View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15453_low_12 (Length: 390)

Name: NF15453_low_12
Description: NF15453
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15453_low_12
NF15453_low_12
[»] chr2 (12 HSPs)
chr2 (141-375)||(35906769-35907003)
chr2 (141-229)||(33136549-33136639)
chr2 (147-228)||(45547865-45547946)
chr2 (141-229)||(13832718-13832808)
chr2 (141-229)||(18178227-18178317)
chr2 (141-229)||(25289110-25289200)
chr2 (141-229)||(26789740-26789830)
chr2 (182-224)||(35171475-35171517)
chr2 (147-228)||(6288611-6288692)
chr2 (147-228)||(29941839-29941920)
chr2 (185-229)||(2289233-2289277)
chr2 (147-219)||(20156636-20156708)
[»] chr4 (8 HSPs)
chr4 (184-375)||(28846224-28846411)
chr4 (141-229)||(29649179-29649269)
chr4 (141-229)||(27769019-27769109)
chr4 (141-229)||(32323024-32323114)
chr4 (141-199)||(50019178-50019236)
chr4 (141-229)||(54342102-54342192)
chr4 (147-229)||(5801660-5801744)
chr4 (16-52)||(54610471-54610507)
[»] chr5 (11 HSPs)
chr5 (144-229)||(26629564-26629649)
chr5 (155-235)||(10572236-10572316)
chr5 (80-126)||(17519567-17519613)
chr5 (94-125)||(6827956-6827987)
chr5 (87-118)||(10553794-10553825)
chr5 (141-229)||(13999264-13999354)
chr5 (147-228)||(10553686-10553767)
chr5 (147-196)||(17519499-17519548)
chr5 (147-228)||(40411367-40411448)
chr5 (90-118)||(13949801-13949829)
chr5 (147-229)||(39853307-39853391)
[»] chr8 (23 HSPs)
chr8 (147-232)||(38805979-38806063)
chr8 (147-288)||(9209801-9209941)
chr8 (147-278)||(4302166-4302297)
chr8 (141-229)||(4030493-4030583)
chr8 (141-229)||(14781297-14781387)
chr8 (141-229)||(18305126-18305216)
chr8 (141-229)||(19717030-19717120)
chr8 (147-257)||(35143008-35143117)
chr8 (94-128)||(39466638-39466672)
chr8 (141-229)||(44724946-44725036)
chr8 (147-228)||(2113738-2113819)
chr8 (147-228)||(4656026-4656107)
chr8 (147-228)||(7148984-7149065)
chr8 (89-118)||(8502639-8502668)
chr8 (147-228)||(9458457-9458538)
chr8 (147-228)||(10795430-10795511)
chr8 (92-125)||(17791620-17791653)
chr8 (147-228)||(40264330-40264411)
chr8 (175-215)||(10128226-10128266)
chr8 (175-219)||(17791456-17791500)
chr8 (89-125)||(30381821-30381857)
chr8 (185-229)||(41385963-41386007)
chr8 (85-125)||(42366948-42366988)
[»] chr7 (15 HSPs)
chr7 (138-199)||(12893156-12893217)
chr7 (141-229)||(9881449-9881539)
chr7 (147-228)||(27417703-27417784)
chr7 (147-228)||(35089152-35089233)
chr7 (147-229)||(33891402-33891486)
chr7 (140-229)||(3023880-3023971)
chr7 (85-128)||(18839350-18839393)
chr7 (141-229)||(510601-510691)
chr7 (141-229)||(23102246-23102336)
chr7 (141-229)||(28343265-28343355)
chr7 (141-229)||(39785051-39785141)
chr7 (147-228)||(12252441-12252522)
chr7 (141-229)||(29613954-29614045)
chr7 (147-228)||(43056743-43056824)
chr7 (147-199)||(33383628-33383680)
[»] chr3 (26 HSPs)
chr3 (94-229)||(17947173-17947310)
chr3 (141-229)||(11432502-11432592)
chr3 (141-229)||(51736917-51737007)
chr3 (144-228)||(2124757-2124841)
chr3 (91-199)||(39039063-39039171)
chr3 (141-229)||(18750588-18750678)
chr3 (141-229)||(31645413-31645503)
chr3 (141-229)||(34483254-34483344)
chr3 (141-229)||(39841605-39841695)
chr3 (147-229)||(45214139-45214221)
chr3 (141-229)||(45254604-45254694)
chr3 (141-199)||(52617136-52617194)
chr3 (141-229)||(54629805-54629895)
chr3 (147-228)||(23697921-23698002)
chr3 (147-228)||(23716376-23716457)
chr3 (147-228)||(23734832-23734913)
chr3 (89-122)||(23754601-23754634)
chr3 (147-228)||(24149892-24149973)
chr3 (147-228)||(30589795-30589876)
chr3 (147-264)||(34290222-34290339)
chr3 (147-228)||(36054065-36054146)
chr3 (147-228)||(46223361-46223442)
chr3 (89-125)||(27593998-27594034)
chr3 (181-229)||(33416941-33416989)
chr3 (94-126)||(43152080-43152112)
chr3 (147-229)||(50902516-50902600)
[»] chr1 (10 HSPs)
chr1 (269-336)||(52178211-52178276)
chr1 (94-125)||(1923373-1923404)
chr1 (147-229)||(1923424-1923506)
chr1 (141-229)||(6313531-6313621)
chr1 (141-229)||(25613047-25613137)
chr1 (147-229)||(28038390-28038472)
chr1 (141-229)||(29395587-29395677)
chr1 (141-229)||(51702549-51702639)
chr1 (90-127)||(9174936-9174973)
chr1 (147-228)||(14389373-14389453)
[»] scaffold0054 (1 HSPs)
scaffold0054 (141-229)||(36450-36540)
[»] chr6 (5 HSPs)
chr6 (141-229)||(34774340-34774430)
chr6 (141-229)||(30384221-30384311)
chr6 (138-199)||(4199634-4199695)
chr6 (147-228)||(6475798-6475879)
chr6 (147-228)||(29864807-29864888)
[»] scaffold0095 (1 HSPs)
scaffold0095 (94-128)||(21829-21863)
[»] scaffold0237 (1 HSPs)
scaffold0237 (147-228)||(20502-20583)
[»] scaffold0153 (1 HSPs)
scaffold0153 (147-228)||(33880-33961)
[»] scaffold0016 (1 HSPs)
scaffold0016 (147-228)||(80848-80929)


