || |||||||| |||| ||||||||||| | ||||||    
T  10563633 taagttataagttgttttcataagctatgctgaagagcttaagaaaataagctgaaaatagcttatg 10563567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 73
Target Start/End: Original strand, 11488277 - 11488339
Alignment:
Q  11 tataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatga 73  Q
    |||||| || ||| ||||||| || ||||||| ||||| || |||||||||||||||||||||    
T  11488277 tataagctgctttcataagctatcctggagagattatgcaaataagctgaaaacaacttatga 11488339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 140
Target Start/End: Original strand, 12140606 - 12140660
Alignment:
Q  86 gttgttttcataagttcttccaaacaatctcataagtgtttatgttagtagataa 140  Q
    ||||||||||||||||||  ||||| || || ||||||||||||| |||||||||    
T  12140606 gttgttttcataagttctctcaaactatttcgtaagtgtttatgtcagtagataa 12140660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 148
Target Start/End: Original strand, 13866952 - 13867014
Alignment:
Q  86 gttgttttcataagttcttccaaacaatctcataagtgtttatgttagtagataaactcaaat 148  Q
    ||||||||| ||||||||  |||||| ||||| |||||||||||  ||||||||| |||||||    
T  13866952 gttgttttcttaagttctctcaaacagtctcacaagtgtttatggcagtagataagctcaaat 13867014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 14364259 - 14364197
Alignment:
Q  1 ttgtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaa 63  Q
    |||||||||||||||||||||||||  ||||  |||| ||| ||||||||| |||| ||||||    
T  14364259 ttgtataagttataagttgttttgaggagctaccttgaagaacttatgaaaataagttgaaaa 14364197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 140
Target Start/End: Original strand, 40145526 - 40145580
Alignment:
Q  86 gttgttttcataagttcttccaaacaatctcataagtgtttatgttagtagataa 140  Q
    |||||||  |||||||||  ||||||| ||||||||||||||||| |||||||||    
T  40145526 gttgtttcgataagttctctcaaacaagctcataagtgtttatgtcagtagataa 40145580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 129
Target Start/End: Complemental strand, 41809299 - 41809198
Alignment:
Q  27 aagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaacaatctcataagtgttt 126  Q
    ||||| |||| || |||||||| || |||||| ||||||||||||||| || ||| || ||||||| || ||| |||| ||| || ||||| ||||||||    
T  41809299 aagctatcttagaaagcttatggaaataagctaaaaacaacttatgaacatgtca-taagttgtttccacaagctcttacaatcagtctcacaagtgttt 41809201  T
Q  127 atg 129  Q
    |||    
T  41809200 atg 41809198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 95
Target Start/End: Complemental strand, 1056196 - 1056116
Alignment:
Q  14 aagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttca 95  Q
    |||||||||| | ||||| || || |||||||||||||  ||||||||||||||| ||||| || ||| || ||||||||||    
T  1056196 aagttgttttcacaagctctcatgtagagcttatgaaaacaagctgaaaacaactaatgaacatgtca-taagttgttttca 1056116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 76
Target Start/End: Complemental strand, 1493551 - 1493518
Alignment:
Q  43 cttatgaaattaagctgaaaacaacttatgaata 76  Q
    ||||||||| ||||||||||||||||||||||||    
T  1493551 cttatgaaaataagctgaaaacaacttatgaata 1493518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 73
Target Start/End: Original strand, 7871644 - 7871705
Alignment:
Q  12 ataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatga 73  Q
    ||||| |||||| ||||||| | ||| |||||||||| || ||||||||||||| |||||||    
T  7871644 ataagctgttttcataagctcttttgaagagcttatggaaataagctgaaaacaccttatga 7871705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 12289795 - 12289864
Alignment:
Q  9 gttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatt 78  Q
    ||||||||||||||| ||||  | | ||||||| ||||||||| |||| |||||| | ||||||||||||    
T  12289795 gttataagttgtttttataatttatattggagaacttatgaaaataagttgaaaaaagcttatgaatatt 12289864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 84
Target Start/End: Complemental strand, 19333371 - 19333322
Alignment:
Q  35 ttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagta 84  Q
    ||||||||||||||||| |||||||| |||| |||||||| || ||||||    
T  19333371 ttggagagcttatgaaaataagctgagaacagcttatgaacatgtcagta 19333322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 74
Target Start/End: Complemental strand, 35378580 - 35378539
Alignment:
Q  33 tcttggagagcttatgaaattaagctgaaaacaacttatgaa 74  Q
    ||||||| ||||||||||| ||||||||||| ||||||||||    
T  35378580 tcttggatagcttatgaaaataagctgaaaataacttatgaa 35378539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 77
Target Start/End: Complemental strand, 39236564 - 39236499
Alignment:
Q  12 ataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatat 77  Q
    |||||||||||| |||| || ||||  | ||||||| ||| |||||| ||||||||||||||||||    
T  39236564 ataagttgttttaataaactatcttaaaaagcttataaaaataagctaaaaacaacttatgaatat 39236499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 40279408 - 40279461
Alignment:
Q  12 ataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaaca 65  Q
    |||||||||||| ||||||| | ||||||| ||||||||| |||| ||||||||    
T  40279408 ataagttgttttcataagctatattggagaacttatgaaaataagttgaaaaca 40279461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 165
Target Start/End: Complemental strand, 40400894 - 40400817
Alignment:
Q  88 tgttttcataagttcttccaaacaatctcataagtgtttatgttagtagataaactcaaatgaaccaattcaaacagg 165  Q
    |||||||||||||| || |||||||| ||| |||| ||||||| ||||||||  || |||| | ||||| ||||||||    
T  40400894 tgttttcataagttttttcaaacaatgtcacaagtctttatgtcagtagataggcttaaataagccaatccaaacagg 40400817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 99
Target Start/End: Complemental strand, 43065517 - 43065433
Alignment:
Q  14 aagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataag 99  Q
    |||||||||| ||||| | || ||||||||||||  || |||||||||||||| ||||| | || ||| || ||||||||||||||    
T  43065517 aagttgttttcataagttatcgtggagagcttattgaaataagctgaaaacaatttatggacatgtca-taagttgttttcataag 43065433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 161
Target Start/End: Complemental strand, 43530105 - 43530032
Alignment:
Q  88 tgttttcataagttcttccaaacaatctcataagtgtttatgttagtagataaactcaaatgaaccaattcaaa 161  Q
    |||||||||||||||| |||| || ||||| |||||  ||||||||||||| | ||||||| | |||| |||||    
T  43530105 tgttttcataagttctcccaagcactctcacaagtgcatatgttagtagattagctcaaataagccaaatcaaa 43530032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 3227747 - 3227691
Alignment:
Q  17 ttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatga 73  Q
    ||||||| ||||||| | |||||||| || ||||| |||||||||||||| ||||||    
T  3227747 ttgttttcataagctattttggagagattttgaaaataagctgaaaacaatttatga 3227691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 6227751 - 6227811
Alignment:
Q  11 tataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttat 71  Q
    ||||||| ||||| ||||||| | ||||||||||||||  |  ||||||||||||||||||    
T  6227751 tataagtggttttcataagctattttggagagcttatggtaacaagctgaaaacaacttat 6227811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 7751521 - 7751485
Alignment:
Q  1 ttgtataagttataagttgttttgataagctgtcttg 37  Q
    ||||||||||||||||||||||| ||||||| |||||    
T  7751521 ttgtataagttataagttgtttttataagctatcttg 7751485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 9530789 - 9530737
Alignment:
Q  20 ttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatg 72  Q
    |||| ||||||| || |||||||||||||||| |||||| |||| ||||||||    
T  9530789 ttttcataagctatcctggagagcttatgaaagtaagctaaaaataacttatg 9530737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 24097813 - 24097861
Alignment:
Q  16 gttgttttgataagctgtcttggagagcttatgaaattaagctgaaaac 64  Q
    |||||||| ||||| | || |||||||||||||||| ||||||||||||    
T  24097813 gttgttttcataagttatcctggagagcttatgaaaataagctgaaaac 24097861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 32592576 - 32592684
Alignment:
Q  1 ttgtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagt 100  Q
    ||||||| | ||||||||||||| ||||||  | ||||||| ||||||||| |||| ||| || | |||||||| |||   ||| | | |||||||||||    
