View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15453_low_18 (Length: 310)

Name: NF15453_low_18
Description: NF15453
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15453_low_18
NF15453_low_18
[»] chr5 (53 HSPs)
chr5 (9-310)||(31569754-31570054)
chr5 (165-239)||(18817588-18817662)
chr5 (160-239)||(18816950-18817029)
chr5 (160-238)||(11351405-11351483)
chr5 (165-239)||(19514940-19515014)
chr5 (162-239)||(21207226-21207303)
chr5 (160-239)||(12498565-12498644)
chr5 (160-239)||(26570727-26570806)
chr5 (160-239)||(26571141-26571220)
chr5 (160-239)||(43464169-43464247)
chr5 (160-214)||(25116063-25116117)
chr5 (160-214)||(25175153-25175207)
chr5 (165-239)||(34147487-34147561)
chr5 (165-214)||(18433318-18433367)
chr5 (159-238)||(10098919-10098997)
chr5 (160-239)||(12498905-12498984)
chr5 (165-224)||(18433018-18433077)
chr5 (161-239)||(2817148-2817226)
chr5 (165-239)||(11350811-11350884)
chr5 (160-214)||(25115755-25115809)
chr5 (160-214)||(25174847-25174901)
chr5 (165-239)||(37780719-37780793)
chr5 (160-214)||(41382891-41382944)
chr5 (168-216)||(16726084-16726132)
chr5 (165-224)||(26020453-26020512)
chr5 (165-239)||(3888242-3888316)
chr5 (161-239)||(3888639-3888717)
chr5 (165-239)||(22729011-22729084)
chr5 (165-239)||(22729417-22729490)
chr5 (160-214)||(33324840-33324894)
chr5 (161-239)||(43463755-43463832)
chr5 (163-210)||(12441196-12441244)
chr5 (160-212)||(16466746-16466798)
chr5 (160-224)||(22428932-22428995)
chr5 (165-239)||(19514528-19514603)
chr5 (176-239)||(37610595-37610658)
chr5 (160-214)||(5187832-5187886)
chr5 (165-239)||(10098522-10098596)
chr5 (165-239)||(25940524-25940598)
chr5 (165-239)||(25940991-25941065)
chr5 (162-224)||(34576867-34576928)
chr5 (165-239)||(37610205-37610278)
chr5 (165-239)||(37780323-37780396)
chr5 (181-239)||(42919323-42919381)
chr5 (160-224)||(22429188-22429251)
chr5 (162-224)||(22629516-22629579)
chr5 (163-214)||(23011384-23011434)
chr5 (160-239)||(41072191-41072269)
chr5 (163-224)||(9665558-9665617)
chr5 (161-214)||(9869559-9869610)
chr5 (161-239)||(11316951-11317029)
chr5 (163-212)||(23011261-23011311)
chr5 (163-214)||(9869740-9869792)
[»] chr8 (60 HSPs)
chr8 (159-239)||(13937366-13937446)
chr8 (160-239)||(13026633-13026712)
chr8 (162-239)||(13027258-13027335)
chr8 (165-239)||(9822751-9822825)
chr8 (165-239)||(9823338-9823412)
chr8 (165-239)||(22851393-22851467)
chr8 (165-239)||(39724025-39724099)
chr8 (165-214)||(15156187-15156236)
chr8 (162-239)||(34498122-34498199)
chr8 (165-216)||(12281127-12281178)
chr8 (165-239)||(3307341-3307415)
chr8 (165-239)||(13936726-13936799)
chr8 (160-214)||(15155881-15155935)
chr8 (165-239)||(17431290-17431364)
chr8 (165-239)||(41662524-41662598)
chr8 (165-214)||(765737-765786)
chr8 (165-214)||(37752418-37752467)
chr8 (165-214)||(41662405-41662454)
chr8 (165-224)||(23123341-23123400)