Alignment Details
Target: chr2 (Bit Score: 183; Significance: 7e-99; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 141 - 375
Target Start/End: Complemental strand, 35907003 - 35906769
Alignment:
Q  141 tttaaaattttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatttgaaaagactttttacattcaagatttatatcaaagga 240  Q
    ||||| |||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||| ||||| || |||||||||||| |||||||    
T  35907003 tttaagattttaaatgactttgcaggattatattgactctatgagattttaaaagacttatttgaaaagatttttttcactcaagatttataccaaagga 35906904  T
Q  241 ttttataggatttaaaacacagatcttgaagatttcaatggattttattggatttataattcagacttttaggatttcaaatgactcattgacatcacgt 340  Q
    |||||| ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35906903 ttttatgggatttataacaaagatcttgaagatttcaatggattttattggatttataattcagacttttaggatttcaaatgactcattgacatcacgt 35906804  T
Q  341 aaatcctatacatagcatcaagacgtgcaacaact 375  Q
    ||| |||||||||||||| ||||||||||||||||    
T  35906803 aaaccctatacatagcataaagacgtgcaacaact 35906769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 229
Target Start/End: Complemental strand, 33136639 - 33136549
Alignment:
Q  141 tttaaaattttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatt-tg-aaaagactttttacattcaagattt 229  Q
    ||||| ||||||||||||| ||  ||||| |||||| || ||||||||||||||||||| || || |||||||||| |||| |||||||||    
T  33136639 tttaagattttaaaagactgtgtgagattgtattgattctatgagattttaaaagactttttatgtaaaagactttatacactcaagattt 33136549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 147 - 228
Target Start/End: Complemental strand, 45547946 - 45547865
Alignment:
Q  147 attttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatttgaaaagactttttacattcaagatt 228  Q
    ||||||||||||||||   |||| |||||| |   |||||||||||||||||| |||  |||||||||||||| ||||||||    
T  45547946 attttaaaagactttgttggattgtattgattttgtgagattttaaaagactttttttgaaagactttttacaatcaagatt 45547865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 229
Target Start/End: Original strand, 13832718 - 13832808
Alignment:
Q  141 tttaaaattttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatt-tg-aaaagactttttacattcaagattt 229  Q
    ||||| ||||||||||||| ||  ||||| |||||| ||  |||||||||||||||||| || || |||||||||| |||| |||||||||    
T  13832718 tttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagactttttatgtaaaagactttatacactcaagattt 13832808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 229
Target Start/End: Complemental strand, 18178317 - 18178227
Alignment:
Q  141 tttaaaattttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatt-tg-aaaagactttttacattcaagattt 229  Q
    ||||| ||||||||||||| ||  ||||| |||||| ||  |||||||||||||||||| || || |||||||||| |||| |||||||||    
T  18178317 tttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagactttttatgtaaaagactttatacactcaagattt 18178227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 229
Target Start/End: Complemental strand, 25289200 - 25289110
Alignment:
Q  141 tttaaaattttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatt-tg-aaaagactttttacattcaagattt 229  Q
    ||||| ||||||||||||| ||  ||||| |||||| ||  |||||||||||||||||| || || |||||||||| |||| |||||||||    
T  25289200 tttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagactttttatgtaaaagactttatacactcaagattt 25289110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 229
Target Start/End: Complemental strand, 26789830 - 26789740
Alignment:
Q  141 tttaaaattttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatt-tg-aaaagactttttacattcaagattt 229  Q
    ||||| ||||||||||||| ||  ||||| |||||| ||  |||||||||||||||||| || || |||||||||| |||| |||||||||    
T  26789830 tttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagactttttatgtaaaagactttatacactcaagattt 26789740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 224
Target Start/End: Original strand, 35171475 - 35171517
Alignment:
Q  182 tgagattttaaaagacttatttgaaaagactttttacattcaa 224  Q
    |||||||||||||||||| ||| ||||||||||||||| ||||    
T  35171475 tgagattttaaaagactttttttaaaagactttttacaatcaa 35171517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 228
Target Start/End: Original strand, 6288611 - 6288692
Alignment:
Q  147 attttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatttgaaaagactttttacattcaagatt 228  Q
    ||||||||||||||||   |||| |||||| |   || |||||||||| |||| ||| ||||||||||||||| ||||||||    
T  6288611 attttaaaagactttgttggattgtattgattttgtgggattttaaaaaactttttttaaaagactttttacaatcaagatt 6288692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 228
Target Start/End: Complemental strand, 29941920 - 29941839
Alignment:
Q  147 attttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatttgaaaagactttttacattcaagatt 228  Q
    ||||||||||||||||   |||| |||||| |   || ||||||||||||||| |||  |||||||||||||| ||||||||    
T  29941920 attttaaaagactttgttggattgtattgattttgtgggattttaaaagactttttttgaaagactttttacaatcaagatt 29941839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 2289277 - 2289233
Alignment:
Q  185 gattttaaaagacttatttgaaaagactttttacattcaagattt 229  Q
    |||||||||||||||  |||||| ||||||||||| |||||||||    
T  2289277 gattttaaaagactttattgaaaggactttttacaatcaagattt 2289233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 219
Target Start/End: Original strand, 20156636 - 20156708
Alignment:
Q  147 attttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatttgaaaagactttttaca 219  Q
    ||||||||||| ||||  ||||||||||||||   |  ||||||||||||||| ||| ||| |||||||||||    
T  20156636 attttaaaagattttgtgagattatattgactttgttggattttaaaagacttttttcaaatgactttttaca 20156708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 139; Significance: 1e-72; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 184 - 375
Target Start/End: Original strand, 28846224 - 28846411
Alignment:
Q  184 agattttaaaagacttatttgaaaagactttttacattcaagatttatatcaaaggattttataggatttaaaacacagatcttgaagatttcaatggat 283  Q
    ||||||||||||||||||||||||    |||||||| |||| ||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  28846224 agattttaaaagacttatttgaaa----tttttacactcaatatttataccaaaggattttatgggatttataacacagatcttgaagatttcaatggat 28846319  T
Q  284 tttattggatttataattcagacttttaggatttcaaatgactcattgacatcacgtaaatcctatacatagcatcaagacgtgcaacaact 375  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||    
T  28846320 tttattggatttataattcagacttttagaatttcaaatgactcattaccatcacgtaaaccctatacatagcatcaagacgtgcaacaact 28846411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 229
Target Start/End: Original strand, 29649179 - 29649269
Alignment:
Q  141 tttaaaattttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatt-tg-aaaagactttttacattcaagattt 229  Q
    ||||| ||||||||||||| ||  ||||| |||||| || ||||||||||||||||||| || || |||||||||| |||| |||||||||    
T  29649179 tttaagattttaaaagactgtgtgagattgtattgattctatgagattttaaaagactttttatgtaaaagactttatacactcaagattt 29649269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 229
Target Start/End: Complemental strand, 27769109 - 27769019
Alignment:
Q  141 tttaaaattttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatt-tg-aaaagactttttacattcaagattt 229  Q
    ||||| ||||||||||||| ||  ||||| |||||| ||  |||||||||||||||||| || || |||||||||| |||| |||||||||    
T  27769109 tttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagactttttatgtaaaagactttatacactcaagattt 27769019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 229
Target Start/End: Complemental strand, 32323114 - 32323024
Alignment:
Q  141 tttaaaattttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatt-tg-aaaagactttttacattcaagattt 229  Q
    ||||| ||||||||||| | ||  ||||| |||||| ||  |||||||||||||||||| || || |||||||||| ||||||||||||||    
T  32323114 tttaagattttaaaagattgtgtgagattgtattgattctgtgagattttaaaagactttttatgtaaaagactttatacattcaagattt 32323024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 199
Target Start/End: Complemental strand, 50019236 - 50019178
