View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15449_low_39 (Length: 293)
Name: NF15449_low_39
Description: NF15449
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15449_low_39 |
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Alignment Details
Target: chr7 (Bit Score: 253; Significance: 1e-141; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 14 - 274
Target Start/End: Original strand, 48156101 - 48156361
Alignment:
| Q |
14 |
agatataagaatccaaacagaaaaatcacagcgccacattctttgataccttcttttaagcataagataacatgaattcttatgagaaccccaacttctt |
113 |
Q |
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| T |
48156101 |
agatataagaatccaaacagaaaaatcacagcgccacattctttgataccttcttttaagcataagataacatgaattcttatgagaaccccaacttctt |
48156200 |
T |
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| Q |
114 |
ctatgacatatacgaggactccatttataaagaatgagttgatattattcagcagagaaccaacatgagaattcattcaatattaaacacgtatatcaaa |
213 |
Q |
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||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48156201 |
ctatgacatatacgaggacagcatttataaagaatgagttgatattattcagcagagaaccaacatgagaattcattcaatattaaacacgtatatcaaa |
48156300 |
T |
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| Q |
214 |
aaatatgttacaacattttttctcatatttataagttatcttagtttccttagtggcaagg |
274 |
Q |
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| T |
48156301 |
aaatatgttacaacattttttctcatatttataagttatcttagtttccttagtggcaagg |
48156361 |
T |
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