chr8 (160-239)||(37396706-37396785)
chr8 (165-239)||(15442766-15442840)
chr8 (160-238)||(15444625-15444703)
chr8 (161-239)||(25439103-25439180)
chr8 (165-214)||(12281428-12281477)
chr8 (175-239)||(39723415-39723479)
chr8 (160-239)||(15042143-15042222)
chr8 (165-224)||(37752087-37752146)
chr8 (160-214)||(16928940-16928994)
chr8 (165-239)||(24473745-24473819)
chr8 (165-231)||(37397130-37397196)
chr8 (165-214)||(16929244-16929293)
chr8 (165-214)||(25438795-25438844)
chr8 (165-214)||(43245874-43245923)
chr8 (165-214)||(43246178-43246227)
chr8 (160-228)||(34498543-34498611)
chr8 (166-214)||(43162541-43162588)
chr8 (163-213)||(74864-74915)
chr8 (160-239)||(6199073-6199152)
chr8 (165-216)||(43162237-43162287)
chr8 (180-226)||(6092793-6092839)
chr8 (165-239)||(20861615-20861689)
chr8 (160-214)||(22786838-22786892)
chr8 (165-239)||(24473346-24473420)
chr8 (165-214)||(34313768-34313815)
chr8 (165-214)||(3463947-3463996)
chr8 (165-214)||(41662110-41662159)
chr8 (163-214)||(22786934-22786986)
chr8 (163-211)||(37669956-37670004)
chr8 (165-216)||(22851956-22852007)
chr8 (165-231)||(9623505-9623571)
chr8 (165-239)||(16169584-16169658)
chr8 (165-214)||(18020090-18020137)
chr8 (161-239)||(33727082-33727160)
chr8 (165-214)||(74689-74737)
chr8 (163-212)||(9930662-9930710)
chr8 (176-213)||(9930842-9930879)
chr8 (163-215)||(11007655-11007708)
chr8 (165-209)||(9465610-9465653)
chr8 (182-214)||(9465876-9465908)
chr8 (167-214)||(18019915-18019963)
[»] chr6 (34 HSPs)
chr6 (153-239)||(33829613-33829699)
chr6 (165-239)||(33828993-33829067)
chr6 (165-239)||(7654525-7654599)
chr6 (148-214)||(3403991-3404059)
chr6 (165-214)||(18241857-18241906)
chr6 (160-216)||(21032280-21032336)
chr6 (165-223)||(3403720-3403778)
chr6 (165-239)||(10087835-10087909)
chr6 (165-239)||(33974276-33974350)
chr6 (162-239)||(32733973-32734050)
chr6 (161-212)||(31598732-31598782)
chr6 (162-212)||(12714431-12714481)
chr6 (165-239)||(22755066-22755140)
chr6 (160-214)||(30388364-30388418)
chr6 (163-214)||(21032101-21032153)
chr6 (160-214)||(10039674-10039727)
chr6 (165-214)||(11656784-11656833)
chr6 (166-209)||(31598157-31598201)
chr6 (166-209)||(31598641-31598685)
chr6 (165-212)||(30388065-30388111)
chr6 (165-231)||(2354795-2354861)
chr6 (169-239)||(13177033-13177102)
chr6 (176-238)||(29074350-29074412)
chr6 (176-238)||(29079114-29079176)
chr6 (176-238)||(29106923-29106985)
chr6 (165-214)||(3825530-3825578)
chr6 (165-214)||(18242158-18242207)
chr6 (165-214)||(21031982-21032030)
chr6 (165-214)||(23250595-23250643)
chr6 (167-214)||(2762611-2762659)
chr6 (167-214)||(10039845-10039893)
chr6 (167-214)||(11656608-11656656)
chr6 (167-214)||(18242034-18242082)
chr6 (163-218)||(23250768-23250823)
[»] chr1 (71 HSPs)
chr1 (165-239)||(39691977-39692051)
chr1 (165-239)||(6002240-6002314)
chr1 (165-239)||(49284412-49284486)
chr1 (159-239)||(28634134-28634214)