Alignment:
Q  141 tttaaaattttaaaagactttgcaagattatattgactcgatgagattttaaaagactt 199  Q
    ||||||||||||||||||| ||  ||||| |||||| ||  ||||||||||||||||||    
T  50019236 tttaaaattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagactt 50019178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 229
Target Start/End: Complemental strand, 54342192 - 54342102
Alignment:
Q  141 tttaaaattttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatt-tg-aaaagactttttacattcaagattt 229  Q
    ||||| ||||||||||||| ||  ||||| |||||| ||  |||||||||||||||||| || || |||||||||| |||| |||||||||    
T  54342192 tttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagactttttatgcaaaagactttatacactcaagattt 54342102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 229
Target Start/End: Complemental strand, 5801744 - 5801660
Alignment:
Q  147 attttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatt-tg-aaaagactttttacattcaagattt 229  Q
    ||||||||||||| ||  ||||| |||||| ||  |||||||||||||||||| || || |||||||||| |||| |||||||||    
T  5801744 attttaaaagactgtgtgagattgtattgattctgtgagattttaaaagactttttatgtaaaagactttatacactcaagattt 5801660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 52
Target Start/End: Complemental strand, 54610507 - 54610471
Alignment:
Q  16 ataactatcacatttgcaaaaataatttgtcccaaaa 52  Q
    |||| ||||||||||||||||||||||| ||||||||    
T  54610507 ataaatatcacatttgcaaaaataatttatcccaaaa 54610471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 4e-17; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 144 - 229
Target Start/End: Original strand, 26629564 - 26629649
Alignment:
Q  144 aaaattttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatttgaaaagactttttacattcaagattt 229  Q
    |||||||||||||| |||| | |||| ||  ||||| ||||||||||||||||||| ||| ||||||||||||||| |||||||||    
T  26629564 aaaattttaaaagattttgtaggattgtaaagactctatgagattttaaaagacttgttttaaaagactttttacaatcaagattt 26629649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 155 - 235
Target Start/End: Complemental strand, 10572316 - 10572236
Alignment:
Q  155 agactttgcaagattatattgactcgatgagattttaaaagacttatttgaaaagactttttacattcaagatttatatca 235  Q
    |||||||| |||||| |||||| ||  |||||| ||||||||||| ||| ||||||||||||||| |||||||||||||||    
T  10572316 agactttgtaagattctattgattctgtgagatattaaaagactttttttaaaagactttttacactcaagatttatatca 10572236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 126
Target Start/End: Complemental strand, 17519613 - 17519567
Alignment:
Q  80 tttttacttagggatgtattggattgagattttaaaagattatttta 126  Q
    |||| |||||||||||||||||||| ||||||||||||| |||||||    
T  17519613 ttttgacttagggatgtattggattaagattttaaaagactatttta 17519567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 94 - 125
Target Start/End: Original strand, 6827956 - 6827987
Alignment:
Q  94 tgtattggattgagattttaaaagattatttt 125  Q
    ||||||||||||||||||||||||||||||||    
T  6827956 tgtattggattgagattttaaaagattatttt 6827987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 87 - 118
Target Start/End: Complemental strand, 10553825 - 10553794
Alignment:
Q  87 ttagggatgtattggattgagattttaaaaga 118  Q
    ||||||||||||||||||||||||||||||||    
T  10553825 ttagggatgtattggattgagattttaaaaga 10553794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 229
Target Start/End: Original strand, 13999264 - 13999354
Alignment:
Q  141 tttaaaattttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatt-tg-aaaagactttttacattcaagattt 229  Q
    ||||| ||||||||||||| ||  ||||| |||||| ||  |||||||||||||||||| || || |||||||||| |||| |||||||||    
T  13999264 tttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagactttttatgtaaaagactttatacactcaagattt 13999354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 228
Target Start/End: Complemental strand, 10553767 - 10553686
Alignment:
Q  147 attttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatttgaaaagactttttacattcaagatt 228  Q
    ||||||||||||||||   |||| |||||| |   || ||||||||||||||| |||  |||||||||||||| ||||||||    
T  10553767 attttaaaagactttgttggattgtattgattttgtgggattttaaaagactttttttgaaagactttttacaatcaagatt 10553686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 196
Target Start/End: Complemental strand, 17519548 - 17519499
Alignment:
Q  147 attttaaaagactttgcaagattatattgactcgatgagattttaaaaga 196  Q
    |||||||||||||||| |||||| |||||| ||  |||||||||||||||    
T  17519548 attttaaaagactttgtaagattttattgattctgtgagattttaaaaga 17519499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 228
Target Start/End: Complemental strand, 40411448 - 40411367
Alignment:
Q  147 attttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatttgaaaagactttttacattcaagatt 228  Q
    ||||||||||||||||   |||| |||||| |   || ||||||||||||||| |||  |||||||||||||| ||||||||    
T  40411448 attttaaaagactttgttggattgtattgattttgtgggattttaaaagactttttttgaaagactttttacaatcaagatt 40411367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 118
Target Start/End: Original strand, 13949801 - 13949829
Alignment:
Q  90 gggatgtattggattgagattttaaaaga 118  Q
    |||||||||||||||||||||||||||||    
T  13949801 gggatgtattggattgagattttaaaaga 13949829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 229
Target Start/End: Complemental strand, 39853391 - 39853307
Alignment:
Q  147 attttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatt-tg-aaaagactttttacattcaagattt 229  Q
    ||||||||||||| ||  ||||| |||||| ||  |||||||||||||||||| || || |||||||||| |||| |||||||||    
T  39853391 attttaaaagactctgtgagattgtattgattctgtgagattttaaaagactttttatgtaaaagactttatacactcaagattt 39853307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 147 - 232
Target Start/End: Original strand, 38805979 - 38806063
Alignment:
Q  147 attttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatttgaaaagactttttacattcaagatttata 232  Q
    |||||||||||||||  | |||| |||||| || |||||||||||||||| || ||| ||||||||||||||| ||||||||||||    
T  38805979 attttaaaagactttttaggattgtattgattctatgagattttaaaaga-tttttttaaaagactttttacaatcaagatttata 38806063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 147 - 288
Target Start/End: Complemental strand, 9209941 - 9209801
Alignment:
Q  147 attttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatttgaaaagactttttacattcaagatttatatcaaaggattttat 246  Q
    ||||||||||| ||||  |||||||||||| |   |  ||||||||||||||| ||| ||| ||||||||||| ||| |||||  | || | ||||||||    
T  9209941 attttaaaagattttgtgagattatattgattttgttggattttaaaagacttttttcaaatgactttttacaatcaggattttgaacacatgattttat 9209842  T
Q  247 aggatttaaaacacagatcttgaagatttcaatggattttat 288  Q
     ||||||| || ||| || || |||||||||| |||||||||    
T  9209841 tggatttataatacaaat-tttaagatttcaacggattttat 9209801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 147 - 278
Target Start/End: Original strand, 4302166 - 4302297
Alignment:
Q  147 attttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatttgaaaagactttttacattcaagatttatatcaaaggattttat 246  Q
    ||||||||||| ||||  ||||||||||||||   |  ||||||||||||||| ||| ||| ||||||||||| | |||||||  | || | |||||||     
T  4302166 attttaaaagattttgtgagattatattgactttgttggattttaaaagacttttttcaaatgactttttacaattaagattttgaacacatgattttaa 4302265  T
Q  247 aggatttaaaacacagatcttgaagatttcaa 278  Q
     ||||||| || ||| || || ||||||||||    
T  4302266 tggatttataatacaaatttttaagatttcaa 4302297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 229
Target Start/End: Original strand, 4030493 - 4030583
Alignment:
Q  141 tttaaaattttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatt-tg-aaaagactttttacattcaagattt 229  Q
    ||||| ||||||||||||| ||  ||||| |||||| ||  |||||||||||||||||| || || |||||||||| |||| |||||||||    
T  4030493 tttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagactttttatgtaaaagactttatacactcaagattt 4030583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 229
Target Start/End: Original strand, 14781297 - 14781387
Alignment:
