View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15453_high_14 (Length: 282)

Name: NF15453_high_14
Description: NF15453
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15453_high_14
NF15453_high_14
[»] chr4 (6 HSPs)
chr4 (18-282)||(40289783-40290055)
chr4 (41-157)||(54305517-54305633)
chr4 (41-156)||(45612620-45612735)
chr4 (41-123)||(55680632-55680714)
chr4 (54-114)||(35529471-35529532)
chr4 (67-163)||(658632-658728)
[»] chr7 (10 HSPs)
chr7 (41-157)||(27616186-27616302)
chr7 (41-123)||(46532749-46532831)
chr7 (41-157)||(44572602-44572714)
chr7 (41-114)||(11812686-11812759)
chr7 (41-114)||(11815688-11815761)
chr7 (41-103)||(9730092-9730154)
chr7 (41-114)||(11809455-11809528)
chr7 (78-157)||(45216137-45216214)
chr7 (41-123)||(22290757-22290839)
chr7 (120-157)||(10678212-10678249)
[»] chr5 (3 HSPs)
chr5 (41-157)||(40837667-40837783)
chr5 (42-157)||(32676820-32676929)
chr5 (41-101)||(41815797-41815856)
[»] chr2 (9 HSPs)
chr2 (41-159)||(9929490-9929608)
chr2 (41-159)||(32201008-32201126)
chr2 (41-144)||(27003909-27004012)
chr2 (41-101)||(41848936-41848996)
chr2 (41-133)||(44650143-44650235)
chr2 (54-101)||(4748257-4748304)
chr2 (41-156)||(38783795-38783910)
chr2 (70-157)||(26575930-26576015)
chr2 (41-104)||(13037222-13037285)
[»] chr8 (9 HSPs)
chr8 (41-156)||(44502153-44502268)
chr8 (41-157)||(18603242-18603358)
chr8 (41-124)||(28420935-28421018)
chr8 (41-100)||(37855078-37855137)
chr8 (43-109)||(15132154-15132220)
chr8 (41-101)||(8689998-8690057)
chr8 (43-117)||(44508404-44508478)
chr8 (41-118)||(3159740-3159817)
chr8 (41-145)||(27401696-27401800)
[»] chr6 (11 HSPs)
chr6 (41-155)||(12843766-12843880)
chr6 (41-157)||(19294244-19294362)
chr6 (41-156)||(34011336-34011451)
chr6 (41-117)||(34013438-34013514)
chr6 (41-115)||(14494624-14494698)
chr6 (41-116)||(17539919-17539994)
chr6 (42-152)||(1255848-1255961)
chr6 (41-91)||(19542064-19542114)
chr6 (44-101)||(56925-56982)
chr6 (41-82)||(12790602-12790643)
chr6 (41-93)||(34708853-34708905)
[»] chr3 (7 HSPs)
chr3 (41-157)||(43922128-43922244)
chr3 (41-115)||(11410586-11410660)
chr3 (40-121)||(17716028-17716109)
chr3 (40-121)||(19017257-19017338)
chr3 (41-114)||(21409045-21409118)
chr3 (41-134)||(26565195-26565288)
chr3 (77-117)||(2227461-2227501)
[»] chr1 (3 HSPs)
chr1 (41-156)||(23431728-23431844)
chr1 (46-101)||(10171639-10171694)
chr1 (44-93)||(32740775-32740824)
[»] scaffold0325 (1 HSPs)
scaffold0325 (41-95)||(12801-12855)


Alignment Details
Target: chr4 (Bit Score: 198; Significance: 1e-108; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 18 - 282
Target Start/End: Original strand, 40289783 - 40290055
Alignment:
Q  18 agaacctgtggaggtatttggcctaaataaattaacatatatatagcagtgtcggtgttctatattttttacattagcgatgtcaacatgtctgtgtcag 117  Q
    |||||||| |||| |||||||||||||||||||||||||||| |||| ||||||||||| |||||||| |||||||||||  ||||||||||||||||||    
T  40289783 agaacctgaggagatatttggcctaaataaattaacatatatgtagcggtgtcggtgttttatatttt-tacattagcgacatcaacatgtctgtgtcag 40289881  T
Q  118 tatcgtaccaggtgtccgtgtcggagtccatacttcatagatcatgattaagagtgtagattatgtttatgcaagaagttagcgtactttgttggg---- 213  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        
T  40289882 tatcgtaccaggtgtccgtgtcggagtccatactttatagatcatgattaagagtgtagattatgtttatgcaagaagttagcgtactttgttgggtcaa 40289981  T
Q  214 -----tatgaacatttaaaaaatgtgtaaaaggtcaataataatcacttttagtaaaaaatgaattttataata 282  Q
         | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40289982 tctaatgtgaacatttaaaaaatgtgtaaaaggtcaataataatcacttttagtaaaaaatgaattttataata 40290055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 41 - 157
Target Start/End: Complemental strand, 54305633 - 54305517
Alignment:
Q  41 taaataaattaacatatatatagcagtgtcggtgttctatattttttacattagcgatgtcaacatgtctgtgtcagtatcgtaccaggtgtccgtgtcg 140  Q
    ||||||||||||||||||| |||| |||||||||| ||||| ||||||||||||||||||| || |||| |||||||| | ||  ||||||||||||| |    
T  54305633 taaataaattaacatatatgtagcggtgtcggtgtcctataatttttacattagcgatgtcgacgtgtccgtgtcagtgttgtgtcaggtgtccgtgttg 54305534  T
Q  141 gagtccatacttcatag 157  Q
    |||||||| ||||||||    
T  54305533 gagtccatgcttcatag 54305517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 41 - 156
Target Start/End: Original strand, 45612620 - 45612735
Alignment:
Q  41 taaataaattaacatatatatagcagtgtcggtgttctatattttttacattagcgatgtcaacatgtctgtgtcagtatcgtaccaggtgtccgtg-tc 139  Q
    ||||| ||||||||||||| ||   |||||||||| |||||||||||||||||||| |||| || ||||  | ||||| ||||  |||||||||||| ||    
T  45612620 taaatgaattaacatatatgtaattgtgtcggtgt-ctatattttttacattagcggtgtcgacgtgtccatatcagtgtcgtgtcaggtgtccgtgttc 45612718  T
Q  140 ggagtccatacttcata 156  Q
    ||||| |||||||||||    
T  45612719 ggagtacatacttcata 45612735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 41 - 123
Target Start/End: Complemental strand, 55680714 - 55680632
Alignment:
Q  41 taaataaattaacatatatatagcagtgtcggtgttctatattttttacattagcgatgtcaacatgtctgtgtcagtatcgt 123  Q
    ||||||||||||||||||  || | |||||||||| |||||||||||||||||||| |||| || |||| || ||||| ||||    
T  55680714 taaataaattaacatataagtaacggtgtcggtgtcctatattttttacattagcggtgtcgacgtgtccgtatcagtgtcgt 55680632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 54 - 114
Target Start/End: Complemental strand, 35529532 - 35529471
Alignment:
Q  54 atatatatagcagtgtcggtgttctatatttttt-acattagcgatgtcaacatgtctgtgt 114  Q
    |||||| |||| |||||||||| ||||||||||| ||||||||| |||| ||||||||||||    
T  35529532 atatatgtagcggtgtcggtgtcctatatttttttacattagcggtgtcgacatgtctgtgt 35529471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 163
Target Start/End: Original strand, 658632 - 658728
Alignment:
Q  67 tgtcggtgttctatattttttacattagcgatgtcaacatgtctgtgtcagtatcgtaccaggtgtccgtgtcggagtccatacttcatagatcatg 163  Q
    ||||||||| ||| |||||||||||||||  |||  || | || |||||||| ||||  | ||||||| ||||||||||| | ||||||||| ||||    
T  658632 tgtcggtgtcctagattttttacattagcagtgttgacgtatccgtgtcagtgtcgtgtcgggtgtccatgtcggagtccgtgcttcatagagcatg 658728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 1e-28; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 41 - 157
Target Start/End: Complemental strand, 27616302 - 27616186
Alignment:
Q  41 taaataaattaacatatatatagcagtgtcggtgttctatattttttacattagcgatgtcaacatgtctgtgtcagtatcgtaccaggtgtccgtgtcg 140  Q
    |||||||||||||||| || |||| |||||||||| || |||||||||||||| || |||| ||||||| |||||||||||||  ||||||| |||||||    
T  27616302 taaataaattaacatacatgtagcggtgtcggtgtcctgtattttttacattaacggtgtcgacatgtccgtgtcagtatcgtgtcaggtgtacgtgtcg 27616203  T
Q  141 gagtccatacttcatag 157  Q
    |||||||| ||||||||    
T  27616202 gagtccatgcttcatag 27616186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 41 - 123
Target Start/End: Complemental strand, 46532831 - 46532749
Alignment:
Q  41 taaataaattaacatatatatagcagtgtcggtgttctatattttttacattagcgatgtcaacatgtctgtgtcagtatcgt 123  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||| | ||||  |||| |||||||| ||||    
T  46532831 taaataaattaacatatatgtagcagtgtcagtgttctatattttttaaattagcggtatcaaagtgtccgtgtcagtgtcgt 46532749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 41 - 157
Target Start/End: Original strand, 44572602 - 44572714
Alignment:
Q  41 taaataaattaacatatatatagcagtgtcggtgttctatattttttacattagcgatgtcaacatgtctgtgtcagtatcgtaccaggtgtccgtgtcg 140  Q
    ||||||||||||||||||| |||| |||||||| | ||||||||||||||    || |||| || | || |||||||| ||||  |||| ||||||||||    