chr1 (165-239)||(6002871-6002945)
chr1 (161-239)||(42611184-42611262)
chr1 (161-239)||(48104677-48104755)
chr1 (162-239)||(42611591-42611668)
chr1 (162-239)||(50430058-50430135)
chr1 (159-214)||(8108718-8108773)
chr1 (165-224)||(8108985-8109044)
chr1 (161-216)||(22149699-22149754)
chr1 (160-239)||(26815096-26815175)
chr1 (160-239)||(32163020-32163099)
chr1 (165-239)||(9347129-9347203)
chr1 (165-239)||(26814697-26814771)
chr1 (162-239)||(46823843-46823920)
chr1 (165-214)||(47955309-47955358)
chr1 (147-223)||(48191348-48191424)
chr1 (163-214)||(1176837-1176888)
chr1 (160-239)||(44911023-44911102)
chr1 (165-224)||(48190774-48190833)
chr1 (161-239)||(999111-999188)
chr1 (165-239)||(13918844-13918918)
chr1 (165-239)||(20480171-20480244)
chr1 (165-239)||(21687028-21687102)
chr1 (160-214)||(47955610-47955664)
chr1 (165-239)||(48105093-48105167)
chr1 (165-239)||(50526449-50526523)
chr1 (166-239)||(50949542-50949615)
chr1 (159-239)||(28633717-28633797)
chr1 (160-239)||(6703458-6703537)
chr1 (159-214)||(31848194-31848249)
chr1 (165-239)||(6703871-6703945)
chr1 (153-239)||(9347528-9347613)
chr1 (165-239)||(13918449-13918523)
chr1 (165-239)||(27172119-27172192)
chr1 (165-239)||(27172518-27172592)
chr1 (185-239)||(49285032-49285086)
chr1 (165-211)||(50615243-50615289)
chr1 (165-239)||(50615598-50615671)
chr1 (165-211)||(50623071-50623117)
chr1 (165-239)||(50623426-50623499)
chr1 (165-238)||(4692411-4692484)
chr1 (165-214)||(17518604-17518652)
chr1 (162-238)||(50949161-50949237)
chr1 (165-239)||(20371043-20371115)
chr1 (165-212)||(41082912-41082959)
chr1 (159-214)||(41083213-41083267)
chr1 (160-239)||(44911414-44911493)
chr1 (160-214)||(1177020-1177074)
chr1 (160-214)||(19008752-19008806)
chr1 (165-239)||(46824255-46824329)
chr1 (165-239)||(50429659-50429733)
chr1 (165-214)||(13589661-13589709)
chr1 (165-238)||(21687445-21687517)
chr1 (165-222)||(33085674-33085731)
chr1 (159-239)||(999502-999581)
chr1 (165-237)||(20480591-20480662)
chr1 (161-212)||(31847894-31847945)
chr1 (160-214)||(17518301-17518354)
chr1 (149-211)||(19007722-19007783)
chr1 (163-212)||(31848017-31848067)
chr1 (160-214)||(39690792-39690846)
chr1 (165-219)||(47498492-47498545)
chr1 (165-239)||(49318143-49318216)
chr1 (165-214)||(20371355-20371403)
chr1 (165-214)||(22149406-22149453)
chr1 (163-215)||(22149579-22149632)
chr1 (165-238)||(49317755-49317827)
chr1 (165-238)||(49318421-49318493)
[»] chr4 (66 HSPs)
chr4 (162-239)||(36096452-36096529)
chr4 (159-239)||(50678776-50678856)
chr4 (161-239)||(43050606-43050684)
chr4 (165-239)||(36095820-36095894)
chr4 (165-239)||(50679401-50679475)
chr4 (160-239)||(39744442-39744521)
chr4 (160-239)||(45830173-45830252)
chr4 (159-226)||(56505690-56505757)
chr4 (165-239)||(43051229-43051303)
chr4 (160-239)||(9023242-9023321)
chr4 (160-239)||(28196344-28196423)
chr4 (165-239)||(169416-169490)