Q  141 tttaaaattttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatt-tg-aaaagactttttacattcaagattt 229  Q
    ||||| ||||||||||||| ||  ||||| |||||| ||  |||||||||||||||||| || || |||||||||| |||| |||||||||    
T  14781297 tttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagactttttatgtaaaagactttatacactcaagattt 14781387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 229
Target Start/End: Original strand, 18305126 - 18305216
Alignment:
Q  141 tttaaaattttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatt-tg-aaaagactttttacattcaagattt 229  Q
    ||||| ||||||||||||| ||  ||||| |||||| ||  |||||||||||||||||| || || |||||||||| |||| |||||||||    
T  18305126 tttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagactttttatgtaaaagactttatacactcaagattt 18305216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 229
Target Start/End: Original strand, 19717030 - 19717120
Alignment:
Q  141 tttaaaattttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatt-tg-aaaagactttttacattcaagattt 229  Q
    ||||| ||||||||||||| ||  ||||| |||||| ||  |||||||||||||||||| || || |||||||||| |||| |||||||||    
T  19717030 tttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagactttttatgtaaaagactttatacactcaagattt 19717120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 257
Target Start/End: Complemental strand, 35143117 - 35143008
Alignment:
Q  147 attttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatttgaaaagactttttacattcaagatttatatcaaaggattttat 246  Q
    ||||||||||||| || |||||| |||||| |   |||||||||||||||||| ||  |||| |   |||||| |||||||||||| |||| |||||||     
T  35143117 attttaaaagactctgtaagattgtattgattttgtgagattttaaaagactttttaaaaaaaaaaatttacactcaagatttataacaaa-gattttaa 35143019  T
Q  247 aggatttaaaa 257  Q
     ||||||||||    
T  35143018 tggatttaaaa 35143008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 128
Target Start/End: Original strand, 39466638 - 39466672
Alignment:
Q  94 tgtattggattgagattttaaaagattattttaat 128  Q
    ||||||||||| |||||||||||||||||||||||    
T  39466638 tgtattggattaagattttaaaagattattttaat 39466672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 229
Target Start/End: Original strand, 44724946 - 44725036
Alignment:
Q  141 tttaaaattttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatt-tg-aaaagactttttacattcaagattt 229  Q
    ||||| ||||||||||||| ||  ||||| |||||| ||  |||||||||||||||||| || || |||||||||| |||| |||||||||    
T  44724946 tttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagactttttatgtaaaagactttatacactcaagattt 44725036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 228
Target Start/End: Complemental strand, 2113819 - 2113738
Alignment:
Q  147 attttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatttgaaaagactttttacattcaagatt 228  Q
    ||||||||||||||||   |||| |||||| |   || ||||||||||||||| |||  |||||||||||||| ||||||||    
T  2113819 attttaaaagactttgttggattgtattgattttgtgggattttaaaagactttttttgaaagactttttacaatcaagatt 2113738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 228
Target Start/End: Complemental strand, 4656107 - 4656026
Alignment:
Q  147 attttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatttgaaaagactttttacattcaagatt 228  Q
    ||||||||||||||||   |||| |||||| |   || ||||||||||||||| |||  |||||||||||||| ||||||||    
T  4656107 attttaaaagactttgttggattgtattgattttgtgggattttaaaagactttttttgaaagactttttacaatcaagatt 4656026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 228
Target Start/End: Complemental strand, 7149065 - 7148984
Alignment:
Q  147 attttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatttgaaaagactttttacattcaagatt 228  Q
    ||||||||||||||||   |||| |||||| |   || ||||||||||||||| |||  |||||||||||||| ||||||||    
T  7149065 attttaaaagactttgttggattgtattgattttgtgggattttaaaagactttttttgaaagactttttacaatcaagatt 7148984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 118
Target Start/End: Original strand, 8502639 - 8502668
Alignment:
Q  89 agggatgtattggattgagattttaaaaga 118  Q
    ||||||||||||||||||||||||||||||    
T  8502639 agggatgtattggattgagattttaaaaga 8502668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 228
Target Start/End: Complemental strand, 9458538 - 9458457
Alignment:
Q  147 attttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatttgaaaagactttttacattcaagatt 228  Q
    ||||||||||||||||   |||| |||||| |   || ||||||||||||||| |||  |||||||||||||| ||||||||    
T  9458538 attttaaaagactttgttggattgtattgattttgtgggattttaaaagactttttttgaaagactttttacaatcaagatt 9458457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 228
Target Start/End: Original strand, 10795430 - 10795511
Alignment:
Q  147 attttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatttgaaaagactttttacattcaagatt 228  Q
    ||||||||||||||||   |||| |||||| |   || ||||||||||||||| |||  |||||||||||||| ||||||||    
T  10795430 attttaaaagactttgttggattgtattgattttgtgggattttaaaagactttttttgaaagactttttacaatcaagatt 10795511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 125
Target Start/End: Complemental strand, 17791653 - 17791620
Alignment:
Q  92 gatgtattggattgagattttaaaagattatttt 125  Q
    ||||||||||||||||||||||||||| ||||||    
T  17791653 gatgtattggattgagattttaaaagactatttt 17791620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 228
Target Start/End: Original strand, 40264330 - 40264411
Alignment:
Q  147 attttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatttgaaaagactttttacattcaagatt 228  Q
    ||||||||||||||||   |||| |||||| |   || ||||||||||||||| |||  |||||||||||||| ||||||||    
T  40264330 attttaaaagactttgttggattgtattgattttgtgggattttaaaagactttttttgaaagactttttacaatcaagatt 40264411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 215
Target Start/End: Complemental strand, 10128266 - 10128226
Alignment:
Q  175 gactcgatgagattttaaaagacttatttgaaaagactttt 215  Q
    ||||| ||||||||||||||||||| ||| |||||||||||    
T  10128266 gactctatgagattttaaaagacttttttcaaaagactttt 10128226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 219
Target Start/End: Complemental strand, 17791500 - 17791456
Alignment:
Q  175 gactcgatgagattttaaaagacttatttgaaaagactttttaca 219  Q
    ||||| ||||||||||||||||||| ||| ||| |||||||||||    
T  17791500 gactctatgagattttaaaagacttttttcaaatgactttttaca 17791456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 89 - 125
Target Start/End: Original strand, 30381821 - 30381857
Alignment:
Q  89 agggatgtattggattgagattttaaaagattatttt 125  Q
    |||| ||||||||||||||||||||||||| ||||||    
T  30381821 aggggtgtattggattgagattttaaaagactatttt 30381857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 41385963 - 41386007
Alignment:
Q  185 gattttaaaagacttatttgaaaagactttttacattcaagattt 229  Q
    ||||||||||||||| |||  |||||||||||||| |||||||||    
T  41385963 gattttaaaagactttttttgaaagactttttacaatcaagattt 41386007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 85 - 125
Target Start/End: Complemental strand, 42366988 - 42366948
Alignment:
Q  85 acttagggatgtattggattgagattttaaaagattatttt 125  Q
    |||||||| |||||||||||||||||||||| || ||||||    
T  42366988 acttaggggtgtattggattgagattttaaatgactatttt 42366948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 138 - 199
Target Start/End: Original strand, 12893156 - 12893217
Alignment:
Q  138 tcttttaaaattttaaaagactttgcaagattatattgactcgatgagattttaaaagactt 199  Q
    |||||||||||||||||||||||||  ||||| |||||| || |||||||||||||||||||    
T  12893156 tcttttaaaattttaaaagactttgtgagattgtattgattctatgagattttaaaagactt 12893217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 229
Target Start/End: Original strand, 9881449 - 9881539
Alignment:
Q  141 tttaaaattttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatt-tg-aaaagactttttacattcaagattt 229  Q
    ||||| ||||||||||||| ||  ||||| |||||| || ||||||||||||||||||| || || |||||||||| |||| |||||||||    
T  9881449 tttaagattttaaaagactgtgtgagattgtattgattctatgagattttaaaagactttttatgtaaaagactttatacactcaagattt 9881539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 147 - 228