T  32592576 ttgtatacgctataagttgtttttataagcaatattggagaacttatgaaaataagttgagaaaagcttatgaaaattgtcgtaagctattttcataagt 32592675  T
Q  101 tcttccaaa 109  Q
    ||| |||||    
T  32592676 tctcccaaa 32592684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 74
Target Start/End: Original strand, 33942145 - 33942213
Alignment:
Q  6 taagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 74  Q
    |||| ||||||||||||| ||||||  || | ||||||| |||||| | ||||||||||| ||||||||    
T  33942145 taagctataagttgttttcataagccatcatagagagctaatgaaaattagctgaaaacagcttatgaa 33942213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 34652097 - 34652045
Alignment:
Q  20 ttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatg 72  Q
    |||| ||||||| |||||||||||||||| || |||| |||||||| ||||||    
T  34652097 ttttcataagctatcttggagagcttatggaaataagttgaaaacagcttatg 34652045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 34927045 - 34927097
Alignment:
Q  94 cataagttcttccaaacaatctcataagtgtttatgttagtagataaactcaa 146  Q
    |||||||||||||||||| ||| ||||||| |||||| |||| |||| |||||    
T  34927045 cataagttcttccaaacagtcttataagtgcttatgtcagtaaataagctcaa 34927097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 8e-18; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 9956891 - 9956821
Alignment:
Q  4 tataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 74  Q
    |||||||||||||||||||| |||| || ||||||||| ||||||||| |||||||||||| |||||||||    
T  9956891 tataagttataagttgttttcataatctatcttggagaacttatgaaaataagctgaaaactacttatgaa 9956821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 39 - 148
Target Start/End: Original strand, 6950350 - 6950458
Alignment:
Q  39 agagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaacaatctcataagtgtttatgttagtagat 138  Q
    |||||||||| || |||||||||||||||||||  | || ||| || ||||||| |||||| ||| ||||||||||||| || ||||||||  |||||||    
T  6950350 agagcttatggaaataagctgaaaacaacttatcgacatgtca-taggttgtttacataagctctcccaaacaatctcacaaatgtttatgccagtagat 6950448  T
Q  139 aaactcaaat 148  Q
    ||||||||||    
T  6950449 aaactcaaat 6950458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 86 - 163
Target Start/End: Complemental strand, 2488004 - 2487927
Alignment:
Q  86 gttgttttcataagttcttccaaacaatctcataagtgtttatgttagtagataaactcaaatgaaccaattcaaaca 163  Q
    |||||||||||||||||| ||||||| ||||| ||||| |||||| ||||||| ||||||||| | ||||| ||||||    
T  2488004 gttgttttcataagttctcccaaacagtctcacaagtgcttatgtcagtagatgaactcaaataagccaatccaaaca 2487927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 88 - 165
Target Start/End: Original strand, 16162836 - 16162913
Alignment:
Q  88 tgttttcataagttcttccaaacaatctcataagtgtttatgttagtagataaactcaaatgaaccaattcaaacagg 165  Q
    |||||||||||||| |  |||||| ||||| ||||||||||| |||||||||||||||||| | ||||| ||||||||    
T  16162836 tgttttcataagttttctcaaacagtctcacaagtgtttatgctagtagataaactcaaataagccaatccaaacagg 16162913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 27028822 - 27028894
Alignment:
Q  2 tgtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 74  Q
    |||||| | |||||| |||||| ||||||| ||||||||||||||||||| ||||||||||| | ||||||||    
T  27028822 tgtatatgctataagctgttttcataagctatcttggagagcttatgaaaataagctgaaaatagcttatgaa 27028894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 165
Target Start/End: Complemental strand, 7918848 - 7918699
Alignment:
Q  6 taagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttc 105  Q
    |||| ||||||||||||| ||||||| ||||| ||||||| || || |||||||||||||  |||| |         || |||||||||||||| ||| |    
T  7918848 taagctataagttgttttcataagctatcttgtagagcttgtggaaataagctgaaaacagattataa---------taagttgttttcataagctctcc 7918758  T
Q  106 caaacaatctcataagtgtttatgttagtagataaactcaaatgaaccaattcaaacagg 165  Q
    |||||| ||||| ||||||||||| ||||||||||  | |||| || |||||||||||||    
T  7918757 caaacagtctcacaagtgtttatgctagtagataagtttaaat-aatcaattcaaacagg 7918699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 34849093 - 34849240
Alignment:
Q  1 ttgtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagt 100  Q
    ||||||||| |||||| |||| | ||||||| ||||| ||| |||||| || | ||||||||||  |||||||| || |||  | ||||||||||| |||    
T  34849093 ttgtataagatataagctgttatcataagctttcttgtagaacttatggaaatcagctgaaaacggcttatgaacatgtcataaagttgttttcattagt 34849192  T
Q  101 tcttccaaacaatctcataagtgtttatgttagtagataaactcaaat 148  Q
    ||| ||||||| ||||| ||||  |||||  ||||| ||| |||||||    
T  34849193 tctcccaaacagtctcaaaagtacttatgccagtagctaagctcaaat 34849240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 11 - 129
Target Start/End: Original strand, 7714242 - 7714359
Alignment:
Q  11 tataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaac 110  Q
    ||||||||||||| || |||| |||||||||||| |||||| |||| |||||||| || ||  | |||||| || ||||||| || ||| | ||||||||    
T  7714242 tataagttgttttcatgagctatcttggagagctcatgaaaataagttgaaaacagctcatcgacatttca-taagttgtttccacaagcttttccaaac 7714340  T
Q  111 aatctcataagtgtttatg 129  Q
    | ||||| |||||||||||    
T  7714341 agtctcacaagtgtttatg 7714359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 42215143 - 42215089
Alignment:
Q  20 ttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 74  Q
    |||| ||||||| |||||||||||||||| || ||||||||||||||||||||||    
T  42215143 ttttcataagctatcttggagagcttatgtaaataagctgaaaacaacttatgaa 42215089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 128
Target Start/End: Original strand, 778389 - 778505
Alignment:
Q  11 tataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaac 110  Q
    |||||| |||||| ||||||  | ||||||||||||||||| |||| |||||||||||||  ||  | ||  || ||||||||||||||||||| |||||    
T  778389 tataagctgttttcataagcattgttggagagcttatgaaagtaagttgaaaacaacttacaaacgtgtc-ttatgttgttttcataagttcttgcaaac 778487  T
Q  111 aatctcataagtgtttat 128  Q
    | ||||| ||||| ||||    
T  778488 agtctcacaagtgcttat 778505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 20672757 - 20672813
Alignment:
Q  18 tgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 74  Q
    |||||| ||||||| || |||||||||||||||| ||||||||||||| ||||||||    
T  20672757 tgtttttataagctatcctggagagcttatgaaaataagctgaaaacagcttatgaa 20672813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 28769416 - 28769348
Alignment:
Q  4 tataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatg 72  Q
    |||||| |||||| |||||| ||||||| | |||||||| ||||| || ||||||||||||||||||||    
T  28769416 tataagctataagctgttttcataagctattttggagagtttatggaaataagctgaaaacaacttatg 28769348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 30918116 - 30918176
Alignment:
Q  14 aagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 74  Q
    ||||| |||| ||||| | |||||||||||||||| || ||||||||||||||||||||||    
T  30918116 aagttcttttcataagttttcttggagagcttatggaaataagctgaaaacaacttatgaa 30918176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 43718013 - 43717945
Alignment:
Q  5 ataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatga 73  Q
    |||||||||||| |||||  ||||||| ||||||||| ||||||||| |||||| |||||| |||||||    
T  43718013 ataagttataagctgtttgcataagctatcttggagaacttatgaaagtaagctaaaaacagcttatga 43717945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 93 - 148
Target Start/End: Original strand, 1664450 - 1664505
Alignment:
Q  93 tcataagttcttccaaacaatctcataagtgtttatgttagtagataaactcaaat 148  Q
    ||||||| ||| ||||||| ||||| ||||||||||| ||||||||||||||||||    
T  1664450 tcataagctctcccaaacagtctcacaagtgtttatgctagtagataaactcaaat 1664505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 8062319 - 8062390
Alignment:
Q  1 ttgtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatg 72  Q
    ||||||||| |||||| |||||| ||||||| |||| ||||| ||||| || ||||||||||||| ||||||    
T  8062319 ttgtataagctataagctgttttcataagctatcttagagagattatggaaataagctgaaaacatcttatg 8062390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 779124 - 779027
