View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1544_low_2 (Length: 463)

Name: NF1544_low_2
Description: NF1544
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1544_low_2
NF1544_low_2
[»] chr6 (29 HSPs)
chr6 (17-448)||(22019206-22019635)
chr6 (22-186)||(22018484-22018648)
chr6 (311-448)||(4222432-4222567)
chr6 (312-442)||(12776394-12776524)
chr6 (311-448)||(9903819-9903956)
chr6 (312-442)||(33202617-33202747)
chr6 (123-252)||(12776252-12776381)
chr6 (125-252)||(26839020-26839147)
chr6 (87-193)||(9904525-9904631)
chr6 (123-193)||(4221799-4221869)
chr6 (123-205)||(4222572-4222654)
chr6 (136-250)||(9903823-9903937)
chr6 (134-250)||(4222449-4222563)
chr6 (315-424)||(26839022-26839131)
chr6 (123-251)||(33202424-33202552)
chr6 (123-193)||(26838014-26838084)
chr6 (363-442)||(26838633-26838714)
chr6 (181-250)||(12776397-12776466)
chr6 (134-250)||(22019223-22019339)
chr6 (315-431)||(22019402-22019518)
chr6 (325-424)||(12776270-12776369)
chr6 (112-178)||(9903636-9903702)
chr6 (123-193)||(33203292-33203362)
chr6 (378-442)||(31373179-31373243)
chr6 (331-431)||(33202435-33202535)
chr6 (141-250)||(33202620-33202729)
chr6 (363-431)||(4222575-4222643)
chr6 (311-359)||(26838914-26838962)
chr6 (378-431)||(11797113-11797166)
[»] chr2 (48 HSPs)
chr2 (17-448)||(44329314-44329743)
chr2 (17-448)||(31297697-31298131)
chr2 (77-398)||(36584104-36584423)
chr2 (22-186)||(44328592-44328756)
chr2 (312-442)||(44656119-44656249)
chr2 (313-448)||(10601740-10601875)
chr2 (103-252)||(15630242-15630391)
chr2 (311-442)||(15630049-15630180)
chr2 (84-190)||(44656413-44656519)
chr2 (331-448)||(6172834-6172951)
chr2 (19-188)||(15629333-15629491)
chr2 (91-187)||(6172942-6173038)
chr2 (84-192)||(31298694-31298802)
chr2 (86-190)||(44655432-44655536)
chr2 (86-193)||(3259969-3260076)
chr2 (149-252)||(34414873-34414976)
chr2 (84-193)||(31477-31586)
chr2 (88-179)||(3260091-3260182)
chr2 (315-427)||(15630244-15630356)
chr2 (134-250)||(15630060-15630176)
chr2 (315-431)||(31297813-31297929)
chr2 (103-193)||(36583450-36583540)
chr2 (134-250)||(31297998-31298114)
chr2 (315-416)||(34414875-34414976)
chr2 (315-424)||(36584251-36584360)
chr2 (134-250)||(10601757-10601873)
chr2 (134-250)||(44329331-44329447)
chr2 (315-431)||(44329510-44329626)
chr2 (172-252)||(44656313-44656393)
chr2 (195-252)||(10601943-10602000)
chr2 (181-250)||(36584118-36584187)
chr2 (134-250)||(44656130-44656246)
chr2 (151-198)||(10602135-10602182)
chr2 (335-457)||(45275384-45275504)
chr2 (21-75)||(3259933-3259987)
chr2 (315-389)||(44656315-44656389)
chr2 (351-424)||(44703081-44703155)
chr2 (315-371)||(10601945-10602001)
chr2 (20-72)||(44655395-44655447)
chr2 (373-424)||(31534-31585)
chr2 (123-192)||(40439994-40440063)
chr2 (372-424)||(40440012-40440064)
chr2 (154-192)||(6172233-6172271)
chr2 (142-232)||(6172859-6172949)
chr2 (21-75)||(31298782-31298836)
chr2 (21-75)||(44656499-44656553)
chr2 (378-431)||(31298699-31298752)
chr2 (379-423)||(29425508-29425552)
[»] chr5 (62 HSPs)
chr5 (22-442)||(42056468-42056892)
chr5 (110-448)||(17646271-17646611)
chr5 (17-193)||(2898008-2898184)
chr5 (84-250)||(12951421-12951587)
chr5 (28-193)||(17644800-17644965)
chr5 (84-250)||(12937258-12937424)
chr5 (21-193)||(16931098-16931269)
chr5 (28-193)||(12936325-12936490)
chr5 (28-193)||(12950480-12950645)
chr5 (123-448)||(27808719-27809040)
chr5 (103-252)||(8214119-8214268)
chr5 (31-193)||(16930280-16930441)
chr5 (28-193)||(22964734-22964899)
chr5 (100-215)||(22965579-22965694)
chr5 (21-175)||(2401586-2401740)
chr5 (315-424)||(2898883-2898992)
chr5 (311-442)||(8213924-8214055)
chr5 (313-440)||(12937062-12937191)
chr5 (313-440)||(12951225-12951354)
chr5 (123-252)||(21038895-21039024)
chr5 (84-252)||(2898881-2899049)
chr5 (335-448)||(18966627-18966740)
chr5 (28-189)||(42057399-42057545)
chr5 (363-448)||(2898702-2898787)
chr5 (312-442)||(21038701-21038831)
chr5 (339-448)||(28108721-28108830)
chr5 (315-431)||(12951421-12951537)
chr5 (362-442)||(16930459-16930539)
chr5 (84-193)||(8213562-8213671)
chr5 (315-431)||(12937258-12937374)
chr5 (315-431)||(21038897-21039013)
chr5 (325-448)||(41473297-41473418)
chr5 (315-424)||(17646470-17646580)
chr5 (315-424)||(42056587-42056696)
chr5 (121-189)||(27809603-27809671)
chr5 (134-250)||(42056765-42056881)
chr5 (134-248)||(17646288-17646402)
chr5 (134-216)||(18966641-18966723)
chr5 (116-190)||(39940089-39940163)
chr5 (350-431)||(22965579-22965660)
chr5 (325-442)||(30463501-30463617)
chr5 (123-193)||(28109398-28109468)
chr5 (28-89)||(39940028-39940089)
chr5 (141-250)||(12937078-12937189)
chr5 (141-250)||(12951241-12951352)
chr5 (123-177)||(6807784-6807838)
chr5 (325-431)||(8214131-8214237)
chr5 (335-424)||(1818866-1818955)
chr5 (350-423)||(31064600-31064673)
chr5 (134-250)||(27808907-27809023)
chr5 (315-389)||(27808767-27808841)
chr5 (141-250)||(8213942-8214051)
chr5 (129-190)||(10284102-10284163)
chr5 (142-250)||(21038720-21038828)
chr5 (21-72)||(2899032-2899083)
chr5 (28-71)||(12937408-12937451)
chr5 (213-252)||(22965170-22965209)
chr5 (377-431)||(2898125-2898179)
chr5 (134-216)||(28108731-28108813)
chr5 (123-157)||(30471297-30471331)
chr5 (123-193)||(31064526-31064596)
chr5 (377-431)||(42057400-42057454)
[»] chr1 (32 HSPs)
chr1 (58-448)||(34815264-34815654)
chr1 (84-442)||(51936202-51936563)
chr1 (29-448)||(7998253-7998675)
chr1 (28-192)||(51935458-51935622)
chr1 (123-445)||(47356388-47356711)
chr1 (28-193)||(34814547-34814715)
chr1 (315-431)||(34815462-34815578)
chr1 (141-253)||(48899699-48899811)
chr1 (125-252)||(45423083-45423210)
chr1 (325-431)||(51936407-51936513)
chr1 (134-250)||(51936213-51936329)
chr1 (123-193)||(7999218-7999288)
chr1 (134-250)||(7998542-7998658)
chr1 (134-250)||(34815281-34815397)
chr1 (325-423)||(47356407-47356505)
chr1 (315-424)||(7998365-7998473)
chr1 (141-250)||(47356581-47356690)
chr1 (331-431)||(6131689-6131790)
chr1 (331-424)||(45423101-45423194)
chr1 (325-424)||(48899712-48899811)
chr1 (123-193)||(47357295-47357365)
chr1 (200-253)||(48899549-48899602)
chr1 (362-448)||(6131404-6131489)
chr1 (123-193)||(48899035-48899105)
chr1 (378-431)||(45423057-45423110)
chr1 (325-369)||(48899562-48899606)
chr1 (372-431)||(5865849-5865908)
chr1 (367-442)||(34089655-34089729)
chr1 (29-109)||(45423238-45423315)
chr1 (117-158)||(6131672-6131713)
chr1 (399-431)||(25484269-25484301)
chr1 (379-431)||(34089748-34089800)
[»] scaffold0004 (6 HSPs)
scaffold0004 (84-448)||(127299-127666)
scaffold0004 (315-431)||(127349-127465)
scaffold0004 (134-250)||(127533-127649)
scaffold0004 (23-86)||(130486-130549)
scaffold0004 (21-75)||(127265-127319)
scaffold0004 (362-424)||(128232-128293)
[»] chr4 (55 HSPs)
chr4 (65-442)||(38193455-38193832)
chr4 (84-448)||(35142935-35143289)
chr4 (77-448)||(50910998-50911381)
chr4 (58-252)||(11015314-11015507)
chr4 (112-448)||(52073618-52073949)
chr4 (84-252)||(40732249-40732417)
chr4 (17-193)||(9617266-9617442)
chr4 (28-193)||(11014368-11014533)
chr4 (123-442)||(31433376-31433698)
chr4 (311-448)||(40732050-40732187)
chr4 (311-448)||(9618016-9618153)
chr4 (84-252)||(9618217-9618381)
chr4 (311-448)||(11015109-11015246)
chr4 (28-193)||(35143861-35144026)
chr4 (315-442)||(33437255-33437382)
chr4 (84-193)||(50910317-50910426)
chr4 (83-193)||(38194414-38194524)
chr4 (84-191)||(40731374-40731481)
chr4 (123-252)||(33437450-33437579)
chr4 (325-431)||(33437462-33437568)
chr4 (333-431)||(40732269-40732367)
chr4 (315-431)||(35142985-35143101)
chr4 (315-431)||(50911208-50911324)
chr4 (21-162)||(52074519-52074661)
chr4 (331-431)||(33437688-33437787)
chr4 (123-223)||(33437699-33437798)
chr4 (134-250)||(40732067-40732183)
chr4 (134-250)||(52073816-52073932)
chr4 (58-136)||(55686175-55686253)
chr4 (134-247)||(11015126-11015239)
chr4 (315-424)||(11015316-11015424)
chr4 (134-247)||(38193708-38193821)
chr4 (134-250)||(9618033-9618149)
chr4 (118-193)||(33436298-33436373)
chr4 (134-250)||(35143160-35143272)
chr4 (334-431)||(38193524-38193622)
chr4 (377-430)||(2266449-2266502)
chr4 (315-423)||(31433571-31433679)
chr4 (142-250)||(33437274-33437382)
chr4 (352-431)||(9618252-9618331)
chr4 (123-193)||(31432747-31432817)
chr4 (349-403)||(35218736-35218790)
chr4 (335-424)||(42577392-42577481)
chr4 (123-188)||(46641466-46641531)
chr4 (134-250)||(31433387-31433503)
chr4 (372-428)||(51781962-51782018)
chr4 (325-428)||(52073643-52073746)
chr4 (122-160)||(35218390-35218428)
chr4 (21-75)||(38194503-38194557)
chr4 (371-423)||(46641460-46641512)
chr4 (386-444)||(29899014-29899072)
chr4 (378-448)||(35218385-35218455)
chr4 (28-72)||(9618364-9618408)
chr4 (23-75)||(35142903-35142955)
chr4 (23-75)||(40732397-40732449)
[»] chr3 (30 HSPs)
chr3 (123-448)||(17074288-17074614)
chr3 (86-253)||(48097941-48098108)
chr3 (29-252)||(45266290-45266513)
chr3 (86-252)||(54922368-54922534)
chr3 (23-193)||(47641028-47641198)
chr3 (312-448)||(47641766-47641902)
chr3 (28-193)||(48097409-48097574)
chr3 (311-448)||(54922172-54922309)
chr3 (104-216)||(47642611-47642723)
chr3 (86-193)||(54921499-54921608)
chr3 (103-193)||(45265583-45265673)
chr3 (315-431)||(17074487-17074603)
chr3 (315-431)||(48097944-48098060)
chr3 (378-448)||(45266247-45266317)
chr3 (325-431)||(54922380-54922486)
chr3 (331-431)||(45266308-45266408)
chr3 (141-250)||(17074312-17074421)
chr3 (141-250)||(47641790-47641899)
chr3 (141-250)||(54922196-54922305)
chr3 (209-252)||(47641970-47642013)
chr3 (385-423)||(37525677-37525715)
chr3 (349-431)||(47642611-47642693)
chr3 (17-75)||(48098090-48098148)
chr3 (377-442)||(26267918-26267983)
chr3 (137-216)||(2500903-2500982)
chr3 (361-431)||(47641139-47641207)
chr3 (377-431)||(45265614-45265668)
chr3 (377-423)||(46507948-46507994)
chr3 (373-423)||(48097523-48097573)
chr3 (377-431)||(54921549-54921603)
[»] chr8 (36 HSPs)
chr8 (87-448)||(27641628-27641995)
chr8 (28-252)||(42000676-42000900)
chr8 (86-238)||(2809045-2809197)
chr8 (315-442)||(21543353-21543480)
chr8 (311-448)||(42000964-42001101)
chr8 (28-192)||(42001672-42001836)
chr8 (334-448)||(8815752-8815866)
chr8 (338-442)||(28427715-28427819)
chr8 (331-447)||(24536761-24536877)
chr8 (331-431)||(2809049-2809149)
chr8 (315-431)||(27641675-27641791)
chr8 (123-190)||(8816429-8816496)
chr8 (364-447)||(24536338-24536421)
chr8 (84-190)||(40678137-40678243)
chr8 (325-424)||(42000789-42000888)
chr8 (123-193)||(21544268-21544338)
chr8 (123-193)||(21544527-21544597)
chr8 (134-216)||(28427726-28427808)
chr8 (378-448)||(33638882-33638952)
chr8 (134-251)||(21543352-21543469)
chr8 (142-250)||(42000968-42001076)
chr8 (123-193)||(14109735-14109805)
chr8 (123-193)||(21544009-21544079)
chr8 (349-427)||(41396711-41396789)
chr8 (373-428)||(40862193-40862248)
chr8 (141-250)||(8815733-8815842)
chr8 (141-250)||(27641862-27641971)
chr8 (141-193)||(14112875-14112927)
chr8 (377-424)||(14112880-14112927)
chr8 (21-75)||(2809179-2809233)
chr8 (362-424)||(28427086-28427147)
chr8 (378-424)||(28991650-28991696)
chr8 (22-75)||(27641592-27641645)
chr8 (382-447)||(28296283-28296348)
chr8 (378-431)||(28991999-28992052)
chr8 (371-411)||(28428114-28428154)
[»] chr7 (30 HSPs)
chr7 (111-442)||(25694190-25694524)
chr7 (84-248)||(48556705-48556869)
chr7 (311-442)||(31602071-31602202)
chr7 (311-448)||(48556500-48556637)
chr7 (147-447)||(47610161-47610465)
chr7 (84-193)||(14815451-14815560)
chr7 (84-193)||(15262446-15262555)
chr7 (315-448)||(22929276-22929409)
chr7 (333-418)||(47610161-47610246)
chr7 (86-193)||(31602782-31602890)
chr7 (317-431)||(48556705-48556819)
chr7 (350-423)||(6038038-6038111)
chr7 (134-250)||(47610333-47610449)
chr7 (134-250)||(31602075-31602191)
chr7 (134-250)||(48556517-48556633)
chr7 (335-433)||(23939039-23939137)
chr7 (102-176)||(25695044-25695118)
chr7 (331-424)||(25694220-25694313)
chr7 (134-250)||(25694397-25694513)
chr7 (340-424)||(35248754-35248838)
chr7 (123-190)||(22929024-22929091)
chr7 (28-90)||(25694126-25694188)
chr7 (21-71)||(31602876-31602926)
chr7 (123-216)||(35248736-35248829)
chr7 (405-448)||(25709175-25709218)
chr7 (377-423)||(25609553-25609599)
chr7 (142-215)||(6038038-6038111)
chr7 (143-252)||(22929302-22929411)
chr7 (123-190)||(47611034-47611094)
chr7 (386-430)||(35248846-35248890)
[»] scaffold0515 (1 HSPs)
scaffold0515 (123-162)||(10784-10823)
[»] scaffold0152 (1 HSPs)
scaffold0152 (123-162)||(18353-18392)
[»] scaffold0021 (4 HSPs)
scaffold0021 (123-162)||(50152-50191)
scaffold0021 (123-162)||(95683-95722)
scaffold0021 (129-162)||(39147-39180)
scaffold0021 (129-162)||(49085-49118)
[»] scaffold0113 (2 HSPs)
scaffold0113 (357-422)||(47160-47225)
scaffold0113 (362-423)||(47448-47508)
[»] scaffold0055 (7 HSPs)
scaffold0055 (129-162)||(19892-19925)
scaffold0055 (129-162)||(34290-34323)
scaffold0055 (129-162)||(35414-35447)
scaffold0055 (129-162)||(43094-43127)
scaffold0055 (129-162)||(53462-53495)
scaffold0055 (129-162)||(55808-55841)
scaffold0055 (129-162)||(74480-74513)
[»] scaffold0052 (5 HSPs)
scaffold0052 (129-162)||(3774-3807)
scaffold0052 (129-162)||(18299-18332)
scaffold0052 (129-162)||(30205-30238)
scaffold0052 (129-162)||(41790-41823)
scaffold0052 (129-162)||(53414-53447)


Alignment Details
Target: chr6 (Bit Score: 282; Significance: 1e-158; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 17 - 448
Target Start/End: Complemental strand, 22019635 - 22019206
Alignment:
Q  17 acctccagcgttagttaactgtctctggcatataagccgacagttaactgccgctggctcctccagaggcagttaactcccgctggctttgctacttttt 116  Q
    |||||||||| |||||||||  |||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  22019635 acctccagcgctagttaactacctctggcatataagtcgacagttaactaccgctggctcctctagaggcagttaactcccgctggctttggtacttttt 22019536  T
Q  117 attataattttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccataaaagtacatataga 216  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  22019535 attataattttacgcgtttcggtagaaaaatcaaaataaatagaaagttattcagaattctacgaaactttacagacgcctccataaaagtacatataga 22019436  T
Q  217 tgatgtgaatagtttcttaacattccgaataagtctt-attttannnnnnnccgaccgaaacgcacaaaatcgcaattgnnnnnnnnnnnnnntccgaca 315  Q
    ||||||||| |||||||||||||| |||||||||||| |||||        |||||||||||||| |||||||||||||                |||||    
T  22019435 tgatgtgaaaagtttcttaacatttcgaataagtcttgatttt---tttttccgaccgaaacgcagaaaatcgcaattgaaaaataaaaaaaaatcgaca 22019339  T
Q  316 cttattcaaaatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttattt 415  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  22019338 cttattcaaaatgttacgaaactttgcacatcatctatatgtatttatatagaggtgtctataaagtttcgtagcatttcgactaagtctcgatttattt 22019239  T
Q  416 tgatttttcaaccgaactatgcaaaattgcaat 448  Q
    ||||||||| |||||| ||||||||||||||||    
T  22019238 tgatttttcgaccgaattatgcaaaattgcaat 22019206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 22 - 186
Target Start/End: Original strand, 22018484 - 22018648
Alignment:
Q  22 cagcgttagttaactgtctctggcatataagccgacagttaactgccgctggctcctccagaggcagttaactcccgctggctttgctactttttattat 121  Q
    ||||| |||||||||| ||||| |||||  |||| |||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||    
T  22018484 cagcggtagttaactgcctctgacatatgcgccggcagttaactgccgctggctcctccagaggcagttaactgccgctggctttgatgctttttattat 22018583  T
Q  122 aattttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactt 186  Q
     ||||||||||||||||| |||||||||| ||||||||||| |||||||||||||||| ||||||    
T  22018584 gattttacgcgtttcggtcgaaaaatcaacataaatcgaaacttattcagaattctacgaaactt 22018648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 311 - 448
Target Start/End: Complemental strand, 4222567 - 4222432
Alignment:
Q  311 cgacacttattcaaaatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatt 410  Q
    ||||||||||||  ||||| | |||||||||||||||||  |||||||||| ||||||||| |||||||||||| ||| |||||||||||||||||||||    
T  4222567 cgacacttattcggaatgttaagaaactttgcacatcat--atatgtatttttatagaggtgtctataaagttttgtaccatttcgactaagtctcgatt 4222470  T
Q  411 tattttgatttttcaaccgaactatgcaaaattgcaat 448  Q
    |||||||||||||| ||||||| ||||||||| |||||    
T  4222469 tattttgatttttcgaccgaaccatgcaaaatcgcaat 4222432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 312 - 442
Target Start/End: Original strand, 12776394 - 12776524
Alignment:
Q  312 gacacttattcaaaatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgattt 411  Q
    |||||||||||  ||||| |||||||||||||||||||||||||||| || ||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  12776394 gacacttattcggaatgttacgaaactttgcacatcatctatatgtacttttatagaggtgtctataaagtttcttagcatttcgactaagtctcgattt 12776493  T
Q  412 attttgatttttcaaccgaactatgcaaaat 442  Q
    ||||   |||||| ||||||| |||||||||    
T  12776494 atttatttttttcgaccgaaccatgcaaaat 12776524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 311 - 448
Target Start/End: Original strand, 9903819 - 9903956
Alignment:
Q  311 cgacacttattcaaaatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatt 410  Q
    ||||||||||||  ||| | ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||  |||| |||||| ||||||||    
T  9903819 cgacacttattcggaatattacgaaactttgcacatcatctatatgtatttttatagaggtgtctataaagtttcgtaatattttgactaaatctcgatt 9903918  T
Q  411 tattttgatttttcaaccgaactatgcaaaattgcaat 448  Q
    |||||||||||||| |||| || ||||||||| |||||    
T  9903919 tattttgatttttcgaccgtaccatgcaaaatcgcaat 9903956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 312 - 442
Target Start/End: Original strand, 33202617 - 33202747
Alignment:
Q  312 gacacttattcaaaatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgattt 411  Q
    |||||||||||| ||||| ||||||||||| ||||||||||||||||||| ||||||||| || ||||| ||||||| ||| | ||||||||||||||||    
T  33202617 gacacttattcagaatgttacgaaactttgaacatcatctatatgtatttttatagaggtgtcaataaaatttcgtatcatgttgactaagtctcgattt 33202716  T
Q  412 attttgatttttcaaccgaactatgcaaaat 442  Q
    |||||||||||||  |||||| |||||||||    
T  33202717 attttgatttttcgtccgaaccatgcaaaat 33202747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 123 - 252
Target Start/End: Original strand, 12776252 - 12776381
Alignment:
Q  123 attttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccataaaagtacatatagatgatgt 222  Q
    ||||||| ||||| | | |||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||| |||||| ||||||||||||||||    
T  12776252 attttacacgttttgatcgaaaaatcaaaataaatcgaaatttattcagaattctacaaaattttacagacacctctataaaaatacatatagatgatgt 12776351  T
Q  223 gaatagtttcttaacattccgaataagtct 252  Q
    ||| |||||  ||||||||| |||||||||    
T  12776352 gaaaagttttgtaacattccaaataagtct 12776381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 125 - 252
Target Start/End: Complemental strand, 26839147 - 26839020
Alignment:
Q  125 tttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccataaaagtacatatagatgatgtga 224  Q
    ||||||||||||| | ||||||||||||||||||||||   |||||||||| ||| ||||||||||||| |||| |||||| ||||||||||||||||||    
T  26839147 tttacgcgtttcgttcgaaaaatcaaaataaatcgaaacccattcagaattatacgaaactttacagacacctctataaaaatacatatagatgatgtga 26839048  T
Q  225 atagtttcttaacattccgaataagtct 252  Q
    | |||||| ||||||| | |||||||||    
T  26839047 aaagtttcgtaacatttcaaataagtct 26839020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 87 - 193
Target Start/End: Complemental strand, 9904631 - 9904525
Alignment:
Q  87 agttaactcccgctggctttgctactttttattataattttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactt 186  Q
    |||||||| || ||| ||||||| ||||||||| | ||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||| ||||||    
T  9904631 agttaactgcctctgactttgctgctttttattgtgattttacgcgtttcggtcgaaaaatcaaaataaatcgaaacatattcagaattctacgaaactt 9904532  T
Q  187 tacagac 193  Q
    |||||||    
T  9904531 tacagac 9904525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 123 - 193
Target Start/End: Original strand, 4221799 - 4221869
Alignment:
Q  123 attttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagac 193  Q
    ||||||||||||||| | |||||||||||||||||||||| |||||||||||||||| |||||||||||||    
T  4221799 attttacgcgtttcgatcgaaaaatcaaaataaatcgaaacttattcagaattctacgaaactttacagac 4221869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 123 - 205
Target Start/End: Complemental strand, 4222654 - 4222572
Alignment:
Q  123 attttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccataaaa 205  Q
    ||||||| ||||||||| |||||||||||||||||||||| |||||||||||||||  ||||||||||||| |||| ||||||    
T  4222654 attttacacgtttcggtcgaaaaatcaaaataaatcgaaacttattcagaattctatgaaactttacagacacctctataaaa 4222572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 136 - 250
Target Start/End: Complemental strand, 9903937 - 9903823
Alignment:
Q  136 cggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccataaaagtacatatagatgatgtgaatagtttctta 235  Q
    |||| |||||||||||||||||||| | ||| ||| |||  ||| |||||||| |||| |||| |||||| ||||||||||||||||| | |||||| ||    
T  9903937 cggtcgaaaaatcaaaataaatcgagatttagtcaaaatattacgaaactttatagacacctctataaaaatacatatagatgatgtgcaaagtttcgta 9903838  T
Q  236 acattccgaataagt 250  Q
    | |||||||||||||    
T  9903837 atattccgaataagt 9903823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 134 - 250
Target Start/End: Original strand, 4222449 - 4222563
Alignment:
Q  134 ttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccataaaagtacatatagatgatgtgaatagtttct 233  Q
    |||||| |||||||||||||||||||| | ||| ||  |||  |||||||||||| |||| |||| |||||| ||||||||  ||||||| | |||||||    
T  4222449 ttcggtcgaaaaatcaaaataaatcgagacttagtcgaaatggtacaaaactttatagacacctctataaaaatacatata--tgatgtgcaaagtttct 4222546  T
Q  234 taacattccgaataagt 250  Q
    |||||||||||||||||    
T  4222547 taacattccgaataagt 4222563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 315 - 424
Target Start/End: Original strand, 26839022 - 26839131
Alignment:
Q  315 acttattcaaaatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttatt 414  Q
    |||||||  |||||| |||||||||| |||||||||||||||||||| ||||||||| ||| ||||||||||||  |||  || |  || ||||||||||    
T  26839022 acttatttgaaatgttacgaaacttttcacatcatctatatgtatttttatagaggtgtctgtaaagtttcgtataattctgaatgggtttcgatttatt 26839121  T
Q  415 ttgatttttc 424  Q
    ||||||||||    
T  26839122 ttgatttttc 26839131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 123 - 251
Target Start/End: Original strand, 33202424 - 33202552
Alignment:
Q  123 attttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccataaaagtacatatagatgatgt 222  Q
    |||||||||| |||||| |||||||||||||||||||||    |||||||||| ||| ||| |||| |||| |||| |||||| || || |||||||| |    
T  33202424 attttacgcgcttcggtcgaaaaatcaaaataaatcgaaccgaattcagaattgtacgaaaatttatagacacctctataaaaatatatttagatgatat 33202523  T
Q  223 gaatagtttcttaacattccgaataagtc 251  Q
    | | |||||| |||| |||||||||||||    
T  33202524 gcaaagtttcgtaactttccgaataagtc 33202552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 123 - 193
Target Start/End: Original strand, 26838014 - 26838084
Alignment:
Q  123 attttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagac 193  Q
    ||||||||||||||||| |||| ||||||||||||||||| ||||||| |||||| | |||||||||||||    
T  26838014 attttacgcgtttcggtcgaaatatcaaaataaatcgaaacttattcataattctgcgaaactttacagac 26838084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 363 - 442
Target Start/End: Complemental strand, 26838714 - 26838633
Alignment:
Q  363 tatagaggtatctataaagtttcgtagcatttcga--ctaagtctcgatttattttgatttttcaaccgaactatgcaaaat 442  Q
    ||||||||| ||||||||||||||||| |||||||  || |||||||||||||||||||||||| ||| ||| |||||||||    
T  26838714 tatagaggtgtctataaagtttcgtaggatttcgagactgagtctcgatttattttgatttttcgaccaaaccatgcaaaat 26838633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 181 - 250
Target Start/End: Complemental strand, 12776466 - 12776397
Alignment:
Q  181 aaactttacagacgcctccataaaagtacatatagatgatgtgaatagtttcttaacattccgaataagt 250  Q
    |||||||| |||| |||| |||||||||||||||||||||||| | |||||| |||||||||||||||||    
T  12776466 aaactttatagacacctctataaaagtacatatagatgatgtgcaaagtttcgtaacattccgaataagt 12776397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 134 - 250
Target Start/End: Original strand, 22019223 - 22019339
Alignment:
Q  134 ttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccataaaagtacatatagatgatgtgaatagtttct 233  Q
    |||||| |||||||||||||||||||| | ||| ||  ||| |||| |||||||| |||| |||| ||| || ||||||||||||||||| | ||||||     
T  22019223 ttcggtcgaaaaatcaaaataaatcgagacttagtcgaaatgctacgaaactttatagacacctctatataaatacatatagatgatgtgcaaagtttcg 22019322  T
Q  234 taacattccgaataagt 250  Q
    |||||||  ||||||||    
T  22019323 taacattttgaataagt 22019339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 315 - 431
Target Start/End: Original strand, 22019402 - 22019518
Alignment:
Q  315 acttattcaaaatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttatt 414  Q
    |||||||| |||||| | |||||||| ||||||||||||||||| || ||| ||||  ||| ||||||||||||| |||  || ||| | || |||||||    
T  22019402 acttattcgaaatgttaagaaacttttcacatcatctatatgtacttttatggaggcgtctgtaaagtttcgtagaattctgaataactttctatttatt 22019501  T
Q  415 ttgatttttcaaccgaa 431  Q
    |||||||||| ||||||    
T  22019502 ttgatttttctaccgaa 22019518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 325 - 424
Target Start/End: Complemental strand, 12776369 - 12776270
Alignment:
Q  325 aatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttattttgatttttc 424  Q
    ||||| || ||||||| |||||||||||||||||||| ||||||||| ||| |||| ||| |||| |||  || ||| | ||||||||||||||||||||    
T  12776369 aatgttacaaaacttttcacatcatctatatgtatttttatagaggtgtctgtaaaattttgtagaattctgaataaatttcgatttattttgatttttc 12776270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 112 - 178
Target Start/End: Original strand, 9903636 - 9903702
Alignment:
Q  112 tttttattataattttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattcta 178  Q
    |||||||||| ||||||||||||||||| ||||||| ||||||||||||| |||||| | |||||||    
T  9903636 tttttattatgattttacgcgtttcggtcgaaaaattaaaataaatcgaatgttatttaaaattcta 9903702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 123 - 193
Target Start/End: Complemental strand, 33203362 - 33203292
Alignment:
Q  123 attttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagac 193  Q
    |||||| |||||||| | ||||||| |||||||||||||| ||||||| |||||||| |||||||||||||    
T  33203362 attttatgcgtttcgttcgaaaaataaaaataaatcgaaacttattcaaaattctacgaaactttacagac 33203292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 442
Target Start/End: Original strand, 31373179 - 31373243
Alignment:
Q  378 aaagtttcgtagcatttcgactaagtctcgatttattttgatttttcaaccgaactatgcaaaat 442  Q
    ||||||||||||||||| || |  ||||| ||||||||||||||||||||| || ||||||||||    
T  31373179 aaagtttcgtagcattttgattttgtctcaatttattttgatttttcaaccaaaatatgcaaaat 31373243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 331 - 431
Target Start/End: Complemental strand, 33202535 - 33202435
Alignment:
Q  331 acgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttattttgatttttcaaccga 430  Q
    ||||||||||||| |||||||| || ||||| ||||||||| |||||||| |||||||  |||  || |  |  |||||||||||||||||||| |||||    
T  33202535 acgaaactttgcatatcatctaaatatatttttatagaggtgtctataaattttcgtacaattctgaattcggttcgatttattttgatttttcgaccga 33202436  T
Q  431 a 431  Q
    |    
T  33202435 a 33202435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 33202729 - 33202620
Alignment:
Q  141 gaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccataaaagtacatatagatgatgtgaatagtttcttaacatt 240  Q
    |||||||||||||||||||| | ||| |||  ||  ||| ||| ||||  ||| |||| |||||| ||||||||||||||||  | |||||| |||||||    
T  33202729 gaaaaatcaaaataaatcgagacttagtcaacatgatacgaaattttattgacacctctataaaaatacatatagatgatgttcaaagtttcgtaacatt 33202630  T
Q  241 ccgaataagt 250  Q
    | ||||||||    
T  33202629 ctgaataagt 33202620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 363 - 431
Target Start/End: Original strand, 4222575 - 4222643
Alignment:
Q  363 tatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttattttgatttttcaaccgaa 431  Q
    ||||||||| ||| ||||||||| ||| |||  || ||||| |||||||||||||||||||| ||||||    
T  4222575 tatagaggtgtctgtaaagtttcatagaattctgaataagtttcgatttattttgatttttcgaccgaa 4222643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 311 - 359
Target Start/End: Complemental strand, 26838962 - 26838914
Alignment:
Q  311 cgacacttattcaaaatgtcacgaaactttgcacatcatctatatgtat 359  Q
    |||||||||||  |||||| ||||||||||||||||||||||| |||||    
T  26838962 cgacacttatttgaaatgttacgaaactttgcacatcatctatgtgtat 26838914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 431
Target Start/End: Complemental strand, 11797166 - 11797113
Alignment:
Q  378 aaagtttcgtagcatttcgactaagtctcgatttattttgatttttcaaccgaa 431  Q
    |||||||  ||||||||| | || ||||||||||||||| ||||||||||||||    
T  11797166 aaagtttgatagcatttcaaatatgtctcgatttatttttatttttcaaccgaa 11797113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 282; Significance: 1e-158; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 17 - 448
Target Start/End: Complemental strand, 44329743 - 44329314
Alignment:
Q  17 acctccagcgttagttaactgtctctggcatataagccgacagttaactgccgctggctcctccagaggcagttaactcccgctggctttgctacttttt 116  Q
    |||||||||| |||||||||  |||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  44329743 acctccagcgctagttaactacctctggcatataagtcgacagttaactaccgctggctcctctagaggcagttaactcccgctggctttggtacttttt 44329644  T
Q  117 attataattttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccataaaagtacatataga 216  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  44329643 attataattttacgcgtttcggtagaaaaatcaaaataaatagaaagttattcagaattctacgaaactttacagacgcctccataaaagtacatataga 44329544  T
Q  217 tgatgtgaatagtttcttaacattccgaataagtctt-attttannnnnnnccgaccgaaacgcacaaaatcgcaattgnnnnnnnnnnnnnntccgaca 315  Q
    ||||||||| |||||||||||||| |||||||||||| |||||        |||||||||||||| |||||||||||||                |||||    
T  44329543 tgatgtgaaaagtttcttaacatttcgaataagtcttgatttt---tttttccgaccgaaacgcagaaaatcgcaattgaaaaataaaaaaaaatcgaca 44329447  T
Q  316 cttattcaaaatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttattt 415  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  44329446 cttattcaaaatgttacgaaactttgcacatcatctatatgtatttatatagaggtgtctataaagtttcgtagcatttcgactaagtctcgatttattt 44329347  T
Q  416 tgatttttcaaccgaactatgcaaaattgcaat 448  Q
    ||||||||| |||||| ||||||||||||||||    
T  44329346 tgatttttcgaccgaattatgcaaaattgcaat 44329314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 17 - 448
Target Start/End: Original strand, 31297697 - 31298131
Alignment:
Q  17 acctccagcgttagttaactgtctctggcatataagccgacagttaactgccgctggctcctccagaggcagttaactcccgctggctttgctacttttt 116  Q
    ||||||| || |||||||||||| |||||||||  |||| |||||||||||||||||||||||||||||||||||||| ||||| | |||||| ||||||    
T  31297697 acctccaacggtagttaactgtc-ctggcatatgcgccggcagttaactgccgctggctcctccagaggcagttaactgccgcttggtttgctgcttttt 31297795  T
Q  117 attataattttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccataaaagtacatataga 216  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| |||| |||||| ||||||||||    
T  31297796 attatgattttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacgatactttacagacacctctataaaaatacatataga 31297895  T
Q  217 tgatgtgaatagtttcttaacattccgaataagtc----ttattttannnnnnnccgaccgaaacgcacaaaatcgcaattgnnnnnnnnnnnnnntccg 312  Q
    ||||||||| |||||| ||||||||||||||||||    || || |         |||||||||||| ||||||||||||||                 |    
T  31297896 tgatgtgaaaagtttcgtaacattccgaataagtctcgatttttgtttattttttcgaccgaaacgcgcaaaatcgcaattgaaaaaataaaaaacattg 31297995  T
Q  313 acacttattcaaaatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgattta 412  Q
    | ||||||||  ||||  |||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||||||||||    
T  31297996 aaacttattcggaatgatacgaaacttttcacatcatctatatgtatttatatagaggtgtctctaaagtttcgtagcattttgactaagtctcgattta 31298095  T
Q  413 ttttgatttttcaaccgaactatgcaaaattgcaat 448  Q
    ||||||| |||| |||||||  |||||||| |||||    
T  31298096 ttttgatatttcgaccgaaccgtgcaaaatcgcaat 31298131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 77 - 398
Target Start/End: Complemental strand, 36584423 - 36584104
Alignment:
Q  77 ctccagaggcagttaactcccgctggctttgctactttttattataattttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattc 176  Q
    |||||||||||||||||| ||  |||||||||| |||| |||||| ||||||||||||||| | |||||||||||| |||||||||||||||||||||||    
T  36584423 ctccagaggcagttaactgcct-tggctttgctgctttatattatgattttacgcgtttcgatcgaaaaatcaaaacaaatcgaaagttattcagaattc 36584325  T
Q  177 tacaaaactttacagacgcctccataaaagtacatatagatgatgtgaatagtttcttaacattccgaataagtcttattttannnnnnnccgaccgaaa 276  Q
    ||| ||||||||||||| |||| |||||| ||||||||||||||||||| | |||  ||||||||||||||||| |   |||        ||||||||||    
T  36584324 tacgaaactttacagacacctctataaaaatacatatagatgatgtgaaaaattttgtaacattccgaataagtttcgatttttttttttccgaccgaaa 36584225  T
Q  277 cgcacaaaatcgcaattgnnnnnnnnnnnnnntccgacacttattcaaaatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatcta 376  Q
    ||| |||||| |||||||              | ||||||||||||  ||||| |||||||||||||||||||||||||||| || ||||||||| ||||    
T  36584224 cgcgcaaaattgcaattgaaaaaataaaaaaat-cgacacttattcggaatgttacgaaactttgcacatcatctatatgtacttttatagaggtgtcta 36584126  T
Q  377 taaagtttcgtagcatttcgac 398  Q
    | ||||||| || |||||||||    
T  36584125 ttaagtttcatatcatttcgac 36584104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 22 - 186
Target Start/End: Original strand, 44328592 - 44328756
Alignment:
Q  22 cagcgttagttaactgtctctggcatataagccgacagttaactgccgctggctcctccagaggcagttaactcccgctggctttgctactttttattat 121  Q
    ||||| |||||||||| ||||| |||||  |||| |||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||    
T  44328592 cagcggtagttaactgcctctgacatatgcgccggcagttaactgccgctggctcctccagaggcagttaactgccgctggctttgatgctttttattat 44328691  T
Q  122 aattttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactt 186  Q
     ||||||||||||||||| |||||||||| ||||||||||| |||||||||||||||| ||||||    
T  44328692 gattttacgcgtttcggtcgaaaaatcaacataaatcgaaacttattcagaattctacgaaactt 44328756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 312 - 442
Target Start/End: Complemental strand, 44656249 - 44656119
Alignment:
Q  312 gacacttattcaaaatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgattt 411  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  44656249 gacacttattcaaaatgttacgaaacttttcacatcatctatatgtatttatatagaggtgtcaataaagtttcgtagcatttcgactaagtctcgattt 44656150  T
Q  412 attttgatttttcaaccgaactatgcaaaat 442  Q
    ||| ||||||||| ||||||| |||||||||    
T  44656149 attatgatttttcgaccgaaccatgcaaaat 44656119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 313 - 448
Target Start/End: Complemental strand, 10601875 - 10601740
Alignment:
Q  313 acacttattcaaaatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgattta 412  Q
    ||||||||||  ||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  10601875 acacttattcggaatgttacgaaactttgaacatcatctatatgtatttatatagaggtgtctataaagtttcgtaacatttcgactaagtctcgattta 10601776  T
Q  413 ttttgatttttcaaccgaactatgcaaaattgcaat 448  Q
    |||||||||||| ||||||| ||||||||| |||||    
T  10601775 ttttgatttttcgaccgaaccatgcaaaatcgcaat 10601740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 103 - 252
Target Start/End: Complemental strand, 15630391 - 15630242
Alignment:
Q  103 ctttgctactttttattataattttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccata 202  Q
    |||||||  |||||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| |||    
T  15630391 ctttgctgttttttattatgattttacgcgtttcagttgaaaaatcaaaataaatcgaaagttattcagaattctacgaaactttacagacacctctata 15630292  T
Q  203 aaagtacatatagatgatgtgaatagtttcttaacattccgaataagtct 252  Q
    ||| ||||||||||||||||||| |||||| ||||||||  |||||||||    
T  15630291 aaaatacatatagatgatgtgaaaagtttcgtaacattctaaataagtct 15630242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 311 - 442
Target Start/End: Complemental strand, 15630180 - 15630049
Alignment:
Q  311 cgacacttattcaaaatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatt 410  Q
    ||||||||||||  ||||| |||||||||  |||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||    
T  15630180 cgacacttattcggaatgttacgaaacttctcacatcatctatatgtatttttatagaggtatctttaaagtttcgtagcattttgactaagtctcgatt 15630081  T
Q  411 tattttgatttttcaaccgaactatgcaaaat 442  Q
    |||||||||||||||||||||| |||||||||    
T  15630080 tattttgatttttcaaccgaaccatgcaaaat 15630049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 84 - 190
Target Start/End: Complemental strand, 44656519 - 44656413
Alignment:
Q  84 ggcagttaactcccgctggctttgctactttttattataattttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaa 183  Q
    ||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||    
T  44656519 ggcagttaactgccgctggctttgctgctttttattatgattttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcataattctacgaaa 44656420  T
Q  184 ctttaca 190  Q
    |||||||    
T  44656419 ctttaca 44656413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 331 - 448
Target Start/End: Complemental strand, 6172951 - 6172834
Alignment:
Q  331 acgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttattttgatttttcaaccga 430  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||  |||||    
T  6172951 acgaaactttgcacatcatcaatatgtatttatatagaggtgtctataaagtttcgtagtatttcgactaagtctcgatttattttgattttttgaccga 6172852  T
Q  431 actatgcaaaattgcaat 448  Q
    || || |||||| |||||    
T  6172851 accatacaaaatcgcaat 6172834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 19 - 188
Target Start/End: Original strand, 15629333 - 15629491
Alignment:
Q  19 ctccagcgttagttaactgtctctggcatataagccgacagttaactgccgctggctcctccagaggcagttaactcccgctggctttgctactttttat 118  Q
    |||||||| |||||||||| |||||||||||   ||||||||||||||||||||||||||||||||||||||           |||||||| ||||||||    
T  15629333 ctccagcgatagttaactgcctctggcatatgcaccgacagttaactgccgctggctcctccagaggcagtt-----------gctttgctgctttttat 15629421  T
Q  119 tataattttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaacttta 188  Q
    | ||||||| ||||||||||| ||||||| |||||||||||||| |||||||||||||||| ||||||||    
T  15629422 tgtaattttgcgcgtttcggtcgaaaaattaaaataaatcgaaacttattcagaattctacgaaacttta 15629491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 91 - 187
Target Start/End: Complemental strand, 6173038 - 6172942
Alignment:
Q  91 aactcccgctggctttgctactttttattataattttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaacttt 187  Q
    |||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  6173038 aactgccgctggctttgcttctttttattatgattttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacgaaacttt 6172942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 84 - 192
Target Start/End: Complemental strand, 31298802 - 31298694
Alignment:
Q  84 ggcagttaactcccgctggctttgctactttttattataattttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaa 183  Q
    ||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||    
T  31298802 ggcagttaactgccgctggctttgctgctttttattatgattttacgcgtttcggttgaaaaatcaaaataaatcgaaatttattcagaattctacgaaa 31298703  T
Q  184 ctttacaga 192  Q
    |||| ||||    
T  31298702 ctttgcaga 31298694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 86 - 190
Target Start/End: Original strand, 44655432 - 44655536
Alignment:
Q  86 cagttaactcccgctggctttgctactttttattataattttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaact 185  Q
    ||||||||| |||||| ||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||    
T  44655432 cagttaactgccgctgactttgctgctttttattatgattttacgcgtttcggtcgaaaaatcaaaataaatcgaaatttattcagaattctacgaaact 44655531  T
Q  186 ttaca 190  Q
    |||||    
T  44655532 ttaca 44655536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 86 - 193
Target Start/End: Original strand, 3259969 - 3260076
Alignment:
Q  86 cagttaactcccgctggctttgctactttttattataattttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaact 185  Q
    ||||||||| |||||||||||| | ||||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| |||||    
T  3259969 cagttaactgccgctggctttgttgctttttattatgattttacgcgtttcagtaggaaaatcaaaataaatcgaaagttattcagaattctacgaaact 3260068  T
Q  186 ttacagac 193  Q
    || |||||    
T  3260069 tttcagac 3260076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 149 - 252
Target Start/End: Complemental strand, 34414976 - 34414873
Alignment:
Q  149 aaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccataaaagtacatatagatgatgtgaatagtttcttaacattccgaataa 248  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| | || |||||| ||||||||||||||||||| |||||| |||||||||||||||    
T  34414976 aaaataaatcgaaagttattcagaattctacgaaactttacagacacgtctataaaaatacatatagatgatgtgaaaagtttcgtaacattccgaataa 34414877  T
Q  249 gtct 252  Q
    ||||    
T  34414876 gtct 34414873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 84 - 193
Target Start/End: Original strand, 31477 - 31586
Alignment:
Q  84 ggcagttaactcccgctggctttgctactttttattataattttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaa 183  Q
    ||||||||||| |||||||||| ||| ||||||||||||||||||||| ||| ||| |||||||||||||||||||||| ||||||| |||||||| |||    
T  31477 ggcagttaactgccgctggcttggctgctttttattataattttacgcattttggtcgaaaaatcaaaataaatcgaaacttattcaaaattctacgaaa 31576  T
Q  184 ctttacagac 193  Q
    ||||| ||||    
T  31577 ctttatagac 31586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 88 - 179
Target Start/End: Complemental strand, 3260182 - 3260091
Alignment:
Q  88 gttaactcccgctggctttgctactttttattataattttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctac 179  Q
    ||||||| |||||||||||||| ||||||||||| ||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  3260182 gttaactaccgctggctttgctgctttttattatgattttacacgtttcggtcgaaaaatcaaaataaatcgaaacttattcagaattctac 3260091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 315 - 427
Target Start/End: Original strand, 15630244 - 15630356
Alignment:
Q  315 acttattcaaaatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttatt 414  Q
    ||||||| | ||||| |||||||||| |||||||||||||||||||| ||||||||| ||| ||||||||||||| |||  || ||| | ||||||||||    
T  15630244 acttatttagaatgttacgaaacttttcacatcatctatatgtatttttatagaggtgtctgtaaagtttcgtagaattctgaataactttcgatttatt 15630343  T
Q  415 ttgatttttcaac 427  Q
    |||||||||||||    
T  15630344 ttgatttttcaac 15630356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 134 - 250
Target Start/End: Original strand, 15630060 - 15630176
Alignment:
Q  134 ttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccataaaagtacatatagatgatgtgaatagtttct 233  Q
    |||||| |||||||||||||||||||| | ||| ||| ||| |||| |||||||| |||  |||| |||||| ||||||||||||||||||  ||||||     
T  15630060 ttcggttgaaaaatcaaaataaatcgagacttagtcaaaatgctacgaaactttaaagatacctctataaaaatacatatagatgatgtgagaagtttcg 15630159  T
Q  234 taacattccgaataagt 250  Q
    |||||||||||||||||    
T  15630160 taacattccgaataagt 15630176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 315 - 431
Target Start/End: Complemental strand, 31297929 - 31297813
Alignment:
Q  315 acttattcaaaatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttatt 414  Q
    ||||||||  ||||| |||||||||| |||||||||||||||||||| ||||||||| ||| |||||| |||||| |||  || ||| | ||||||||||    
T  31297929 acttattcggaatgttacgaaacttttcacatcatctatatgtatttttatagaggtgtctgtaaagtatcgtagaattctgaataactttcgatttatt 31297830  T
Q  415 ttgatttttcaaccgaa 431  Q
    |||||||||| ||||||    
T  31297829 ttgatttttctaccgaa 31297813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 36583450 - 36583540
Alignment:
Q  103 ctttgctactttttattataattttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagac 193  Q
    ||||||| ||||||||| | ||||||||||||||| | ||||||| |||||||||||||| ||||| |||||||||| |||||||||||||    
T  36583450 ctttgctgctttttattgtgattttacgcgtttcgatcgaaaaataaaaataaatcgaaacttatttagaattctacgaaactttacagac 36583540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 134 - 250
Target Start/End: Complemental strand, 31298114 - 31297998
Alignment:
Q  134 ttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccataaaagtacatatagatgatgtgaatagtttct 233  Q
    |||||| |||| ||||||||||||||| | ||| ||| ||| |||| |||||||| |||| |||| ||| || ||||||||||||||||||| ||||||     
T  31298114 ttcggtcgaaatatcaaaataaatcgagacttagtcaaaatgctacgaaactttagagacacctctatataaatacatatagatgatgtgaaaagtttcg 31298015  T
Q  234 taacattccgaataagt 250  Q
    || ||||||||||||||    
T  31298014 tatcattccgaataagt 31297998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 315 - 416
Target Start/End: Original strand, 34414875 - 34414976
Alignment:
Q  315 acttattcaaaatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttatt 414  Q
    ||||||||  ||||| |||||||||| |||||||||||||||||||| |||||| || ||| ||||||||||||| |||  || ||| | ||||||||||    
T  34414875 acttattcggaatgttacgaaacttttcacatcatctatatgtatttttatagacgtgtctgtaaagtttcgtagaattctgaataactttcgatttatt 34414974  T
Q  415 tt 416  Q
    ||    
T  34414975 tt 34414976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 315 - 424
Target Start/End: Original strand, 36584251 - 36584360
Alignment:
Q  315 acttattcaaaatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttatt 414  Q
    ||||||||  ||||| || ||| ||| |||||||||||||||||||| ||||||||| ||| ||||||||||||| |||  || ||| | ||||||| ||    
T  36584251 acttattcggaatgttacaaaatttttcacatcatctatatgtatttttatagaggtgtctgtaaagtttcgtagaattctgaataactttcgatttgtt 36584350  T
Q  415 ttgatttttc 424  Q
    ||||||||||    
T  36584351 ttgatttttc 36584360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 134 - 250
Target Start/End: Original strand, 10601757 - 10601873
Alignment:
Q  134 ttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccataaaagtacatatagatgatgtgaatagtttct 233  Q
    |||||| |||||||||||||||||||| | ||| ||  |||  ||| |||||||| |||| |||| ||| || ||||||||||||||||  | ||||||     
T  10601757 ttcggtcgaaaaatcaaaataaatcgagacttagtcgaaatgttacgaaactttatagacacctctatataaatacatatagatgatgttcaaagtttcg 10601856  T
Q  234 taacattccgaataagt 250  Q
    |||||||||||||||||    
T  10601857 taacattccgaataagt 10601873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 134 - 250
Target Start/End: Original strand, 44329331 - 44329447
Alignment:
Q  134 ttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccataaaagtacatatagatgatgtgaatagtttct 233  Q
    |||||| |||||||||||||||||||| | ||| ||  ||| |||| |||||||| |||| |||| ||| || ||||||||||||||||| | ||||||     
T  44329331 ttcggtcgaaaaatcaaaataaatcgagacttagtcgaaatgctacgaaactttatagacacctctatataaatacatatagatgatgtgcaaagtttcg 44329430  T
Q  234 taacattccgaataagt 250  Q
    |||||||  ||||||||    
T  44329431 taacattttgaataagt 44329447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 315 - 431
Target Start/End: Original strand, 44329510 - 44329626
Alignment:
Q  315 acttattcaaaatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttatt 414  Q
    |||||||| |||||| | |||||||| ||||||||||||||||| || ||| ||||  ||| ||||||||||||| |||  || ||| | || |||||||    
T  44329510 acttattcgaaatgttaagaaacttttcacatcatctatatgtacttttatggaggcgtctgtaaagtttcgtagaattctgaataactttctatttatt 44329609  T
Q  415 ttgatttttcaaccgaa 431  Q
    |||||||||| ||||||    
T  44329610 ttgatttttctaccgaa 44329626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 172 - 252
Target Start/End: Complemental strand, 44656393 - 44656313
Alignment:
Q  172 aattctacaaaactttacagacgcctccataaaagtacatatagatgatgtgaatagtttcttaacattccgaataagtct 252  Q
    |||||||| ||||||||||  | |||| |||||| ||||||||||||||||| | |||||| |||||||||||||||||||    
T  44656393 aattctacgaaactttacaatcacctctataaaaatacatatagatgatgtgtaaagtttcgtaacattccgaataagtct 44656313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 195 - 252
Target Start/End: Complemental strand, 10602000 - 10601943
Alignment:
Q  195 cctccataaaagtacatatagatgatgtgaatagtttcttaacattccgaataagtct 252  Q
    |||| |||||| ||||||||||||||||||| |||||| |||||||||||||||||||    
T  10602000 cctctataaaaatacatatagatgatgtgaaaagtttcgtaacattccgaataagtct 10601943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 181 - 250
Target Start/End: Original strand, 36584118 - 36584187
Alignment:
Q  181 aaactttacagacgcctccataaaagtacatatagatgatgtgaatagtttcttaacattccgaataagt 250  Q
    |||||| | |||| |||| |||||||||||||||||||||||| | |||||| |||||||||||||||||    
T  36584118 aaacttaatagacacctctataaaagtacatatagatgatgtgcaaagtttcgtaacattccgaataagt 36584187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 134 - 250
Target Start/End: Original strand, 44656130 - 44656246
Alignment:
Q  134 ttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccataaaagtacatatagatgatgtgaatagtttct 233  Q
    |||||| ||||||||| |||||||||| | ||| ||  ||| |||| ||||||||  ||| |||| ||| || ||||||||||||||||||| ||||||     
T  44656130 ttcggtcgaaaaatcataataaatcgagacttagtcgaaatgctacgaaactttattgacacctctatataaatacatatagatgatgtgaaaagtttcg 44656229  T
Q  234 taacattccgaataagt 250  Q
    |||||||  ||||||||    
T  44656230 taacattttgaataagt 44656246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 151 - 198
Target Start/End: Complemental strand, 10602182 - 10602135
Alignment:
Q  151 aataaatcgaaagttattcagaattctacaaaactttacagacgcctc 198  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  10602182 aataaatcgaaagttattcagaattctacgaaactttacagacacctc 10602135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 335 - 457
Target Start/End: Original strand, 45275384 - 45275504
Alignment:
Q  335 aactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttattttgatttttcaaccgaacta 434  Q
    ||||||||||||| |||||  ||| || ||||||||| |||  | |||||||||||| |  ||||||||||| ||||||||||||||||  ||||||       
T  45275384 aactttgcacatcctctat--gtaattttatagaggtttctgcagagtttcgtagcaatcagactaagtctcaatttattttgattttttgaccgaatcg 45275481  T
Q  435 tgcaaaattgcaatattcttcga 457  Q
    |||||||||||||| || |||||    
T  45275482 tgcaaaattgcaatttttttcga 45275504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 21 - 75
Target Start/End: Original strand, 3259933 - 3259987
Alignment:
Q  21 ccagcgttagttaactgtctctggcatataagccgacagttaactgccgctggct 75  Q
    |||||| |||||||||| |||||||||||  ||||||||||||||||||||||||    
T  3259933 ccagcggtagttaactgcctctggcatatgcgccgacagttaactgccgctggct 3259987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 315 - 389
Target Start/End: Original strand, 44656315 - 44656389
Alignment:
Q  315 acttattcaaaatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtag 389  Q
    ||||||||  ||||| |||||||||| |||||||||||||||||||| |||||||||   | |||||||||||||    