Target Start/End: Original strand, 27417703 - 27417784
Alignment:
Q  147 attttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatttgaaaagactttttacattcaagatt 228  Q
    ||||||||||||||||  ||||| |||||| |   || ||||||||||||||| |||  |||||||||||||| ||||||||    
T  27417703 attttaaaagactttgttagattgtattgattttgtgggattttaaaagactttttttcaaagactttttacaatcaagatt 27417784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 147 - 228
Target Start/End: Original strand, 35089152 - 35089233
Alignment:
Q  147 attttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatttgaaaagactttttacattcaagatt 228  Q
    ||||||||||||||||   |||| |||||| |   |||||||||||||||||| |||  |||||||||||||| ||||||||    
T  35089152 attttaaaagactttgttggattgtattgattttgtgagattttaaaagactttttttgaaagactttttacaatcaagatt 35089233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 229
Target Start/End: Original strand, 33891402 - 33891486
Alignment:
Q  147 attttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatt-tg-aaaagactttttacattcaagattt 229  Q
    ||||||||||||| ||  ||||| |||||| ||  |||||||||||||||||| || || ||||||||||||||| |||||||||    
T  33891402 attttaaaagactatgtgagattgtattgattctgtgagattttaaaagactttttatgtaaaagactttttacactcaagattt 33891486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 140 - 229
Target Start/End: Complemental strand, 3023971 - 3023880
Alignment:
Q  140 ttttaaaattttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatt-tg-aaaagactttttacattcaagattt 229  Q
    |||||| ||||||||||||| ||  ||||| |||||| ||  |||||||||||||||||| || || |||||||||| |||| |||||||||    
T  3023971 ttttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagactttttatgtaaaagactttatacactcaagattt 3023880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 85 - 128
Target Start/End: Complemental strand, 18839393 - 18839350
Alignment:
Q  85 acttagggatgtattggattgagattttaaaagattattttaat 128  Q
    |||||||| |||||||||||  ||||||||||||||||||||||    
T  18839393 acttaggggtgtattggattaggattttaaaagattattttaat 18839350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 229
Target Start/End: Complemental strand, 510691 - 510601
Alignment:
Q  141 tttaaaattttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatt-tg-aaaagactttttacattcaagattt 229  Q
    ||||| ||||||||||||| ||  ||||| |||||| ||  |||||||||||||||||| || || |||||||||| |||| |||||||||    
T  510691 tttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagactttttatgtaaaagactttatacactcaagattt 510601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 229
Target Start/End: Complemental strand, 23102336 - 23102246
Alignment:
Q  141 tttaaaattttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatt-tg-aaaagactttttacattcaagattt 229  Q
    ||||| ||||||||||||| ||  ||||| |||||| ||  |||||||||||||||||| || || |||||||||| |||| |||||||||    
T  23102336 tttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagactttttatgtaaaagactttatacactcaagattt 23102246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 229
Target Start/End: Complemental strand, 28343355 - 28343265
Alignment:
Q  141 tttaaaattttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatt-tg-aaaagactttttacattcaagattt 229  Q
    ||||| ||||||||||||| ||  ||||| |||||| ||  |||||||||||||||||| || || |||||||||| |||| |||||||||    
T  28343355 tttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagactttttatgtaaaagactttatacactcaagattt 28343265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 229
Target Start/End: Complemental strand, 39785141 - 39785051
Alignment:
Q  141 tttaaaattttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatt-tg-aaaagactttttacattcaagattt 229  Q
    ||||| ||||||||||||| ||| ||||| |||||| ||  ||| |||||||||||||| || || |||||||||| |||| |||||||||    
T  39785141 tttaagattttaaaagactgtgcgagattgtattgattctgtgaaattttaaaagactttttatgtaaaagactttatacactcaagattt 39785051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 228
Target Start/End: Original strand, 12252441 - 12252522
Alignment:
Q  147 attttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatttgaaaagactttttacattcaagatt 228  Q
    ||||||||||||||||   |||| |||||| |   || ||||||||||||||| |||  |||||||||||||| ||||||||    
T  12252441 attttaaaagactttgttggattgtattgattttgtgggattttaaaagactttttttgaaagactttttacaatcaagatt 12252522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 229
Target Start/End: Original strand, 29613954 - 29614045
Alignment:
Q  141 tttaaaattttaaaagactttgcaagattatattgactcgatgagattttaaaagacttattt---gaaaagactttttacattcaagattt 229  Q
    ||||| ||||||||||||| ||  ||||| |||||| ||  |||||||||||||||||| |||    |||||||||| |||| |||||||||    
T  29613954 tttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagacttttttatgtaaaagactttatacactcaagattt 29614045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 228
Target Start/End: Original strand, 43056743 - 43056824
Alignment:
Q  147 attttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatttgaaaagactttttacattcaagatt 228  Q
    ||||||||||||||||   |||| |||||| |   || ||||||||||||||| |||  |||||||||||||| ||||||||    
T  43056743 attttaaaagactttgttggattgtattgattttgtgggattttaaaagactttttttgaaagactttttacaatcaagatt 43056824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 199
Target Start/End: Complemental strand, 33383680 - 33383628
Alignment:
Q  147 attttaaaagactttgcaagattatattgactcgatgagattttaaaagactt 199  Q
    ||||||||||||| || |||||| |||||| ||  ||||||||||||||||||    
T  33383680 attttaaaagactgtgtaagattgtattgattctgtgagattttaaaagactt 33383628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 94 - 229
Target Start/End: Complemental strand, 17947310 - 17947173
Alignment:
Q  94 tgtattggattgagattttaaaagattattttaatgnnnnnnnntcttttaaaattttaaaagactttgcaagattatattgactcgatgagattttaaa 193  Q
    |||||||||||  |||||||||||| |||||||||         |||||||||||||||||||||| ||  ||||| |||||| ||  ||||||||||||    
T  17947310 tgtattggattaggattttaaaagactattttaataaaaaaaaatcttttaaaattttaaaagactatgtgagattgtattgattctgtgagattttaaa 17947211  T
Q  194 agacttatt-tg-aaaagactttttacattcaagattt 229  Q
    |||||| || || |||||||||| |||| |||||||||    
T  17947210 agactttttatgtaaaagactttatacactcaagattt 17947173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 229
Target Start/End: Complemental strand, 11432592 - 11432502
Alignment:
Q  141 tttaaaattttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatt-tg-aaaagactttttacattcaagattt 229  Q
    ||||||||||||||||||| ||  ||||| |||||| ||  |||||||||||||||||| || || |||||||||| |||| |||||||||    
T  11432592 tttaaaattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagactttttatgtaaaagactttatacactcaagattt 11432502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 229
Target Start/End: Original strand, 51736917 - 51737007
Alignment:
Q  141 tttaaaattttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatt-tg-aaaagactttttacattcaagattt 229  Q
    ||||| ||||||||||||| ||| ||||| |||||| ||  |||||||||||||||||| || || |||||||||| |||| |||||||||    
T  51736917 tttaagattttaaaagactatgcgagattgtattgattctgtgagattttaaaagactttttatgtaaaagactttatacactcaagattt 51737007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 228
Target Start/End: Original strand, 2124757 - 2124841
Alignment:
Q  144 aaaattttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatttgaaaagactttttacattcaagatt 228  Q
    |||||||||||||||||||   |||| |||||| |   || ||||||||||||||| |||  |||||||||||||| ||||||||    
T  2124757 aaaattttaaaagactttgttggattgtattgattttgtgggattttaaaagactttttttgaaagactttttacaatcaagatt 2124841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 199
Target Start/End: Complemental strand, 39039171 - 39039063
Alignment:
Q  91 ggatgtattggattgagattttaaaagattattttaatgnnnnnnnntcttttaaaattttaaaagactttgcaagattatattgactcgatgagatttt 190  Q
    ||||||||||||||  ||||||||||||  ||||||||         |||||||| |||||||| |||||||  ||||| |||||| ||  |||||||||    