T  44572602 taaataaattaacatatatgtagcggtgtcggtttcctatattttttaca----cggtgtcgacgtatccgtgtcagtgtcgtgtcaggagtccgtgtcg 44572697  T
Q  141 gagtccatacttcatag 157  Q
    |||||||| ||||||||    
T  44572698 gagtccatgcttcatag 44572714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 41 - 114
Target Start/End: Original strand, 11812686 - 11812759
Alignment:
Q  41 taaataaattaacatatatatagcagtgtcggtgttctatattttttacattagcgatgtcaacatgtctgtgt 114  Q
    |||||||||||| |||||  |||| |||||||||| |||| ||||||||||||||| ||||||| |||||||||    
T  11812686 taaataaattaatatataggtagctgtgtcggtgtcctatgttttttacattagcggtgtcaacgtgtctgtgt 11812759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 41 - 114
Target Start/End: Original strand, 11815688 - 11815761
Alignment:
Q  41 taaataaattaacatatatatagcagtgtcggtgttctatattttttacattagcgatgtcaacatgtctgtgt 114  Q
    |||||||||||| | ||| ||||||||||| |||| |||||||||||||||||||| ||||||  |||||||||    
T  11815688 taaataaattaataaatagatagcagtgtcagtgtcctatattttttacattagcggtgtcaaggtgtctgtgt 11815761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 41 - 103
Target Start/End: Original strand, 9730092 - 9730154
Alignment:
Q  41 taaataaattaacatatatatagcagtgtcggtgttctatattttttacattagcgatgtcaa 103  Q
    |||||||||||| |||||  |||| ||||| ||||||||||||||||||||||| ||||||||    
T  9730092 taaataaattaatatataggtagcggtgtcagtgttctatattttttacattagtgatgtcaa 9730154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 114
Target Start/End: Original strand, 11809455 - 11809528
Alignment:
Q  41 taaataaattaacatatatatagcagtgtcggtgttctatattttttacattagcgatgtcaacatgtctgtgt 114  Q
    |||||||||||| |||||  |||||||||||||||  |||  |||||||||||| | |||||||||||||||||    
T  11809455 taaataaattaatatataggtagcagtgtcggtgtcttatgatttttacattagtggtgtcaacatgtctgtgt 11809528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 78 - 157
Target Start/End: Original strand, 45216137 - 45216214
Alignment:
Q  78 tatattttttacattagcgatgtcaacatgtctgtgtcagtatcgtaccaggtgtccgtgtcggagtccatacttcatag 157  Q
    ||||||||||||||||||| |||| || |||| |||||||| ||||  |||||||||||||  |||||||| ||||||||    
T  45216137 tatattttttacattagcggtgtcgacgtgtccgtgtcagtgtcgtgtcaggtgtccgtgt--gagtccatgcttcatag 45216214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 123
Target Start/End: Complemental strand, 22290839 - 22290757
Alignment:
Q  41 taaataaattaacatatatatagcagtgtcggtgttctatattttttacattagcgatgtcaacatgtctgtgtcagtatcgt 123  Q
    |||| ||||||||||| || |||  || ||||||| |||||||||||| ||||| | ||||||||||| ||| ||||| ||||    
T  22290839 taaacaaattaacataaatgtagtggtatcggtgtcctatattttttaaattagtggtgtcaacatgtttgtttcagtgtcgt 22290757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 157
Target Start/End: Complemental strand, 10678249 - 10678212
Alignment:
Q  120 tcgtaccaggtgtccgtgtcggagtccatacttcatag 157  Q
    ||||| ||||||||||||||||||||||| ||||||||    
T  10678249 tcgtatcaggtgtccgtgtcggagtccatgcttcatag 10678212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 3e-26; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 41 - 157
Target Start/End: Complemental strand, 40837783 - 40837667
Alignment:
Q  41 taaataaattaacatatatatagcagtgtcggtgttctatattttttacattagcgatgtcaacatgtctgtgtcagtatcgtaccaggtgtccgtgtcg 140  Q
    ||||||||||||||||||| |||| ||||| ||||  ||||||||||||| ||||| | ||||  |||| |||||| ||||||  |||||||||||||||    
T  40837783 taaataaattaacatatatctagcggtgtcagtgtcttatattttttacactagcggtatcaaagtgtccgtgtcattatcgtgtcaggtgtccgtgtcg 40837684  T
Q  141 gagtccatacttcatag 157  Q
    |||||||||||||||||    
T  40837683 gagtccatacttcatag 40837667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 42 - 157
Target Start/End: Original strand, 32676820 - 32676929
Alignment:
Q  42 aaataaattaacatatatatagcagtgtcggtgttctatattttttacattagcgatgtcaacatgtctgtgtcagtatcgtaccaggtgtccgtgtcgg 141  Q
    |||||||||||||||||| |||||| |||||||| |||| ||||||||||||||| |||| ||      |||||||| ||||  ||||||||||||||||    
T  32676820 aaataaattaacatatatgtagcagggtcggtgtcctattttttttacattagcggtgtcgac------gtgtcagtgtcgtgtcaggtgtccgtgtcgg 32676913  T
Q  142 agtccatacttcatag 157  Q
    ||||||| ||||||||    
T  32676914 agtccatgcttcatag 32676929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 101
Target Start/End: Original strand, 41815797 - 41815856
Alignment:
Q  41 taaataaattaacatatatatagcagtgtcggtgttctatattttttacattagcgatgtc 101  Q
    |||||||||||| |||||| |||| |||||||||| |||| ||||||||||||||| ||||    
T  41815797 taaataaattaatatatatgtagcggtgtcggtgtcctat-ttttttacattagcggtgtc 41815856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 5e-25; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 41 - 159
Target Start/End: Complemental strand, 9929608 - 9929490
Alignment:
Q  41 taaataaattaacatatatatagcagtgtcggtgttctatattttttacattagcgatgtcaacatgtctgtgtcagtatcgtaccaggtgtccgtgtcg 140  Q
    ||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||| |||| || |||| |||||||| ||||  || ||||  ||||||    
T  9929608 taaataaattaacatatatgtagcagtgttggtgtcctatattttttacattagcggtgtcgacgtgtccgtgtcagtgtcgtgtcaagtgtttgtgtcg 9929509  T
Q  141 gagtccatacttcatagat 159  Q
     ||||||| ||||||||||    
T  9929508 tagtccatgcttcatagat 9929490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 41 - 159
Target Start/End: Original strand, 32201008 - 32201126
Alignment:
Q  41 taaataaattaacatatatatagcagtgtcggtgttctatattttttacattagcgatgtcaacatgtctgtgtcagtatcgtaccaggtgtccgtgtcg 140  Q
    ||||||||||||||||||| ||   |||||||||| |||||||||||||||||||| |||| || |||| |||||||| ||||  ||||||| ||||| |    
T  32201008 taaataaattaacatatatttaatggtgtcggtgtcctatattttttacattagcggtgtcgacgtgtccgtgtcagtgtcgtgtcaggtgttcgtgttg 32201107  T
Q  141 gagtccatacttcatagat 159  Q
    |||||||| ||||||||||    
T  32201108 gagtccatgcttcatagat 32201126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 41 - 144
Target Start/End: Complemental strand, 27004012 - 27003909
Alignment:
Q  41 taaataaattaacatatatatagcagtgtcggtgttctatattttttacattagcgatgtcaacatgtctgtgtcagtatcgtaccaggtgtccgtgtcg 140  Q
    ||||||||||||||||||  |||| |||||||||| ||||||||||||||||| |  ||||||| | || |||| |||||||||  || | |||||||||    
T  27004012 taaataaattaacatatacgtagcggtgtcggtgtcctatattttttacattaacagtgtcaacttatccgtgttagtatcgtattagatatccgtgtcg 27003913  T
Q  141 gagt 144  Q
    ||||    
T  27003912 gagt 27003909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 41 - 101
Target Start/End: Complemental strand, 41848996 - 41848936
Alignment:
Q  41 taaataaattaacatatatatagcagtgtcggtgttctatattttttacattagcgatgtc 101  Q
    |||||||||||| ||||| ||||| |||||||||| |||||||||||||||||||| ||||    
T  41848996 taaataaattaatatatagatagcggtgtcggtgtcctatattttttacattagcggtgtc 41848936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 41 - 133
Target Start/End: Original strand, 44650143 - 44650235
Alignment:
Q  41 taaataaattaacatatatatagcagtgtcggtgttctatattttttacattagcgatgtcaacatgtctgtgtcagtatcgtaccaggtgtc 133  Q
    |||||||||||| |||||| ||||||||||  ||| |||||||||||| |||| || |||  |||||||||||||||| || || ||||||||    
T  44650143 taaataaattaatatatatgtagcagtgtcaatgtcctatattttttatattaacggtgttgacatgtctgtgtcagtgtcatatcaggtgtc 44650235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 54 - 101
Target Start/End: Original strand, 4748257 - 4748304
Alignment:
Q  54 atatatatagcagtgtcggtgttctatattttttacattagcgatgtc 101  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||    
T  4748257 atatatatagcagtgtcggtgtcctatattttttacattagcggtgtc 4748304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 156