Alignment:
Q  18 tgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaacaatctc 116  Q
    |||||| |||| || ||||||||||  ||  ||| |||| ||||||||||||||||| || ||| || ||||||||| ||||||||| |||||||||||    
T  779124 tgttttcataaactatcttggagagtgtaccaaaataagatgaaaacaacttatgaacatgtca-taagttgttttcgtaagttctttcaaacaatctc 779027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 30389092 - 30389162
Alignment:
Q  4 tataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 74  Q
    |||||| |||| | |||||| ||||||| || | |||| ||||||||| ||||||||||||||||||||||    
T  30389092 tataagctatacgctgttttcataagctttcctagagaacttatgaaaataagctgaaaacaacttatgaa 30389162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 148
Target Start/End: Complemental strand, 44236886 - 44236757
Alignment:
Q  18 tgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaacaatctca 117  Q
    |||||| ||||||| | ||||||||||||||||| ||||||||||| |||||| ||  || || ||  | | ||||||||  |||| || |||| |||||    
T  44236886 tgttttcataagctatattggagagcttatgaaaataagctgaaaataacttaagagcatgtc-gtgagctattttcatagattctcccgaacagtctca 44236788  T
Q  118 taagtgtttatgttagtagataaactcaaat 148  Q
     ||||| |||||  |||||||||||||||||    
T  44236787 caagtgcttatgccagtagataaactcaaat 44236757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 71
Target Start/End: Original strand, 4762512 - 4762569
Alignment:
Q  14 aagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttat 71  Q
    |||||||||| ||||||| ||||| |||||||||| || |||||||||||||| ||||    
T  4762512 aagttgttttcataagctatcttgaagagcttatgtaaataagctgaaaacaatttat 4762569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 11569527 - 11569466
Alignment:
Q  11 tataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatg 72  Q
    |||||| |||||| ||||||| || ||||||| || ||||| ||||||||||||||||||||    
T  11569527 tataagctgttttcataagctatcatggagagattttgaaaataagctgaaaacaacttatg 11569466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 31862485 - 31862554
Alignment:
Q  3 gtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatg 72  Q
    ||||||| |||||| |||||| ||||| | || | |||||||||||||| ||||||||||||| ||||||    
T  31862485 gtataagctataagatgttttcataagttatcctagagagcttatgaaaataagctgaaaacagcttatg 31862554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 38421256 - 38421325
Alignment:
Q  3 gtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatg 72  Q
    ||||||||| ||||||||||| | ||||| ||||| ||| ||| || || ||||||||||||||||||||    
T  38421256 gtataagttgtaagttgttttcaaaagctatcttgaagatcttgtgtaagtaagctgaaaacaacttatg 38421325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 140
Target Start/End: Original strand, 43504751 - 43504879
Alignment:
Q  11 tataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaac 110  Q
    |||||| |||||| ||||||| ||||||||| |||||| || ||||||||||||| ||||| || |  || ||| ||||||||||| |||||| | ||||    
T  43504751 tataagatgtttttataagctatcttggagaacttatggaaataagctgaaaacagcttataaacaagtc-gtaagttgttttcatcagttctccgaaac 43504849  T
Q  111 aatctcataagtgtttatgttagtagataa 140  Q
    | || || ||||| ||| |  |||||||||    
T  43504850 agtcacacaagtgcttaagccagtagataa 43504879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 74
Target Start/End: Original strand, 1930034 - 1930098
Alignment:
Q  10 ttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 74  Q
    ||||||| |||||| ||||||| |||||| || ||| ||||| ||||||||||||| ||||||||    
T  1930034 ttataagctgttttcataagctatcttggtgaccttgtgaaaataagctgaaaacagcttatgaa 1930098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 11745722 - 11745662
Alignment:
Q  11 tataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttat 71  Q
    |||||| |||||| ||||||| || | | |||||||||||| |||||||||||||||||||    
T  11745722 tataagctgtttttataagctatcctagtgagcttatgaaactaagctgaaaacaacttat 11745662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 27754404 - 27754464
Alignment:
Q  11 tataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttat 71  Q
    ||||||| ||||| ||||||| | ||||||||||||||||| |||||||||  ||||||||    
T  27754404 tataagtggttttcataagctattttggagagcttatgaaaataagctgaacgcaacttat 27754464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 31705078 - 31705146
Alignment:
Q  4 tataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatg 72  Q
    |||||| |||||| |||||| |||||||||| | ||||| ||||| || ||||||||||||| ||||||    
T  31705078 tataagctataagctgttttcataagctgtccttgagagtttatggaaataagctgaaaacagcttatg 31705146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 31804531 - 31804467
Alignment:
Q  4 tataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaact 68  Q
    |||||||||||||  ||||| || |||| |||| ||||||||||||||  |||||||||||||||    
T  31804531 tataagttataagcagttttcatgagctatctttgagagcttatgaaaggaagctgaaaacaact 31804467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 38648341 - 38648413
Alignment:
Q  1 ttgtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatga 73  Q
    ||||||| ||||| ||||||||| ||||||| ||||| ||| |||||||||||| ||| |||| | |||||||    
T  38648341 ttgtatatgttatgagttgttttcataagctatcttgtagaacttatgaaattacgcttaaaaaagcttatga 38648413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 93 - 148
Target Start/End: Complemental strand, 1892213 - 1892158
Alignment:
Q  93 tcataagttcttccaaacaatctcataagtgtttatgttagtagataaactcaaat 148  Q
    ||||||| ||| ||||||||||||| |||||||||||   ||||||||||||||||    
T  1892213 tcataagctctgccaaacaatctcacaagtgtttatgacggtagataaactcaaat 1892158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 129
Target Start/End: Original strand, 12851182 - 12851295
Alignment:
Q  17 ttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaacaatc-- 114  Q
    ||||||| ||||||| || | |||||||||||||| ||||| ||||||| |||||||| || | | || | |||||||||||||| | ||||||| ||      
T  12851182 ttgttttcataagctttccttgagagcttatgaaaataagccgaaaacatcttatgaacatgtta-taagctgttttcataagttttcccaaacagtcta 12851280  T
Q  115 tcataagtgtttatg 129  Q
    ||| |||||||||||    
T  12851281 tcacaagtgtttatg 12851295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 33714306 - 33714243
Alignment:
Q  11 tataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 74  Q
    |||||| | |||| ||||||| ||| ||||||||||| ||| ||||||||||||| ||||||||    
T  33714306 tataagctattttcataagctatctgggagagcttataaaaataagctgaaaacagcttatgaa 33714243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 2595066 - 2595004
Alignment:
Q  12 ataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 74  Q
    |||||||||||| ||||||||  || || | ||||||| | ||||||||||||||||||||||    
T  2595066 ataagttgttttcataagctgcattagacaacttatgagaataagctgaaaacaacttatgaa 2595004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 148
Target Start/End: Original strand, 4560584 - 4560638
Alignment:
Q  94 cataagttcttccaaacaatctcataagtgtttatgttagtagataaactcaaat 148  Q
    ||||||||||||||||||| |||| ||||| |||||| | ||||||| |||||||    
T  4560584 cataagttcttccaaacaacctcacaagtgcttatgtcaatagataagctcaaat 4560638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 5069690 - 5069760
Alignment:
Q  4 tataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 74  Q
    ||||| ||||||| |||||| ||||| | |||| || ||||||||||| |||||||||||  |||||||||    
T  5069690 tataatttataagctgttttcataagatatcttcgaaagcttatgaaaataagctgaaaatgacttatgaa 5069760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 116
Target Start/End: Complemental strand, 7918513 - 7918412
Alignment:
Q  14 aagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaacaat 113  Q
    ||||||||||  |||||| |||||||||||||||  || |||| || ||||| |||||||| || ||  || |||||||||||||| ||| ||||||| |    
T  7918513 aagttgttttcgtaagctatcttggagagcttattgaaataagttggaaacagcttatgaacatgtc-ttaagttgttttcataagctctcccaaacagt 7918415  T
Q  114 ctc 116  Q
    |||    
T  7918414 ctc 7918412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 8060662 - 8060732
Alignment:
Q  4 tataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 74  Q