T  44656315 acttattcggaatgttacgaaactttacacatcatctatatgtatttttatagaggtgattgtaaagtttcgtag 44656389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 351 - 424
Target Start/End: Complemental strand, 44703155 - 44703081
Alignment:
Q  351 tatatgtatttatatagaggtatctataaagttt-cgtagcatttcgactaagtctcgatttattttgatttttc 424  Q
    ||||||||||| ||||||||| | |||||||||| |||| ||||| || ||||| ||||||||||||||||||||    
T  44703155 tatatgtatttttatagaggtgtttataaagttttcgtaccattttgattaagtttcgatttattttgatttttc 44703081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 10601945 - 10602001
Alignment:
Q  315 acttattcaaaatgtcacgaaactttgcacatcatctatatgtatttatatagaggt 371  Q
    ||||||||  ||||| |||||||||| |||||||||||||||||||| |||||||||    
T  10601945 acttattcggaatgttacgaaacttttcacatcatctatatgtatttttatagaggt 10602001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 44655395 - 44655447
Alignment:
Q  20 tccagcgttagttaactgtctctggcatataagccgacagttaactgccgctg 72  Q
    ||||||| |||||||||| |||||||||||  |||||||||||||||||||||    
T  44655395 tccagcggtagttaactgcctctggcatatgcgccgacagttaactgccgctg 44655447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 373 - 424
Target Start/End: Complemental strand, 31585 - 31534
Alignment:
Q  373 tctataaagtttcgtagcatttcgactaagtctcgatttattttgatttttc 424  Q
    ||||||||||||||||| |||| || ||||| ||||||||||||||||||||    
T  31585 tctataaagtttcgtagaattttgaataagtttcgatttattttgatttttc 31534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 123 - 192
Target Start/End: Original strand, 40439994 - 40440063
Alignment:
Q  123 attttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacaga 192  Q
    |||||| ||||||| || ||||||||||||||||||||   |||||| |||| |||| ||||||||||||    
T  40439994 attttatgcgtttcagtcgaaaaatcaaaataaatcgacgcttattcggaatgctacgaaactttacaga 40440063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 372 - 424
Target Start/End: Complemental strand, 40440064 - 40440012
Alignment:
Q  372 atctataaagtttcgtagcatttcgactaagtctcgatttattttgatttttc 424  Q
    |||| ||||||||||||||||| ||| ||||  ||||||||||||||||||||    
T  40440064 atctgtaaagtttcgtagcattccgaataagcgtcgatttattttgatttttc 40440012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 192
Target Start/End: Original strand, 6172233 - 6172271
Alignment:
Q  154 aaatcgaaagttattcagaattctacaaaactttacaga 192  Q
    ||||||||| |||||||||||||||| ||||||||||||    
T  6172233 aaatcgaaacttattcagaattctacgaaactttacaga 6172271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 232
Target Start/End: Original strand, 6172859 - 6172949
Alignment:
Q  142 aaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccataaaagtacatatagatgatgtgaatagtttc 232  Q
    ||||||||||||||||||| | ||| ||  ||| |||| |||||||| |||| |||| ||| || ||||||| ||||||||| | ||||||    
T  6172859 aaaaatcaaaataaatcgagacttagtcgaaatactacgaaactttatagacacctctatataaatacatattgatgatgtgcaaagtttc 6172949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 75
Target Start/End: Complemental strand, 31298836 - 31298782
Alignment:
Q  21 ccagcgttagttaactgtctctggcatataagccgacagttaactgccgctggct 75  Q
    |||||| |||||||||| |||||||||||  | || |||||||||||||||||||    
T  31298836 ccagcggtagttaactgcctctggcatatgcgtcggcagttaactgccgctggct 31298782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 75
Target Start/End: Complemental strand, 44656553 - 44656499
Alignment:
Q  21 ccagcgttagttaactgtctctggcatataagccgacagttaactgccgctggct 75  Q
    |||||| |||||||||| |||||||||||   ||| |||||||||||||||||||    
T  44656553 ccagcggtagttaactgcctctggcatatgcaccggcagttaactgccgctggct 44656499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 431
Target Start/End: Original strand, 31298699 - 31298752
Alignment:
Q  378 aaagtttcgtagcatttcgactaagtctcgatttattttgatttttcaaccgaa 431  Q
    |||||||||||| |||  || ||| | |||||||||||||||||||||||||||    
T  31298699 aaagtttcgtagaattctgaataaatttcgatttattttgatttttcaaccgaa 31298752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 379 - 423
Target Start/End: Original strand, 29425508 - 29425552
Alignment:
Q  379 aagtttcgtagcatttcgactaagtctcgatttattttgattttt 423  Q
    ||||||| ||| ||| |||||| ||||||||||||||||||||||    
T  29425508 aagtttcatagaattccgactacgtctcgatttattttgattttt 29425552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 196; Significance: 1e-106; HSPs: 62)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 22 - 442
Target Start/End: Original strand, 42056468 - 42056892
Alignment:
Q  22 cagcgttagttaactgtctctggcatataagccgacagttaactgccgctggctcctccagaggcagttaactcccgctggctttgctactttttattat 121  Q
    ||||| ||| ||||||||| ||||||||  |||| ||||||||||||||||||||||||||||| |||||||| |||| ||||||||| |||||||||||    
T  42056468 cagcggtagctaactgtctttggcatatgcgccggcagttaactgccgctggctcctccagaggtagttaactgccgccggctttgctgctttttattat 42056567  T
Q  122 aattttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccataaaagtacatatagatgatg 221  Q
     |||||||||||||| ||||||||||||||||||||||||||||| | |||||||||| ||||||||||||| |||| |||||| |||||||||||||||    
T  42056568 gattttacgcgtttcagtagaaaaatcaaaataaatcgaaagttacttagaattctacgaaactttacagacacctctataaaaatacatatagatgatg 42056667  T
Q  222 tgaatagtttcttaacattccgaataagtct---tattttannnnnnnccgaccgaaacgcacaaaatcgcaattg-nnnnnnnnnnnnnntccgacact 317  Q
    | || |||||| |||||||||||||||||||   | ||||         |||||||||||| ||||||||||||||                 |||||||    
T  42056668 taaaaagtttcgtaacattccgaataagtctcgatttttttatttttttcgaccgaaacgcgcaaaatcgcaattgaaaaaataaaaaaaaatcgacact 42056767  T
Q  318 tattcaaaatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttattttg 417  Q
    |||||  ||||| ||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  42056768 tattcggaatgttacgaaactttttacatcatctatatgtatttatatagaggtgtctataaagtttcgtagcatttcgactaagtctcaatttattttg 42056867  T
Q  418 atttttcaaccgaactatgcaaaat 442  Q
    ||||||| ||||||| |||||||||    
T  42056868 atttttcgaccgaaccatgcaaaat 42056892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 110 - 448
Target Start/End: Complemental strand, 17646611 - 17646271
Alignment:
Q  110 actttttattataattttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctac-aaaactttacagacgcctccataaaagta 208  Q
    |||||||||||| |||||||| ||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||  |||| |||||| ||    
T  17646611 actttttattatgattttacgtgttttagtagaaaaatcaaaataaatcgaaagttattcagaattctacgaaaactttatagaaacctctataaaaata 17646512  T
Q  209 catatagatgatgtgaatagtttcttaacattccgaataagtcttattttannnnnnnccgaccgaaacgcacaaaatcgcaattgnnnnnnnnnnnnnn 308  Q
    |||||||||||| |||| |||||| |||||||||||||||||||   |||        ||||||||||| | ||||||||||||||                  
T  17646511 catatagatgatctgaaaagtttcgtaacattccgaataagtctcgatttttttttttccgaccgaaacacgcaaaatcgcaattgaaaaaataaaaaaa 17646412  T
Q  309 tc-cgacacttattcaaaatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcg 407  Q
       | ||| ||||||  ||||| |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||    
T  17646411 aatcaacatttattcggaatgttacgaaactttgcacataatctatatgtatttatatagaggtgtctataaagtttcgtagcatttcgactaagtgtcg 17646312  T
Q  408 atttattttgatttttcaaccgaactatgcaaaattgcaat 448  Q
    ||||||||||||||||| ||||||| ||||||||| |||||    
T  17646311 atttattttgatttttcgaccgaaccatgcaaaatcgcaat 17646271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 17 - 193
Target Start/End: Original strand, 2898008 - 2898184
Alignment:
Q  17 acctccagcgttagttaactgtctctggcatataagccgacagttaactgccgctggctcctccagaggcagttaactcccgctggctttgctacttttt 116  Q
    |||||||||| |||||||||| |||||||||||  ||| ||||||||||||||||||||||| ||||||||||||||| |||||| ||||| | ||||||    
T  2898008 acctccagcggtagttaactgcctctggcatatgcgccaacagttaactgccgctggctccttcagaggcagttaactgccgctgactttgatgcttttt 2898107  T
Q  117 attataattttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagac 193  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||||||||||    
T  2898108 attatgattttacgcgtttcggtcgaaaaatcaaaataaatcgaaacttattcagaattctacgaaactttacagac 2898184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 84 - 250
Target Start/End: Complemental strand, 12951587 - 12951421
Alignment:
Q  84 ggcagttaactcccgctggctttgctactttttattataattttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaa 183  Q
    ||||||||||| ||||| ||||||||  |||||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| |||    
T  12951587 ggcagttaactgccgctagctttgctgttttttattatgattttacgcatttcggtagaaaaatcaaaataaatcgaaatttattcagaattctacgaaa 12951488  T
Q  184 ctttacagacgcctccataaaagtacatatagatgatgtgaatagtttcttaacattccgaataagt 250  Q
    |||||||||| |||| |||||| ||||||||||||||||||| |||||| |||||||||||||||||    
T  12951487 ctttacagacacctctataaaaatacatatagatgatgtgaaaagtttcgtaacattccgaataagt 12951421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 28 - 193
Target Start/End: Original strand, 17644800 - 17644965
Alignment:
Q  28 tagttaactgtctctggcatataagccgacagttaactgccgctggctcctccagaggcagttaactcccgctggctttgctactttttattataatttt 127  Q
    |||||||||| |||||||||||  |||||||||||||||||||||||||||||||| |||||||||| |||||| ||||||| ||||||||||| ||| |    
T  17644800 tagttaactgcctctggcatatgcgccgacagttaactgccgctggctcctccagaagcagttaactgccgctgcctttgctgctttttattatgattct 17644899  T
Q  128 acgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagac 193  Q
    ||||||||| || |||||||||||||||||||||| |||||||||||||||| |||||||||||||    
T  17644900 acgcgtttcagtcgaaaaatcaaaataaatcgaaacttattcagaattctacgaaactttacagac 17644965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 84 - 250
Target Start/End: Complemental strand, 12937424 - 12937258
Alignment:
Q  84 ggcagttaactcccgctggctttgctactttttattataattttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaa 183  Q
    ||||||||||| ||||| ||||||||  |||||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||  |||    
T  12937424 ggcagttaactgccgctagctttgctgttttttattatgattttacgcatttcggtagaaaaatcaaaataaatcgaaatttattcagaattctatgaaa 12937325  T
Q  184 ctttacagacgcctccataaaagtacatatagatgatgtgaatagtttcttaacattccgaataagt 250  Q
    |||||||||| |||| |||||| ||||||||||||||||||| |||||| |||||||||||||||||    
T  12937324 ctttacagacacctctataaaaatacatatagatgatgtgaaaagtttcgtaacattccgaataagt 12937258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 21 - 193
Target Start/End: Complemental strand, 16931269 - 16931098
Alignment:
Q  21 ccagcgttagttaactgtctctggcatataagccgacagttaactgccgctggctcctccagaggcagttaactcccgctggctttgctactttttatta 120  Q
    |||||| |||||||||| |||||||||||  || | ||||||| |||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||    
T  16931269 ccagcggtagttaactgcctctggcatatgcgctggcagttaa-tgccgctggctcctccagaggcagttaactgccgttggctttgctgctttttatta 16931171  T
Q  121 taattttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagac 193  Q
    | ||||||||||||||||| ||||||||||||||||| |||| |||||||||||||||| |||||||||||||    
T  16931170 tgattttacgcgtttcggtcgaaaaatcaaaataaattgaaatttattcagaattctacgaaactttacagac 16931098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 28 - 193
Target Start/End: Original strand, 12936325 - 12936490
Alignment:
Q  28 tagttaactgtctctggcatataagccgacagttaactgccgctggctcctccagaggcagttaactcccgctggctttgctactttttattataatttt 127  Q
    |||||||| | |||||||||||   ||| |||||||||| ||||||||||||||||||||||||||  |||||||||||||| ||||||||||| |||||    
T  12936325 tagttaacagcctctggcatatgcaccggcagttaactgtcgctggctcctccagaggcagttaaccgccgctggctttgctgctttttattatgatttt 12936424  T
Q  128 acgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagac 193  Q
    |||||||||||| ||||||||||||||||||||||  ||||||||||||||  |||||||||||||    
T  12936425 acgcgtttcggtcgaaaaatcaaaataaatcgaaacatattcagaattctatgaaactttacagac 12936490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 28 - 193
Target Start/End: Original strand, 12950480 - 12950645
Alignment:
Q  28 tagttaactgtctctggcatataagccgacagttaactgccgctggctcctccagaggcagttaactcccgctggctttgctactttttattataatttt 127  Q
    |||||||||| |||||||||||   ||| |||||||||| ||||||||||||||||||||||||||  ||||||| |||||| ||||||||||| |||||    
T  12950480 tagttaactgcctctggcatatgcaccggcagttaactgtcgctggctcctccagaggcagttaaccgccgctggttttgctgctttttattatgatttt 12950579  T
Q  128 acgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagac 193  Q
    |||||||||||| ||||||||||||||||||||||  ||||||||||||||  |||||||||||||    
T  12950580 acgcgtttcggtcgaaaaatcaaaataaatcgaaacatattcagaattctatgaaactttacagac 12950645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 123 - 448
Target Start/End: Original strand, 27808719 - 27809040
Alignment:
Q  123 attttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccataaaagtacatatagatgatgt 222  Q
    |||||||||||||||||   |||||||||||     |||| |||||||||||||||| |||||||||||||   || |||||| ||||||||||||||||    
T  27808719 attttacgcgtttcggtcttaaaatcaaaat-----gaaacttattcagaattctacgaaactttacagacaagtctataaaaatacatatagatgatgt 27808813  T
Q  223 gaatagtttcttaacattccgaataagtc--ttattttannnnnnnccgaccgaaacgcacaaaatcgcaattgnnnnnnnnnnnnnntccgacacttat 320  Q
    ||| |||||  ||||||||||||||||||  || ||||         |||||||||||| |||||| |||||||              |  |||||||||    
T  27808814 gaaaagttttgtaacattccgaataagtcaatttttttttattctttcgaccgaaacgcgcaaaatagcaattgaaaaaataaaaaaatt-gacacttat 27808912  T
Q  321 tcaaaatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttattttgatt 420  Q
    ||  ||||| |||||||||||||||||||||||| |||||| ||||||||| |||||||| ||||||||||||| |||||||||| || |||||||||||    
T  27808913 tcgtaatgttacgaaactttgcacatcatctatacgtatttttatagaggtgtctataaaatttcgtagcatttagactaagtcttgaattattttgatt 27809012  T
Q  421 tttcaaccgaactatgcaaaattgcaat 448  Q
    |||| ||||||| |||||||||||||||    
T  27809013 tttcgaccgaaccatgcaaaattgcaat 27809040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 103 - 252
Target Start/End: Complemental strand, 8214268 - 8214119
Alignment:
Q  103 ctttgctactttttattataattttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccata 202  Q
    ||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||    
T  8214268 ctttgctgctttttattatgattttacgcgtttcggtcgaaaaatcaaaataaatcgaaagttattcagaattctacgaaactttacagacacctcctta 8214169  T
Q  203 aaagtacatatagatgatgtgaatagtttcttaacattccgaataagtct 252  Q
    ||| |||||||||||  |||||| | |||| ||||||||| |||||||||    
T  8214168 aaaatacatatagatattgtgaaaattttcgtaacattccaaataagtct 8214119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 31 - 193
Target Start/End: Original strand, 16930280 - 16930441
Alignment:
Q  31 ttaactgtctctggcatataagccgacagttaactgccgctggctcctccagaggcagttaactcccgctggctttgctactttttattataattttacg 130  Q
    ||||||||||||||||| |  |||| ||||||||||||||| || ||||| || |||||||||| |||||||||||||| ||||||||||  ||||||||    
T  16930280 ttaactgtctctggcatgtgcgccggcagttaactgccgctagcacctccggatgcagttaactgccgctggctttgctgctttttattaagattttacg 16930379  T
Q  131 cgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagac 193  Q
    ||||||||||| |||||||||||||| ||||||||||| |||||||||| |||||||||||||    
T  16930380 cgtttcggtag-aaaatcaaaataaaccgaaagttattaagaattctacgaaactttacagac 16930441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 28 - 193
Target Start/End: Original strand, 22964734 - 22964899
Alignment:
Q  28 tagttaactgtctctggcatataagccgacagttaactgccgctggctcctccagaggcagttaactcccgctggctttgctactttttattataatttt 127  Q
    |||||||||  |||| ||||||  ||||  |||||||||||||||||||||||||||| |||||||| || ||||||||||| ||||||||| | |||||    
T  22964734 tagttaacttcctcttgcatatgcgccgggagttaactgccgctggctcctccagaggtagttaactgcctctggctttgctgctttttattgtgatttt 22964833  T
Q  128 acgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagac 193  Q
    || ||||||||| |||||||||||||||||||||| |||||||||||| |||  ||||||||||||    
T  22964834 acacgtttcggtcgaaaaatcaaaataaatcgaaaattattcagaattatacgtaactttacagac 22964899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 100 - 215
Target Start/End: Complemental strand, 22965694 - 22965579
Alignment:
Q  100 tggctttgctactttttattataattttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctcc 199  Q
    ||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| |||| ||||     
T  22965694 tggctttgccactttttattatgattttacgcgtttcggtcgaaaaatcaaaataaatcgaaagttattcagaattctacgaaactttatagacacctct 22965595  T
Q  200 ataaaagtacatatag 215  Q
    |||||| |||||||||    
T  22965594 ataaaaatacatatag 22965579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 21 - 175
Target Start/End: Complemental strand, 2401740 - 2401586
Alignment:
Q  21 ccagcgttagttaactgtctctggcatataagccgacagttaactgccgctggctcctccagaggcagttaactcccgctggctttgctactttttatta 120  Q
    |||||| |||||||||| |  || |||||  |||||||||||| ||||| |||||||||||||||||| ||||| || || |||||||| ||||||||||    
T  2401740 ccagcggtagttaactgccgttgacatatgcgccgacagttaattgccgttggctcctccagaggcagctaactgcctctagctttgctgctttttatta 2401641  T
Q  121 taattttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaatt 175  Q
    | |||||| |||||||||| |||||||||||||||||||||| ||||||||||||    
T  2401640 tgattttatgcgtttcggtcgaaaaatcaaaataaatcgaaatttattcagaatt 2401586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 315 - 424
Target Start/End: Original strand, 2898883 - 2898992
Alignment:
Q  315 acttattcaaaatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttatt 414  Q
    ||||||||| ||||| || ||||||| |||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  2898883 acttattcagaatgttacaaaacttttcacatcttctatatgtatttatatagaggtgtctataaagtttcatagcatttcgactaagtctcgatttatt 2898982  T
Q  415 ttgatttttc 424  Q
    ||||||||||    
T  2898983 ttgatttttc 2898992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 311 - 442
Target Start/End: Complemental strand, 8214055 - 8213924
Alignment:
Q  311 cgacacttattcaaaatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatt 410  Q
    ||||||||||||  ||||| || | |||||| ||||||||||||||||||| ||||||||| ||||||||||||| | |||||| |||||||||||||||    
T  8214055 cgacacttattcggaatgttactatactttggacatcatctatatgtatttttatagaggtgtctataaagtttccttgcatttggactaagtctcgatt 8213956  T
Q  411 tattttgatttttcaaccgaactatgcaaaat 442  Q
    |||||||||||||| || |||| |||||||||    
T  8213955 tattttgatttttcgactgaaccatgcaaaat 8213924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 313 - 440
Target Start/End: Complemental strand, 12937191 - 12937062
Alignment:
Q  313 acacttattcaaaatgtcacgaaactttgcacatcatctatatgtatttatata--gaggtatctataaagtttcgtagcatttcgactaagtctcgatt 410  Q
    ||||||||||  ||||| | ||||||||||||||||| ||||||||||||||||  |||||  ||||||||||| |||||||||||||||||||||||||    
T  12937191 acacttattcggaatgttaagaaactttgcacatcatttatatgtatttatatatagaggtgcctataaagttttgtagcatttcgactaagtctcgatt 12937092  T
Q  411 tattttgatttttcaaccgaactatgcaaa 440  Q
    |||||||||||||| | ||||| |||||||    
T  12937091 tattttgatttttcgatcgaaccatgcaaa 12937062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 313 - 440
Target Start/End: Complemental strand, 12951354 - 12951225
Alignment:
Q  313 acacttattcaaaatgtcacgaaactttgcacatcatctatatgtatttatata--gaggtatctataaagtttcgtagcatttcgactaagtctcgatt 410  Q
    ||||||||||  ||||| | ||||||||||||||||| ||||||||||||||||  |||||  ||||||||||| |||||||||||||||||||||||||    
T  12951354 acacttattcggaatgttaagaaactttgcacatcatttatatgtatttatatatagaggtgcctataaagttttgtagcatttcgactaagtctcgatt 12951255  T
Q  411 tattttgatttttcaaccgaactatgcaaa 440  Q
    |||||||||||||| | ||||| |||||||    
T  12951254 tattttgatttttcgatcgaaccatgcaaa 12951225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 123 - 252
Target Start/End: Complemental strand, 21039024 - 21038895
Alignment:
Q  123 attttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccataaaagtacatatagatgatgt 222  Q
    ||||||||||||||||| |||||||||||||||||| ||| |||||||||||| ||| ||| |||| |||| |||| |||||| ||||||||||||||||    
T  21039024 attttacgcgtttcggttgaaaaatcaaaataaatcaaaacttattcagaattatacgaaattttatagacacctcaataaaaatacatatagatgatgt 21038925  T
Q  223 gaatagtttcttaacattccgaataagtct 252  Q
    ||| | |||| | |||||||||||||||||    
T  21038924 gaaaattttcgtgacattccgaataagtct 21038895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 84 - 252
Target Start/End: Complemental strand, 2899049 - 2898881
Alignment:
Q  84 ggcagttaactcccgctggctttgctactttttattataattttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaa 183  Q
    ||||||||||| |||||| ||||||| ||||||||||| ||||||||| ||| |||||||||||||||||||||||| | ||| ||  ||| |||  |||    
T  2899049 ggcagttaactgccgctgactttgctgctttttattatgattttacgcattttggtagaaaaatcaaaataaatcgagacttagtcgaaatgctatgaaa 2898950  T
Q  184 ctttacagacgcctccataaaagtacatatagatgatgtgaatagtttcttaacattccgaataagtct 252  Q
    ||||| |||| |||| ||| || |||||||||| |||||||| |||||  |||||||| ||||||||||    
T  2898949 ctttatagacacctctatataaatacatatagaagatgtgaaaagttttgtaacattctgaataagtct 2898881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 335 - 448
Target Start/End: Original strand, 18966627 - 18966740
Alignment:
Q  335 aactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttattttgatttttcaaccgaacta 434  Q
    ||||||||| ||| ||||||||||||| ||||||||| ||| |||||||| |||||||| |||||||||||||||||||||||||||||| |||||||      
T  18966627 aactttgcaaatcctctatatgtatttttatagaggtgtctgtaaagttttgtagcattccgactaagtctcgatttattttgatttttcgaccgaaccg 18966726  T
Q  435 tgcaaaattgcaat 448  Q
    |||||||| |||||    
T  18966727 tgcaaaatcgcaat 18966740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 28 - 189
Target Start/End: Complemental strand, 42057545 - 42057399
Alignment:
Q  28 tagttaactgtctctggcatataagccgacagttaactgccgctggctcctccagaggcagttaactcccgctggctttgctactttttattataatttt 127  Q
    |||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||               ||||||||||  |||||||| | |||||    
T  42057545 tagttaactgcctctggcatatgagccgacagttaactgccgcttgctcctccagag---------------tggctttgctgttttttattgtgatttt 42057461  T
Q  128 acgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttac 189  Q
    |||||||||||| ||||||| |||||||||||||| |||||||||||||||| |||||||||    
T  42057460 acgcgtttcggttgaaaaattaaaataaatcgaaacttattcagaattctacgaaactttac 42057399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 363 - 448
Target Start/End: Complemental strand, 2898787 - 2898702
Alignment:
Q  363 tatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttattttgatttttcaaccgaactatgcaaaattgcaat 448  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||    
T  2898787 tatataggtgtctataaagtttcgtagcatttcgactaagtctcgatttattttgatttttctaccgaaccatgcaaaatcgcaat 2898702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 312 - 442
Target Start/End: Complemental strand, 21038831 - 21038701
Alignment:
Q  312 gacacttattcaaaatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgattt 411  Q
    |||||||| ||  ||||| |||||||||| || || |||||||||||||| ||||||| | ||||||||||||| ||||||||||||||| |||| ||||    
T  21038831 gacacttaatcggaatgttacgaaacttttcatataatctatatgtatttttatagagttgtctataaagtttcatagcatttcgactaaatctcaattt 21038732  T
Q  412 attttgatttttcaaccgaactatgcaaaat 442  Q
    ||||||||||||  || |||| |||||||||    
T  21038731 attttgattttttgactgaaccatgcaaaat 21038701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 339 - 448
Target Start/End: Original strand, 28108721 - 28108830
Alignment:
Q  339 ttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttattttgatttttcaaccgaactatgca 438  Q
    ||||| ||| ||||||||||| | | ||||||| ||| ||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||  ||||    
T  28108721 ttgcatatcctctatatgtatatttctagaggtgtctgtaaagtttcgtagcattccgattaagtctcaatttattttgatttttcaaccgaaccgtgca 28108820  T
Q  439 aaattgcaat 448  Q
    ||||||||||    
T  28108821 aaattgcaat 28108830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 315 - 431
Target Start/End: Original strand, 12951421 - 12951537
Alignment:
Q  315 acttattcaaaatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttatt 414  Q
    ||||||||  ||||| |||||||||| |||||||||||||||||||| ||||||||| ||| ||||||||||||| |||  || ||| | ||||||||||    
T  12951421 acttattcggaatgttacgaaacttttcacatcatctatatgtatttttatagaggtgtctgtaaagtttcgtagaattctgaataaatttcgatttatt 12951520  T
Q  415 ttgatttttcaaccgaa 431  Q
    |||||||||| ||||||    
T  12951521 ttgatttttctaccgaa 12951537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 362 - 442
Target Start/End: Original strand, 16930459 - 16930539
Alignment:
Q  362 atatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttattttgatttttcaaccgaactatgcaaaat 442  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||  |||||||||    
T  16930459 atatagaggtgtctctaaagtttcgtagcatttcgactaagtctcgatttattttgatttttcgaccgaatcatgcaaaat 16930539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 84 - 193
Target Start/End: Original strand, 8213562 - 8213671
Alignment:
Q  84 ggcagttaactcccgctggctttgctactttttattataattttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaa 183  Q
    |||||||||||  | ||| ||||||| |||||||| || |||||| || ||||||| ||||||| |||||||||||||| |||||||||||||||| |||    
T  8213562 ggcagttaactatctctgtctttgctgctttttataatgattttatgcttttcggtcgaaaaattaaaataaatcgaaacttattcagaattctacgaaa 8213661  T
Q  184 ctttacagac 193  Q
    ||||||||||    
T  8213662 ctttacagac 8213671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 315 - 431
Target Start/End: Original strand, 12937258 - 12937374
Alignment:
Q  315 acttattcaaaatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttatt 414  Q