Target Start/End: Original strand, 38783795 - 38783910
Alignment:
Q  41 taaataaattaacatatatatagcagtgtcggtgttctatattttttacattagcgatgtcaacatgtctgtgtcagtatcgtaccaggtgtccgtgtcg 140  Q
    |||||||||||| ||||| ||||||| |||||||| || |   |||||||||||| ||||| |  |||| |||||||||||||  ||||||||  |||||    
T  38783795 taaataaattaatatatagatagcagcgtcggtgtcctctgacttttacattagcaatgtcgatgtgtccgtgtcagtatcgtgtcaggtgtctatgtcg 38783894  T
Q  141 gagtccatacttcata 156  Q
    |||| ||| |||||||    
T  38783895 gagttcatgcttcata 38783910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 70 - 157
Target Start/End: Complemental strand, 26576015 - 26575930
Alignment:
Q  70 cggtgttctatattttttacattagcgatgtcaacatgtctgtgtcagtatcgtaccaggtgtccgtgtcggagtccatacttcatag 157  Q
    |||||| |||||||||||||||||||| |||| || |||| |||  ||| | ||  ||||||||||||||||||||||| ||||||||    
T  26576015 cggtgtcctatattttttacattagcggtgtcgacgtgtccgtg--agtgttgtgtcaggtgtccgtgtcggagtccatgcttcatag 26575930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 41 - 104
Target Start/End: Complemental strand, 13037285 - 13037222
Alignment:
Q  41 taaataaattaacatatatatagcagtgtcggtgttctatattttttacattagcgatgtcaac 104  Q
    ||||||||||||||||||| || |  ||||||| |  ||||||||||||||| |||||||||||    
T  13037285 taaataaattaacatatatgtaacgatgtcggtatcttatattttttacattggcgatgtcaac 13037222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 7e-21; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 41 - 156
Target Start/End: Complemental strand, 44502268 - 44502153
Alignment:
Q  41 taaataaattaacatatatatagcagtgtcggtgttctatattttttacattagcgatgtcaacatgtctgtgtcagtatcgtaccaggtgtccgtgtcg 140  Q
    |||||||||||| |||||| || |||||||||||| ||||||||||||||||||| ||||| ||  |||||| ||||| ||||   |||||||||| |||    
T  44502268 taaataaattaaaatatatgtaacagtgtcggtgtcctatattttttacattagcaatgtcgacgcgtctgtatcagtgtcgtgttaggtgtccgtatcg 44502169  T
Q  141 gagtccatacttcata 156  Q
    || ||||| |||||||    
T  44502168 gaatccatgcttcata 44502153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 41 - 157
Target Start/End: Original strand, 18603242 - 18603358
Alignment:
Q  41 taaataaattaacatatatatagcagtgtcggtgttctatattttttacattagcgatgtcaacatgtctgtgtcagtatcgtaccaggtgtccgtgtcg 140  Q
    ||||||||||||||| ||| |||  ||| |||||| |||||||||||||| || || |||| |  ||||||||||| ||  ||| |||||||| ||||||    
T  18603242 taaataaattaacatgtatgtagaggtgccggtgtcctatattttttacactaacggtgtcgaagtgtctgtgtcaatactgtatcaggtgtctgtgtcg 18603341  T
Q  141 gagtccatacttcatag 157  Q
    |||||||| ||||||||    
T  18603342 gagtccatgcttcatag 18603358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 124
Target Start/End: Complemental strand, 28421018 - 28420935
Alignment:
Q  41 taaataaattaacatatatatagcagtgtcggtgttctatattttttacattagcgatgtcaacatgtctgtgtcagtatcgta 124  Q
    ||||||||||||||||||| ||   |||||||||| ||||||||| |||||||||| ||||||| ||||  ||||||| |||||    
T  28421018 taaataaattaacatatatgtaatggtgtcggtgtcctatattttctacattagcggtgtcaacgtgtccatgtcagtgtcgta 28420935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 100
Target Start/End: Complemental strand, 37855137 - 37855078
Alignment:
Q  41 taaataaattaacatatatatagcagtgtcggtgttctatattttttacattagcgatgt 100  Q
    ||||||||| ||||||||| |||| |||||||||| ||||||||||||||||| ||||||    
T  37855137 taaataaatgaacatatatgtagcggtgtcggtgtcctatattttttacattatcgatgt 37855078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 43 - 109
Target Start/End: Original strand, 15132154 - 15132220
Alignment:
Q  43 aataaattaacatatatatagcagtgtcggtgttctatattttttacattagcgatgtcaacatgtc 109  Q
    ||||||||||||||||| |||| |||| ||||| |||||| ||||||||||||| ||||||| ||||    
T  15132154 aataaattaacatatatgtagcggtgttggtgtcctatatattttacattagcggtgtcaacgtgtc 15132220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 41 - 101