    ||||| ||||||| |||||| ||||||  || | ||||||||||| || ||||||||||| ||||||||||    
T  8060662 tataacttataagctgttttcataagcaatcctagagagcttatggaaataagctgaaaataacttatgaa 8060732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 21653098 - 21653144
Alignment:
Q  28 agctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 74  Q
    |||| ||||||||||||||||||| ||||||||||| | ||||||||    
T  21653098 agctatcttggagagcttatgaaaataagctgaaaatagcttatgaa 21653144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 77
Target Start/End: Complemental strand, 37353319 - 37353253
Alignment:
Q  11 tataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatat 77  Q
    |||||| ||||||  |||||| |||| |||||||||||||| ||| |||||||||  ||||||||||    
T  37353319 tataagctgttttcttaagctatctttgagagcttatgaaaataatctgaaaacagtttatgaatat 37353253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 6864534 - 6864477
Alignment:
Q  6 taagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaa 63  Q
    |||||||||||||||||| ||||||| | |||||||||||  | || |||||||||||    
T  6864534 taagttataagttgttttcataagctattttggagagcttgaggaaataagctgaaaa 6864477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 11494155 - 11494208
Alignment:
Q  20 ttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatga 73  Q
    |||| ||||||| ||||| ||||||||||||| |||||||||| || |||||||    
T  11494155 ttttcataagctatcttgaagagcttatgaaaataagctgaaagcagcttatga 11494208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 11795085 - 11795146
Alignment:
Q  4 tataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaaca 65  Q
    ||||||||||||| || ||| ||||||| |  ||||||||||||| || |||||||||||||    
T  11795085 tataagttataagctgatttcataagctattatggagagcttatggaaataagctgaaaaca 11795146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 13652298 - 13652347
Alignment:
Q  94 cataagttcttccaaacaatctcataagtgtttatgttagtagataaact 143  Q
    |||||| |||||||||||| |||| ||||| |||||| ||||||||||||    
T  13652298 cataagctcttccaaacaacctcacaagtgcttatgtgagtagataaact 13652347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 13710941 - 13710990
Alignment:
Q  94 cataagttcttccaaacaatctcataagtgtttatgttagtagataaact 143  Q
    |||||| |||||||||||| |||| ||||| |||||| ||||||||||||    
T  13710941 cataagctcttccaaacaacctcacaagtgcttatgtgagtagataaact 13710990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 148
Target Start/End: Complemental strand, 30191211 - 30191075
Alignment:
Q  11 tataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaac 110  Q
    |||||| | |||||||||||| || || |  | ||||| || |||||||||||||| || |||| || ||| || ||||||| |||||| ||| ||||||    
T  30191211 tataagctattttgataagctatcctgaaatgtttatggaaataagctgaaaacaagttttgaacatgtca-taagttgtttccataagctctcccaaac 30191113  T
Q  111 aatctcataagtgtttatgttagtagataaactcaaat 148  Q
    | ||| | ||||| |||||  | |||||||||||||||    
T  30191112 agtctaacaagtgcttatgccaatagataaactcaaat 30191075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 30277315 - 30277254
Alignment:
Q  11 tataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatg 72  Q
    |||||| |||||| ||||||| || | ||||| ||||| || ||||||||||||||||||||    
T  30277315 tataagctgttttcataagctatcctagagagtttatggaaataagctgaaaacaacttatg 30277254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 148
Target Start/End: Complemental strand, 39551279 - 39551143
Alignment:
Q  11 tataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaac 110  Q
    ||||||||||||| ||||||| || |||||||||||| ||| |||| | |||||| ||| || | || ||| || ||||||| ||||| |||| ||||||    
T  39551279 tataagttgttttcataagctttcctggagagcttataaaaataagttaaaaacagcttttggacatgtca-taagttgtttccataaattctcccaaac 39551181  T
Q  111 aatctcataagtgtttatgttagtagataaactcaaat 148  Q
    | | ||| || || |||| |  |||||||| |||||||    
T  39551180 agtttcacaaatgcttatatccgtagataatctcaaat 39551143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 156
Target Start/End: Original strand, 2213484 - 2213552
Alignment:
Q  88 tgttttcataagttcttccaaacaatctcataagtgtttatgttagtagataaactcaaatgaaccaat 156  Q
    ||||||||||| | || ||||||| | ||| ||||||||||| ||||||||||  |||||| |||||||    
T  2213484 tgttttcataactactaccaaacagtatcacaagtgtttatgctagtagataatttcaaataaaccaat 2213552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 74
Target Start/End: Original strand, 11185220 - 11185284
Alignment:
Q  10 ttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 74  Q
    ||||||||||||||  | |||| || ||||||||| ||| || |||| |||||||||||||||||    
T  11185220 ttataagttgttttcgttagctatcatggagagctgatggaaataagttgaaaacaacttatgaa 11185284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 36338342 - 36338278
Alignment:
Q  1 ttgtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaaca 65  Q
    ||||||||| |||||| |||||| ||||  | |||| |||| ||||||||| |||||||||||||    
T  36338342 ttgtataagatataagctgtttttataaaatatctttgagaacttatgaaaataagctgaaaaca 36338278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 38036192 - 38036128
Alignment:
Q  1 ttgtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaaca 65  Q
    |||| |||| |||||  ||||||||| |||| |||||||||||||||  || |||||||||||||    
T  38036192 ttgtgtaagctataaactgttttgattagctatcttggagagcttattgaaataagctgaaaaca 38036128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 64
Target Start/End: Complemental strand, 39881821 - 39881769
Alignment:
Q  12 ataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaac 64  Q
    |||| ||||||| ||||||| || ||||||||||||| || ||||||||||||    
T  39881821 ataaattgtttttataagctatcatggagagcttatggaaataagctgaaaac 39881769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 3e-17; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 139
Target Start/End: Complemental strand, 30573977 - 30573857
Alignment:
Q  18 tgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaacaatctca 117  Q
    |||||| ||||||| |||||||||||| |||||  ||||||||||||| |||||||| ||  || ||  |||||||||||||||||  ||||||| ||||    
T  30573977 tgttttcataagctatcttggagagctgatgaacataagctgaaaacagcttatgaacatgcca-taatttgttttcataagttctcacaaacaaactca 30573879  T
Q  118 taagtgtttatgttagtagata 139  Q
     ||||| |||||| ||||||||    
T  30573878 caagtgcttatgtcagtagata 30573857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 140
Target Start/End: Original strand, 43115049 - 43115184
Alignment:
Q  4 tataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttct 103  Q
    |||||| ||||||||||||| || | || || | ||||||||||| || |||||||||||||| ||||| | || ||| || ||||||| |||||  |||    
T  43115049 tataagctataagttgttttcatgaactatcattgagagcttatggaaataagctgaaaacaagttatggacatgtca-taagttgtttccataaactct 43115147  T
Q  104 tccaaacaatctcataagtgtttatgttagtagataa 140  Q
    |||||||||||||| ||||| |||||| | |||||||    
T  43115148 tccaaacaatctcacaagtgattatgtcaatagataa 43115184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 101 - 164
Target Start/End: Original strand, 30657375 - 30657438
Alignment:
Q  101 tcttccaaacaatctcataagtgtttatgttagtagataaactcaaatgaaccaattcaaacag 164  Q
    ||||||||||||||||| ||||| |||||| ||||||||||||||||| || ||||||||||||    
T  30657375 tcttccaaacaatctcaaaagtgcttatgtcagtagataaactcaaataaatcaattcaaacag 30657438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 109
Target Start/End: Complemental strand, 39602288 - 39602183
Alignment:
Q  3 gtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttc 102  Q
    |||||||||||||| |||||| ||||||| |||| |||| ||||||||| |||| ||||||||| ||||||| || ||| || | ||| |||||||| ||    
T  39602288 gtataagttataagctgttttcataagctatctttgagaacttatgaaaataagttgaaaacaatttatgaacatgtca-taagctgtcttcataagctc 39602190  T
Q  103 ttccaaa 109  Q
    |||||||    
T  39602189 ttccaaa 39602183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 11 - 111
Target Start/End: Original strand, 21367667 - 21367767
Alignment:
Q  11 tataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa-tatttcagtacgttgttttcataagttcttccaaa 109  Q