T  39039171 ggatgtattggattatgattttaaaagacaattttaataaaaaaaagtcttttaagattttaaatgactttgtgagattgtattgattctgtgagatttt 39039072  T
Q  191 aaaagactt 199  Q
    |||||||||    
T  39039071 aaaagactt 39039063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 229
Target Start/End: Complemental strand, 18750678 - 18750588
Alignment:
Q  141 tttaaaattttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatt-tg-aaaagactttttacattcaagattt 229  Q
    ||||| ||||||||||||| ||  ||||| |||||| ||  |||||||||||||||||| || || |||||||||| |||| |||||||||    
T  18750678 tttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagactttttatgtaaaagactttatacactcaagattt 18750588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 229
Target Start/End: Original strand, 31645413 - 31645503
Alignment:
Q  141 tttaaaattttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatt-tg-aaaagactttttacattcaagattt 229  Q
    ||||| ||||||||||||| ||  ||||| |||||| ||  |||||||||||||||||| || || |||||||||| |||| |||||||||    
T  31645413 tttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagactttttatgtaaaagactttatacactcaagattt 31645503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 229
Target Start/End: Original strand, 34483254 - 34483344
Alignment:
Q  141 tttaaaattttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatt-tg-aaaagactttttacattcaagattt 229  Q
    ||||| ||||||||||||| ||  ||||| |||||| ||  |||||||||||||||||| || || |||||||||| |||| |||||||||    
T  34483254 tttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagactttttatgtaaaagactttatacactcaagattt 34483344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 229
Target Start/End: Original strand, 39841605 - 39841695
Alignment:
Q  141 tttaaaattttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatt-tg-aaaagactttttacattcaagattt 229  Q
    ||||| ||||||||||||| ||| ||||| |||||| |   |||||||||||||||||| || || |||||||||| |||| |||||||||    
T  39841605 tttaagattttaaaagactgtgcgagattgtattgattatgtgagattttaaaagactttttatgtaaaagactttatacactcaagattt 39841695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 229
Target Start/End: Original strand, 45214139 - 45214221
Alignment:
Q  147 attttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatttgaaaagactttttacattcaagattt 229  Q
    ||||||||||||||||   |||| |||||| |   ||||||||||||||||||  || ||||| ||||||||| |||||||||    
T  45214139 attttaaaagactttgtgtgattgtattgattttgtgagattttaaaagactttatttaaaaggctttttacaatcaagattt 45214221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 229
Target Start/End: Original strand, 45254604 - 45254694
Alignment:
Q  141 tttaaaattttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatt-tg-aaaagactttttacattcaagattt 229  Q
    ||||| ||||||||||||| ||  ||||| |||||| ||  |||||||||||||||||| || || |||||||||| |||| |||||||||    
T  45254604 tttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagactttttatgtaaaagactttatacactcaagattt 45254694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 199
Target Start/End: Original strand, 52617136 - 52617194
Alignment:
Q  141 tttaaaattttaaaagactttgcaagattatattgactcgatgagattttaaaagactt 199  Q
    ||||| ||||||||||||||||  ||||| |||||| ||  ||||||||||||||||||    
T  52617136 tttaagattttaaaagactttgtgagattgtattgattctgtgagattttaaaagactt 52617194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 229
Target Start/End: Complemental strand, 54629895 - 54629805
Alignment:
Q  141 tttaaaattttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatt-tg-aaaagactttttacattcaagattt 229  Q
    ||||| || |||||||||| ||  ||||| |||||| ||  |||||||||||||||||| || || |||||||||| ||||||||||||||    
T  54629895 tttaagatgttaaaagactgtgtgagattgtattgattctgtgagattttaaaagactttttatgtaaaagactttatacattcaagattt 54629805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 228
Target Start/End: Complemental strand, 23698002 - 23697921
Alignment:
Q  147 attttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatttgaaaagactttttacattcaagatt 228  Q
    ||||||||||||||||   |||| |||||| |   || ||||| ||||||||| ||| ||||||||||||||| ||||||||    
T  23698002 attttaaaagactttgttggattgtattgattttgtgggatttcaaaagactttttttaaaagactttttacaatcaagatt 23697921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 228
Target Start/End: Complemental strand, 23716457 - 23716376
Alignment:
Q  147 attttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatttgaaaagactttttacattcaagatt 228  Q
    ||||||||||||||||   |||| |||||| |   || ||||| ||||||||| ||| ||||||||||||||| ||||||||    
T  23716457 attttaaaagactttgttggattgtattgattttgtgggatttcaaaagactttttttaaaagactttttacaatcaagatt 23716376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 228
Target Start/End: Complemental strand, 23734913 - 23734832
Alignment:
Q  147 attttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatttgaaaagactttttacattcaagatt 228  Q
    ||||||||||||||||   |||| |||||| |   || ||||| ||||||||| ||| ||||||||||||||| ||||||||    
T  23734913 attttaaaagactttgttggattgtattgattttgtgggatttcaaaagactttttttaaaagactttttacaatcaagatt 23734832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 122
Target Start/End: Complemental strand, 23754634 - 23754601
Alignment:
Q  89 agggatgtattggattgagattttaaaagattat 122  Q
    |||| |||||||||||||||||||||||||||||    
T  23754634 aggggtgtattggattgagattttaaaagattat 23754601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 228
Target Start/End: Original strand, 24149892 - 24149973
Alignment:
Q  147 attttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatttgaaaagactttttacattcaagatt 228  Q
    |||||||| |||||||   ||||||||||| |   || ||||||||||||||| |||  |||||||||||||| ||||||||    
T  24149892 attttaaatgactttgttggattatattgattttgtgggattttaaaagactttttttgaaagactttttacaatcaagatt 24149973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 228
Target Start/End: Complemental strand, 30589876 - 30589795
Alignment:
Q  147 attttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatttgaaaagactttttacattcaagatt 228  Q
    ||||||||||||||||   |||| |||||| |   || ||||||||||||||| |||  |||||||||||||| ||||||||    
T  30589876 attttaaaagactttgttggattgtattgattttgtgggattttaaaagactttttttgaaagactttttacaatcaagatt 30589795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 264
Target Start/End: Original strand, 34290222 - 34290339
Alignment:
Q  147 attttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatttgaaaagactttttacattcaagatttatatcaaaggattttat 246  Q
    ||||||||||||||||   |||| |||||| |  ||| ||||||||||||||| ||| ||| || |||||||| |||  |||| || || | |||||||     
T  34290222 attttaaaagactttgtgtgattgtattgattttatgggattttaaaagacttttttaaaatgattttttacaatcagaatttttaacacaagattttaa 34290321  T
Q  247 aggatttaaaacacagat 264  Q
     ||||||| |||||||||    
T  34290322 tggatttataacacagat 34290339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 228
Target Start/End: Original strand, 36054065 - 36054146
Alignment:
Q  147 attttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatttgaaaagactttttacattcaagatt 228  Q
    ||||||||||||||||   |||| |||||| |   || ||||||||||||||| |||  |||||||||||||| ||||||||    
T  36054065 attttaaaagactttgttggattgtattgattttgtgggattttaaaagactttttttcaaagactttttacaatcaagatt 36054146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 228
Target Start/End: Original strand, 46223361 - 46223442
Alignment:
Q  147 attttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatttgaaaagactttttacattcaagatt 228  Q
    ||||||||||||||||   |||| |||||| |   || ||||||||||||||| ||| |||||| |||||||| ||||||||    
T  46223361 attttaaaagactttgttggattgtattgattttgtgggattttaaaagactttttttaaaagattttttacaatcaagatt 46223442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 89 - 125
Target Start/End: Complemental strand, 27594034 - 27593998
Alignment:
Q  89 agggatgtattggattgagattttaaaagattatttt 125  Q
    |||| ||||||||||||||||||||||||| ||||||    
T  27594034 aggggtgtattggattgagattttaaaagactatttt 27593998  T