Target Start/End: Complemental strand, 8690057 - 8689998
Alignment:
Q  41 taaataaattaacatatatatagcagtgtcggtgttctatattttttacattagcgatgtc 101  Q
    |||||||||||| |||||| ||||| ||||||||||||||  |||||||||||||||||||    
T  8690057 taaataaattaatatatatgtagcaatgtcggtgttctat-gtttttacattagcgatgtc 8689998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 117
Target Start/End: Complemental strand, 44508478 - 44508404
Alignment:
Q  43 aataaattaacatatatatagcagtgtcggtgttctatattttttacattagcgatgtcaacatgtctgtgtcag 117  Q
    ||||||||||||| ||| |||| ||||| |||| |||||||||||| |||| || |||| |||| ||||||||||    
T  44508478 aataaattaacatttatgtagcggtgtctgtgtcctatattttttagattaacggtgtcgacatatctgtgtcag 44508404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 118
Target Start/End: Complemental strand, 3159817 - 3159740
Alignment:
Q  41 taaataaattaacatatatatagcagtgtcggtgttctatattttttacattagcgatgtcaacatgtctgtgtcagt 118  Q
    |||||||||||  ||| |  ||||||||||||||| |||| ||||||||||||||| ||| ||| |||| ||||||||    
T  3159817 taaataaattagtatacaggtagcagtgtcggtgtcctatgttttttacattagcggtgttaacgtgtcagtgtcagt 3159740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 145
Target Start/End: Complemental strand, 27401800 - 27401696
Alignment:
Q  41 taaataaattaacatatatatagcagtgtcggtgttctatattttttacattagcgatgtcaacatgtctgtgtcagtatcgtaccaggtgtccgtgtcg 140  Q
    |||||||||||| ||||| ||||| || | || || |||| ||||||||||||||| |||   | |||| |||||||| || || ||||||||||||||     
T  27401800 taaataaattaatatatagatagcggtattggcgtcctatgttttttacattagcggtgttggcgtgtccgtgtcagtgtcctatcaggtgtccgtgtca 27401701  T
Q  141 gagtc 145  Q
    |||||    
T  27401700 gagtc 27401696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 3e-20; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 41 - 155
Target Start/End: Complemental strand, 12843880 - 12843766
Alignment:
Q  41 taaataaattaacatatatatagcagtgtcggtgttctatattttttacattagcgatgtcaacatgtctgtgtcagtatcgtaccaggtgtccgtgtcg 140  Q
    ||||||||||||||||||| |||||||||  |||| |||||||| ||| ||||||  |||| || ||| ||||||||| ||||  || ||||||||||||    
T  12843880 taaataaattaacatatatgtagcagtgttagtgtcctatatttgttatattagcagtgtcgacgtgtttgtgtcagtgtcgtgtcaagtgtccgtgtcg 12843781  T
Q  141 gagtccatacttcat 155  Q
    |||||||| ||||||    
T  12843780 gagtccatgcttcat 12843766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 41 - 157
Target Start/End: Complemental strand, 19294362 - 19294244
Alignment:
Q  41 taaataaattaacatatatatagcagtgtcggtgttctatattttttacattagcgatgtcaacatgtctgtgtcagtatcgtac--caggtgtccgtgt 138  Q
    ||||||||||||||||||| |||| || ||||||| |||||||||||||||||||| |||| |  |||  |||||||| |||| |  ||||||||| |||    
T  19294362 taaataaattaacatatatgtagcggtatcggtgtcctatattttttacattagcggtgtcgatgtgttcgtgtcagtgtcgtgcgtcaggtgtccatgt 19294263  T
Q  139 cggagtccatacttcatag 157  Q
    | |||||||| ||||||||    
T  19294262 cagagtccatgcttcatag 19294244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 41 - 156
Target Start/End: Original strand, 34011336 - 34011451
Alignment:
Q  41 taaataaattaacatatatatagcagtgtcggtgttctatattttttacattagcgatgtcaacatgtctgtgtcagtatcgtaccaggtgtccgtgtcg 140  Q
    ||||||||||||||||||  || | |||||||||| ||||||||||||||||||||  ||| || |||| |||||||| | ||  || |||||||||||     
T  34011336 taaataaattaacatataagtaacggtgtcggtgtcctatattttttacattagcggcgtcgacgtgtccgtgtcagtgttgtgtcacgtgtccgtgtca 34011435  T
Q  141 gagtccatacttcata 156  Q
     ||||||| |||||||    
T  34011436 aagtccatgcttcata 34011451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 41 - 117
Target Start/End: Complemental strand, 34013514 - 34013438
Alignment:
Q  41 taaataaattaacatatatatagcagtgtcggtgttctatattttttacattagcgatgtcaacatgtctgtgtcag 117  Q