    ||||||||||||| ||||||| ||||||||| ||||||||| ||||||||||||| ||| ||||  || ||| || | |||||||||||||||| |||||    
T  21367667 tataagttgttttcataagctatcttggagaacttatgaaaataagctgaaaacagcttgtgaacaatgtca-taagctgttttcataagttctcccaaa 21367765  T
Q  110 ca 111  Q
    ||    
T  21367766 ca 21367767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 40665419 - 40665492
Alignment:
Q  1 ttgtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 74  Q
    |||| ||||||||||| |||||| ||||| | ||||||||||||||| ||| ||||||||||||| ||||||||    
T  40665419 ttgtgtaagttataagatgttttcataagttatcttggagagcttataaaaataagctgaaaacagcttatgaa 40665492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 88 - 165
Target Start/End: Complemental strand, 44014792 - 44014715
Alignment:
Q  88 tgttttcataagttcttccaaacaatctcataagtgtttatgttagtagataaactcaaatgaaccaattcaaacagg 165  Q
    |||||||||||||| |  |||||| ||||| ||||||||||| |||||||||||||||||| | ||||| ||||||||    
T  44014792 tgttttcataagttttctcaaacagtctcacaagtgtttatgctagtagataaactcaaataagccaatccaaacagg 44014715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 148
Target Start/End: Original strand, 24281072 - 24281183
Alignment:
Q  36 tggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaacaatctcataagtgtttatgttagta 135  Q
    |||||||||||||||| |||| ||||||||||||||| | || ||| || |||||||||||||| |||  ||||||||| || ||||| ||||   ||||    
T  24281072 tggagagcttatgaaagtaagttgaaaacaacttatggagatatca-taagttgttttcataagctctctcaaacaatcacacaagtgcttataccagta 24281170  T
Q  136 gataaactcaaat 148  Q
    |||| ||||||||    
T  24281171 gatagactcaaat 24281183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 402620 - 402549
Alignment:
Q  3 gtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 74  Q
    |||||||||||||| |||||| |||| || ||||| ||| ||| ||||||||||||||||||| ||||||||    
T  402620 gtataagttataagctgtttttataatctatcttgaagaacttgtgaaattaagctgaaaacagcttatgaa 402549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 123
Target Start/End: Complemental strand, 14548798 - 14548680
Alignment:
Q  4 tataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttct 103  Q
    |||||| ||||||||||||| ||||| | |  ||||||||||||| || ||||||||||||| | ||| || || ||| ||||||||||||||||| |||    
T  14548798 tataagctataagttgttttcataagttattctggagagcttatggaaataagctgaaaacagcctattaaaatgtca-tacgttgttttcataagctct 14548700  T
Q  104 tccaaacaatctcataagtg 123  Q
      |||||| ||||| |||||    
T  14548699 ctcaaacagtctcacaagtg 14548680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 116
Target Start/End: Complemental strand, 54837102 - 54837000
Alignment:
Q  13 taagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaacaa 112  Q
    |||||| |||| ||||||| ||||||| ||||||| ||| ||||| |||||||| ||||||| || ||| || | ||||||||||| ||||||||||||     
T  54837102 taagttattttcataagctatcttggacagcttataaaaataagcggaaaacaagttatgaacatgtca-taagctgttttcataaattcttccaaacag 54837004  T
Q  113 tctc 116  Q
    ||||    
T  54837003 tctc 54837000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 1816573 - 1816674
Alignment:
Q  1 ttgtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagt 100  Q
    ||||||||| ||||||||||||| ||||||| |  |||||||||||| ||| ||||||||||||| | |||||| || ||| || ||| |||||||| ||    
T  1816573 ttgtataagatataagttgttttcataagctatactggagagcttatcaaaataagctgaaaacagcctatgaaaatgtca-taagttattttcatatgt 1816671  T
Q  101 tct 103  Q
    |||    
T  1816672 tct 1816674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 90 - 148
Target Start/End: Complemental strand, 41848708 - 41848650
Alignment:
Q  90 ttttcataagttcttccaaacaatctcataagtgtttatgttagtagataaactcaaat 148  Q
    |||||||||| || | |||||||||| | ||||||||||||||||||||||||||||||    
T  41848708 ttttcataagctcgtacaaacaatcttacaagtgtttatgttagtagataaactcaaat 41848650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 18405911 - 18405854
Alignment:
Q  1 ttgtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagct 58  Q
    ||||||| | ||||||||||||| ||||||| ||||||||| ||||||||||||||||    
T  18405911 ttgtatatgctataagttgttttcataagctatcttggagaacttatgaaattaagct 18405854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 34610886 - 34610813
Alignment:
Q  1 ttgtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 74  Q
    ||||| ||||||||||||| ||| ||||||| |||||| || ||||||||| | |||||||||| |||||||||    
T  34610886 ttgtacaagttataagttgctttcataagctatcttggcgaacttatgaaaatcagctgaaaaccacttatgaa 34610813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 128
Target Start/End: Original strand, 45541563 - 45541687
Alignment:
Q  3 gtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttc 102  Q
    ||||||| ||||  || |||| ||||||| ||||||| | ||||||| | ||| ||||||||| |||||||| || ||| || | |||||||||||||||    
T  45541563 gtataagctatagtttattttcataagctatcttggataacttatgagaataacctgaaaacagcttatgaacatgtca-taagctgttttcataagttc 45541661  T
Q  103 ttccaaacaatctcataagtgtttat 128  Q
    ||| ||||| ||| | ||||||||||    
T  45541662 ttctaaacagtcttacaagtgtttat 45541687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 2719458 - 2719529
Alignment:
Q  1 ttgtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatg 72  Q
    |||| |||| |||||  |||||| ||||||| ||||||||| ||||||||| |||||||| |||||||||||    
T  2719458 ttgtttaagctataaactgttttcataagctatcttggagaacttatgaaaataagctgagaacaacttatg 2719529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 20669172 - 20669235
Alignment:
Q  11 tataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 74  Q
    |||||| |||||| ||||||| |||||||||||||||| || ||||| ||||||| ||||||||    
T  20669172 tataagctgttttcataagctatcttggagagcttatgtaaataagcggaaaacagcttatgaa 20669235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 25776117 - 25776180
Alignment:
Q  11 tataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 74  Q
    ||||||||||||| ||||| ||||||| ||| |||||| || ||||||||||||| ||||||||    
T  25776117 tataagttgttttcataagttgtcttgaagaacttatggaagtaagctgaaaacagcttatgaa 25776180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 33883820 - 33883757
Alignment:
Q  11 tataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 74  Q
    |||| |||||||  ||||||| |||| |||| ||||||||| ||||||||||||||||||||||    
T  33883820 tatatgttgtttacataagctatcttagagaacttatgaaaataagctgaaaacaacttatgaa 33883757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 36887504 - 36887567
Alignment:
Q  11 tataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 74  Q
    ||||||||||||| ||||||  ||||| ||| ||||||||| ||||||||||||| ||||||||    
T  36887504 tataagttgttttcataagccatcttgaagaacttatgaaaataagctgaaaacatcttatgaa 36887567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 117
Target Start/End: Original strand, 37273141 - 37273239
Alignment:
Q  18 tgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaacaatctca 117  Q
    |||||| ||||||| ||||||||| |||||| || |||| ||||||||||||||| | || ||| || ||||||| |||||| ||| ||||||| |||||    
T  37273141 tgttttcataagctatcttggagaacttatggaaataagttgaaaacaacttatggacatgtca-taagttgtttccataagctctcccaaacagtctca 37273239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 113
Target Start/End: Original strand, 51130749 - 51130851
Alignment:
Q  10 ttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaa 109  Q
    ||||||| |||||| ||||||| || |||||||||  ||||| |||||||||| ||||||||| | || ||| ||| | ||||||||||| ||| |||||    
T  51130749 ttataaggtgttttcataagctatcatggagagctattgaaaataagctgaaagcaacttatggacatgtca-tacatggttttcataagctctcccaaa 51130847  T
Q  110 caat 113  Q
    ||||    
T  51130848 caat 51130851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 53789531 - 53789468
Alignment:
Q  11 tataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 74  Q
    ||||||||||| | ||||||| || |||||| ||||||||||||||||||||| | ||||||||    
T  53789531 tataagttgttatcataagctatcatggagaacttatgaaattaagctgaaaaaagcttatgaa 53789468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 72