chr4 (165-239)||(293194-293268)
chr4 (165-239)||(9023657-9023731)
chr4 (165-223)||(24775776-24775834)
chr4 (165-239)||(25161881-25161955)
chr4 (165-239)||(28196750-28196824)
chr4 (165-239)||(32703627-32703701)
chr4 (160-238)||(47219179-47219257)
chr4 (165-214)||(13198908-13198957)
chr4 (159-239)||(9380718-9380798)
chr4 (160-239)||(292780-292859)
chr4 (165-239)||(4239343-4239417)
chr4 (165-239)||(9380310-9380384)
chr4 (165-239)||(11529171-11529245)
chr4 (160-214)||(16555513-16555567)
chr4 (165-239)||(43292040-43292114)
chr4 (165-214)||(22681578-22681626)
chr4 (165-238)||(23540230-23540303)
chr4 (151-239)||(32703214-32703302)
chr4 (166-214)||(49178818-49178866)
chr4 (165-239)||(169016-169091)
chr4 (165-224)||(16555809-16555868)
chr4 (159-214)||(22681881-22681936)
chr4 (165-239)||(26207723-26207797)
chr4 (165-239)||(39086600-39086674)
chr4 (159-239)||(56506551-56506631)
chr4 (160-223)||(5205986-5206049)
chr4 (165-212)||(11241392-11241439)
chr4 (163-214)||(13198604-13198655)
chr4 (160-239)||(39744028-39744107)
chr4 (180-239)||(44468900-44468959)
chr4 (160-214)||(3930482-3930535)
chr4 (165-214)||(8181994-8182044)
chr4 (161-239)||(12757766-12757843)
chr4 (165-239)||(26207364-26207437)
chr4 (165-239)||(43292334-43292408)
chr4 (165-214)||(5206232-5206280)
chr4 (165-214)||(18077204-18077253)
chr4 (159-227)||(23432473-23432542)
chr4 (162-239)||(48406362-48406438)
chr4 (160-224)||(11241653-11241716)
chr4 (163-210)||(24775642-24775690)
chr4 (167-214)||(49178644-49178692)
chr4 (180-239)||(25162290-25162349)
chr4 (165-239)||(45828997-45829071)
chr4 (165-239)||(48405965-48406038)
chr4 (167-215)||(16555694-16555743)
chr4 (159-239)||(23539838-23539916)
chr4 (165-214)||(25225400-25225449)
chr4 (242-271)||(36095934-36095963)
chr4 (194-239)||(39912464-39912509)
chr4 (165-214)||(54508818-54508867)
chr4 (165-213)||(7603422-7603469)
chr4 (167-214)||(27304895-27304943)
chr4 (150-214)||(35393778-35393841)
[»] chr3 (61 HSPs)
chr3 (242-310)||(1927859-1927927)
chr3 (151-239)||(1928411-1928498)
chr3 (165-239)||(8314016-8314090)
chr3 (153-239)||(48159888-48159974)
chr3 (165-238)||(53687891-53687964)
chr3 (160-238)||(47665909-47665987)
chr3 (165-214)||(10293911-10293960)
chr3 (165-214)||(20969021-20969070)
chr3 (162-239)||(27238877-27238954)
chr3 (162-239)||(53766163-53766240)
chr3 (159-239)||(3353528-3353607)
chr3 (160-239)||(26007596-26007675)
chr3 (165-239)||(26007185-26007258)
chr3 (165-239)||(42673273-42673346)
chr3 (165-239)||(48160310-48160384)
chr3 (165-214)||(20968721-20968770)
chr3 (165-237)||(3353131-3353202)
chr3 (159-239)||(40848938-40849018)
chr3 (160-211)||(42455788-42455839)
chr3 (160-214)||(8315084-8315137)
chr3 (181-239)||(21896488-21896546)
chr3 (165-239)||(22429161-22429235)
chr3 (165-239)||(22429573-22429646)
chr3 (160-238)||(36180968-36181046)
chr3 (165-239)||(47666312-47666386)