    ||||||||||||||||||  || | |||||||||| |||||||||||||||||||| |||| || |||| |||||||    
T  34013514 taaataaattaacatataagtaacggtgtcggtgtcctatattttttacattagcggtgtcgacgtgtccgtgtcag 34013438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 41 - 115
Target Start/End: Original strand, 14494624 - 14494698
Alignment:
Q  41 taaataaattaacatatatatagcagtgtcggtgttctatattttttacattagcgatgtcaacatgtctgtgtc 115  Q
    ||||||||||||||||||| |||| |||||||||| || ||| ||||||||||||| |||| || |||| |||||    
T  14494624 taaataaattaacatatatgtagcggtgtcggtgtcctgtatattttacattagcggtgtcgacgtgtccgtgtc 14494698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 116
Target Start/End: Complemental strand, 17539994 - 17539919
Alignment:
Q  41 taaataaattaacatatatatagcagtgtcggtgttctatattttttacattagcgatgtcaacatgtctgtgtca 116  Q
    ||||||||||||||||||| ||   ||||||||||  |||||||||||||||| || |||| ||||||| ||||||    
T  17539994 taaataaattaacatatatgtaatggtgtcggtgtcttatattttttacattaacggtgtcgacatgtccgtgtca 17539919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 42 - 152
Target Start/End: Original strand, 1255848 - 1255961
Alignment:
Q  42 aaataaattaacatatatatagcag---tgtcggtgttctatattttttacattagcgatgtcaacatgtctgtgtcagtatcgtaccaggtgtccgtgt 138  Q
    |||||||||||||||||| ||| ||   ||||||||| | |||||||||||| || |  |||| |  | ||||||||||||||||| |||||||| ||||    
T  1255848 aaataaattaacatatatgtagtagcggtgtcggtgtcccatattttttacactaacagtgtcgaagtatctgtgtcagtatcgtatcaggtgtctgtgt 1255947  T
Q  139 cggagtccatactt 152  Q
       |||||||||||    
T  1255948 taaagtccatactt 1255961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 19542114 - 19542064
Alignment:
Q  41 taaataaattaacatatatatagcagtgtcggtgttctatattttttacat 91  Q
    ||||||||||||||||||| ||||||| ||| ||| |||| ||||||||||    
T  19542114 taaataaattaacatatatgtagcagtatcgatgtcctatgttttttacat 19542064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 56982 - 56925
Alignment:
Q  44 ataaattaacatatatatagcagtgtcggtgttctatattttttacattagcgatgtc 101  Q
    |||||||||||||||| |||| ||||  |||| |||||||||||| ||||||| ||||    
T  56982 ataaattaacatatatgtagcggtgttcgtgtcctatattttttatattagcggtgtc 56925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 82
Target Start/End: Original strand, 12790602 - 12790643
Alignment:
Q  41 taaataaattaacatatatatagcagtgtcggtgttctatat 82  Q
    ||||||||||||||||||| |||| |||||||||| ||||||    
T  12790602 taaataaattaacatatatgtagcggtgtcggtgtcctatat 12790643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 34708905 - 34708853
Alignment:
Q  41 taaataaattaacatatatatagcagtgtcggtgttctatattttttacatta 93  Q
    ||||||||||||||||||  |||  |||||||||| |||||||| ||||||||    
T  34708905 taaataaattaacatatacgtagatgtgtcggtgtcctatatttcttacatta 34708853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 4e-19; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 41 - 157
Target Start/End: Original strand, 43922128 - 43922244
Alignment:
Q  41 taaataaattaacatatatatagcagtgtcggtgttctatattttttacattagcgatgtcaacatgtctgtgtcagtatcgtaccaggtgtccgtgtcg 140  Q
    ||||||||||||||| ||| |||  |||||||||| |||||||||||||| ||||| |||| |  |||| |||||||| ||||  ||||| || ||||||    
T  43922128 taaataaattaacatgtatgtagaggtgtcggtgtcctatattttttacactagcggtgtcgaagtgtccgtgtcagtgtcgtgtcaggtatctgtgtcg 43922227  T
Q  141 gagtccatacttcatag 157  Q
    |||||||| ||||||||    
T  43922228 gagtccatgcttcatag 43922244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 115
Target Start/End: Complemental strand, 11410660 - 11410586
Alignment:
Q  41 taaataaattaacatatatatagcagtgtcggtgttctatattttttacattagcgatgtcaacatgtctgtgtc 115  Q
    ||||||||||||||||||| |||| |||||||||| |||||| ||||||| ||||| ||||||  ||||||||||    