Target Start/End: Complemental strand, 1217875 - 1217809
Alignment:
Q  6 taagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatg 72  Q
    ||||||||||| |||||| ||||||| || | |||| ||||||||| |||| |||||||||||||||    
T  1217875 taagttataagctgttttcataagctatccttgagaacttatgaaagtaagatgaaaacaacttatg 1217809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 164
Target Start/End: Original strand, 11253495 - 11253653
Alignment:
Q  4 tataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttct 103  Q
    |||||| |||||| |||||  ||||||| || | ||||||||| | || || ||||||||||  ||||  |||| ||| || |||||||| |||| ||||    
T  11253495 tataagctataagctgtttc-ataagctatcctagagagcttagggaaataggctgaaaacagtttatagatatgtca-taagttgtttttataaattct 11253592  T
Q  104 tccaaacaatctcataagtgtttatgttagtagataaactcaaatgaaccaattcaaacag 164  Q
     ||||||| ||||  ||||| ||||| |||||||||| ||||||| |  ||||||||||||    
T  11253593 gccaaacagtctctcaagtgcttatgctagtagataatctcaaataagtcaattcaaacag 11253653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 164
Target Start/End: Complemental strand, 25459616 - 25459548
Alignment:
Q  96 taagttcttccaaacaatctcataagtgtttatgttagtagataaactcaaatgaaccaattcaaacag 164  Q
    |||| ||||||||||||||||| ||||| ||||| |||| ||||| ||||||| || |||| |||||||    
T  25459616 taagctcttccaaacaatctcacaagtgcttatgctagttgataagctcaaataaatcaatccaaacag 25459548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 34382934 - 34383002
Alignment:
Q  3 gtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttat 71  Q
    |||||||||||||||| |||| ||||||| || || | |||||| |||| |||| ||||||||||||||    
T  34382934 gtataagttataagttcttttcataagctatcctgaaaagcttaagaaaataagatgaaaacaacttat 34383002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 34924599 - 34924547
Alignment:
Q  20 ttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatg 72  Q
    |||| ||||||| |||| |||||||||||||| ||||||||||||||| ||||    
T  34924599 ttttcataagctatcttagagagcttatgaaaataagctgaaaacaacatatg 34924547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 113
Target Start/End: Complemental strand, 47249534 - 47249455
Alignment:
Q  33 tcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaacaat 113  Q
    ||||||||  ||||||||| |||||  ||||||||||||||| || ||| || || |||||||||||||||| ||||||||    
T  47249534 tcttggaggacttatgaaaataagccaaaaacaacttatgaacatgtca-taagtggttttcataagttctttcaaacaat 47249455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 124
Target Start/End: Original strand, 47513670 - 47513765
Alignment:
Q  28 agctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaacaatctcataagtgt 124  Q
    |||| ||||||||||||||||||| |||  |||||||||||||||||  | ||| ||  |||||||||||||| || || |||| ||||| ||||||    
T  47513670 agctatcttggagagcttatgaaaataaattgaaaacaacttatgaacgtgtca-taacttgttttcataagtcctcccgaacagtctcacaagtgt 47513765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 39980729 - 39980792
Alignment:
Q  11 tataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 74  Q
    ||||||||||||| ||||||| | ||||||| ||||||||| |||| |||||| | ||||||||    
T  39980729 tataagttgtttttataagctatattggagaacttatgaaaataagttgaaaaaagcttatgaa 39980792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 41633361 - 41633420
Alignment:
Q  12 ataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttat 71  Q
    ||||| |||||| || |||| | ||||||||||||||||| |||||||||||||| ||||    
T  41633361 ataagctgttttcatcagctattttggagagcttatgaaaataagctgaaaacaatttat 41633420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 41 - 148
Target Start/End: Original strand, 42745068 - 42745174
Alignment:
Q  41 agcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaacaatctcataagtgtttatgttagtagataa 140  Q
    |||||||| || |||| ||||||||||||||||| || ||| || ||||||| ||||| |||||| ||| ||| ||| ||||| ||||| |||||  |||    
T  42745068 agcttatggaaataagatgaaaacaacttatgaacatgtca-taagttgtttacataaattcttctaaataatatcacaagtgcttatgatagtaagtaa 42745166  T
Q  141 actcaaat 148  Q
    ||| ||||    
T  42745167 acttaaat 42745174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 166
Target Start/End: Original strand, 44237524 - 44237571
Alignment:
Q  119 aagtgtttatgttagtagataaactcaaatgaaccaattcaaacaggt 166  Q
    ||||| |||||| ||||||||||||||||| |||||||| ||||||||    
T  44237524 aagtgcttatgtcagtagataaactcaaataaaccaatttaaacaggt 44237571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 163
Target Start/End: Complemental strand, 48286887 - 48286729
Alignment:
Q  4 tataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttct 103  Q
    ||||||||||||  |||||| ||||| | || || |||||||||  || |||||||| |||   ||||| | || || ||| ||||||||||||||||||    
T  48286887 tataagttataaactgttttcataagttatcatgtagagcttatagaaataagctgataacggtttatggacatgtc-gtaggttgttttcataagttct 48286789  T
Q  104 tccaaacaatctcataagtgtttatgttagtagataaactcaaatgaaccaattcaaaca 163  Q
     || || | ||||| | |||||| |||  |||||||| ||||||| || |||||||||||    
T  48286788 ccctaatagtctcaaaggtgtttttgtccgtagataagctcaaataaatcaattcaaaca 48286729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 2825149 - 2825199
Alignment:
Q  13 taagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaa 63  Q
    |||||| |||| ||||||| ||||||||||||||||||| |||||| ||||    
T  2825149 taagttattttcataagctatcttggagagcttatgaaaataagcttaaaa 2825199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 22203420 - 22203470
Alignment:
Q  1 ttgtataagttataagttgttttgataagctgtcttggagagcttatgaaa 51  Q
    ||||||||  ||||||||||||| ||||||| ||||||||| |||||||||    
T  22203420 ttgtataatctataagttgttttcataagctatcttggagaacttatgaaa 22203470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 103
Target Start/End: Complemental strand, 24085414 - 24085316
Alignment:
Q  5 ataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttct 103  Q
    ||||| ||||| |||||||  |||||| ||||||||| ||| ||||| ||||||||||||| | |||||| | | |  || | ||||||||||||||||    
T  24085414 ataagctataatttgtttttgtaagctatcttggagaacttgtgaaaataagctgaaaacagcgtatgaacagtaccataagctgttttcataagttct 24085316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 140
Target Start/End: Original strand, 50211809 - 50211863
Alignment:
Q  86 gttgttttcataagttcttccaaacaatctcataagtgtttatgttagtagataa 140  Q
    ||||||||||||||||||  |||||| ||| | ||||| ||||||||||||||||    
T  50211809 gttgttttcataagttctctcaaacagtcttacaagtgcttatgttagtagataa 50211863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 111
Target Start/End: Complemental strand, 50600254 - 50600149
Alignment:
Q  5 ataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttctt 104  Q
    ||||| |||||| |||||| || |||| | ||||||| ||||||||| ||||||||||||| ||  || | || ||| |  |||||||| ||||||||||    
T  50600254 ataagctataagctgttttcatcagctatattggagaacttatgaaaataagctgaaaacagctcgtggacatgtca-tgagttgtttttataagttctt 50600156  T
Q  105 ccaaaca 111  Q
    |||||||    
T  50600155 ccaaaca 50600149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 52618996 - 52619066
Alignment:
Q  4 tataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 74  Q
    ||||||||||||| |||||| | ||||| ||||| ||||||| ||||| |||| |||||| | ||||||||    
T  52618996 tataagttataagctgttttcacaagctatcttgaagagcttgtgaaaataaggtgaaaatagcttatgaa 52619066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 1125843 - 1125778
Alignment:
Q  4 tataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaactt 69  Q
    |||||| ||||| |||||||  |||| | |||||||||||||||| || |||||||||| ||||||    
T  1125843 tataagctataacttgttttcttaagttatcttggagagcttatggaagtaagctgaaagcaactt 1125778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 117
Target Start/End: Original strand, 21574515 - 21574595
Alignment:
Q  36 tggagagcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaacaatctca 117  Q
    ||||||||||||| || |||||| ||| || |||||||| || ||| || |||||||||||||| ||| ||||||| |||||    
T  21574515 tggagagcttatggaaataagctaaaagcagcttatgaacatgtca-taagttgttttcataagctctcccaaacagtctca 21574595  T