chr3 (165-214)||(1927775-1927824)
chr3 (165-214)||(10293611-10293660)
chr3 (166-214)||(4947263-4947311)
chr3 (160-216)||(14015692-14015748)
chr3 (167-214)||(18874887-18874934)
chr3 (160-239)||(27238463-27238542)
chr3 (159-214)||(45060873-45060928)
chr3 (165-239)||(10348776-10348850)
chr3 (165-239)||(40848524-40848597)
chr3 (165-239)||(42672981-42673054)
chr3 (165-214)||(3644785-3644834)
chr3 (153-214)||(9026727-9026787)
chr3 (165-214)||(18875193-18875242)
chr3 (165-214)||(47871124-47871172)
chr3 (163-214)||(1101092-1101143)
chr3 (182-238)||(10771523-10771579)
chr3 (163-214)||(13657623-13657675)
chr3 (163-213)||(14015873-14015925)
chr3 (165-213)||(17441066-17441114)
chr3 (162-214)||(23630037-23630089)
chr3 (165-240)||(36180559-36180632)
chr3 (160-223)||(14015957-14016019)
chr3 (165-224)||(17372301-17372360)
chr3 (184-239)||(28702299-28702354)
chr3 (165-239)||(10348482-10348556)
chr3 (167-216)||(18875017-18875067)
chr3 (165-239)||(24485437-24485510)
chr3 (164-214)||(26540693-26540742)
chr3 (165-239)||(44007970-44008044)
chr3 (165-214)||(1100918-1100967)
chr3 (160-224)||(21895655-21895720)
chr3 (165-210)||(45060599-45060644)
chr3 (165-214)||(53766581-53766630)
chr3 (167-214)||(10293735-10293783)
chr3 (163-214)||(17372475-17372527)
chr3 (195-239)||(42456172-42456216)
[»] chr2 (58 HSPs)
chr2 (159-239)||(2639459-2639539)
chr2 (160-239)||(26841585-26841664)
chr2 (164-239)||(7591203-7591278)
chr2 (165-239)||(18296079-18296153)
chr2 (165-239)||(26842215-26842289)
chr2 (152-239)||(7664238-7664325)
chr2 (165-239)||(2638823-2638897)
chr2 (165-239)||(7591827-7591901)
chr2 (161-239)||(8851147-8851225)
chr2 (165-239)||(8851559-8851633)
chr2 (153-214)||(30190914-30190975)
chr2 (165-239)||(7664650-7664724)
chr2 (161-239)||(26692395-26692473)
chr2 (165-239)||(37720207-37720281)
chr2 (151-216)||(6495721-6495786)
chr2 (165-214)||(20347466-20347515)
chr2 (162-239)||(26692797-26692874)
chr2 (165-224)||(18296685-18296744)
chr2 (165-224)||(24832334-24832393)
chr2 (160-239)||(41790889-41790968)
chr2 (165-239)||(6325324-6325398)
chr2 (165-214)||(6171458-6171507)
chr2 (165-214)||(11883626-11883675)
chr2 (165-214)||(11883928-11883977)
chr2 (162-223)||(18055309-18055370)
chr2 (165-214)||(30191227-30191276)
chr2 (161-214)||(40469731-40469784)
chr2 (163-214)||(15920779-15920830)
chr2 (159-214)||(20347160-20347215)
chr2 (160-214)||(5378659-5378713)
chr2 (165-215)||(6171159-6171208)
chr2 (169-239)||(6324924-6324994)
chr2 (165-239)||(16910830-16910904)
chr2 (165-239)||(17850981-17851054)
chr2 (165-239)||(18750103-18750176)
chr2 (160-214)||(29230280-29230334)
chr2 (164-214)||(29343583-29343633)
chr2 (161-214)||(32673145-32673197)
chr2 (162-239)||(41790491-41790567)
chr2 (154-214)||(5379961-5380021)
chr2 (163-214)||(43495486-43495537)
chr2 (161-239)||(5793446-5793524)
chr2 (165-239)||(16911246-16911319)