    ||||||||  ||||| |||||||||| |||||||||||||||||||| ||||||||| ||| ||||||||| ||| |||  || ||| | ||||||||||    
T  12937258 acttattcggaatgttacgaaacttttcacatcatctatatgtatttttatagaggtgtctgtaaagtttcatagaattctgaataaatttcgatttatt 12937357  T
Q  415 ttgatttttcaaccgaa 431  Q
    |||||||||| ||||||    
T  12937358 ttgatttttctaccgaa 12937374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 315 - 431
Target Start/End: Original strand, 21038897 - 21039013
Alignment:
Q  315 acttattcaaaatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttatt 414  Q
    ||||||||  |||||||||||| ||| |||||||||||||||||||| ||| ||||| |||||||| |||||||  |||  || ||||| | ||||||||    
T  21038897 acttattcggaatgtcacgaaaattttcacatcatctatatgtatttttattgaggtgtctataaaatttcgtataattctgaataagttttgatttatt 21038996  T
Q  415 ttgatttttcaaccgaa 431  Q
    |||||||||||||||||    
T  21038997 ttgatttttcaaccgaa 21039013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 325 - 448
Target Start/End: Complemental strand, 41473418 - 41473297
Alignment:
Q  325 aatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttattttgatttttc 424  Q
    ||||| ||| ||||||||||||  | ||||||||||| |||||||  || | ||||||||||||| ||||||||||| |||||| |||||||||||||||    
T  41473418 aatgttacggaactttgcacattctatatatgtatttttatagag--atgtgtaaagtttcgtagaatttcgactaaatctcgacttattttgatttttc 41473321  T
Q  425 aaccgaactatgcaaaattgcaat 448  Q
     |||||||  ||||||| ||||||    
T  41473320 gaccgaacagtgcaaaaatgcaat 41473297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 315 - 424
Target Start/End: Original strand, 17646470 - 17646580
Alignment:
Q  315 acttattcaaaatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatctataaag-tttcgtagcatttcgactaagtctcgatttat 413  Q
    ||||||||  ||||| |||||||||| || ||||||||||||||||| ||||||||| ||||||||| |||||||| |||  || ||| | |||||||||    
T  17646470 acttattcggaatgttacgaaacttttcagatcatctatatgtatttttatagaggtttctataaagttttcgtagaattctgaataactttcgatttat 17646569  T
Q  414 tttgatttttc 424  Q
    |||||||||||    
T  17646570 tttgatttttc 17646580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 315 - 424
Target Start/End: Complemental strand, 42056696 - 42056587
Alignment:
Q  315 acttattcaaaatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttatt 414  Q
    ||||||||  ||||| ||||||||||  ||||||||||||||||||| ||||||||| ||| ||||||||||||| |||   | ||| | ||||||||||    
T  42056696 acttattcggaatgttacgaaactttttacatcatctatatgtatttttatagaggtgtctgtaaagtttcgtagaattctaagtaactttcgatttatt 42056597  T
Q  415 ttgatttttc 424  Q
    ||||||||||    
T  42056596 ttgatttttc 42056587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 121 - 189
Target Start/End: Complemental strand, 27809671 - 27809603
Alignment:
Q  121 taattttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttac 189  Q
    ||||||||||||||| ||| |||||||||||||||||| ||| |||||||||||||||| |||||||||    
T  27809671 taattttacgcgttttggtcgaaaaatcaaaataaatcaaaacttattcagaattctacgaaactttac 27809603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 134 - 250
Target Start/End: Complemental strand, 42056881 - 42056765
Alignment:
Q  134 ttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccataaaagtacatatagatgatgtgaatagtttct 233  Q
    |||||| ||||||||||||||||| || | ||| ||  ||| |||| |||||||| |||| |||| ||| || |||||||||||||||| || ||||||     
T  42056881 ttcggtcgaaaaatcaaaataaattgagacttagtcgaaatgctacgaaactttatagacacctctatataaatacatatagatgatgtaaaaagtttcg 42056782  T
Q  234 taacattccgaataagt 250  Q
    |||||||||||||||||    
T  42056781 taacattccgaataagt 42056765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 134 - 248
Target Start/End: Original strand, 17646288 - 17646402
Alignment:
Q  134 ttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccataaaagtacatatagatgatgtgaatagtttct 233  Q
    |||||| |||||||||||||||||||| | ||| ||  ||| |||| |||||||| |||| |||| ||| || ||||||||||| ||||| | ||||||     
T  17646288 ttcggtcgaaaaatcaaaataaatcgacacttagtcgaaatgctacgaaactttatagacacctctatataaatacatatagattatgtgcaaagtttcg 17646387  T
Q  234 taacattccgaataa 248  Q
    |||||||||||||||    
T  17646388 taacattccgaataa 17646402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 134 - 216
Target Start/End: Complemental strand, 18966723 - 18966641
Alignment:
Q  134 ttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccataaaagtacatataga 216  Q
    |||||| |||||||||||||||||||| | ||| || |||| |||||||||||||||||| |||| |||||| ||||||||||    
T  18966723 ttcggtcgaaaaatcaaaataaatcgagacttagtcggaatgctacaaaactttacagacacctctataaaaatacatataga 18966641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 39940089 - 39940163
Alignment:
Q  116 tattataattttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttaca 190  Q
    |||||| |||||||| ||||||||  ||||||||||||||||||||| ||||||||| |||||| ||||||||||    
T  39940089 tattatgattttacgtgtttcggtcaaaaaatcaaaataaatcgaaaattattcagagttctacgaaactttaca 39940163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 350 - 431
Target Start/End: Original strand, 22965579 - 22965660
Alignment:
Q  350 ctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttattttgatttttcaaccgaa 431  Q
    |||||||||||| ||||||||| ||||||||||||||||| |||  || ||| | |||||||||||||||||||| ||||||    
T  22965579 ctatatgtatttttatagaggtgtctataaagtttcgtagaattctgaataactttcgatttattttgatttttcgaccgaa 22965660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 325 - 442
Target Start/End: Original strand, 30463501 - 30463617
Alignment:
Q  325 aatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttattttgatttttc 424  Q
    ||||| ||| ||| || |||||| ||||||||||||| || |||||| |||||||| ||| ||| |||| ||||||||||||||| |||||||||||||     
T  30463501 aatgttacggaacattccacatcctctatatgtatttttacagaggtgtctataaa-tttggtaacattccgactaagtctcgatatattttgatttttt 30463599  T
Q  425 aaccgaactatgcaaaat 442  Q
     |||||||  ||||||||    
T  30463600 gaccgaaccgtgcaaaat 30463617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 123 - 193
Target Start/End: Complemental strand, 28109468 - 28109398
Alignment:
Q  123 attttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagac 193  Q
    |||||||| |||||||| |||||||||||||||||||||  ||||| ||||| |||| |||||||||||||    
T  28109468 attttacgtgtttcggtcgaaaaatcaaaataaatcgaagcttatttagaatgctacgaaactttacagac 28109398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 39940028 - 39940089
Alignment:
Q  28 tagttaactgtctctggcatataagccgacagttaactgccgctggctcctccagaggcagt 89  Q
    |||||||||| |||||||||||  |||| |||||||||||||||| ||||||||||||||||    
T  39940028 tagttaactgcctctggcatatgcgccggcagttaactgccgctgactcctccagaggcagt 39940089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 141 - 250
Target Start/End: Original strand, 12937078 - 12937189
Alignment:
Q  141 gaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccataaa--agtacatatagatgatgtgaatagtttcttaaca 238  Q
    |||||||||||||||||||| | ||| ||  ||| ||||||||||||| || | |||| ||| |  | |||||||| |||||||| | ||||||||||||    
T  12937078 gaaaaatcaaaataaatcgagacttagtcgaaatgctacaaaactttataggcacctctatatataaatacatataaatgatgtgcaaagtttcttaaca 12937177  T
Q  239 ttccgaataagt 250  Q
    ||||||||||||    
T  12937178 ttccgaataagt 12937189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 141 - 250
Target Start/End: Original strand, 12951241 - 12951352
Alignment:
Q  141 gaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccataaa--agtacatatagatgatgtgaatagtttcttaaca 238  Q
    |||||||||||||||||||| | ||| ||  ||| ||||||||||||| || | |||| ||| |  | |||||||| |||||||| | ||||||||||||    
T  12951241 gaaaaatcaaaataaatcgagacttagtcgaaatgctacaaaactttataggcacctctatatataaatacatataaatgatgtgcaaagtttcttaaca 12951340  T
Q  239 ttccgaataagt 250  Q
    ||||||||||||    
T  12951341 ttccgaataagt 12951352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 123 - 177
Target Start/End: Complemental strand, 6807838 - 6807784
Alignment:
Q  123 attttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattct 177  Q
    ||||||||||||| ||| |||||||||||||||||||||| ||||||| ||||||    
T  6807838 attttacgcgttttggttgaaaaatcaaaataaatcgaaatttattcaaaattct 6807784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 325 - 431
Target Start/End: Original strand, 8214131 - 8214237
Alignment:
Q  325 aatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttattttgatttttc 424  Q
    ||||| |||||| ||| ||||  |||||||||||||| ||  ||||| ||| ||||||||||||| |||  || ||| | ||||||||||||||||||||    
T  8214131 aatgttacgaaaattttcacaatatctatatgtatttttaaggaggtgtctgtaaagtttcgtagaattctgaataactttcgatttattttgatttttc 8214230  T
Q  425 aaccgaa 431  Q
     ||||||    
T  8214231 gaccgaa 8214237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 335 - 424
Target Start/End: Original strand, 1818866 - 1818955
Alignment:
Q  335 aactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttattttgatttttc 424  Q
    ||||||| | ||| ||||||||||||| ||   |||| |||  |||||| | || |||||||||||||||||||||||||||||||||||    
T  1818866 aactttgtagatcctctatatgtatttttacgtaggtgtctgcaaagttccttaacatttcgactaagtctcgatttattttgatttttc 1818955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 350 - 423
Target Start/End: Original strand, 31064600 - 31064673
Alignment:
Q  350 ctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttattttgattttt 423  Q
    |||||||||||| |||| || | ||| | |||||| |||||||| ||||||||||| |||||||||||||||||    
T  31064600 ctatatgtatttttatatagttgtctgtgaagttttgtagcattccgactaagtctagatttattttgattttt 31064673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 134 - 250
Target Start/End: Complemental strand, 27809023 - 27808907
Alignment:
Q  134 ttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccataaaagtacatatagatgatgtgaatagtttct 233  Q
    |||||| ||||||||||||||| || | | ||| ||  ||| |||| ||| |||| |||| |||| |||||| ||| ||||||||||||| | ||||||     
T  27809023 ttcggtcgaaaaatcaaaataattcaagacttagtctaaatgctacgaaattttatagacacctctataaaaatacgtatagatgatgtgcaaagtttcg 27808924  T
Q  234 taacattccgaataagt 250  Q
    ||||||| |||||||||    
T  27808923 taacattacgaataagt 27808907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 315 - 389
Target Start/End: Complemental strand, 27808841 - 27808767
Alignment:
Q  315 acttattcaaaatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtag 389  Q
    ||||||||  ||||| || ||||||| |||||||||||||||||||| ||||||  | ||| |||||||||||||    
T  27808841 acttattcggaatgttacaaaacttttcacatcatctatatgtatttttatagacttgtctgtaaagtttcgtag 27808767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 141 - 250
Target Start/End: Original strand, 8213942 - 8214051
Alignment:
Q  141 gaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccataaaagtacatatagatgatgtgaatagtttcttaacatt 240  Q
    |||||||||||||||||||| | ||| ||  ||| | |  |||||||| |||| |||| |||||| ||||||||||||||||  | ||| |  |||||||    
T  8213942 gaaaaatcaaaataaatcgagacttagtccaaatgcaaggaaactttatagacacctctataaaaatacatatagatgatgtccaaagtatagtaacatt 8214041  T
Q  241 ccgaataagt 250  Q
    ||||||||||    
T  8214042 ccgaataagt 8214051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 10284102 - 10284163
Alignment:
Q  129 cgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttaca 190  Q
    |||||||| || ||||||| ||||||||| |||| ||||||||||||| || ||||||||||    
T  10284102 cgcgtttcagttgaaaaataaaaataaattgaaacttattcagaattcaacgaaactttaca 10284163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 142 - 250
Target Start/End: Original strand, 21038720 - 21038828
Alignment:
Q  142 aaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccataaaagtacatatagatgatgtgaatagtttcttaacattc 241  Q
    |||||||||||||||| || | ||| ||  ||| |||  |||||||| ||||  ||| |||||| ||||||||||| || |||| |||||| ||||||||    
T  21038720 aaaaatcaaaataaattgagatttagtcgaaatgctatgaaactttatagacaactctataaaaatacatatagattatatgaaaagtttcgtaacattc 21038819  T
Q  242 cgaataagt 250  Q
    ||| |||||    
T  21038820 cgattaagt 21038828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 72
Target Start/End: Complemental strand, 2899083 - 2899032
Alignment:
Q  21 ccagcgttagttaactgtctctggcatataagccgacagttaactgccgctg 72  Q
    |||||| ||||||| ||||||||||||||| | || ||||||||||||||||    
T  2899083 ccagcggtagttaaatgtctctggcatatacgtcggcagttaactgccgctg 2899032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 71
Target Start/End: Complemental strand, 12937451 - 12937408
Alignment:
Q  28 tagttaactgtctctggcatataagccgacagttaactgccgct 71  Q
    ||||||||||||||||||||||  |||| |||||||||||||||    
T  12937451 tagttaactgtctctggcatatgcgccggcagttaactgccgct 12937408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 252
Target Start/End: Complemental strand, 22965209 - 22965170
Alignment:
Q  213 tagatgatgtgaatagtttcttaacattccgaataagtct 252  Q
    ||||||||||||| |||||| |||||||||||||||||||    
T  22965209 tagatgatgtgaaaagtttcgtaacattccgaataagtct 22965170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 377 - 431
Target Start/End: Complemental strand, 2898179 - 2898125
Alignment:
Q  377 taaagtttcgtagcatttcgactaagtctcgatttattttgatttttcaaccgaa 431  Q
    ||||||||||||| |||  || ||||| |||||||||||||||||||| ||||||    
T  2898179 taaagtttcgtagaattctgaataagtttcgatttattttgatttttcgaccgaa 2898125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 134 - 216
Target Start/End: Complemental strand, 28108813 - 28108731
Alignment:
Q  134 ttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccataaaagtacatataga 216  Q
    |||||| ||||||||||||||||| || | ||| || |||| |||| ||||||||||||| |||| | |||  ||||||||||    
T  28108813 ttcggttgaaaaatcaaaataaattgagacttaatcggaatgctacgaaactttacagacacctctagaaatatacatataga 28108731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 123 - 157
Target Start/End: Complemental strand, 30471331 - 30471297
Alignment:
Q  123 attttacgcgtttcggtagaaaaatcaaaataaat 157  Q
    ||||||||||||||||| |||||||||||||||||    
T  30471331 attttacgcgtttcggtcgaaaaatcaaaataaat 30471297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 123 - 193
Target Start/End: Original strand, 31064526 - 31064596
Alignment:
Q  123 attttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagac 193  Q
    ||||| || |||||| || |||||||||||||||||||   |||||| |||| |||||||||||| |||||    
T  31064526 attttgcgtgtttcgataaaaaaatcaaaataaatcgatgtttattcggaatgctacaaaactttgcagac 31064596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 377 - 431
Target Start/End: Original strand, 42057400 - 42057454
Alignment:
Q  377 taaagtttcgtagcatttcgactaagtctcgatttattttgatttttcaaccgaa 431  Q
    ||||||||||||| |||  || ||||| |||||||||||| ||||||||||||||    
T  42057400 taaagtttcgtagaattctgaataagtttcgatttattttaatttttcaaccgaa 42057454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 196; Significance: 1e-106; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 58 - 448
Target Start/End: Complemental strand, 34815654 - 34815264
Alignment:
Q  58 agttaactgccgctggctcctccagaggcagttaactcccgctggctttgctactttttattataattttacgcgtttcggtagaaaaatcaaaataaat 157  Q
    |||||| ||||||||| |||||||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  34815654 agttaattgccgctggatcctccagaggcagttaactgccgctggttttgctgctttttattataattttacgcgtttcggtagaaaaatcaaaataaat 34815555  T
Q  158 cgaaagttattcagaattctacaaaactttacagacgcctccataaaagtacatatagatgatgtgaatagtttcttaacattccgaataagtc----tt 253  Q
    |||||||||||||||||||||| ||||||||||||| |||| |||||| ||||||||||||||||||| |||||| |||||||| |||||||||    ||    
T  34815554 cgaaagttattcagaattctacgaaactttacagacacctctataaaaatacatatagatgatgtgaaaagtttcgtaacattctgaataagtctcgatt 34815455  T
Q  254 attttannnnnnnccgaccgaaacgcacaaaatcgcaattgnnnnnnnnnnnnnntccgacacttattcaaaatgtcacgaaactttgcacatcatctat 353  Q
     ||||         |||||||||||| |||||| |||||||                ||||||||||||  ||||| || | ||||| ||||||||||||    
T  34815454 tttttttattttttcgaccgaaacgcgcaaaattgcaattgaaaaaaaaaaat----cgacacttattcggaatgttacaatacttttcacatcatctat 34815359  T
Q  354 atgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttattttgatttttcaaccgaactatgcaaaattgcaat 448  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||    
T  34815358 atgtatttatatagaggtgtctataaagtttcgtagcatttcgactaagtctcgatttattttgatttttcgaccgaaccatgcaaaatcgcaat 34815264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 84 - 442
Target Start/End: Complemental strand, 51936563 - 51936202
Alignment:
Q  84 ggcagttaactcccgctggctttgctactttttattataattttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaa 183  Q
    ||||||||||| ||||||  |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  51936563 ggcagttaactgccgctgaatttgctgctttttattatgattttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacgaaa 51936464  T
Q  184 ctttacagacgcctccataaaagtacatatagatgatgtgaatagtttcttaacattccgaataagtct---tattttannnnnnnccgaccgaaacgca 280  Q
    |||||||||| |||| || ||| ||||||||||||||||||| |||||| ||||||||| |||||||||   | ||||         ||||||||||||     
T  51936463 ctttacagacacctctatgaaaatacatatagatgatgtgaaaagtttcgtaacattccaaataagtctcgattttttttattttttcgaccgaaacgcg 51936364  T
Q  281 caaaatcgcaattgnnnnnnnnnnnnnntccgacacttattcaaaatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatctataaa 380  Q
    ||||||||||||||                |||||||||||   ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  51936363 caaaatcgcaattgaaaaaataaaaaaaatcgacacttatttggaatgttacgaaactttgcacatcatctatatgtatttatatagaggtgtctataaa 51936264  T
Q  381 gtttcgtagcatttcgactaagtctcgatttattttgatttttcaaccgaactatgcaaaat 442  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||||| |||||||||    
T  51936263 gtttcgtagcatttcgactaagtttcgatttattttgatttttcgaccgaaccatgcaaaat 51936202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 29 - 448
Target Start/End: Original strand, 7998253 - 7998675
Alignment:
Q  29 agttaactgtctctggcatataagccgacagttaactgccgctggctcctccagaggcagttaactcccgctggctttgctactttttattataatttta 128  Q
    ||||||||| ||| |||||||  |||| |||||||||  |||||||||||| |||||||||||||||||  ||||||||||  ||||||||||  |||||    
T  7998253 agttaactgcctccggcatatgcgccggcagttaactttcgctggctcctctagaggcagttaactccctttggctttgctgttttttattatggtttta 7998352  T
Q  129 cgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccataaaagtacatatagatgatgtgaatag 228  Q
    ||||||||| | |||||||||||||||||||||| |||||||||||||||| |||||||||| || |||| |||||| ||||||||||||||||||| |     
T  7998353 cgcgtttcgttcgaaaaatcaaaataaatcgaaatttattcagaattctacgaaactttacacacacctctataaaaatacatatagatgatgtgaa-aa 7998451  T
Q  229 tttcttaacattccgaataagtc----ttattttannnnnnnccgaccgaaacgcacaaaatcgcaattgnnnnnnnnnnnnnntccgacacttattcaa 324  Q
    |||| ||||||||||||||||||    || ||||         ||||| |||| | ||||||||||||||                ||||||||||||      
T  7998452 tttcgtaacattccgaataagtctcgatttttttttattttttcgaccaaaacacgcaaaatcgcaattgaaaaaataaaaaaaatcgacacttattcgg 7998551  T
Q  325 aatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttattttgatttttc 424  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||| | | |||||||||||||||||||||||||||| ||||||||||| |||||||    
T  7998552 aatgttacgaaactttgcacatcatctatatgtatttttatagaggtgtgtgtaaagtttcgtagcatttcgactaagtcacgatttattttaatttttc 7998651  T
Q  425 aaccgaactatgcaaaattgcaat 448  Q
     ||||||| ||| ||||| |||||    
T  7998652 gaccgaaccatgtaaaatcgcaat 7998675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 28 - 192
Target Start/End: Original strand, 51935458 - 51935622
Alignment:
Q  28 tagttaactgtctctggcatataagccgacagttaactgccgctggctcctccagaggcagttaactcccgctggctttgctactttttattataatttt 127  Q
    |||||| ||| |||||||||||  | || ||||||||||||  ||||||||||| |||||||||||| |||||||||||||| ||||||||||| |||||    
T  51935458 tagttatctgcctctggcatatgcgtcggcagttaactgccattggctcctccaaaggcagttaactgccgctggctttgctgctttttattatgatttt 51935557  T
Q  128 acgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacaga 192  Q
    |||||||||||| |||||||||||||||||||||| |||||||||||| ||| ||||||||||||    
T  51935558 acgcgtttcggtcgaaaaatcaaaataaatcgaaacttattcagaattttacgaaactttacaga 51935622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 123 - 445
Target Start/End: Original strand, 47356388 - 47356711
Alignment:
Q  123 attttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccataaaagtacatatagatgatgt 222  Q
    ||||||||| ||||| |  ||||||||||||||||| ||| ||||||||||||| || ||| |||| |||  |||| |||||| || |||||| ||||||    
T  47356388 attttacgcatttcgatttaaaaatcaaaataaatcaaaatttattcagaattcaacgaaattttatagatacctctataaaaatatatataggtgatgt 47356487  T
Q  223 gaatagtttcttaacattccgaataagtctt-attttannnnnnnccgaccgaaacgcacaaaatcgcaattgnnnnnnnnnnnnnntccgacacttatt 321  Q
    | | |||||| ||||||||||| |||||||  |||||         ||||||||| || ||||||||||||||                |||||||||||    
T  47356488 gcaaagtttcgtaacattccgattaagtctcgatttttttatttttcgaccgaaatgcgcaaaatcgcaattgaaaaaataaaaaaaatcgacacttatt 47356587  T
Q  322 caaaatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttattttgattt 421  Q
       ||||| || |||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  47356588 tggaatgttacaaaactttgcacatcatctatatgtatttttatagaggtgtctataaagttttgtagcatttcgactaagcctcgatttattttgattt 47356687  T
Q  422 ttcaaccgaactatgcaaaattgc 445  Q
    ||| ||| ||| ||||||||||||    
T  47356688 ttcgaccaaaccatgcaaaattgc 47356711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 28 - 193
Target Start/End: Original strand, 34814547 - 34814715
Alignment:
Q  28 tagttaactgtctctggcatataagccgacagttaa---ctgccgctggctcctccagaggcagttaactcccgctggctttgctactttttattataat 124  Q
    ||||||||||||| ||||||||  |||| |||||||   ||||||||||||||| ||||||||||||||| ||||| |||||| | ||||||||||| ||    
T  34814547 tagttaactgtctttggcatatgcgccggcagttaataactgccgctggctccttcagaggcagttaactgccgcttgctttgatgctttttattatgat 34814646  T
Q  125 tttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagac 193  Q
    |||||| |||||||| |||||||||||||||||||||| |||||||||||||||  |||||||||||||    
T  34814647 tttacgtgtttcggtcgaaaaatcaaaataaatcgaaacttattcagaattctatgaaactttacagac 34814715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 315 - 431
Target Start/End: Original strand, 34815462 - 34815578
Alignment:
Q  315 acttattcaaaatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttatt 414  Q
    ||||||||| ||||| |||||||||| |||||||||||||||||||| ||||||||| ||| ||||||||||||| |||  || ||| | ||||||||||    
T  34815462 acttattcagaatgttacgaaacttttcacatcatctatatgtatttttatagaggtgtctgtaaagtttcgtagaattctgaataactttcgatttatt 34815561  T
Q  415 ttgatttttcaaccgaa 431  Q
    |||||||||| ||||||    
T  34815562 ttgatttttctaccgaa 34815578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 141 - 253
Target Start/End: Complemental strand, 48899811 - 48899699
Alignment:
Q  141 gaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccataaaagtacatatagatgatgtgaatagtttcttaacatt 240  Q
    |||||||||||||||||| ||| ||||| |||||||||| ||| |||||  || |||| |||||| ||||||||||||||||||| |||||| |||||||    
T  48899811 gaaaaatcaaaataaatcaaaacttatttagaattctacgaaattttacctacacctctataaaaatacatatagatgatgtgaaaagtttcgtaacatt 48899712  T
Q  241 ccgaataagtctt 253  Q
    || ||||||||||    
T  48899711 ccaaataagtctt 48899699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 125 - 252
Target Start/End: Complemental strand, 45423210 - 45423083
Alignment:
Q  125 tttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccataaaagtacatatagatgatgtga 224  Q
    ||||||| ||||| | |||||||||||||||||| ||| | ||||| |||||||  ||||||||||||| |||| | |||| |||||||||||||| |||    
T  45423210 tttacgcatttcgttcgaaaaatcaaaataaatctaaactcattcaaaattctatgaaactttacagacacctctacaaaaatacatatagatgatatga 45423111  T
Q  225 atagtttcttaacattccgaataagtct 252  Q
    | |||||| || ||||||||||||||||    
T  45423110 aaagtttcgtaccattccgaataagtct 45423083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 325 - 431
Target Start/End: Original strand, 51936407 - 51936513
Alignment:
Q  325 aatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttattttgatttttc 424  Q
    ||||| |||||||||| ||||||||||||||||||||  |||||||| ||| ||||||||||||| |||  || ||| | ||||||||||||||||||||    
T  51936407 aatgttacgaaacttttcacatcatctatatgtattttcatagaggtgtctgtaaagtttcgtagaattctgaataactttcgatttattttgatttttc 51936506  T
Q  425 aaccgaa 431  Q
     ||||||    
T  51936507 taccgaa 51936513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 134 - 250
Target Start/End: Original strand, 51936213 - 51936329
Alignment:
Q  134 ttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccataaaagtacatatagatgatgtgaatagtttct 233  Q
    |||||| |||||||||||||||||||||| ||| ||  ||| |||| |||||||| |||| |||| ||| || ||||||||||||||||| | ||||||     
T  51936213 ttcggtcgaaaaatcaaaataaatcgaaacttagtcgaaatgctacgaaactttatagacacctctatataaatacatatagatgatgtgcaaagtttcg 51936312  T
Q  234 taacattccgaataagt 250  Q
    ||||||||| |||||||    
T  51936313 taacattccaaataagt 51936329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 123 - 193
Target Start/End: Complemental strand, 7999288 - 7999218
Alignment:
Q  123 attttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagac 193  Q
    ||||||||||||| |||  ||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  7999288 attttacgcgttttggtcaaaaaatcaaaataaatcgaaacttattcagaattctacaaaactttagagac 7999218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 134 - 250
Target Start/End: Complemental strand, 7998658 - 7998542
Alignment:
Q  134 ttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccataaaagtacatatagatgatgtgaatagtttct 233  Q
    |||||| ||||||| |||||||||||  | ||| ||  ||| |||| |||||||||| || |||| |||||| ||||||||||||||||| | ||||||     
T  7998658 ttcggtcgaaaaattaaaataaatcgtgacttagtcgaaatgctacgaaactttacacacacctctataaaaatacatatagatgatgtgcaaagtttcg 7998559  T
Q  234 taacattccgaataagt 250  Q
    |||||||||||||||||    
T  7998558 taacattccgaataagt 7998542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 134 - 250
Target Start/End: Original strand, 34815281 - 34815397
Alignment:
Q  134 ttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccataaaagtacatatagatgatgtgaatagtttct 233  Q
    |||||| |||||||||||||||||||| | ||| ||  ||| |||| |||||||| |||| |||| ||| || ||||||||||||||||||| ||| |      
T  34815281 ttcggtcgaaaaatcaaaataaatcgagacttagtcgaaatgctacgaaactttatagacacctctatataaatacatatagatgatgtgaaaagtattg 34815380  T
Q  234 taacattccgaataagt 250  Q
    |||||||||||||||||    
T  34815381 taacattccgaataagt 34815397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 325 - 423
Target Start/End: Complemental strand, 47356505 - 47356407
Alignment:
Q  325 aatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttattttgattttt 423  Q
    ||||| |||||||||||||||||| |||||| ||||| |||||||||||||||||| |||||| | |||  || ||| | | |||||||||||||||||    
T  47356505 aatgttacgaaactttgcacatcacctatatatatttttatagaggtatctataaaatttcgttgaattctgaataaattttgatttattttgattttt 47356407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 315 - 424
Target Start/End: Complemental strand, 7998473 - 7998365
Alignment:
Q  315 acttattcaaaatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttatt 414  Q
    ||||||||  ||||| |||||| ||| |||||||||||||||||||| ||||||||| | | ||||||||||||| |||  || ||| | ||||||||||    
T  7998473 acttattcggaatgttacgaaatttt-cacatcatctatatgtatttttatagaggtgtgtgtaaagtttcgtagaattctgaataaatttcgatttatt 7998375  T
Q  415 ttgatttttc 424  Q
    ||||||||||    
T  7998374 ttgatttttc 7998365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 47356690 - 47356581
Alignment:
Q  141 gaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccataaaagtacatatagatgatgtgaatagtttcttaacatt 240  Q
    ||||||||||||||||||||   ||| ||  ||| ||||||||||||| |||| |||| |||||| ||||||||||||||||| | |||||  |||||||    
T  47356690 gaaaaatcaaaataaatcgaggcttagtcgaaatgctacaaaactttatagacacctctataaaaatacatatagatgatgtgcaaagttttgtaacatt 47356591  T
Q  241 ccgaataagt 250  Q
    || |||||||    
T  47356590 ccaaataagt 47356581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 331 - 431
Target Start/End: Complemental strand, 6131790 - 6131689
Alignment:
Q  331 acgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgac-taagtctcgatttattttgatttttcaaccg 429  Q
    ||||||||||||| ||| |||||||||||||  |||||||| |||| | |||| | || |||||||||  |||||| |||||||||||||||||| ||||    
T  6131790 acgaaactttgcagatcctctatatgtattttaatagaggtgtctacatagttccataccatttcgacaaaagtcttgatttattttgatttttcgaccg 6131691  T
Q  430 aa 431  Q
    ||    
T  6131690 aa 6131689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 331 - 424
Target Start/End: Original strand, 45423101 - 45423194
Alignment:
Q  331 acgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttattttgatttttc 424  Q
    |||||||||| || ||||||||||||||||| | ||||||| ||| ||||||||| ||| |||| || | ||| | ||||||||||||||||||    
T  45423101 acgaaacttttcatatcatctatatgtatttttgtagaggtgtctgtaaagtttcatagaattttgaatgagtttagatttattttgatttttc 45423194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 325 - 424
Target Start/End: Original strand, 48899712 - 48899811
Alignment:
Q  325 aatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttattttgatttttc 424  Q
    ||||| |||||||||| |||||||||||||||||||| ||||||||| |   |||| |||||||| |||   | ||||| | ||||||||||||||||||    
T  48899712 aatgttacgaaacttttcacatcatctatatgtatttttatagaggtgtaggtaaaatttcgtagaattctaaataagttttgatttattttgatttttc 48899811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 123 - 193
Target Start/End: Complemental strand, 47357365 - 47357295
Alignment:
Q  123 attttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagac 193  Q
    |||||||||||||||||  |||||  |||||||||||||| ||||| |||||||||| |||||||| ||||    
T  47357365 attttacgcgtttcggtcaaaaaaataaaataaatcgaaacttatttagaattctacgaaactttatagac 47357295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 48899602 - 48899549
Alignment:
Q  200 ataaaagtacatatagatgatgtgaatagtttcttaacattccgaataagtctt 253  Q
    |||||| ||||||||||||||||||| |||||| ||||||||| ||||||||||    
T  48899602 ataaaaatacatatagatgatgtgaaaagtttcgtaacattccaaataagtctt 48899549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 362 - 448
Target Start/End: Complemental strand, 6131489 - 6131404
Alignment:
Q  362 atatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttattttgatttttcaaccgaactatgcaaaattgcaat 448  Q
    ||||||||| |||||||||||| |||| |||||||| |||| |||||||| |||||||||||  ||||||    |||||||||||||    
T  6131489 atatagagg-atctataaagttccgtaacatttcgagtaagcctcgatttgttttgattttttgaccgaaacgcgcaaaattgcaat 6131404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 123 - 193
Target Start/End: Original strand, 48899035 - 48899105
Alignment:
Q  123 attttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagac 193  Q
    ||||||| | ||||| | |||||||||||||||||| ||| | |||||||||||||| ||| |||||||||    
T  48899035 attttacacctttcgatcgaaaaatcaaaataaatcaaaactcattcagaattctacgaaaatttacagac 48899105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 378 - 431
Target Start/End: Complemental strand, 45423110 - 45423057
Alignment:
Q  378 aaagtttcgtagcatttcgactaagtctcgatttattttgatttttcaaccgaa 431  Q
    ||||||||||| |||| ||| ||||||||||||||||||||| |||| ||||||    
T  45423110 aaagtttcgtaccattccgaataagtctcgatttattttgatatttcgaccgaa 45423057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 325 - 369
Target Start/End: Original strand, 48899562 - 48899606
Alignment:
Q  325 aatgtcacgaaactttgcacatcatctatatgtatttatatagag 369  Q
    ||||| |||||||||| |||||||||||||||||||| |||||||    
T  48899562 aatgttacgaaacttttcacatcatctatatgtatttttatagag 48899606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 431
Target Start/End: Original strand, 5865849 - 5865908
Alignment:
Q  372 atctataaagtttcgtagcatttcgactaagtctcgatttattttgatttttcaaccgaa 431  Q
    ||||| |||||| |||| |||| |||||||| ||| ||||||||||||||||| ||||||    
T  5865849 atctaaaaagttccgtaacattccgactaagcctcaatttattttgatttttcgaccgaa 5865908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 367 - 442
Target Start/End: Complemental strand, 34089729 - 34089655
Alignment:
Q  367 gaggtatctataaagtttcgtagcatttcgactaagtctcgatttattttgatttttcaaccgaactatgcaaaat 442  Q
    ||||||| | ||||||||||| ||||| | ||||||| || ||||||||||||||||| |||||||  ||||||||    
T  34089729 gaggtatttgtaaagtttcgt-gcattccaactaagtatcaatttattttgatttttcgaccgaaccttgcaaaat 34089655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 29 - 109
Target Start/End: Complemental strand, 45423315 - 45423238
Alignment:
Q  29 agttaactgtctctggcatataagccgacagttaactgccgctggctcctccagaggcagttaactcccgctggctttgct 109  Q
    |||||||||||||||||||||  | |  |||||||||||||||||   | ||||||| |||||||| || |||||||||||    
T  45423315 agttaactgtctctggcatatccggcatcagttaactgccgctgg---ccccagaggtagttaactgcctctggctttgct 45423238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 117 - 158
Target Start/End: Original strand, 6131672 - 6131713
Alignment:
Q  117 attataattttacgcgtttcggtagaaaaatcaaaataaatc 158  Q
    ||||||||||| || |||||||| ||||||||||||||||||    
T  6131672 attataattttgcgtgtttcggtcgaaaaatcaaaataaatc 6131713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 431
Target Start/End: Original strand, 25484269 - 25484301
Alignment:
Q  399 taagtctcgatttattttgatttttcaaccgaa 431  Q
    |||||||||||||||||||||||||| ||||||    
T  25484269 taagtctcgatttattttgatttttcgaccgaa 25484301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 379 - 431
Target Start/End: Original strand, 34089748 - 34089800
Alignment:
Q  379 aagtttcgtagcatttcgactaagtctcgatttattttgatttttcaaccgaa 431  Q
    ||||| ||||||||||||| |||| || || |||||||||||||||| |||||    
T  34089748 aagttccgtagcatttcgaataagccttgaattattttgatttttcagccgaa 34089800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 179; Significance: 2e-96; HSPs: 6)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 84 - 448
Target Start/End: Original strand, 127299 - 127666
Alignment:
Q  84 ggcagttaactcccgctggctttgctactttttattataattttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaa 183  Q
    ||||||||||| |||||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  127299 ggcagttaactgccgctggctttgctgctttttattatgattctacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaa 127398  T
Q  184 ctttacagacgcctccataaaagtacatatagatgatgtgaatagtttcttaacattccgaataagtc-----ttattttannnnnnnccgaccgaaacg 278  Q
    ||||||| || |||| |||||| ||||||||||||||||||| |||||  ||||||||||||||||||     ||||||||        ||||||||| |    
T  127399 ctttacatacacctctataaaaatacatatagatgatgtgaaaagttttgtaacattccgaataagtctcgatttattttatttttt--cgaccgaaatg 127496  T
Q  279 cacaaaatcgcaattgnnnnnnnnnnnnnntccgacacttattcaaaatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatctata 378  Q
    | ||||||||||||||                ||| |||||||   ||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||    
T  127497 cgcaaaatcgcaattgaaaaaataaaaaaaaacgaaacttatttggaatgttacgaaactttgcacatcatctatatgtatttatatagaggtgtctcta 127596  T
Q  379 aagtttcgtagcatttcgactaagtctcgatttattttgatttttcaaccgaactatgcaaaattgcaat 448  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  127597 aagtttcgtagcaattcgactaagtctcgatttattttgatttttcaaccgaaccatgcaaaatcgcaat 127666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 315 - 431
Target Start/End: Complemental strand, 127465 - 127349
Alignment:
Q  315 acttattcaaaatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttatt 414  Q
    ||||||||  ||||| || ||||||| |||||||||||||||||||| ||||||||| | | |||||||| |||| |||  || ||| | ||||||||||    
T  127465 acttattcggaatgttacaaaacttttcacatcatctatatgtatttttatagaggtgtatgtaaagttttgtagaattctgaataactttcgatttatt 127366  T
Q  415 ttgatttttcaaccgaa 431  Q
    |||||||||| ||||||    
T  127365 ttgatttttctaccgaa 127349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 134 - 250
Target Start/End: Complemental strand, 127649 - 127533
Alignment:
Q  134 ttcggtagaaaaatcaaaataaatcgaaagttattcagaatt-ctacaaaactttacagacgcctccataaaagtacatatagatgatgtgaatagtttc 232  Q
    |||||| |||||||||||||||||||| | ||| || ||||| |||| |||||||| |||| |||| ||| || ||||||||||||||||| | ||||||    
T  127649 ttcggttgaaaaatcaaaataaatcgagacttagtc-gaattgctacgaaactttagagacacctctatataaatacatatagatgatgtgcaaagtttc 127551  T
Q  233 ttaacattccgaataagt 250  Q
     ||||||||| |||||||    
T  127550 gtaacattccaaataagt 127533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 23 - 86
Target Start/End: Complemental strand, 130549 - 130486
Alignment:
Q  23 agcgttagttaactgtctctggcatataagccgacagttaactgccgctggctcctccagaggc 86  Q
    |||| ||||||||||||||| ||||||  |||  ||||||||||||||||| ||||||||||||    
T  130549 agcggtagttaactgtctctagcatatgcgccagcagttaactgccgctggttcctccagaggc 130486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 75
Target Start/End: Original strand, 127265 - 127319
Alignment:
Q  21 ccagcgttagttaactgtctctggcatataagccgacagttaactgccgctggct 75  Q
    |||||| |||||||||| |||||||||||  |||| |||||||||||||||||||    
T  127265 ccagcggtagttaactgcctctggcatatgtgccggcagttaactgccgctggct 127319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 362 - 424
Target Start/End: Original strand, 128232 - 128293
Alignment:
Q  362 atatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttattttgatttttc 424  Q
    ||||||||| ||||||||||||| |||||||| | | |||| ||||||||||||||| |||||    
T  128232 atatagagg-atctataaagttttgtagcattccaaataagcctcgatttattttgagttttc 128293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 176; Significance: 1e-94; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 65 - 442
Target Start/End: Original strand, 38193455 - 38193832
Alignment:
Q  65 tgccgctggctcctccagaggcagttaactcccgctggctttgctactttttattataattttacgcgtttcggtagaaaaatcaaaataaatcgaaagt 164  Q
    |||||||||||||||||||||||||||| |  ||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  38193455 tgccgctggctcctccagaggcagttaattgtcgctggctttgctgctttttaatatgattttacgcgtttcggtagaaaaatcaaaataaatcgaaagt 38193554  T
Q  165 tattcagaattctacaaaactttacagacgcctccat-aaaagtacatatagatgatgtgaatagtttctt--aacattccgaataagtct-tattttan 260  Q
    ||||||||||||||| |||||||||| || |||| || |||| ||||||||||||||||||| |||||  |  ||||||||||||||||||  |||||      
T  38193555 tattcagaattctacgaaactttacaaacacctctataaaaaatacatatagatgatgtgaaaagttttgtaaaacattccgaataagtctcgatttt-- 38193652  T
Q  261 nnnnnnccgaccgaaacgcacaaaatcgcaattgnnnnnnnnnnnnnntccgacacttattcaaaatgtcacgaaactttgcacatcatctatatgtatt 360  Q
          ||||||||||||| ||||||||||||||              | |||||| |||||  ||||| |||||||||||||||||||||||||||| |    
T  38193653 -tttttccgaccgaaacgcgcaaaatcgcaattgaaaaaacaaaaaaat-cgacacatattcggaatgttacgaaactttgcacatcatctatatgtagt 38193750  T
Q  361 tatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttattttgatttttcaaccgaactatgcaaaat 442  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  38193751 tatatagaggtgtctataaagtttcgaagcatttcgactaagtctcgatttattttgatttttcgaccgaacgatgcaaaat 38193832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 84 - 448
Target Start/End: Original strand, 35142935 - 35143289
Alignment:
Q  84 ggcagttaactcccgctggctttgctactttttattataattttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaa 183  Q
    ||||||||||| |||||||||||||| |||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||    
T  35142935 ggcagttaactgccgctggctttgctgctttatattatgattttacgcgtttcggtagaaaaattaaaataaatcgaaagttattcagaattctacgaaa 35143034  T
Q  184 ctttacagacgcctccataaaagtacatatagatgatgtgaatagtttcttaacattccgaataagtcttattttannnnnnnccgaccgaaacgcacaa 283  Q
    ||||| |||| |||| |||||| |||||||||||||||| || |||||| |||||||||||||||||||  ||||        ||||||| ||||| |||    
T  35143035 ctttatagacacctctataaaaatacatatagatgatgtaaaaagtttcgtaacattccgaataagtctcgtttt-tttttttccgaccggaacgcgcaa 35143133  T
Q  284 aatcgcaattgnnnnnnnnnnnnnntccgacacttattcaaaatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtt 383  Q
    |||||||||||                ||||||||||||  ||||| |||||||||| |||||||||||    ||||||||||||||| |||||||||||    
T  35143134 aatcgcaattgaaaaaaaaaat-----cgacacttattcggaatgttacgaaacttttcacatcatcta----tatttatatagaggtgtctataaagtt 35143224  T
Q  384 tcgtagcatttcgactaagtctcgatttattttgatttttcaaccgaactatgcaaaattgcaat 448  Q
    ||||||||||| ||||||||||||||||||||| ||||||| ||||||| ||||||||| |||||    
T  35143225 tcgtagcattttgactaagtctcgatttattttaatttttcgaccgaaccatgcaaaatcgcaat 35143289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 77 - 448
Target Start/End: Complemental strand, 50911381 - 50910998
Alignment:
Q  77 ctccagaggcagttaactcccgctggctttgctactttttattataattttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattc 176  Q
    |||||||||||||||||| |||||| |||||||  |||||||||| ||||||||| ||||||||||||||| |||||||||||| |||||||||||||||    
T  50911381 ctccagaggcagttaactgccgctgactttgctgttttttattatgattttacgcatttcggtagaaaaattaaaataaatcgagagttattcagaattc 50911282  T
Q  177 tacaaaactttacagacgcctccataaaagtacatatagatgatgtgaatagtttcttaacattccgaataagtc----ttattttannnnnnnccgacc 272  Q
    ||| ||||||||||||| |||| |||||| |||||| |||||||||||| |||||| ||| |||| |||||||||    || ||||         ||| |    
T  50911281 tacgaaactttacagacacctctataaaaatacatagagatgatgtgaaaagtttcgtaatattctgaataagtctcgatttttttttattttttcgaac 50911182  T
Q  273 gaaacgcacaaaatcgcaattgnnnnnnnnnnnnnntccgacacttattcaaaatgtcacgaaactttgcacatcatctata--------tgtatttata 364  Q
     |||||| ||||||||||||||                |||||||||||| |||| | ||||||||||||||||||||||||        ||||||||||    
T  50911181 aaaacgcgcaaaatcgcaattgaaaaaattaaaaaaatcgacacttattcgaaattttacgaaactttgcacatcatctatatgtattattgtatttata 50911082  T
Q  365 tagaggtatctataaagtttcgtagcatttcgactaagtctcgatttattttgatttttcaaccgaactatgcaaaattgcaat 448  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  50911081 tagaggtgtctataaagtttcgtagcatttcgactaagtctcgatttattttgatttttcgaccgaaccatgcaaaattgcaat 50910998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 58 - 252
Target Start/End: Complemental strand, 11015507 - 11015314
Alignment:
Q  58 agttaactgccgctggctcctccagaggcagttaactcccgctggctttgctactttttattataattttacgcgtttcggtagaaaaatcaaaataaat 157  Q
    ||||||||||||||||||||||||||||||||||||| ||| || ||||||| |||||||||||||||||| ||||||| |||||||||||||||| |||    
T  11015507 agttaactgccgctggctcctccagaggcagttaactgccgttgactttgctgctttttattataattttatgcgtttcagtagaaaaatcaaaat-aat 11015409  T
Q  158 cgaaagttattcagaattctacaaaactttacagacgcctccataaaagtacatatagatgatgtgaatagtttcttaacattccgaataagtct 252  Q
    |||||||||||||||||||||| ||||||| ||||| |||| |||||| |||||||||||||| |||| |||||| ||||||| |||||||||||    
T  11015408 cgaaagttattcagaattctacgaaactttccagacacctctataaaaatacatatagatgatttgaaaagtttcgtaacatttcgaataagtct 11015314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 112 - 448
Target Start/End: Original strand, 52073618 - 52073949
Alignment:
Q  112 tttttattataattttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccataaaagtacat 211  Q
    |||||||||| |||||||| |||| ||| ||||||| ||||||||| ||||||||||||||||||||| |||||||||| ||  ||| |||||| || ||    
T  52073618 tttttattatgattttacgagttttggttgaaaaattaaaataaattgaaagttattcagaattctacgaaactttacatacatctctataaaaatatat 52073717  T
Q  212 atagatgatgtgaatagtttcttaacattccgaataagtctta--ttttannnnnnnccgaccgaaacgcacaaaatcgcaattgnnnnnnnnnnnnnnt 309  Q
    ||||||||| |||| |||||| ||||||||| ||||||||| |  ||||         |||||||||||||||||||||||||||                   
T  52073718 atagatgatatgaaaagtttcgtaacattccaaataagtctcaattttttttatttttcgaccgaaacgcacaaaatcgcaattgaaaaaaaat------ 52073811  T
Q  310 ccgacacttattcaaaatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgat 409  Q
     ||||||||||||  ||||| ||||||| ||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||| ||||||||||| ||    
T  52073812 -cgacacttattcggaatgttacgaaacattgcacatcatctatatgtatttttatagaggtgtctataaattttcgtagcattttgactaagtctcaat 52073910  T
Q  410 ttattttgatttttcaaccgaactatgcaaaattgcaat 448  Q
    ||||||||||||||| ||||||| ||||||||| |||||    
T  52073911 ttattttgatttttcgaccgaaccatgcaaaatcgcaat 52073949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 84 - 252
Target Start/End: Complemental strand, 40732417 - 40732249
Alignment:
Q  84 ggcagttaactcccgctggctttgctactttttattataattttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaa 183  Q
    ||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  40732417 ggcagttaactgccgctggctttgctactttttactatgattttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacgaaa 40732318  T
Q  184 ctttacagacgcctccataaaagtacatatagatgatgtgaatagtttcttaacattccgaataagtct 252  Q
    ||||| |||| |||| |||||| ||||||||||||||||||| |||||| ||||||||| |||||||||    
T  40732317 ctttatagacacctctataaaaatacatatagatgatgtgaaaagtttcataacattccaaataagtct 40732249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 17 - 193
Target Start/End: Original strand, 9617266 - 9617442
Alignment:
Q  17 acctccagcgttagttaactgtctctggcatataagccgacagttaactgccgctggctcctccagaggcagttaactcccgctggctttgctacttttt 116  Q
    ||||| |||| |||||||||| |||||||||||  |||| ||||||||||||||||||||||||||| |||||||||| ||||||||| |||| ||||||    
T  9617266 acctctagcggtagttaactgcctctggcatatgcgccggcagttaactgccgctggctcctccagatgcagttaactgccgctggctctgctgcttttt 9617365  T
Q  117 attataattttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagac 193  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||| |||||||||    
T  9617366 attatgattttacgcgtttcggtcgaaaaatcaaaataaatcgaaacttattcagaattctacgaaaatttacagac 9617442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 28 - 193
Target Start/End: Original strand, 11014368 - 11014533
Alignment:
Q  28 tagttaactgtctctggcatataagccgacagttaactgccgctggctcctccagaggcagttaactcccgctggctttgctactttttattataatttt 127  Q
    |||||||||| |||||||||||  |||| ||||||||||||||||||||||| |||||||||||||| |||||| ||||| | ||||||||||| |||||    
T  11014368 tagttaactgcctctggcatatgcgccggcagttaactgccgctggctcctctagaggcagttaactgccgctgcctttgatgctttttattatgatttt 11014467  T
Q  128 acgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagac 193  Q
    ||||||||| || |||||||||||||||||||||| |||||||||||||||| |||||||||||||    
T  11014468 acgcgtttcagtcgaaaaatcaaaataaatcgaaacttattcagaattctacgaaactttacagac 11014533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 123 - 442
Target Start/End: Complemental strand, 31433698 - 31433376
Alignment:
Q  123 attttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccataaaagtacatatagatgatgt 222  Q
    ||||||||||||||| |  ||||||||||||||||||||| | |||||||||||||  ||| |||||| || ||||||||||| ||||||||||||||||    
T  31433698 attttacgcgtttcgatcaaaaaatcaaaataaatcgaaactcattcagaattctatgaaattttacacacacctccataaaaatacatatagatgatgt 31433599  T
Q  223 gaatagtttcttaacattccgaataagtct---tattttannnnnnnccgaccgaaacgcacaaaatcgcaattgnnnnnnnnnnnnnntccgacactta 319  Q
    ||| |||||| |||||||||||||||||||   | |||          ||||| |||||| ||||||||||||||                || ||||||    
T  31433598 gaaaagtttcgtaacattccgaataagtctcgatttttgttattttttcgaccaaaacgcgcaaaatcgcaattgaaaaaataagaaaaatcgccactta 31433499  T
Q  320 ttcaaaatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttattttgat 419  Q
    ||  |||||  |||||||||| |||||||||||||||||||| ||||||||| ||| ||||||||||||||| |||||| |||||||| |||||||||||    
T  31433498 tttgaaatgatacgaaacttttcacatcatctatatgtatttttatagaggtgtctctaaagtttcgtagcacttcgaccaagtctcggtttattttgat 31433399  T
Q  420 ttttcaaccgaactatgcaaaat 442  Q
    ||||| ||||||| |||||||||    
T  31433398 ttttcgaccgaaccatgcaaaat 31433376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 311 - 448
Target Start/End: Complemental strand, 40732187 - 40732050
Alignment:
Q  311 cgacacttattcaaaatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatt 410  Q
    ||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  40732187 cgacacttattcggaatgttacgaaactttgcacatcatctatatgtatttatatagaggtgtctataaagtttcatagcatttcgactaagtctcgatt 40732088  T
Q  411 tattttgatttttcaaccgaactatgcaaaattgcaat 448  Q
    |||||||||||||| ||||||| ||||||||| |||||    
T  40732087 tattttgatttttcgaccgaaccatgcaaaatcgcaat 40732050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 311 - 448
Target Start/End: Complemental strand, 9618153 - 9618016
Alignment:
Q  311 cgacacttattcaaaatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatt 410  Q
    ||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||||    
T  9618153 cgacacttattcggaatgttacgaaactttgcacatcatctatatgtatttatatagatgtgtctataaagtttcttagcatttcgactaagtctcgatt 9618054  T
Q  411 tattttgatttttcaaccgaactatgcaaaattgcaat 448  Q
    |||||||||||||| ||||||| ||||||||| |||||    
T  9618053 tattttgatttttcgaccgaaccatgcaaaatcgcaat 9618016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 84 - 252
Target Start/End: Complemental strand, 9618381 - 9618217
Alignment:
Q  84 ggcagttaactcccgctggctttgctactttttattataattttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaa 183  Q
    ||||||||||| |||||| ||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||    
T  9618381 ggcagttaactgccgctgactttgctgctttttattttgattttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctaagaaa 9618282  T
Q  184 ctttacagacgcctccataaaagtacatatagatgatgtgaatagtttcttaacattccgaataagtct 252  Q
    ||||| |||| |||| |||||| |||||    ||||||| || |||||| |||||||||||||||||||    
T  9618281 ctttatagacacctctataaaaatacat----atgatgtcaaaagtttcgtaacattccgaataagtct 9618217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 311 - 448
Target Start/End: Complemental strand, 11015246 - 11015109
Alignment:
Q  311 cgacacttattcaaaatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatt 410  Q
    |||||| |||||  ||||| |||| ||||| |||||||||||||||||||||||||||||| |||||||||||| |||||||||| || |||||||||||    
T  11015246 cgacacgtattcggaatgttacgatacttttcacatcatctatatgtatttatatagaggtgtctataaagttttgtagcatttccacaaagtctcgatt 11015147  T
Q  411 tattttgatttttcaaccgaactatgcaaaattgcaat 448  Q
    |||||||||||||| ||||||| ||||||||| |||||    
T  11015146 tattttgatttttcgaccgaaccatgcaaaatcgcaat 11015109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 28 - 193
Target Start/End: Complemental strand, 35144026 - 35143861
Alignment:
Q  28 tagttaactgtctctggcatataagccgacagttaactgccgctggctcctccagaggcagttaactcccgctggctttgctactttttattataatttt 127  Q
    |||||||||| ||||| |||||  ||||  |||||||||| |||||||||  ||||||||||||||| |||||||||||| | ||||||||||   | ||    
T  35144026 tagttaactgcctctgacatatgcgccggtagttaactgcagctggctccatcagaggcagttaactgccgctggctttgttgctttttattaagttctt 35143927  T
Q  128 acgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagac 193  Q
    |||||||||||| |||||||||||||||||||||| |||||||||||||||| ||| |||||||||    
T  35143926 acgcgtttcggtggaaaaatcaaaataaatcgaaacttattcagaattctacgaaattttacagac 35143861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 315 - 442
Target Start/End: Complemental strand, 33437382 - 33437255