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Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 229
Target Start/End: Complemental strand, 33416989 - 33416941
Alignment:
Q  181 atgagattttaaaagacttatttgaaaagactttttacattcaagattt 229  Q
    |||||||||||||||| || ||| ||| ||||||||||| |||||||||    
T  33416989 atgagattttaaaagatttttttcaaatgactttttacaatcaagattt 33416941  T

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Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 126
Target Start/End: Complemental strand, 43152112 - 43152080
Alignment:
Q  94 tgtattggattgagattttaaaagattatttta 126  Q
    ||||||||||||||||||||||||| |||||||    
T  43152112 tgtattggattgagattttaaaagactatttta 43152080  T

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Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 229
Target Start/End: Original strand, 50902516 - 50902600
Alignment:
Q  147 attttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatt-tg-aaaagactttttacattcaagattt 229  Q
    ||||||||||||| ||  ||||| |||||| ||  |||||||||||||||||| || || |||||||||| |||| |||||||||    
T  50902516 attttaaaagactgtgtgagattgtattgattctgtgagattttaaaagactttttatgtaaaagactttatacactcaagattt 50902600  T

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Target: chr1 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 269 - 336
Target Start/End: Complemental strand, 52178276 - 52178211
Alignment:
Q  269 aagatttcaatggattttattggatttataattcagacttttaggatttcaaatgactcattgacatc 336  Q
    |||||||||||| |||||||||||||||||| ||| ||||||||||||  ||||||||||||| ||||    
T  52178276 aagatttcaatgaattttattggatttataactcaaacttttaggatt--aaatgactcattggcatc 52178211  T