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Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 24785195 - 24785268
Alignment:
Q  1 ttgtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 74  Q
    ||||||||  |||||  |||||| ||||||| || | ||||||||||| || |||||| |||||||||||||||    
T  24785195 ttgtataatctataacgtgttttcataagctatcctcgagagcttatgtaaataagctaaaaacaacttatgaa 24785268  T

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Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 72
Target Start/End: Original strand, 25185985 - 25186046
Alignment:
Q  11 tataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatg 72  Q
    ||||||| ||||| ||||||| ||||||| | ||| ||||| |||| |||||||||||||||    
T  25185985 tataagtggtttttataagctatcttggaaatcttgtgaaaataagatgaaaacaacttatg 25186046  T

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Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 30443883 - 30443999
Alignment:
Q  1 ttgtataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaatatt-tcagtacgttgttttcataag 99  Q
    ||||||| | |||||| |||||| |||| || | ||||||| ||||||||| ||||||||||| | ||| |||| ||| ||| || | ||||||||||||    
T  30443883 ttgtatatgctataagctgtttttataaactatattggagaacttatgaaaataagctgaaaaaagcttgtgaaaattgtca-taagctgttttcataag 30443981  T
Q  100 ttcttccaaacaatctca 117  Q
     ||| ||||||| |||||    
T  30443982 ctctaccaaacagtctca 30443999  T