Alignment:
Q  315 acttattcaaaatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttatt 414  Q
    ||||||||  ||||| |||||||||| || ||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  33437382 acttattcggaatgttacgaaactttccatatcatatatatgtatttttatagaggtgtctataaagtttcgtagcatttcgactaagtctcaatttatt 33437283  T
Q  415 ttgatttttcaaccgaactatgcaaaat 442  Q
    |||||||||  ||||||| |||||||||    
T  33437282 ttgattttttgaccgaaccatgcaaaat 33437255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 84 - 193
Target Start/End: Original strand, 50910317 - 50910426
Alignment:
Q  84 ggcagttaactcccgctggctttgctactttttattataattttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaa 183  Q
    ||||||||||| ||||||||||||||  ||||||||| |||||||| ||||||||| |||||||||||||||||||||| |||||||||||||||| |||    
T  50910317 ggcagttaactgccgctggctttgctgttttttattacaattttactcgtttcggtcgaaaaatcaaaataaatcgaaatttattcagaattctacgaaa 50910416  T
Q  184 ctttacagac 193  Q
    ||||||||||    
T  50910417 ctttacagac 50910426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 83 - 193
Target Start/End: Complemental strand, 38194524 - 38194414
Alignment:
Q  83 aggcagttaactcccgctggctttgctactttttattataattttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaa 182  Q
    |||||||||||| ||||||||||||||  |||||||||| |||||| |||||| ||| ||||||||||||||||| |||| |||||||||||||||||||    
T  38194524 aggcagttaactgccgctggctttgctggtttttattatgattttatgcgttttggtcgaaaaatcaaaataaattgaaacttattcagaattctacaaa 38194425  T
Q  183 actttacagac 193  Q
    |||||||||||    
T  38194424 actttacagac 38194414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 84 - 191
Target Start/End: Original strand, 40731374 - 40731481
Alignment:
Q  84 ggcagttaactcccgctggctttgctactttttattataattttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaa 183  Q
    ||||||||||| |||||||||||||| ||||||||||| ||||||||| |||| || |||||||||||||||||||||| |||||||||||||||| |||    
T  40731374 ggcagttaactgccgctggctttgctgctttttattatgattttacgcatttcagtcgaaaaatcaaaataaatcgaaatttattcagaattctacgaaa 40731473  T
Q  184 ctttacag 191  Q
    | ||||||    
T  40731474 cattacag 40731481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 123 - 252
Target Start/End: Complemental strand, 33437579 - 33437450
Alignment:
Q  123 attttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccataaaagtacatatagatgatgt 222  Q
    ||||||||||||||||| ||||||||||||||||| |||| ||||||| |||||||| |||||||| |||| |||  |||||| ||||||||||||||||    
T  33437579 attttacgcgtttcggtcgaaaaatcaaaataaattgaaacttattcaaaattctacgaaactttatagacacctgtataaaaatacatatagatgatgt 33437480  T
Q  223 gaatagtttcttaacattccgaataagtct 252  Q
    |   |||||| |||||||||||||| ||||    
T  33437479 gctaagtttcgtaacattccgaatatgtct 33437450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 325 - 431
Target Start/End: Original strand, 33437462 - 33437568
Alignment:
Q  325 aatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttattttgatttttc 424  Q
    ||||| ||||||||| ||||||||||||||||||||| |||| |||| ||||||||||||||||| |||| || ||||| || |||||||||||||||||    
T  33437462 aatgttacgaaacttagcacatcatctatatgtatttttatacaggtgtctataaagtttcgtagaattttgaataagtttcaatttattttgatttttc 33437561  T
Q  425 aaccgaa 431  Q
     ||||||    
T  33437562 gaccgaa 33437568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 333 - 431
Target Start/End: Original strand, 40732269 - 40732367
Alignment:
Q  333 gaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttattttgatttttcaaccgaa 431  Q
    |||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||| |||  || ||| | |||||||||||||||||||| ||||||    
T  40732269 gaaacttttcacatcatctatatgtatttttatagaggtgtctataaagtttcgtagaattctgaataactttcgatttattttgatttttctaccgaa 40732367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 315 - 431
Target Start/End: Complemental strand, 35143101 - 35142985
Alignment:
Q  315 acttattcaaaatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttatt 414  Q
    ||||||||  ||||| ||||||||||  ||||||||||||||||||| ||||||||| ||||||||||||||||| |||  || ||| | ||||||||||    
T  35143101 acttattcggaatgttacgaaactttttacatcatctatatgtatttttatagaggtgtctataaagtttcgtagaattctgaataactttcgatttatt 35143002  T
Q  415 ttgatttttcaaccgaa 431  Q
    || ||||||| ||||||    
T  35143001 ttaatttttctaccgaa 35142985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 315 - 431
Target Start/End: Original strand, 50911208 - 50911324
Alignment:
Q  315 acttattcaaaatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttatt 414  Q
    ||||||||| ||| | |||||||||| |||||||||| ||||||||| ||||||||| ||| ||||||||||||| |||  || ||| ||||||||||||    
T  50911208 acttattcagaatattacgaaacttttcacatcatctctatgtatttttatagaggtgtctgtaaagtttcgtagaattctgaataactctcgatttatt 50911307  T
Q  415 ttgatttttcaaccgaa 431  Q
    || ||||||| ||||||    
T  50911308 ttaatttttctaccgaa 50911324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 21 - 162
Target Start/End: Complemental strand, 52074661 - 52074519
Alignment:
Q  21 ccagcgttagttaactgtctctggcatataagccgacagttaactgccgctggctcctccagaggcagttaactcccgctggctttgctacttttt-att 119  Q
    |||||| ||||||| ||||||||||||||  | |  ||||||| |||||||||||||| |||||| |||||| | ||  ||||||| || |||||| |||    
T  52074661 ccagcggtagttaattgtctctggcatatgcggctgcagttaattgccgctggctccttcagaggtagttaattgcctttggcttttctgcttttttatt 52074562  T
Q  120 ataattttacgcgtttcggtagaaaaatcaaaataaatcgaaa 162  Q
     | |||||||| |||||||| ||||||||||||||||| ||||    
T  52074561 ttgattttacgtgtttcggtcgaaaaatcaaaataaattgaaa 52074519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 331 - 431
Target Start/End: Original strand, 33437688 - 33437787
Alignment:
Q  331 acgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttattttgatttttcaaccga 430  Q
    ||||||||| ||||||||||||||||||||| |||| |||| ||||||||||||||||| ||||  |  |||| || ||||||||||||||||| |||||    
T  33437688 acgaaacttagcacatcatctatatgtatttttatacaggtgtctataaagtttcgtagaattt-taaaaagtttcaatttattttgatttttcgaccga 33437786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 123 - 223
Target Start/End: Complemental strand, 33437798 - 33437699
Alignment:
Q  123 attttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccataaaagtacatatagatgatgt 222  Q
    ||||||||||||||||| ||||||||||||||||| |||| || || | |||||||| |||||||| |||| |||  |||||| ||||||||||||||||    
T  33437798 attttacgcgtttcggtcgaaaaatcaaaataaattgaaactt-tttaaaattctacgaaactttatagacacctgtataaaaatacatatagatgatgt 33437700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 134 - 250
Target Start/End: Original strand, 40732067 - 40732183
Alignment:
Q  134 ttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccataaaagtacatatagatgatgtgaatagtttct 233  Q
    |||||| |||||||||||||||||||| | ||| ||  ||| |||  |||||||| |||| |||| ||| || ||||||||||||||||| | ||||||     
T  40732067 ttcggtcgaaaaatcaaaataaatcgagacttagtcgaaatgctatgaaactttatagacacctctatataaatacatatagatgatgtgcaaagtttcg 40732166  T
Q  234 taacattccgaataagt 250  Q
    |||||||||||||||||    
T  40732167 taacattccgaataagt 40732183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 134 - 250
Target Start/End: Complemental strand, 52073932 - 52073816
Alignment:
Q  134 ttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccataaaagtacatatagatgatgtgaatagtttct 233  Q
    |||||| ||||||||||||||||| || | ||| ||| ||| |||| ||| |||| |||| |||| |||||| ||||||||||||||||| |  |||||     
T  52073932 ttcggtcgaaaaatcaaaataaattgagacttagtcaaaatgctacgaaaatttatagacacctctataaaaatacatatagatgatgtgcaatgtttcg 52073833  T
Q  234 taacattccgaataagt 250  Q
    |||||||||||||||||    
T  52073832 taacattccgaataagt 52073816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 58 - 136
Target Start/End: Complemental strand, 55686253 - 55686175
Alignment:
Q  58 agttaactgccgctggctcctccagaggcagttaactcccgctggctttgctactttttattataattttacgcgtttc 136  Q
    |||||| || |||||||||||||| |||||||||||| ||| ||||||||||  |||||||||| ||||||||||||||    
T  55686253 agttaattgtcgctggctcctccataggcagttaactgccgttggctttgctgttttttattatgattttacgcgtttc 55686175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 134 - 247
Target Start/End: Original strand, 11015126 - 11015239
Alignment:
Q  134 ttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccataaaagtacatatagatgatgtgaatagtttct 233  Q
    |||||| |||||||||||||||||||| | ||  |   ||| ||||||||||||| |||| |||| ||| || ||||||||||||||||||| ||| ||     
T  11015126 ttcggtcgaaaaatcaaaataaatcgagactttgtggaaatgctacaaaactttatagacacctctatataaatacatatagatgatgtgaaaagtatcg 11015225  T
Q  234 taacattccgaata 247  Q
    ||||||||||||||    
T  11015226 taacattccgaata 11015239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 315 - 424
Target Start/End: Original strand, 11015316 - 11015424
Alignment:
Q  315 acttattcaaaatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttatt 414  Q
    |||||||| |||||| |||||||||| || ||||||||||||||||| ||||||||| |||  |||||||||||| |||  || ||| | |||| |||||    
T  11015316 acttattcgaaatgttacgaaacttttcaaatcatctatatgtatttttatagaggtgtctggaaagtttcgtagaattctgaataactttcga-ttatt 11015414  T
Q  415 ttgatttttc 424  Q
    ||||||||||    
T  11015415 ttgatttttc 11015424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 134 - 247
Target Start/End: Complemental strand, 38193821 - 38193708
Alignment:
Q  134 ttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccataaaagtacatatagatgatgtgaatagtttct 233  Q
    |||||| |||||||||||||||||||| | ||| ||  ||| || | |||||||| |||| |||| ||| || ||||||||||||||||| | ||||||     
T  38193821 ttcggtcgaaaaatcaaaataaatcgagacttagtcgaaatgcttcgaaactttatagacacctctatataactacatatagatgatgtgcaaagtttcg 38193722  T
Q  234 taacattccgaata 247  Q
    ||||||||||||||    
T  38193721 taacattccgaata 38193708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 134 - 250
Target Start/End: Original strand, 9618033 - 9618149
Alignment:
Q  134 ttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccataaaagtacatatagatgatgtgaatagtttct 233  Q
    |||||| |||||||||||||||||||| | ||| ||  ||| |||  |||||||| |||| | || ||| || ||||||||||||||||| | ||||||     
T  9618033 ttcggtcgaaaaatcaaaataaatcgagacttagtcgaaatgctaagaaactttatagacacatctatataaatacatatagatgatgtgcaaagtttcg 9618132  T
Q  234 taacattccgaataagt 250  Q
    |||||||||||||||||    
T  9618133 taacattccgaataagt 9618149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 118 - 193
Target Start/End: Original strand, 33436298 - 33436373
Alignment:
Q  118 ttataattttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagac 193  Q
    |||| ||||||||||||||||| |||||||||||||||||| ||| ||||| | |||||||| ||||| |||||||    
T  33436298 ttatgattttacgcgtttcggtcgaaaaatcaaaataaatcaaaacttattaataattctacgaaactatacagac 33436373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 134 - 250
Target Start/End: Complemental strand, 35143272 - 35143160
Alignment:
Q  134 ttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccataaaagtacatatagatgatgtgaatagtttct 233  Q
    |||||| ||||||| |||||||||||| | ||| ||| ||| |||| |||||||| |||| |||| ||| ||    |||||||||||||||| ||||||     
T  35143272 ttcggtcgaaaaattaaaataaatcgagacttagtcaaaatgctacgaaactttatagacacctctatataa----atatagatgatgtgaaaagtttcg 35143177  T
Q  234 taacattccgaataagt 250  Q
    |||||||||||||||||    
T  35143176 taacattccgaataagt 35143160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 334 - 431
Target Start/End: Complemental strand, 38193622 - 38193524
Alignment:
Q  334 aaactttgcacatcatctatatgtatttat-atagaggtatctataaagtttcgtagcatttcgactaagtctcgatttattttgatttttcaaccgaa 431  Q
    ||||||| |||||||||||||||||||| | |||||||| | | ||||||||||||| |||  || ||| | |||||||||||||||||||| ||||||    
T  38193622 aaacttttcacatcatctatatgtattttttatagaggtgtttgtaaagtttcgtagaattctgaataactttcgatttattttgatttttctaccgaa 38193524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 377 - 430
Target Start/End: Complemental strand, 2266502 - 2266449
Alignment:
Q  377 taaagtttcgtagcatttcgactaagtctcgatttattttgatttttcaaccga 430  Q
    ||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||    
T  2266502 taaagtttcttagcattccgactaagtctcgatttattttgttttttcaaccga 2266449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 315 - 423
Target Start/End: Original strand, 31433571 - 31433679
Alignment:
Q  315 acttattcaaaatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttatt 414  Q
    ||||||||  ||||| |||||||||| |||||||||||||||||||| ||| ||||| | | |||| |||| ||| |||  || | ||| ||||||||||    
T  31433571 acttattcggaatgttacgaaacttttcacatcatctatatgtatttttatggaggtgtgtgtaaaatttcatagaattctgaatgagtttcgatttatt 31433670  T
Q  415 ttgattttt 423  Q
    |||||||||    
T  31433671 ttgattttt 31433679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 142 - 250
Target Start/End: Original strand, 33437274 - 33437382
Alignment:
Q  142 aaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccataaaagtacatatagatgatgtgaatagtttcttaacattc 241  Q
    |||||||||||||||| || | ||| ||  ||| |||| |||||||| |||| |||| |||||| |||||||| ||||| || | |||||| ||||||||    
T  33437274 aaaaatcaaaataaattgagacttagtcgaaatgctacgaaactttatagacacctctataaaaatacatatatatgatatggaaagtttcgtaacattc 33437373  T
Q  242 cgaataagt 250  Q
    |||||||||    
T  33437374 cgaataagt 33437382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 352 - 431
Target Start/End: Original strand, 9618252 - 9618331
Alignment:
Q  352 atatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttattttgatttttcaaccgaa 431  Q
    |||||||||| ||||||||| ||||||||||||| ||| |||  || ||| | |||||||||||||||||||| ||||||    
T  9618252 atatgtatttttatagaggtgtctataaagtttcttagaattctgaataactttcgatttattttgatttttctaccgaa 9618331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 123 - 193
Target Start/End: Original strand, 31432747 - 31432817
Alignment:
Q  123 attttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagac 193  Q
    ||||||||  ||||||| ||||||| |||||||||  ||| |||||||||||||||| |||||||||||||    
T  31432747 attttacgtatttcggtcgaaaaattaaaataaattaaaatttattcagaattctacgaaactttacagac 31432817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 349 - 403
Target Start/End: Complemental strand, 35218790 - 35218736
Alignment:
Q  349 tctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagt 403  Q
    ||||||||||||| ||||||||| ||| ||||||||||||||||||||| |||||    
T  35218790 tctatatgtatttttatagaggtgtctctaaagtttcgtagcatttcgagtaagt 35218736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 335 - 424
Target Start/End: Complemental strand, 42577481 - 42577392
Alignment:
Q  335 aactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttattttgatttttc 424  Q
    ||||||||| ||| ||||||||||||| ||||||||  | |  ||||||  ||| |||| |||||||||||| |||||||||||||||||    
T  42577481 aactttgcagatcctctatatgtatttttatagaggattatgcaaagttctgtaacattccgactaagtctcaatttattttgatttttc 42577392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 123 - 188
Target Start/End: Complemental strand, 46641531 - 46641466
Alignment:
Q  123 attttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaacttta 188  Q
    |||||||| ||||||||  ||||||||||||||||||||| |||||| |||| |||| ||||||||    
T  46641531 attttacgtgtttcggtcaaaaaatcaaaataaatcgaaacttattcggaatcctacgaaacttta 46641466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 134 - 250
Target Start/End: Original strand, 31433387 - 31433503
Alignment:
Q  134 ttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccataaaagtacatatagatgatgtgaatagtttct 233  Q
    |||||| |||||||||||||||| ||| | ||  ||  | | |||| |||||||| |||| |||| |||||| ||||||||||||||||||| ||||||     
T  31433387 ttcggtcgaaaaatcaaaataaaccgagacttggtcgaagtgctacgaaactttagagacacctctataaaaatacatatagatgatgtgaaaagtttcg 31433486  T
Q  234 taacattccgaataagt 250  Q
    || |||| | |||||||    
T  31433487 tatcatttcaaataagt 31433503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 372 - 428
Target Start/End: Original strand, 51781962 - 51782018
Alignment:
Q  372 atctataaagtttcgtagcatttcgactaagtctcgatttattttgatttttcaacc 428  Q
    ||||||||||||| |||||||| |||||||| || |||||||||| |||||||||||    
T  51781962 atctataaagttttgtagcattgcgactaagccttgatttattttaatttttcaacc 51782018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 325 - 428
Target Start/End: Complemental strand, 52073746 - 52073643
Alignment:
Q  325 aatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttattttgatttttc 424  Q
    ||||| |||||||||| || ||||||||||| ||||| ||||||| | | | ||||||||||||| |||  || ||| | || ||||||||| |||||||    
T  52073746 aatgttacgaaacttttcatatcatctatatatatttttatagagatgtatgtaaagtttcgtagaattctgaataactttcaatttattttaatttttc 52073647  T
Q  425 aacc 428  Q
    ||||    
T  52073646 aacc 52073643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 122 - 160
Target Start/End: Original strand, 35218390 - 35218428
Alignment:
Q  122 aattttacgcgtttcggtagaaaaatcaaaataaatcga 160  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  35218390 aattttacgcggttcggtagaaaaatcaaaataaatcga 35218428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 75
Target Start/End: Complemental strand, 38194557 - 38194503
Alignment:
Q  21 ccagcgttagttaactgtctctggcatataagccgacagttaactgccgctggct 75  Q
    |||||| |||||||||| |||||||||||| || | |||||||||||||||||||    
T  38194557 ccagcggtagttaactgcctctggcatatacgcaggcagttaactgccgctggct 38194503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 423
Target Start/End: Original strand, 46641460 - 46641512
Alignment:
Q  371 tatctataaagtttcgtagcatttcgactaagtctcgatttattttgattttt 423  Q
    |||| |||||||||||||| ||| ||| ||||| |||||||||||||||||||    
T  46641460 tatccataaagtttcgtaggattccgaataagtttcgatttattttgattttt 46641512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 386 - 444
Target Start/End: Original strand, 29899014 - 29899072
Alignment:
Q  386 gtagcatttcgactaagtctcgatttattttgatttttcaaccgaactatgcaaaattg 444  Q
    |||||||| |||||| | ||| ||||||||||||||||||||| ||  |||||||||||    
T  29899014 gtagcattgcgactatgcctctatttattttgatttttcaaccaaaacatgcaaaattg 29899072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 378 - 448
Target Start/End: Complemental strand, 35218455 - 35218385
Alignment:
Q  378 aaagtttcgtagcatttcgactaagtctcgatttattttgatttttcaaccgaactatgcaaaattgcaat 448  Q
    |||||| || || ||| |||||||| ||||||||||||||||||||| |||||||   | |||||||||||    
T  35218455 aaagttccgcagtattccgactaagcctcgatttattttgatttttctaccgaaccgcgtaaaattgcaat 35218385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 9618408 - 9618364
Alignment:
Q  28 tagttaactgtctctggcatataagccgacagttaactgccgctg 72  Q
    |||||||||| |||||||||||  |||| ||||||||||||||||    
T  9618408 tagttaactgcctctggcatatgcgccggcagttaactgccgctg 9618364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 75
Target Start/End: Original strand, 35142903 - 35142955
Alignment:
Q  23 agcgttagttaactgtctctggcatataagccgacagttaactgccgctggct 75  Q
    |||| |||||||||| ||| |||||||  |||| |||||||||||||||||||    
T  35142903 agcggtagttaactgcctccggcatatgcgccggcagttaactgccgctggct 35142955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 75
Target Start/End: Complemental strand, 40732449 - 40732397
Alignment:
Q  23 agcgttagttaactgtctctggcatataagccgacagttaactgccgctggct 75  Q
    |||| |||||||||| |||| ||||||  |||| |||||||||||||||||||    
T  40732449 agcggtagttaactgcctctagcatatgcgccggcagttaactgccgctggct 40732397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 164; Significance: 2e-87; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 123 - 448
Target Start/End: Complemental strand, 17074614 - 17074288
Alignment:
Q  123 attttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccataaaagtacatatagatgatgt 222  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||| |||||| ||||||||||||||||    
T  17074614 attttacgcgtttcggtcgaaaaatcaaaataaatcgaaacttattcagaattctacgaaactttacagacacctctataaaaatacatatagatgatgt 17074515  T
Q  223 gaatagtttcttaacattccgaataagtcttattttannnnnnnccgaccgaaacgcacaaaatcgcaattg-nnnnnnnnnnnnnntccgacacttatt 321  Q
    ||| |||||||||||||||||||||||||||  |||        ||||||||||||| ||||||||||||||                 |||||||||||    
T  17074514 gaaaagtttcttaacattccgaataagtcttgatttttttttttccgaccgaaacgcgcaaaatcgcaattgaaaaaataaataaaaatcgacacttatt 17074415  T
Q  322 caaaatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttattttgattt 421  Q
    |  ||||| ||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  17074414 cggaatgttacgaaactttgcacatcatctatatgtatttttatagaggtttttataaagtttcgtagcatttcgactaagtctcgatttattttgattt 17074315  T
Q  422 ttcaaccgaactatgcaaaattgcaat 448  Q
    ||| ||| ||| ||||||||| |||||    
T  17074314 ttcgacctaaccatgcaaaatcgcaat 17074288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 86 - 253
Target Start/End: Complemental strand, 48098108 - 48097941
Alignment:
Q  86 cagttaactcccgctggctttgctactttttattataattttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaact 185  Q
    ||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  48098108 cagttaactgccgctggctttgctgctttttattatgattttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacgaaact 48098009  T
Q  186 ttacagacgcctccataaaagtacatatagatgatgtgaatagtttcttaacattccgaataagtctt 253  Q
    |||||||| |||| |||||| ||||||||||||||||||| |||||| ||||||||||||||||||||    
T  48098008 ttacagacacctctataaaaatacatatagatgatgtgaaaagtttcgtaacattccgaataagtctt 48097941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 29 - 252
Target Start/End: Complemental strand, 45266513 - 45266290
Alignment:
Q  29 agttaactgtctctggcatataagccgacagttaactgccgctggctcctccagaggcagttaactcccgctggctttgctactttttattataatttta 128  Q
    |||||| || |||||||||||  |||  ||||||||||||||||||||||||||| | |||||||| |||||||||||||| ||||||||||| ||||||    
T  45266513 agttaagtgcctctggcatatgcgccagcagttaactgccgctggctcctccagacgaagttaactgccgctggctttgctgctttttattatgatttta 45266414  T
Q  129 cgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccataaaagtacatatagatgatgtgaatag 228  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||| || |||| |||||| ||||||||||||||||| | ||    
T  45266413 cgcgtttcggtcgaaaaatcaaaataaatcgaaagttattaagaattctacgaaactttacaaacacctctataaaaatacatatagatgatgtgcaaag 45266314  T
Q  229 tttcttaacattccgaataagtct 252  Q
    |||| || |||| ||| |||||||    
T  45266313 tttcgtagcatttcgactaagtct 45266290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 86 - 252
Target Start/End: Complemental strand, 54922534 - 54922368
Alignment:
Q  86 cagttaactcccgctggctttgctactttttattataattttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaact 185  Q
    ||||||||| | |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  54922534 cagttaactgctgctggctttgctgctttttattatgattttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacgaaact 54922435  T
Q  186 ttacagacgcctccataaaagtacatatagatgatgtgaatagtttcttaacattccgaataagtct 252  Q
    |||||||| |||| |||||| ||||||||||||||||||| |||||| ||||||||| |||||||||    
T  54922434 ttacagacacctctataaaaatacatatagatgatgtgaaaagtttcgtaacattcctaataagtct 54922368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 23 - 193
Target Start/End: Original strand, 47641028 - 47641198
Alignment:
Q  23 agcgttagttaactgtctctggcatataagccgacagttaactgccgctggctcctccagaggcagttaactcccgctggctttgctactttttattata 122  Q
    |||| ||||||||||||||||||||||  |||| ||||||||||||| |||||||||||||||||||||||| |||||||||| | | |||||||||||     
T  47641028 agcggtagttaactgtctctggcatatgcgccggcagttaactgccgttggctcctccagaggcagttaactgccgctggcttcgatgctttttattatg 47641127  T
Q  123 attttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagac 193  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||||| |||||||| |||||||||||||    
T  47641128 attttacgcgtttcggtcgaaaaatcaaaataaatcgaaatttattcaaaattctacgaaactttacagac 47641198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 312 - 448
Target Start/End: Complemental strand, 47641902 - 47641766
Alignment:
Q  312 gacacttattcaaaatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgattt 411  Q
    |||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  47641902 gacacttattcggaatgttacgaaactttgcacatcatctatatgtatttatatagaggtgtctataaagtttcgtagcatttcgactaagtcttgattt 47641803  T
Q  412 attttgatttttcaaccgaactatgcaaaattgcaat 448  Q
    ||||||||||||| | ||||| ||||||||| |||||    
T  47641802 attttgatttttcgatcgaaccatgcaaaatcgcaat 47641766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 28 - 193
Target Start/End: Original strand, 48097409 - 48097574
Alignment:
Q  28 tagttaactgtctctggcatataagccgacagttaactgccgctggctcctccagaggcagttaactcccgctggctttgctactttttattataatttt 127  Q
    |||||||||| || || |||||  |||| ||| ||| ||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| |||||    
T  48097409 tagttaactgcctatgccatatgcgccggcaggtaagtgccgctggctcctcaagaggcagttaactaccgctggctttgctgctttttattatgatttt 48097508  T
Q  128 acgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagac 193  Q
    ||||||||||||| |||||||||||||||| |||| ||||||| |||||||| |||||||| ||||    
T  48097509 acgcgtttcggtaaaaaaatcaaaataaattgaaacttattcaaaattctacgaaactttatagac 48097574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 311 - 448
Target Start/End: Complemental strand, 54922309 - 54922172
Alignment:
Q  311 cgacacttattcaaaatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatt 410  Q