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Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 94 - 125
Target Start/End: Original strand, 1923373 - 1923404
Alignment:
Q  94 tgtattggattgagattttaaaagattatttt 125  Q
    ||||||||||||||||||||||||||||||||    
T  1923373 tgtattggattgagattttaaaagattatttt 1923404  T

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Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 229
Target Start/End: Original strand, 1923424 - 1923506
Alignment:
Q  147 attttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatttgaaaagactttttacattcaagattt 229  Q
    ||||||||||| ||||  ||||||||||||||   |  ||||||||||||||| ||| ||| ||||||||||| ||| |||||    
T  1923424 attttaaaagattttgtgagattatattgactttgttggattttaaaagacttttttcaaatgactttttacaatcaggattt 1923506  T

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Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 229
Target Start/End: Complemental strand, 6313621 - 6313531
Alignment:
Q  141 tttaaaattttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatt-tg-aaaagactttttacattcaagattt 229  Q
    ||||| ||||||||||||| ||  ||||| |||||| ||  |||||||||||||||||| || || |||||||||| |||| |||||||||    
T  6313621 tttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagactttttatgtaaaagactttatacactcaagattt 6313531  T

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Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 229
Target Start/End: Complemental strand, 25613137 - 25613047
Alignment:
Q  141 tttaaaattttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatt-tg-aaaagactttttacattcaagattt 229  Q
    ||||| ||||||||||||| ||  ||||| |||||| ||  |||||||||||||||||| || || |||||||||| |||| |||||||||    
T  25613137 tttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagactttttatgtaaaagactttatacactcaagattt 25613047  T

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Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 229
Target Start/End: Original strand, 28038390 - 28038472
Alignment:
Q  147 attttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatttgaaaagactttttacattcaagattt 229  Q
    ||||||||||||||||  | |||||||||| |  ||  ||||||||||||||| ||| ||| ||||||||||| ||| |||||    
T  28038390 attttaaaagactttgtgaaattatattgattttataggattttaaaagactttttttaaatgactttttacaatcaggattt 28038472  T

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Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 229
Target Start/End: Original strand, 29395587 - 29395677
Alignment:
Q  141 tttaaaattttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatt-tg-aaaagactttttacattcaagattt 229  Q
    ||||| ||||||||||||| ||  ||||| |||||| ||  |||||||||||||||||| || || |||||||||| |||| |||||||||    
T  29395587 tttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagactttttatgcaaaagactttatacactcaagattt 29395677  T

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Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 229
Target Start/End: Complemental strand, 51702639 - 51702549
Alignment:
Q  141 tttaaaattttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatt-tg-aaaagactttttacattcaagattt 229  Q
    ||||| ||||||||||||| ||  ||||| |||||| ||  |||||||||||||||||| || || |||||||||| |||| |||||||||    
T  51702639 tttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagactttttatgtaaaagactttatacactcaagattt 51702549  T

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Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 127
Target Start/End: Complemental strand, 9174973 - 9174936
Alignment:
Q  90 gggatgtattggattgagattttaaaagattattttaa 127  Q
    |||||||||| |||||||||||||||||| ||||||||    
T  9174973 gggatgtatttgattgagattttaaaagactattttaa 9174936  T

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Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 228
Target Start/End: Complemental strand, 14389453 - 14389373
Alignment:
Q  147 attttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatttgaaaagactttttacattcaagatt 228  Q
    ||||||||||||||||   |||| |||||| |   || ||||||||||||||| ||| ||||||||||||||| ||||||||    
T  14389453 attttaaaagactttgttggattgtattgattttgtgggattttaaaagactttttt-aaaagactttttacaatcaagatt 14389373  T

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Target: scaffold0054 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 229
Target Start/End: Original strand, 36450 - 36540
Alignment:
Q  141 tttaaaattttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatt-tg-aaaagactttttacattcaagattt 229  Q
    ||||| ||||||||||||| ||  |||||||||||| ||  |||||||||||||||||| || || |||||||||| |||| |||||||||    
T  36450 tttaagattttaaaagactgtgtgagattatattgattctgtgagattttaaaagactttttatgtaaaagactttatacactcaagattt 36540  T

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Target: chr6 (Bit Score: 35; Significance: 0.0000000001; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 229
Target Start/End: Complemental strand, 34774430 - 34774340
Alignment:
Q  141 tttaaaattttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatt-tg-aaaagactttttacattcaagattt 229  Q
    ||||| ||||||||||||| || |||||| |||||| ||  |||||||||||||||||| || || |||||||||| |||| |||||||||    
T  34774430 tttaagattttaaaagactgtgtaagattgtattgattctgtgagattttaaaagactttttatgtaaaagactttatacactcaagattt 34774340  T

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Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 229
Target Start/End: Original strand, 30384221 - 30384311
Alignment:
Q  141 tttaaaattttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatt-tg-aaaagactttttacattcaagattt 229  Q
    ||||| ||||||||||||| ||  ||||| |||||| ||  |||||||||||||||||| || || |||||||||| |||| |||||||||    
T  30384221 tttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagactttttatgtaaaagactttatacactcaagattt 30384311  T

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Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 199
Target Start/End: Original strand, 4199634 - 4199695
Alignment:
Q  138 tcttttaaaattttaaaagactttgcaagattatattgactcgatgagattttaaaagactt 199  Q
    |||||||| ||||||||||||| ||  ||||| |||||| ||  ||||||||||||||||||    
T  4199634 tcttttaagattttaaaagactgtgtgagattgtattgattctgtgagattttaaaagactt 4199695  T

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Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 228
Target Start/End: Original strand, 6475798 - 6475879
Alignment:
Q  147 attttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatttgaaaagactttttacattcaagatt 228  Q
    ||||||||||||||||   |||| |||||| |   || ||||||||||||||| |||  |||||||||||||| ||||||||    
T  6475798 attttaaaagactttgttggattgtattgattttgtgggattttaaaagactttttttgaaagactttttacaatcaagatt 6475879  T

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Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 228
Target Start/End: Original strand, 29864807 - 29864888
Alignment:
Q  147 attttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatttgaaaagactttttacattcaagatt 228  Q
    ||||||||||||||||   |||| |||||| |   || ||||||||||||||| |||  |||||||||||||| ||||||||    
T  29864807 attttaaaagactttgttggattgtattgattttgtgggattttaaaagactttttttgaaagactttttacaatcaagatt 29864888  T

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Target: scaffold0095 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 128
Target Start/End: Complemental strand, 21863 - 21829
Alignment:
Q  94 tgtattggattgagattttaaaagattattttaat 128  Q
    ||||||||||| |||||||||||||||||||||||    
T  21863 tgtattggattaagattttaaaagattattttaat 21829  T

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Target: scaffold0237 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 228
Target Start/End: Original strand, 20502 - 20583
Alignment:
Q  147 attttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatttgaaaagactttttacattcaagatt 228  Q
    ||||||||||||||||   |||| |||||| |   || ||||||||||||||| |||  |||||||||||||| ||||||||    
T  20502 attttaaaagactttgttggattgtattgattttgtgggattttaaaagactttttttgaaagactttttacaatcaagatt 20583  T

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Target: scaffold0153 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 228
Target Start/End: Original strand, 33880 - 33961
Alignment:
Q  147 attttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatttgaaaagactttttacattcaagatt 228  Q
    ||||||||||||||||   |||| |||||| |   || ||||||||||||||| |||  |||||||||||||| ||||||||    
T  33880 attttaaaagactttgttggattgtattgattttgtgggattttaaaagactttttttgaaagactttttacaatcaagatt 33961  T

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Target: scaffold0016 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 228
Target Start/End: Original strand, 80848 - 80929
Alignment:
Q  147 attttaaaagactttgcaagattatattgactcgatgagattttaaaagacttatttgaaaagactttttacattcaagatt 228  Q
    ||||||||||||||||   |||| |||||| |   || ||||||||||||||| |||  |||||||||||||| ||||||||    
T  80848 attttaaaagactttgttggattgtattgattttgtgggattttaaaagactttttttgaaagactttttacaatcaagatt 80929  T

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