T  11410660 taaataaattaacatatatgtagcggtgtcggtgtcctatatattttacactagcggtgtcaaagtgtctgtgtc 11410586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 17716028 - 17716109
Alignment:
Q  40 ctaaataaattaacatatatatagcagtgtcggtgttctatattttttacattagcgatgtcaacatgtctgtgtcagtatc 121  Q
    ||||||||||||  |||||| |||| ||||| |||| ||||||| |||||||||||| |||| ||||||| ||||| |||||    
T  17716028 ctaaataaattagtatatatgtagcggtgtcagtgtcctatattatttacattagcggtgtcgacatgtccgtgtccgtatc 17716109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 19017257 - 19017338
Alignment:
Q  40 ctaaataaattaacatatatatagcagtgtcggtgttctatattttttacattagcgatgtcaacatgtctgtgtcagtatc 121  Q
    ||||||||||||  |||||| |||| ||||| |||| ||||||| |||||||||||| |||| ||||||| ||||| |||||    
T  19017257 ctaaataaattagtatatatgtagcggtgtcagtgtcctatattatttacattagcggtgtcgacatgtccgtgtccgtatc 19017338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 114
Target Start/End: Original strand, 21409045 - 21409118
Alignment:
Q  41 taaataaattaacatatatatagcagtgtcggtgttctatattttttacattagcgatgtcaacatgtctgtgt 114  Q
    ||||||||||||||||||| |||| ||||| || | ||||||||||||||||| || ||||||  |||||||||    
T  21409045 taaataaattaacatatatgtagcggtgtcagtatcctatattttttacattaacggtgtcaatgtgtctgtgt 21409118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 134
Target Start/End: Complemental strand, 26565288 - 26565195
Alignment:
Q  41 taaataaattaacatatatatagcagtgtcggtgttctatattttttacattagcgatgtcaacatgtctgtgtcagtatcgtaccaggtgtcc 134  Q
    ||||||||||||||||||| || | ||||| |||| || ||||||||||||||||| |||| |  |||| |||||||| ||||  |||||||||    
T  26565288 taaataaattaacatatatgtaacggtgtcagtgtcctgtattttttacattagcggtgtcgaagtgtccgtgtcagtgtcgtgtcaggtgtcc 26565195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 117
Target Start/End: Original strand, 2227461 - 2227501
Alignment:
Q  77 ctatattttttacattagcgatgtcaacatgtctgtgtcag 117  Q
    |||||||||||||||||||| |||| ||||||| |||||||    
T  2227461 ctatattttttacattagcggtgtcgacatgtccgtgtcag 2227501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 1e-16; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 41 - 156
Target Start/End: Complemental strand, 23431844 - 23431728
Alignment:
Q  41 taaataaattaacatatatatagcagtgtcggtgttctatatttttt-acattagcgatgtcaacatgtctgtgtcagtatcgtaccaggtgtccgtgtc 139  Q
    ||||||||||||||||||| ||||| ||||||| | ||||||||||| ||| || |  |||  |  ||| ||||||||| ||||| ||||||||||||||    
T  23431844 taaataaattaacatatatgtagcactgtcggtatcctatatttttttacactaccagtgttgaagtgtttgtgtcagtgtcgtatcaggtgtccgtgtc 23431745  T
Q  140 ggagtccatacttcata 156  Q
    ||||||||| |||||||    
T  23431744 ggagtccatgcttcata 23431728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 10171639 - 10171694
Alignment:
Q  46 aaattaacatatatatagcagtgtcggtgttctatattttttacattagcgatgtc 101  Q
    |||||||||||||| |||| |||||||||| |||||||||||||| ||||| ||||    
T  10171639 aaattaacatatatgtagcggtgtcggtgtcctatattttttacactagcggtgtc 10171694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 32740824 - 32740775
Alignment:
Q  44 ataaattaacatatatatagcagtgtcggtgttctatattttttacatta 93  Q
    |||||||||||||||| |||  ||||| |||| |||||||||||||||||    
T  32740824 ataaattaacatatatgtagtggtgtcagtgtcctatattttttacatta 32740775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0325 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 95
Target Start/End: Complemental strand, 12855 - 12801
Alignment:
Q  41 taaataaattaacatatatatagcagtgtcggtgttctatattttttacattagc 95  Q
    |||||||||||| |||||| |||| |||||||||| || ||||||||||||||||    
T  12855 taaataaattaatatatatgtagcggtgtcggtgtcctgtattttttacattagc 12801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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