    ||||||||||||  || || |||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  54922309 cgacacttattcggaaagttacgaaactttgcacatcatctatacgtatttatatagaggtgtctataaagtttcatagcatttcgactaagtctcgatt 54922210  T
Q  411 tattttgatttttcaaccgaactatgcaaaattgcaat 448  Q
    |||||||||||||| || |||| ||||||||| |||||    
T  54922209 tattttgatttttcgactgaaccatgcaaaatcgcaat 54922172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 104 - 216
Target Start/End: Complemental strand, 47642723 - 47642611
Alignment:
Q  104 tttgctactttttattataattttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccataa 203  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| ||||    
T  47642723 tttgctgctttttattataattttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacgaaactttacataagcctctataa 47642624  T
Q  204 aagtacatataga 216  Q
    || ||||||||||    
T  47642623 aaatacatataga 47642611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 86 - 193
Target Start/End: Original strand, 54921499 - 54921608
Alignment:
Q  86 cagttaactcccgctggctttgctactttttattata--attttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaa 183  Q
    ||||||||| |||||| |||| || ||||||||||||  ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||    
T  54921499 cagttaactgccgctgactttactgctttttattatatgattttacgcgtttcggtcgaaaaatcaaaataaatcgaaacttattcagaattctacgaaa 54921598  T
Q  184 ctttacagac 193  Q
    ||||||||||    
T  54921599 ctttacagac 54921608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 103 - 193
Target Start/End: Original strand, 45265583 - 45265673
Alignment:
Q  103 ctttgctactttttattataattttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagac 193  Q
    ||||||| ||||||||| | ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||||||||||    
T  45265583 ctttgctgctttttattgtgattttacgcgtttcggtcgaaaaatcaaaataaatcgaaacttattcagaattctacgaaactttacagac 45265673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 315 - 431
Target Start/End: Original strand, 17074487 - 17074603
Alignment:
Q  315 acttattcaaaatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttatt 414  Q
    ||||||||  ||||| | |||||||| |||||||||||||||||||| ||||||||| ||| ||||||||||||| |||  || ||||| ||||||||||    
T  17074487 acttattcggaatgttaagaaacttttcacatcatctatatgtatttttatagaggtgtctgtaaagtttcgtagaattctgaataagtttcgatttatt 17074586  T
Q  415 ttgatttttcaaccgaa 431  Q
    |||||||||| ||||||    
T  17074587 ttgatttttcgaccgaa 17074603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 315 - 431
Target Start/End: Original strand, 48097944 - 48098060
Alignment:
Q  315 acttattcaaaatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttatt 414  Q
    ||||||||  ||||| |||||||||| |||||||||||||||||||| ||||||||| ||| ||||||||||||| |||  || ||| | ||||||||||    
T  48097944 acttattcggaatgttacgaaacttttcacatcatctatatgtatttttatagaggtgtctgtaaagtttcgtagaattctgaataactttcgatttatt 48098043  T
Q  415 ttgatttttcaaccgaa 431  Q
    |||||||||| ||||||    
T  48098044 ttgatttttctaccgaa 48098060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 378 - 448
Target Start/End: Complemental strand, 45266317 - 45266247
Alignment:
Q  378 aaagtttcgtagcatttcgactaagtctcgatttattttgatttttcaaccgaactatgcaaaattgcaat 448  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||    
T  45266317 aaagtttcgtagcatttcgactaagtctcgatttattttgatttttcgaccgaaccatgcaaaatcgcaat 45266247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 325 - 431
Target Start/End: Original strand, 54922380 - 54922486
Alignment:
Q  325 aatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttattttgatttttc 424  Q
    ||||| |||||||||| |||||||||||||||||||| ||||||||| ||| ||||||||||||| |||  || ||| | ||||||||||||||||||||    
T  54922380 aatgttacgaaacttttcacatcatctatatgtatttttatagaggtgtctgtaaagtttcgtagaattctgaataactttcgatttattttgatttttc 54922479  T
Q  425 aaccgaa 431  Q
     ||||||    
T  54922480 taccgaa 54922486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 331 - 431
Target Start/End: Original strand, 45266308 - 45266408
Alignment:
Q  331 acgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttattttgatttttcaaccga 430  Q
    ||||||||||||||||||||||||||||||| ||||||||| | | ||||||||||||| |||   | ||| | |||||||||||||||||||| |||||    
T  45266308 acgaaactttgcacatcatctatatgtatttttatagaggtgtttgtaaagtttcgtagaattcttaataactttcgatttattttgatttttcgaccga 45266407  T
Q  431 a 431  Q
    |    
T  45266408 a 45266408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 141 - 250
Target Start/End: Original strand, 17074312 - 17074421
Alignment:
Q  141 gaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccataaaagtacatatagatgatgtgaatagtttcttaacatt 240  Q
    |||||||||||||||||||| | ||| ||  ||| |||| |||||||| | |  |||| |||||| ||||||||||||||||| | |||||| |||||||    
T  17074312 gaaaaatcaaaataaatcgagacttagtcgaaatgctacgaaactttataaaaacctctataaaaatacatatagatgatgtgcaaagtttcgtaacatt 17074411  T
Q  241 ccgaataagt 250  Q
    ||||||||||    
T  17074412 ccgaataagt 17074421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 141 - 250
Target Start/End: Original strand, 47641790 - 47641899
Alignment:
Q  141 gaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccataaaagtacatatagatgatgtgaatagtttcttaacatt 240  Q
    |||||||||||||||||| | | ||| ||  ||| |||| |||||||| |||| |||| ||| || ||||||||||||||||| | |||||| |||||||    
T  47641790 gaaaaatcaaaataaatcaagacttagtcgaaatgctacgaaactttatagacacctctatataaatacatatagatgatgtgcaaagtttcgtaacatt 47641889  T
Q  241 ccgaataagt 250  Q
    ||||||||||    
T  47641890 ccgaataagt 47641899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 141 - 250
Target Start/End: Original strand, 54922196 - 54922305
Alignment:
Q  141 gaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccataaaagtacatatagatgatgtgaatagtttcttaacatt 240  Q
    |||||||||||||||||||| | ||| ||  ||| |||  |||||||| |||| |||| ||| || ||| ||||||||||||| | |||||| |||| ||    
T  54922196 gaaaaatcaaaataaatcgagacttagtcgaaatgctatgaaactttatagacacctctatataaatacgtatagatgatgtgcaaagtttcgtaacttt 54922295  T
Q  241 ccgaataagt 250  Q
    ||||||||||    
T  54922296 ccgaataagt 54922305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 209 - 252
Target Start/End: Complemental strand, 47642013 - 47641970
Alignment:
Q  209 catatagatgatgtgaatagtttcttaacattccgaataagtct 252  Q
    ||||||||||||||||| |||||| |||||||||||||||||||    
T  47642013 catatagatgatgtgaaaagtttcgtaacattccgaataagtct 47641970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 385 - 423
Target Start/End: Original strand, 37525677 - 37525715
Alignment:
Q  385 cgtagcatttcgactaagtctcgatttattttgattttt 423  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  37525677 cgtagtatttcgactaagtctcgatttattttgattttt 37525715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 349 - 431
Target Start/End: Original strand, 47642611 - 47642693
Alignment:
Q  349 tctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttattttgatttttcaaccgaa 431  Q
    ||||||||||||| ||||||||  | | ||||||||||||| |||  || ||| | |||||||||||||||||||| ||||||    
T  47642611 tctatatgtatttttatagaggcttatgtaaagtttcgtagaattctgaataactttcgatttattttgatttttctaccgaa 47642693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 75
Target Start/End: Complemental strand, 48098148 - 48098090
Alignment:
Q  17 acctccagcgttagttaactgtctctggcatataagccgacagttaactgccgctggct 75  Q
    |||||||||  |||||||||| ||||| |||||  ||||||||||||||||||||||||    
T  48098148 acctccagcagtagttaactgcctctgacatatgcgccgacagttaactgccgctggct 48098090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 377 - 442
Target Start/End: Complemental strand, 26267983 - 26267918
Alignment:
Q  377 taaagtttcgtagcatttcgactaagtctcgatttattttgatttttcaaccgaactatgcaaaat 442  Q
    ||||||||||| |||||  ||| ||||||||||||||||||||||||| ||| |||  ||||||||    
T  26267983 taaagtttcgtcgcattcagacgaagtctcgatttattttgatttttcgaccaaaccgtgcaaaat 26267918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 137 - 216
Target Start/End: Complemental strand, 2500982 - 2500903
Alignment:
Q  137 ggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccataaaagtacatataga 216  Q
    |||||||||||||| |||||| |||| |||||  |||| ||||||||||||||| || |||  |||||| | ||||||||    
T  2500982 ggtagaaaaatcaatataaattgaaacttattgggaatgctacaaaactttacatacacctttataaaaatgcatataga 2500903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 431
Target Start/End: Complemental strand, 47641207 - 47641139
Alignment:
Q  361 tatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttattttgatttttcaaccgaa 431  Q
    |||||||||||  || ||||||||||||| |||| || ||| | |||||||||||||||||||| ||||||    
T  47641207 tatatagaggt--ctgtaaagtttcgtagaattttgaataaatttcgatttattttgatttttcgaccgaa 47641139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 377 - 431
Target Start/End: Complemental strand, 45265668 - 45265614
Alignment:
Q  377 taaagtttcgtagcatttcgactaagtctcgatttattttgatttttcaaccgaa 431  Q
    ||||||||||||| |||  || ||||| |||||||||||||||||||| ||||||    
T  45265668 taaagtttcgtagaattctgaataagtttcgatttattttgatttttcgaccgaa 45265614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 377 - 423
Target Start/End: Complemental strand, 46507994 - 46507948
Alignment:
Q  377 taaagtttcgtagcatttcgactaagtctcgatttattttgattttt 423  Q
    ||||||||| ||||||| ||| |||||||| ||||||||||||||||    
T  46507994 taaagtttcatagcattccgaataagtctcaatttattttgattttt 46507948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 373 - 423
Target Start/End: Complemental strand, 48097573 - 48097523
Alignment:
Q  373 tctataaagtttcgtagcatttcgactaagtctcgatttattttgattttt 423  Q
    ||||||||||||||||| |||| || ||||| || ||||||||||||||||    
T  48097573 tctataaagtttcgtagaattttgaataagtttcaatttattttgattttt 48097523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 377 - 431
Target Start/End: Complemental strand, 54921603 - 54921549
Alignment:
Q  377 taaagtttcgtagcatttcgactaagtctcgatttattttgatttttcaaccgaa 431  Q
    ||||||||||||| |||  || ||||| |||||||||||||||||||| ||||||    
T  54921603 taaagtttcgtagaattctgaataagtttcgatttattttgatttttcgaccgaa 54921549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 142; Significance: 2e-74; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 87 - 448
Target Start/End: Original strand, 27641628 - 27641995
Alignment:
Q  87 agttaactcccgctggctttgctactttttattataattttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactt 186  Q
    |||||||| |||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||    
T  27641628 agttaactgccgctggctttgttgctttttattataattttacacgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacgacactt 27641727  T
Q  187 tacagacgcctccataaaagtacatatagatgatgtgaatagtttcttaacattccgaataagtc------ttattttannnnnnnccgaccgaaacgca 280  Q
    |||| || |||| |||||| ||||||||||||||||||| |||||| ||||||| ||||||||||      || ||||         ||||||||||||     
T  27641728 tacacacacctctataaaaatacatatagatgatgtgaaaagtttcgtaacatttcgaataagtctcgattttttttttaattttttcgaccgaaacgcg 27641827  T
Q  281 caaaatcgcaattgnnnnnnnnnnnnnntccgacacttattcaaaatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatctataaa 380  Q
    ||||||||||||||                ||| ||||||||  ||||| |||||| ||| ||||||||||||||||||||||||| |||| ||||||||    
T  27641828 caaaatcgcaattgaaaaaataaaaaaaatcgaaacttattcggaatgttacgaaaattttcacatcatctatatgtatttatataaaggtgtctataaa 27641927  T
Q  381 gtttcgtagcatttcgactaagtctcgatttattttgatttttcaaccgaactatgcaaaattgcaat 448  Q
     |||||||||||||| ||||| |||||||||||||| ||||||| || |||| ||||||||| |||||    
T  27641928 ttttcgtagcatttctactaaatctcgatttatttttatttttcgactgaaccatgcaaaatcgcaat 27641995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 28 - 252
Target Start/End: Original strand, 42000676 - 42000900
Alignment:
Q  28 tagttaactgtctctggcatataagccgacagttaactgccgctggctcctccagaggcagttaactcccgctggctttgctactttttattataatttt 127  Q
    |||||||||| |||||||||||  || | ||||||||||||||||||||||||||||| |||||||| || ||||||||||| ||||||||||| |||||    
T  42000676 tagttaactgcctctggcatatgcgctggcagttaactgccgctggctcctccagagggagttaactgcctctggctttgctgctttttattatgatttt 42000775  T
Q  128 acgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccataaaagtacatatagatgatgtgaata 227  Q
    ||||||||| || |||||||||||||||||| ||| |||||||||||||||| ||||||||| ||| |||| |||||| |||||||||||||||||||      
T  42000776 acgcgtttcagtcgaaaaatcaaaataaatcaaaatttattcagaattctacgaaactttacggacacctctataaaaatacatatagatgatgtgaaat 42000875  T
Q  228 gtttcttaacattccgaataagtct 252  Q
    ||||| ||||||||| |||||||||    
T  42000876 gtttcgtaacattccaaataagtct 42000900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 86 - 238
Target Start/End: Complemental strand, 2809197 - 2809045
Alignment:
Q  86 cagttaactcccgctggctttgctactttttattataattttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaact 185  Q
    ||||||||| ||| |||||| | | ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2809197 cagttaactgccgttggcttcgttgctttttattatgattttaagcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaact 2809098  T
Q  186 ttacagacgcctccataaaagtacatatagatgatgtgaatagtttcttaaca 238  Q
    ||| |||| |||| |||||| ||||||||||||||||||| |||||| |||||    
T  2809097 ttatagacacctctataaaaatacatatagatgatgtgaaaagtttcgtaaca 2809045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 315 - 442
Target Start/End: Original strand, 21543353 - 21543480
Alignment:
Q  315 acttattcaaaatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttatt 414  Q
    ||||||||| ||||| ||||||||||||||||| ||||||||||||| ||||||| | ||||||||||||||| ||||||||||||||||||||||||||    
T  21543353 acttattcagaatgttacgaaactttgcacatcctctatatgtatttttatagagatgtctataaagtttcgttgcatttcgactaagtctcgatttatt 21543452  T
Q  415 ttgatttttcaaccgaactatgcaaaat 442  Q
    |||||||||| ||||||| |||||||||    
T  21543453 ttgatttttcgaccgaaccatgcaaaat 21543480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 311 - 448
Target Start/End: Original strand, 42000964 - 42001101
Alignment:
Q  311 cgacacttattcaaaatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatt 410  Q
    |||||||||||   ||||  ||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||||||||||||||||    
T  42000964 cgacacttatttggaatggtacgaaactttgcacatcatctatatgtatttttatagagatgtctataaagtttcgtagcatttcgactaagtctcgatt 42001063  T
Q  411 tattttgatttttcaaccgaactatgcaaaattgcaat 448  Q
    |||||||||||||  ||||||| ||||||||| |||||    
T  42001064 tattttgattttttgaccgaaccatgcaaaatcgcaat 42001101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 28 - 192
Target Start/End: Complemental strand, 42001836 - 42001672
Alignment:
Q  28 tagttaactgtctctggcatataagccgacagttaactgccgctggctcctccagaggcagttaactcccgctggctttgctactttttattataatttt 127  Q
    |||||||||| || ||||||||  |||| ||||||||||||||| | |||||||||| || |||| | |||||||||||||| ||||||||  | |||||    
T  42001836 tagttaactgcctatggcatatgtgccggcagttaactgccgctagttcctccagagacaattaattgccgctggctttgctgctttttatcgtgatttt 42001737  T
Q  128 acgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacaga 192  Q
    |||||||| ||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  42001736 acgcgttttggtcgaaaaatcaaaataaatcgaaaattattcagaattctacgaaactttacaga 42001672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 334 - 448
Target Start/End: Original strand, 8815752 - 8815866
Alignment:
Q  334 aaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttattttgatttttcaaccgaact 433  Q
    ||||||||||||| |||||||||||||| |||||| || | ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||     
T  8815752 aaactttgcacataatctatatgtatttttatagaagtgtttataaagtttcgtagcatttcgactaagtctcgatttattttgatttttcgtccgaacc 8815851  T
Q  434 atgcaaaattgcaat 448  Q
    ||||||||| |||||    
T  8815852 atgcaaaatcgcaat 8815866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 338 - 442
Target Start/End: Complemental strand, 28427819 - 28427715
Alignment:
Q  338 tttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttattttgatttttcaaccgaactatgc 437  Q
    |||||| ||| ||||||||||||| ||||||||| ||| |||||||| |||||||| |||||||||||||||||||||||||||||| ||||||| ||||    
T  28427819 tttgcaaatcctctatatgtatttttatagaggtgtctgtaaagttttgtagcattacgactaagtctcgatttattttgatttttcgaccgaacaatgc 28427720  T
Q  438 aaaat 442  Q
    |||||    
T  28427719 aaaat 28427715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 331 - 447
Target Start/End: Complemental strand, 24536877 - 24536761
Alignment:
Q  331 acgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttattttgatttttcaaccga 430  Q
    |||||| |||||  ||| |||||||||||||  |||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||| |    
T  24536877 acgaaattttgcgaatcctctatatgtattttcatagaggtgtctataaagtttcgtagcattccgactaagtcttgatttattttgatttttcgaccaa 24536778  T
Q  431 actatgcaaaattgcaa 447  Q
    ||  |||||||| ||||    
T  24536777 accgtgcaaaatcgcaa 24536761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 331 - 431
Target Start/End: Original strand, 2809049 - 2809149
Alignment:
Q  331 acgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttattttgatttttcaaccga 430  Q
    |||||||||| |||||||||||||||||||| ||||||||| |||||||||||| |||| |||  || ||| | |||||||||||||||||||| |||||    
T  2809049 acgaaacttttcacatcatctatatgtatttttatagaggtgtctataaagttttgtagaattctgaataactttcgatttattttgatttttctaccga 2809148  T
Q  431 a 431  Q
    |    
T  2809149 a 2809149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 315 - 431
Target Start/End: Complemental strand, 27641791 - 27641675
Alignment:
Q  315 acttattcaaaatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttatt 414  Q
    |||||||| |||||| |||||||||| |||||||||||||||||||| ||||||||| | | |||||| |||||| |||  || ||| | ||||||||||    
T  27641791 acttattcgaaatgttacgaaacttttcacatcatctatatgtatttttatagaggtgtgtgtaaagtgtcgtagaattctgaataactttcgatttatt 27641692  T
Q  415 ttgatttttcaaccgaa 431  Q
    |||||||||| ||||||    
T  27641691 ttgatttttctaccgaa 27641675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 123 - 190
Target Start/End: Complemental strand, 8816496 - 8816429
Alignment:
Q  123 attttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttaca 190  Q
    ||||||||||||||||| ||||||||||||||||| |||| |||||||||||||||| ||||||||||    
T  8816496 attttacgcgtttcggtcgaaaaatcaaaataaattgaaacttattcagaattctacgaaactttaca 8816429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 364 - 447
Target Start/End: Complemental strand, 24536421 - 24536338
Alignment:
Q  364 atagaggtatctataaagtttcgtagcatttcgactaagtctcgatttattttgatttttcaaccgaactatgcaaaattgcaa 447  Q
    |||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||| |||  |||||||| ||||    
T  24536421 atagaggtgtctataaagtttcgtagcattccgactaagtcttgatttattttgatttttcgaccaaaccgtgcaaaatcgcaa 24536338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 84 - 190
Target Start/End: Complemental strand, 40678243 - 40678137
Alignment:
Q  84 ggcagttaactcccgctggctttgctactttttattataattttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaa 183  Q
    ||||||||||| ||| |   |||||| ||||||||||| ||||||| ||||| ||| |||||||||||||||||| ||| |||||||||||| ||| |||    
T  40678243 ggcagttaactgccgttaattttgctgctttttattatgattttacacgttttggtcgaaaaatcaaaataaatcaaaatttattcagaattttacgaaa 40678144  T
Q  184 ctttaca 190  Q
     ||||||    
T  40678143 ttttaca 40678137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 325 - 424
Target Start/End: Complemental strand, 42000888 - 42000789
Alignment:
Q  325 aatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttattttgatttttc 424  Q
    ||||| ||||||| || |||||||||||||||||||| ||||||||| ||  ||||||||||||| |||  || ||| | | ||||||||||||||||||    
T  42000888 aatgttacgaaacatttcacatcatctatatgtatttttatagaggtgtccgtaaagtttcgtagaattctgaataaattttgatttattttgatttttc 42000789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 123 - 193
Target Start/End: Complemental strand, 21544338 - 21544268
Alignment:
Q  123 attttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagac 193  Q
    ||||||||||||||| | |||| ||||||||||||||||| |||||| ||||| ||| |||||||||||||    
T  21544338 attttacgcgtttcgatcgaaatatcaaaataaatcgaaacttattcggaattttacgaaactttacagac 21544268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 123 - 193
Target Start/End: Complemental strand, 21544597 - 21544527
Alignment:
Q  123 attttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagac 193  Q
    ||||||||||||||| | |||| ||||||||||||||||| ||||||| |||| ||| |||||||||||||    
T  21544597 attttacgcgtttcgatcgaaatatcaaaataaatcgaaacttattcaaaattttacgaaactttacagac 21544527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 134 - 216
Target Start/End: Original strand, 28427726 - 28427808
Alignment:
Q  134 ttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccataaaagtacatataga 216  Q
    |||||| |||||||||||||||||||| | ||| ||  ||| |||||||||||||||||| |||| |||||| ||||||||||    
T  28427726 ttcggtcgaaaaatcaaaataaatcgagacttagtcgtaatgctacaaaactttacagacacctctataaaaatacatataga 28427808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 378 - 448
Target Start/End: Original strand, 33638882 - 33638952
Alignment:
Q  378 aaagtttcgtagcatttcgactaagtctcgatttattttgatttttcaaccgaactatgcaaaattgcaat 448  Q
    ||||||| |||||||| |||||| ||||||||||||||||||||||||||| ||  || ||||||||||||    
T  33638882 aaagttttgtagcattccgactatgtctcgatttattttgatttttcaaccaaaacatacaaaattgcaat 33638952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 134 - 251
Target Start/End: Complemental strand, 21543469 - 21543352
Alignment:
Q  134 ttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccataaaagtacatatagatgatgtgaatagtttct 233  Q
    |||||| |||||||||||||||||||| | ||| ||  ||| | || |||||||| ||||  ||| |||||| |||||||||| |||||| | ||||||     
T  21543469 ttcggtcgaaaaatcaaaataaatcgagacttagtcgaaatgcaacgaaactttatagacatctctataaaaatacatatagaggatgtgcaaagtttcg 21543370  T
Q  234 taacattccgaataagtc 251  Q
    |||||||| |||||||||    
T  21543369 taacattctgaataagtc 21543352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 142 - 250
Target Start/End: Complemental strand, 42001076 - 42000968
Alignment:
Q  142 aaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccataaaagtacatatagatgatgtgaatagtttcttaacattc 241  Q
    ||||||||||||||||||| | ||| ||  ||| |||| |||||||| ||||  ||| |||||| ||||||||||||||||| | |||||| || |||||    
T  42001076 aaaaatcaaaataaatcgagacttagtcgaaatgctacgaaactttatagacatctctataaaaatacatatagatgatgtgcaaagtttcgtaccattc 42000977  T
Q  242 cgaataagt 250  Q
    | |||||||    
T  42000976 caaataagt 42000968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 123 - 193
Target Start/End: Complemental strand, 14109805 - 14109735
Alignment:
Q  123 attttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagac 193  Q
    ||||||||||||||| | ||||||||||||| |||||||| ||||||  |||| ||| |||||||||||||    
T  14109805 attttacgcgtttcgatcgaaaaatcaaaatgaatcgaaacttattcgaaattttacgaaactttacagac 14109735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 123 - 193
Target Start/End: Complemental strand, 21544079 - 21544009
Alignment:
Q  123 attttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagac 193  Q
    |||||||| |||||| | |||| ||||||||||||||||| |||||| ||||| ||| |||||||||||||    
T  21544079 attttacgtgtttcgatcgaaatatcaaaataaatcgaaacttattcggaattttacgaaactttacagac 21544009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 349 - 427
Target Start/End: Complemental strand, 41396789 - 41396711
Alignment:
Q  349 tctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttattttgatttttcaac 427  Q
    ||||||||||||| ||||||| |  || |||||||| |||  |||| |||||||||||||||| |||||||||||||||    
T  41396789 tctatatgtatttttatagagttcgctgtaaagttttgtaaaattttgactaagtctcgatttgttttgatttttcaac 41396711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 373 - 428
Target Start/End: Complemental strand, 40862248 - 40862193
Alignment:
Q  373 tctataaagtttcgtagcatttcgactaagtctcgatttattttgatttttcaacc 428  Q
    |||| |||||||| |||||||||||||| | ||| |||||||||||||||||||||    
T  40862248 tctacaaagtttcatagcatttcgactatgcctccatttattttgatttttcaacc 40862193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 8815842 - 8815733
Alignment:
Q  141 gaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccataaaagtacatatagatgatgtgaatagtttcttaacatt 240  Q
    |||||||||||||||||||| | ||| ||  ||| |||| |||||||| | || | || |||||| ||||||||||| ||||| | |||||  |||||||    
T  8815842 gaaaaatcaaaataaatcgagacttagtcgaaatgctacgaaactttataaacacttctataaaaatacatatagattatgtgcaaagttttataacatt 8815743  T
Q  241 ccgaataagt 250  Q
    || |||||||    
T  8815742 ccaaataagt 8815733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 27641971 - 27641862
Alignment:
Q  141 gaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccataaaagtacatatagatgatgtgaatagtttcttaacatt 240  Q
    ||||||| |||||||||||| | ||| |   ||| |||| ||| |||| |||| |||  ||| || ||||||||||||||||||| | |||| |||||||    
T  27641971 gaaaaataaaaataaatcgagatttagtagaaatgctacgaaaatttatagacacctttatataaatacatatagatgatgtgaaaattttcgtaacatt 27641872  T
Q  241 ccgaataagt 250  Q
    ||||||||||    
T  27641871 ccgaataagt 27641862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 141 - 193
Target Start/End: Complemental strand, 14112927 - 14112875
Alignment:
Q  141 gaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagac 193  Q
    |||||||||||||||||||||| ||||||  |||| ||| |||||||||||||    
T  14112927 gaaaaatcaaaataaatcgaaacttattcgaaattttacgaaactttacagac 14112875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 377 - 424
