View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15453_low_16 (Length: 344)
Name: NF15453_low_16
Description: NF15453
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15453_low_16 |
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Alignment Details
Target: chr8 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 1 - 264
Target Start/End: Original strand, 11599280 - 11599547
Alignment:
| Q |
1 |
tgtggacagatgcatgcaatataaaaagcatcaaagttttctccgaaagtatgggatattagtaaattttaattaaagtccttccatatttggaaaagaa |
100 |
Q |
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| T |
11599280 |
tgtggacagatgcatgcaatataaaaagcatcaaagttttctccgaaagtatgggatattagtaaattttaattaaagtacttccatatttggaaaagaa |
11599379 |
T |
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| Q |
101 |
gaatccatctagttcgtgatcccatgtgggccaaatcaaggattttcattttaattatttcttcatttaggacactcgaaaacaacaaatagaagttaga |
200 |
Q |
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| T |
11599380 |
gaatctatctagttcgtgatcccatgtgggccaaatcaaggattttcattttaattatttcttcatttaggacactcgaaaacaacaaaaagatgttaga |
11599479 |
T |
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| Q |
201 |
aggcgtgcggaagctctag----attaatttattttaacaagttcgatgcaagaaaggaaaacactat |
264 |
Q |
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| T |
11599480 |
aggcgtgcggaagctctagattaattaattaattttaacaagttcgatgcaagaaaggaaaacactat |
11599547 |
T |
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