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Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 164
Target Start/End: Complemental strand, 35903158 - 35903085
Alignment:
Q  91 tttcataagttcttccaaacaatctcataagtgtttatgttagtagataaactcaaatgaaccaattcaaacag 164  Q
    |||||||||||||   ||||| | ||||||||| |||||||||| ||| ||||||||| |  ||||||||||||    
T  35903158 tttcataagttctctgaaacagtgtcataagtgcttatgttagttgatgaactcaaataagtcaattcaaacag 35903085  T

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Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 148
Target Start/End: Original strand, 40665514 - 40665555
Alignment:
Q  107 aaacaatctcataagtgtttatgttagtagataaactcaaat 148  Q
    |||||||||  |||||||||||||||||||||||||| ||||    
T  40665514 aaacaatctactaagtgtttatgttagtagataaacttaaat 40665555  T

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Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 44061100 - 44061032
Alignment:
Q  4 tataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatga 73  Q
    |||||| ||||||||||||| ||| | | |||| |||| |||||||||||||||| |||||| |||||||    
T  44061100 tataagctataagttgttttcatatgatatcttagagaacttatgaaattaagct-aaaacagcttatga 44061032  T

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Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 72
Target Start/End: Original strand, 48991875 - 48991912
Alignment:
Q  35 ttggagagcttatgaaattaagctgaaaacaacttatg 72  Q
    |||||||| |||||||| ||||||||||||||||||||    
T  48991875 ttggagagattatgaaaataagctgaaaacaacttatg 48991912  T

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Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 2100234 - 2100190
Alignment:
Q  2 tgtataagttataagttgttttgataagctgtcttggagagctta 46  Q
    |||||||| ||||||||||||| ||||| | ||||||||||||||    
T  2100234 tgtataagctataagttgttttcataagttatcttggagagctta 2100190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 16790439 - 16790387
Alignment:
Q  20 ttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatg 72  Q
    |||| ||||||| ||||||| ||||||||||| ||| ||||||||| ||||||    
T  16790439 ttttcataagctatcttggatagcttatgaaaataaactgaaaacagcttatg 16790387  T

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Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 21862228 - 21862184
Alignment:
Q  28 agctgtcttggagagcttatgaaattaagctgaaaacaacttatg 72  Q
    |||| ||| |||||||||||| || ||||||||||||||||||||    
T  21862228 agctatctgggagagcttatggaaataagctgaaaacaacttatg 21862184  T

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Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 23785248 - 23785316
Alignment:
Q  4 tataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatg 72  Q
    |||||| |||||  |||||| | ||||| || ||||||||||||| ||  |||||||||||||||||||    
T  23785248 tataagctataaactgttttcacaagctctcatggagagcttatggaaacaagctgaaaacaacttatg 23785316  T

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Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 148
Target Start/End: Original strand, 25447625 - 25447677
Alignment:
Q  96 taagttcttccaaacaatctcataagtgtttatgttagtagataaactcaaat 148  Q
    ||||||||||| |||||||||||||||| |||||| || ||| ||||| ||||    
T  25447625 taagttcttcctaacaatctcataagtgcttatgtcaggagagaaactaaaat 25447677  T

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Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 157
Target Start/End: Complemental strand, 26330363 - 26330248
Alignment:
Q  41 agcttatgaaattaagctgaaaacaacttatgaatatttcagtacgttgttttcataagttcttccaaacaatctcataagtgtttatgttagtagataa 140  Q
    |||||||| || ||| ||||||| ||| |||||| || |||| | |||||||||||||| ||||| ||||| ||||| || |  |||| | |||||||||    
T  26330363 agcttatggaaataacctgaaaagaacctatgaacatgtcagaa-gttgttttcataagctcttctaaacagtctcacaaatacttatttcagtagataa 26330265  T
Q  141 actcaaatgaaccaatt 157  Q
     ||||||| || |||||    
T  26330264 cctcaaataaatcaatt 26330248  T

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Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 72
Target Start/End: Complemental strand, 34414829 - 34414793
Alignment:
Q  36 tggagagcttatgaaattaagctgaaaacaacttatg 72  Q
    ||||||| |||||||| ||||||||||||||||||||    
T  34414829 tggagagtttatgaaaataagctgaaaacaacttatg 34414793  T

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Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 138
Target Start/End: Original strand, 48397651 - 48397703
Alignment:
Q  86 gttgttttcataagttcttccaaacaatctcataagtgtttatgttagtagat 138  Q
    ||||||||||| || ||||||||||||||||| || || ||||| ||||||||    
T  48397651 gttgttttcattagctcttccaaacaatctcacaaatgcttatgctagtagat 48397703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 148
Target Start/End: Complemental strand, 49465659 - 49465599
Alignment:
Q  88 tgttttcataagttcttccaaacaatctcataagtgtttatgttagtagataaactcaaat 148  Q
    |||||||||||||||| | ||||||| ||| ||||| ||||| ||||| ||||||| ||||    
T  49465659 tgttttcataagttctccgaaacaatatcacaagtgcttatggtagtaaataaactgaaat 49465599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 143
Target Start/End: Original strand, 50015957 - 50016017
Alignment:
Q  83 tacgttgttttcataagttcttccaaacaatctcataagtgtttatgttagtagataaact 143  Q
    |||||| ||||||||||||||  |||||| ||||| |||||||||||  | ||||||||||    
T  50015957 tacgttcttttcataagttctctcaaacagtctcacaagtgtttatgccaatagataaact 50016017  T

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Target: scaffold0286 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 16103 - 16171
Alignment:
Q  4 tataagttataagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatg 72  Q
    |||||| |||||||||||||  |||||||||||||| || ||||| || |||| |||||||||||||||    
T  16103 tataagatataagttgttttcctaagctgtcttggaaagattatggaaataagttgaaaacaacttatg 16171  T

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Target: scaffold0199 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 93 - 148
Target Start/End: Original strand, 6891 - 6946
Alignment:
Q  93 tcataagttcttccaaacaatctcataagtgtttatgttagtagataaactcaaat 148  Q
    ||||||| ||| ||||||| ||||| ||||||||||| ||||||||||||||||||    
T  6891 tcataagctctcccaaacagtctcacaagtgtttatgctagtagataaactcaaat 6946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 148
Target Start/End: Complemental strand, 9774 - 9712
Alignment:
Q  86 gttgttttcataagttcttccaaacaatctcataagtgtttatgttagtagataaactcaaat 148  Q
    ||||||| |||| | ||| ||||||| ||||| |||| |||||||||||||||||||||||||    
T  9774 gttgtttccataggctctcccaaacagtctcacaagtatttatgttagtagataaactcaaat 9712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 4991 - 4942
Alignment:
Q  25 ataagctgtcttggagagcttatgaaattaagctgaaaacaacttatgaa 74  Q
    |||||||  ||||||||||||||| | |||||||||||||||||||||||    
T  4991 ataagctaccttggagagcttatggagttaagctgaaaacaacttatgaa 4942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 165
Target Start/End: Complemental strand, 53823 - 53758
Alignment:
Q  100 ttcttccaaacaatctcataagtgtttatgttagtagataaactcaaatgaaccaattcaaacagg 165  Q
    ||||||||||||||||||  |||||||||| || ||||||||  |||||||| |||| ||||||||    
T  53823 ttcttccaaacaatctcaacagtgtttatgctactagataaaaccaaatgaatcaatccaaacagg 53758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 306329 - 306387
Alignment:
Q  14 aagttgttttgataagctgtcttggagagcttatgaaattaagctgaaaacaacttatg 72  Q
    |||||||||| ||||||| || | ||||||||||| || ||||||||||||| ||||||    
T  306329 aagttgttttcataagctatcctagagagcttatgtaagtaagctgaaaacagcttatg 306387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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