Target Start/End: Original strand, 14112880 - 14112927
Alignment:
Q  377 taaagtttcgtagcatttcgactaagtctcgatttattttgatttttc 424  Q
    ||||||||||||  ||||||| ||||| ||||||||||||||||||||    
T  14112880 taaagtttcgtaaaatttcgaataagtttcgatttattttgatttttc 14112927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 75
Target Start/End: Complemental strand, 2809233 - 2809179
Alignment:
Q  21 ccagcgttagttaactgtctctggcatataagccgacagttaactgccgctggct 75  Q
    |||||| |||||||||| |||||| ||||  |||||||||||||||||| |||||    
T  2809233 ccagcggtagttaactgcctctgggatatgcgccgacagttaactgccgttggct 2809179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 362 - 424
Target Start/End: Complemental strand, 28427147 - 28427086
Alignment:
Q  362 atatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttattttgatttttc 424  Q
    ||||||||| ||||||||||||| |||||||| | | |||| ||||||||||||||| |||||    
T  28427147 atatagagg-atctataaagttttgtagcattccaaataagcctcgatttattttgagttttc 28427086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 378 - 424
Target Start/End: Complemental strand, 28991696 - 28991650
Alignment:
Q  378 aaagtttcgtagcatttcgactaagtctcgatttattttgatttttc 424  Q
    ||||| |||||||||| ||| |||| |||||||||||||||||||||    
T  28991696 aaagtgtcgtagcattccgaataagcctcgatttattttgatttttc 28991650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 75
Target Start/End: Original strand, 27641592 - 27641645
Alignment:
Q  22 cagcgttagttaactgtctctggcatataagccgacagttaactgccgctggct 75  Q
    ||||| |||||||||| ||| |||||||  ||||| ||||||||||||||||||    
T  27641592 cagcggtagttaactgcctcaggcatatgcgccgatagttaactgccgctggct 27641645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 447
Target Start/End: Complemental strand, 28296348 - 28296283
Alignment:
Q  382 tttcgtagcatttcgactaagtctcgatttattttgatttttcaaccgaactatgcaaaattgcaa 447  Q
    ||||||||||||  || |||||||||||||||| | ||||||||||| || | |||||||| ||||    
T  28296348 tttcgtagcattctgaataagtctcgatttattctcatttttcaaccaaaatgtgcaaaatcgcaa 28296283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 431
Target Start/End: Original strand, 28991999 - 28992052
Alignment:
Q  378 aaagtttcgtagcatttcgactaagtctcgatttattttgatttttcaaccgaa 431  Q
    |||||||||||| |||   |||||| ||||||||||||||||||||| ||||||    
T  28991999 aaagtttcgtagtattctaactaagcctcgatttattttgatttttcgaccgaa 28992052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 371 - 411
Target Start/End: Original strand, 28428114 - 28428154
Alignment:
Q  371 tatctataaagtttcgtagcatttcgactaagtctcgattt 411  Q
    ||||| ||||||||||||||||||| | |||||||||||||    
T  28428114 tatctgtaaagtttcgtagcatttcaaataagtctcgattt 28428154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 134; Significance: 1e-69; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 111 - 442
Target Start/End: Original strand, 25694190 - 25694524
Alignment:
Q  111 ctttttattataattttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccataaaagtaca 210  Q
    ||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||||| | |  |||||| ||||    
T  25694190 ctttttattatgattttacgcgttttggtcgaaaaatcaaaataaatcgaaagttattcagaattctacgaaattttacagacacgtatataaaaataca 25694289  T
Q  211 tatagatgatgtgaatagtttcttaacattccgaataagtct---tattttannnnnnnccgaccgaaacgcacaaaatcgcaattgnnnnnnnnnnnnn 307  Q
    ||||||||||||||| |||||| ||| |||||||||||||||   | ||||         |||||||||||| ||||||||||||||                 
T  25694290 tatagatgatgtgaaaagtttcgtaagattccgaataagtctcgattttttttattttttcgaccgaaacgcgcaaaatcgcaattgaaaaatttaaaaa 25694389  T
Q  308 ntccgacacttattcaaaatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcg 407  Q
        |||||||||||  ||||| || |||||||| ||||||||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||||    
T  25694390 aattgacacttattcggaatgttacaaaactttgtacatcatctatatgtatttttatagaggtgtttataaagtttcgtagcatttcgactaagtctcg 25694489  T
Q  408 atttattttgatttttcaaccgaactatgcaaaat 442  Q
    || |||||||||||||| ||||||| |||||||||    
T  25694490 atctattttgatttttcgaccgaaccatgcaaaat 25694524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 84 - 248
Target Start/End: Complemental strand, 48556869 - 48556705
Alignment:
Q  84 ggcagttaactcccgctggctttgctactttttattataattttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaa 183  Q
    ||||||||||| || ||| ||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| || ||| |||    
T  48556869 ggcagttaactgccactgactttgctgctttttattataatttaacgtgtttcggtagaaaaatcaaaataaatcgaaagttattcagatttttacgaaa 48556770  T
Q  184 ctttacagacgcctccataaaagtacatatagatgatgtgaatagtttcttaacattccgaataa 248  Q
    |||||||||| |||| |||||| ||||||||||||||||| | |||||| ||||||| |||||||    
T  48556769 ctttacagacacctctataaaaatacatatagatgatgtgcaaagtttcataacatttcgaataa 48556705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 311 - 442
Target Start/End: Original strand, 31602071 - 31602202
Alignment:
Q  311 cgacacttattcaaaatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatt 410  Q
    |||||||||||| |||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  31602071 cgacacttattcgaaatgttacgaaactttgcacatcatctatatgtatttttatagaggtgtctataaagtttcgtagcatttcgactaagtctcgatt 31602170  T
Q  411 tattttgatttttcaaccgaactatgcaaaat 442  Q
    |||||| ||||||| |||||||  ||||||||    
T  31602171 tatttttatttttcgaccgaaccgtgcaaaat 31602202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 311 - 448
Target Start/End: Complemental strand, 48556637 - 48556500
Alignment:
Q  311 cgacacttattcaaaatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatt 410  Q
    ||||||||||||  ||||| |||||| ||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||    
T  48556637 cgacacttattcggaatgttacgaaatttttcacatcatctatatgtatttatatagaggtgtctttaaagtttcgtagcatttcgactaagtctcaatt 48556538  T
Q  411 tattttgatttttcaaccgaactatgcaaaattgcaat 448  Q
    |||||||||||||| ||||||| |||||||||||||||    
T  48556537 tattttgatttttcgaccgaaccatgcaaaattgcaat 48556500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 147 - 447
Target Start/End: Original strand, 47610161 - 47610465
Alignment:
Q  147 tcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccataaaagtacatatagatgatgtgaatagtttcttaacattccgaat 246  Q
    |||||||||||||| | ||| ||  ||| |||||||||||||||||| |||| |||||| ||||||||||||||||||| |||||| ||||||||||||     
T  47610161 tcaaaataaatcgagacttagtcgaaatgctacaaaactttacagacacctctataaaaatacatatagatgatgtgaaaagtttcataacattccgaaa 47610260  T
Q  247 aagtct----tattttannnnnnnccgaccgaaacgcacaaaatcgcaattgnnnnnnnnnnnnnntccgacacttattcaaaatgtcacgaaactttgc 342  Q
    ||||||    | ||||         |||||||||||  |||| |||||||||                ||| ||||||||  ||| | |||||||||| |    
T  47610261 aagtctcgatttttttttattttttcgaccgaaacgagcaaagtcgcaattgaaaaagtacaaaaaatcgaaacttattcggaattttacgaaacttttc 47610360  T
Q  343 acatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttattttgatttttcaaccgaactatgcaaaat 442  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||||    
T  47610361 acatcatctatatgtatttttatagaggtgtctataaagtttcgtagcatttcgattaagtctcgattcattttgatttttcaaccgaaccatgcaaaat 47610460  T
Q  443 tgcaa 447  Q
     ||||    
T  47610461 cgcaa 47610465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 84 - 193
Target Start/End: Original strand, 14815451 - 14815560
Alignment:
Q  84 ggcagttaactcccgctggctttgctactttttattataattttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaa 183  Q
    ||||||||||| ||||| |||||||| ||||||||||| |||||||||||||||||  |||||||||||||||| |||| ||| ||||||||||||||||    
T  14815451 ggcagttaactgccgctagctttgctgctttttattatgattttacgcgtttcggtcaaaaaatcaaaataaattgaaacttactcagaattctacaaaa 14815550  T
Q  184 ctttacagac 193  Q
     |||||||||    
T  14815551 ttttacagac 14815560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 84 - 193
Target Start/End: Original strand, 15262446 - 15262555
Alignment:
Q  84 ggcagttaactcccgctggctttgctactttttattataattttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaa 183  Q
    ||||||||||| ||||| |||||||| ||||||||||| |||||||||||||||||  |||||||||||||||| |||| ||| ||||||||||||||||    
T  15262446 ggcagttaactgccgctagctttgctgctttttattatgattttacgcgtttcggtcaaaaaatcaaaataaattgaaacttactcagaattctacaaaa 15262545  T
Q  184 ctttacagac 193  Q
     |||||||||    
T  15262546 ttttacagac 15262555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 315 - 448
Target Start/End: Complemental strand, 22929409 - 22929276
Alignment:
Q  315 acttattcaaaatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttatt 414  Q
    ||||||||||||||  ||||||||||||||||| ||||||||||||  || |||| | ||| |||||||||||||||||  |||||||||| ||||||||    
T  22929409 acttattcaaaatgctacgaaactttgcacatcctctatatgtattgttacagagatgtctgtaaagtttcgtagcattcagactaagtctagatttatt 22929310  T
Q  415 ttgatttttcaaccgaactatgcaaaattgcaat 448  Q
    |||||||| | ||| ||| ||||||||| |||||    
T  22929309 ttgattttccgaccaaaccatgcaaaatcgcaat 22929276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 333 - 418
Target Start/End: Complemental strand, 47610246 - 47610161
Alignment:
Q  333 gaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttattttga 418  Q
    |||||||| |||||||||||||||||||| ||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||    
T  47610246 gaaacttttcacatcatctatatgtatttttatagaggtgtctgtaaagttttgtagcatttcgactaagtctcgatttattttga 47610161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 86 - 193
Target Start/End: Complemental strand, 31602890 - 31602782
Alignment:
Q  86 cagttaactcccgctggctttgctactttttattataattttacgcgtttcggtagaaaaatcaaaa-taaatcgaaagttattcagaattctacaaaac 184  Q
    ||||||||| ||||| |||||||| ||||||||| | |||||||||||||| || |||||| ||||| |||||||||| |||||||||||||||||||||    
T  31602890 cagttaactgccgctagctttgctgctttttattgtgattttacgcgtttcagtcgaaaaaacaaaaataaatcgaaacttattcagaattctacaaaac 31602791  T
Q  185 tttacagac 193  Q
    |||||||||    
T  31602790 tttacagac 31602782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 317 - 431
Target Start/End: Original strand, 48556705 - 48556819
Alignment:
Q  317 ttattcaaaatgtcacgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttatttt 416  Q
    |||||| |||||| | ||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||  | |  || ||| | ||||||||||||    
T  48556705 ttattcgaaatgttatgaaactttgcacatcatctatatgtatttttatagaggtgtctgtaaagtttcgtaaaaatctgaataactttcgatttatttt 48556804  T
Q  417 gatttttcaaccgaa 431  Q
    |||||||| ||||||    
T  48556805 gatttttctaccgaa 48556819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 350 - 423
Target Start/End: Original strand, 6038038 - 6038111
Alignment:
Q  350 ctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttattttgattttt 423  Q
    |||||||||||| ||||||| | ||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  6038038 ctatatgtatttttatagagttgtctgtaaagtttcgtagcatttcgattaagtctcgatttattttgattttt 6038111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 134 - 250
Target Start/End: Complemental strand, 47610449 - 47610333
Alignment:
Q  134 ttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccataaaagtacatatagatgatgtgaatagtttct 233  Q
    |||||| ||||||||||||| |||||| | ||| ||  ||| |||| |||||||| |||| |||| |||||| ||||||||||||||||||| ||||||     
T  47610449 ttcggttgaaaaatcaaaatgaatcgagacttaatcgaaatgctacgaaactttatagacacctctataaaaatacatatagatgatgtgaaaagtttcg 47610350  T
Q  234 taacattccgaataagt 250  Q
    ||| |||||||||||||    
T  47610349 taaaattccgaataagt 47610333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 134 - 250
Target Start/End: Complemental strand, 31602191 - 31602075
Alignment:
Q  134 ttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccataaaagtacatatagatgatgtgaatagtttct 233  Q
    |||||| ||||||| |||||||||||| | ||| ||  ||| |||| |||||||| |||| |||| |||||| ||||||||||||||||| | ||||||     
T  31602191 ttcggtcgaaaaataaaaataaatcgagacttagtcgaaatgctacgaaactttatagacacctctataaaaatacatatagatgatgtgcaaagtttcg 31602092  T
Q  234 taacattccgaataagt 250  Q
    ||||||| |||||||||    
T  31602091 taacatttcgaataagt 31602075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 134 - 250
Target Start/End: Original strand, 48556517 - 48556633
Alignment:
Q  134 ttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccataaaagtacatatagatgatgtgaatagtttct 233  Q
    |||||| ||||||||||||||||| || | ||| ||  ||| |||| |||||||| |||| |||| ||| || ||||||||||||||||||| | ||||     
T  48556517 ttcggtcgaaaaatcaaaataaattgagacttagtcgaaatgctacgaaactttaaagacacctctatataaatacatatagatgatgtgaaaaatttcg 48556616  T
Q  234 taacattccgaataagt 250  Q
    |||||||||||||||||    
T  48556617 taacattccgaataagt 48556633  T

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Target: chr7; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 335 - 433
Target Start/End: Original strand, 23939039 - 23939137
Alignment:
Q  335 aactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttattttgatttttcaaccgaact 433  Q
    ||||||||| ||| | ||| ||||||| ||| ||||| ||| |||||||||||| |||| |||  ||||||||||||||||||||||||||| ||||||    
T  23939039 aactttgcaaatcctttatttgtatttttatcgaggtgtctgtaaagtttcgtatcattccgatcaagtctcgatttattttgatttttcaagcgaact 23939137  T

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Target: chr7; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 102 - 176
Target Start/End: Complemental strand, 25695118 - 25695044
Alignment:
Q  102 gctttgctactttttattataattttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattc 176  Q
    |||||||| ||||||||| | ||||||||||||||||| |||||||||||||||||| ||| ||||||| |||||    
T  25695118 gctttgctgctttttattgtgattttacgcgtttcggtcgaaaaatcaaaataaatcaaaacttattcaaaattc 25695044  T

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Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 331 - 424
Target Start/End: Complemental strand, 25694313 - 25694220
Alignment:
Q  331 acgaaactttgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttattttgatttttc 424  Q
    |||||||||| |||||||||||||||||||| |||| | || ||| |||| |||||||| |||  || ||| | ||||||||||||||||||||    
T  25694313 acgaaacttttcacatcatctatatgtatttttatatacgtgtctgtaaaatttcgtagaattctgaataactttcgatttattttgatttttc 25694220  T

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Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 134 - 250
Target Start/End: Complemental strand, 25694513 - 25694397
Alignment:
Q  134 ttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccataaaagtacatatagatgatgtgaatagtttct 233  Q
    |||||| |||||||||||||| ||||| | ||| ||  ||| |||| |||||||| | || |||| |||||| ||||||||||||||||  | |||||      
T  25694513 ttcggtcgaaaaatcaaaatagatcgagacttagtcgaaatgctacgaaactttataaacacctctataaaaatacatatagatgatgtacaaagttttg 25694414  T
Q  234 taacattccgaataagt 250  Q
    |||||||||||||||||    
T  25694413 taacattccgaataagt 25694397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 340 - 424
Target Start/End: Complemental strand, 35248838 - 35248754
Alignment:
Q  340 tgcacatcatctatatgtatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttattttgatttttc 424  Q
    |||| ||| ||||||||||||| ||||||||| |||  ||||||  ||||||||  ||| |||||||||||||||||||||||||    
T  35248838 tgcagatcctctatatgtatttttatagaggtgtctcaaaagttatgtagcattctgaccaagtctcgatttattttgatttttc 35248754  T

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Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 123 - 190
Target Start/End: Original strand, 22929024 - 22929091
Alignment:
Q  123 attttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttaca 190  Q
    ||||||| ||||| |||  ||||||||||||||||||||| |||||||||||| ||| ||||||||||    
T  22929024 attttacacgttttggtcaaaaaatcaaaataaatcgaaacttattcagaattttacgaaactttaca 22929091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 28 - 90
Target Start/End: Original strand, 25694126 - 25694188
Alignment:
Q  28 tagttaactgtctctggcatataagccgacagttaactgccgctggctcctccagaggcagtt 90  Q
    ||||||||||||| ||||||||  | || ||||||||||||||||||||||||| ||||||||    
T  25694126 tagttaactgtctttggcatatgcgtcggcagttaactgccgctggctcctccaaaggcagtt 25694188  T

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Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 31602926 - 31602876
Alignment:
Q  21 ccagcgttagttaactgtctctggcatataagccgacagttaactgccgct 71  Q
    |||||| |||||||||| |||||||||||  ||||||||||||||||||||    
T  31602926 ccagcggtagttaactgcctctggcatatgcgccgacagttaactgccgct 31602876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 123 - 216
Target Start/End: Original strand, 35248736 - 35248829
Alignment:
Q  123 attttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccataaaagtacatataga 216  Q
    ||||| || |||| ||| |||||||||||||||||||| | ||  ||||||| ||||| ||||||  |||| |||| |||||| ||||||||||    
T  35248736 attttgcgtgttttggtcgaaaaatcaaaataaatcgagacttggtcagaatgctacataacttttgagacacctctataaaaatacatataga 35248829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 405 - 448
Target Start/End: Complemental strand, 25709218 - 25709175
Alignment:
Q  405 tcgatttattttgatttttcaaccgaactatgcaaaattgcaat 448  Q
    |||||||||||||||||||||||| || ||||||||||| ||||    
T  25709218 tcgatttattttgatttttcaaccaaaatatgcaaaattacaat 25709175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 377 - 423
Target Start/End: Original strand, 25609553 - 25609599
Alignment:
Q  377 taaagtttcgtagcatttcgactaagtctcgatttattttgattttt 423  Q
    ||||||||||||||||| | | |||| ||||||||||||||||||||    
T  25609553 taaagtttcgtagcattccaaataagcctcgatttattttgattttt 25609599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 142 - 215
Target Start/End: Complemental strand, 6038111 - 6038038
Alignment:
Q  142 aaaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccataaaagtacatatag 215  Q
    ||||||||||||||||||| | ||| ||  ||| |||| |||||||||||||  ||| |||||| |||||||||    
T  6038111 aaaaatcaaaataaatcgagacttaatcgaaatgctacgaaactttacagacaactctataaaaatacatatag 6038038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 143 - 252
Target Start/End: Original strand, 22929302 - 22929411
Alignment:
Q  143 aaaatcaaaataaatcgaaagttattcagaattctacaaaactttacagacgcctccataaaagtacatatagatgatgtgaatagtttcttaacattcc 242  Q
    |||||||||||||||| | | ||| || |||| |||| |||||||||||||  |||  ||| | |||||||||| |||||| | |||||| || ||||      
T  22929302 aaaatcaaaataaatctagacttagtctgaatgctacgaaactttacagacatctctgtaacaatacatatagaggatgtgcaaagtttcgtagcatttt 22929401  T
Q  243 gaataagtct 252  Q
    ||||||||||    
T  22929402 gaataagtct 22929411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 190
Target Start/End: Complemental strand, 47611094 - 47611034
Alignment:
Q  123 attttacgcgtttcggtagaaaaatcaaaataaatcgaaagttattcagaattctacaaaactttaca 190  Q
    ||||||||||||||||| |||||||||||||       || |||||||||||||||| ||||||||||    
T  47611094 attttacgcgtttcggtcgaaaaatcaaaat-------aacttattcagaattctacgaaactttaca 47611034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 430
Target Start/End: Original strand, 35248846 - 35248890
Alignment:
Q  386 gtagcatttcgactaagtctcgatttattttgatttttcaaccga 430  Q
    |||||||| ||| |||| ||||||||||||||||||||| |||||    
T  35248846 gtagcattccgaataaggctcgatttattttgatttttcgaccga 35248890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 162
Target Start/End: Original strand, 10784 - 10823
Alignment:
Q  123 attttacgcgtttcggtagaaaaatcaaaataaatcgaaa 162  Q
    ||||| ||||||||||| ||||||||||||||||||||||    
T  10784 attttgcgcgtttcggtcgaaaaatcaaaataaatcgaaa 10823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 162
Target Start/End: Original strand, 18353 - 18392
Alignment:
Q  123 attttacgcgtttcggtagaaaaatcaaaataaatcgaaa 162  Q
    ||||| ||||||||||| ||||||||||||||||||||||    
T  18353 attttgcgcgtttcggtcgaaaaatcaaaataaatcgaaa 18392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 32; Significance: 0.00000001; HSPs: 4)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 162
Target Start/End: Complemental strand, 50191 - 50152
Alignment:
Q  123 attttacgcgtttcggtagaaaaatcaaaataaatcgaaa 162  Q
    ||||| ||||||||||| ||||||||||||||||||||||    
T  50191 attttgcgcgtttcggtcgaaaaatcaaaataaatcgaaa 50152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 162
Target Start/End: Complemental strand, 95722 - 95683
Alignment:
Q  123 attttacgcgtttcggtagaaaaatcaaaataaatcgaaa 162  Q
    ||||| ||||||||||| ||||||||||||||||||||||    
T  95722 attttgcgcgtttcggtcgaaaaatcaaaataaatcgaaa 95683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 162
Target Start/End: Complemental strand, 39180 - 39147
Alignment:
Q  129 cgcgtttcggtagaaaaatcaaaataaatcgaaa 162  Q
    ||||||||||| ||||||||||||||||||||||    
T  39180 cgcgtttcggtcgaaaaatcaaaataaatcgaaa 39147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 162
Target Start/End: Complemental strand, 49118 - 49085
Alignment:
Q  129 cgcgtttcggtagaaaaatcaaaataaatcgaaa 162  Q
    ||||||||||| ||||||||||||||||||||||    
T  49118 cgcgtttcggtcgaaaaatcaaaataaatcgaaa 49085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 357 - 422
Target Start/End: Original strand, 47160 - 47225
Alignment:
Q  357 tatttatatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttattttgatttt 422  Q
    ||||| ||||||||| |||  ||||||  |||||||| | ||||||||| ||||||||||||||||    
T  47160 tatttttatagaggtgtctccaaagttctgtagcattcccactaagtctagatttattttgatttt 47225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 423
Target Start/End: Original strand, 47448 - 47508
Alignment:
Q  362 atatagaggtatctataaagtttcgtagcatttcgactaagtctcgatttattttgattttt 423  Q
    ||||||||| |||| ||||||||||||||||| ||| |||  ||| ||||||||||||||||    
T  47448 atatagagg-atctgtaaagtttcgtagcattccgaataatcctccatttattttgattttt 47508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055 (Bit Score: 30; Significance: 0.0000002; HSPs: 7)
Name: scaffold0055
Description:

Target: scaffold0055; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 162
Target Start/End: Original strand, 19892 - 19925
Alignment:
Q  129 cgcgtttcggtagaaaaatcaaaataaatcgaaa 162  Q
    ||||||||||| ||||||||||||||||||||||    
T  19892 cgcgtttcggtcgaaaaatcaaaataaatcgaaa 19925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 162
Target Start/End: Complemental strand, 34323 - 34290
Alignment:
Q  129 cgcgtttcggtagaaaaatcaaaataaatcgaaa 162  Q
    ||||||||||| ||||||||||||||||||||||    
T  34323 cgcgtttcggtcgaaaaatcaaaataaatcgaaa 34290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 162
Target Start/End: Complemental strand, 35447 - 35414
Alignment:
Q  129 cgcgtttcggtagaaaaatcaaaataaatcgaaa 162  Q
    ||||||||||| ||||||||||||||||||||||    
T  35447 cgcgtttcggtcgaaaaatcaaaataaatcgaaa 35414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 162
Target Start/End: Complemental strand, 43127 - 43094
Alignment:
Q  129 cgcgtttcggtagaaaaatcaaaataaatcgaaa 162  Q
    ||||||||||| ||||||||||||||||||||||    
T  43127 cgcgtttcggtcgaaaaatcaaaataaatcgaaa 43094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 162
Target Start/End: Complemental strand, 53495 - 53462
Alignment:
Q  129 cgcgtttcggtagaaaaatcaaaataaatcgaaa 162  Q
    ||||||||||| ||||||||||||||||||||||    
T  53495 cgcgtttcggtcgaaaaatcaaaataaatcgaaa 53462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 162
Target Start/End: Complemental strand, 55841 - 55808
Alignment:
Q  129 cgcgtttcggtagaaaaatcaaaataaatcgaaa 162  Q
    ||||||||||| ||||||||||||||||||||||    
T  55841 cgcgtttcggtcgaaaaatcaaaataaatcgaaa 55808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 162
Target Start/End: Complemental strand, 74513 - 74480
Alignment:
Q  129 cgcgtttcggtagaaaaatcaaaataaatcgaaa 162  Q
    ||||||||||| ||||||||||||||||||||||    
T  74513 cgcgtttcggtcgaaaaatcaaaataaatcgaaa 74480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052 (Bit Score: 30; Significance: 0.0000002; HSPs: 5)
Name: scaffold0052
Description:

Target: scaffold0052; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 162
Target Start/End: Original strand, 3774 - 3807
Alignment:
Q  129 cgcgtttcggtagaaaaatcaaaataaatcgaaa 162  Q
    ||||||||||| ||||||||||||||||||||||    
T  3774 cgcgtttcggtcgaaaaatcaaaataaatcgaaa 3807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 162
Target Start/End: Original strand, 18299 - 18332
Alignment:
Q  129 cgcgtttcggtagaaaaatcaaaataaatcgaaa 162  Q
    ||||||||||| ||||||||||||||||||||||    
T  18299 cgcgtttcggtcgaaaaatcaaaataaatcgaaa 18332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 162
Target Start/End: Complemental strand, 30238 - 30205
Alignment:
Q  129 cgcgtttcggtagaaaaatcaaaataaatcgaaa 162  Q
    ||||||||||| ||||||||||||||||||||||    
T  30238 cgcgtttcggtcgaaaaatcaaaataaatcgaaa 30205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 162
Target Start/End: Original strand, 41790 - 41823
Alignment:
Q  129 cgcgtttcggtagaaaaatcaaaataaatcgaaa 162  Q
    ||||||||||| ||||||||||||||||||||||    
T  41790 cgcgtttcggtcgaaaaatcaaaataaatcgaaa 41823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 162
Target Start/End: Complemental strand, 53447 - 53414
Alignment:
Q  129 cgcgtttcggtagaaaaatcaaaataaatcgaaa 162  Q
    ||||||||||| ||||||||||||||||||||||    
T  53447 cgcgtttcggtcgaaaaatcaaaataaatcgaaa 53414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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