chr2 (165-239)||(38490818-38490891)
chr2 (165-214)||(6495470-6495518)
chr2 (165-214)||(26737783-26737832)
chr2 (163-214)||(15321513-15321564)
chr2 (165-231)||(19141447-19141512)
chr2 (162-239)||(19141826-19141901)
chr2 (190-239)||(7979593-7979642)
chr2 (165-214)||(32672845-32672894)
chr2 (165-214)||(40469430-40469479)
chr2 (167-215)||(40469606-40469655)
chr2 (167-214)||(6171335-6171383)
chr2 (165-212)||(15321395-15321440)
chr2 (163-214)||(18055167-18055219)
chr2 (167-214)||(26737658-26737706)
chr2 (165-209)||(43495312-43495356)
[»] chr7 (60 HSPs)
chr7 (165-239)||(44599492-44599566)
chr7 (165-239)||(44600112-44600186)
chr7 (160-239)||(13863311-13863390)
chr7 (162-239)||(18863967-18864044)
chr7 (160-239)||(20418886-20418965)
chr7 (165-239)||(20419301-20419375)
chr7 (165-239)||(22740159-22740233)
chr7 (153-239)||(37889236-37889322)
chr7 (160-239)||(8643743-8643822)
chr7 (160-239)||(10533032-10533111)
chr7 (165-239)||(3205070-3205144)
chr7 (165-239)||(9035270-9035344)
chr7 (160-214)||(9412327-9412381)
chr7 (165-239)||(13863934-13864007)
chr7 (165-239)||(17156970-17157044)
chr7 (165-239)||(37888836-37888910)
chr7 (165-239)||(37972373-37972447)
chr7 (165-214)||(3687658-3687707)
chr7 (165-230)||(38826899-38826964)
chr7 (163-239)||(22740568-22740643)
chr7 (160-239)||(46816288-46816367)
chr7 (165-239)||(13744210-13744283)
chr7 (165-214)||(9412026-9412075)
chr7 (165-238)||(48359323-48359395)
chr7 (152-212)||(27096346-27096405)
chr7 (152-212)||(27181898-27181957)
chr7 (160-239)||(37971958-37972037)
chr7 (165-214)||(3687356-3687406)
chr7 (165-239)||(13741560-13741634)
chr7 (165-239)||(29292925-29292999)
chr7 (165-214)||(13772903-13772952)
chr7 (153-224)||(15567266-15567334)
chr7 (161-230)||(36527383-36527451)
chr7 (160-239)||(9034865-9034945)
chr7 (160-223)||(13772639-13772702)
chr7 (160-239)||(18864379-18864457)
chr7 (165-225)||(5349724-5349781)
chr7 (164-210)||(5735553-5735599)
chr7 (160-214)||(6908211-6908264)
chr7 (160-210)||(23686723-23686773)
chr7 (165-239)||(29293323-29293397)
chr7 (155-231)||(3204662-3204736)
chr7 (153-214)||(6908486-6908546)
chr7 (165-214)||(8953891-8953939)
chr7 (159-239)||(42419005-42419085)
chr7 (165-213)||(5735255-5735303)
chr7 (153-212)||(38191253-38191312)
chr7 (165-215)||(18925065-18925115)
chr7 (161-213)||(8953601-8953651)
chr7 (166-214)||(18925231-18925280)
chr7 (164-212)||(27096167-27096216)
chr7 (164-212)||(27182087-27182136)
chr7 (165-214)||(29291809-29291858)
chr7 (165-214)||(30857906-30857955)
chr7 (165-214)||(38191567-38191616)
chr7 (165-214)||(39983702-39983751)
chr7 (163-214)||(5735376-5735428)
chr7 (167-223)||(33628653-33628709)
chr7 (163-214)||(34235857-34235909)
chr7 (180-224)||(35080215-35080259)
[»] scaffold0328 (2 HSPs)
scaffold0328 (165-239)||(6772-6846)
scaffold0328 (165-239)||(6155-6229)
[»] scaffold0460 (2 HSPs)
scaffold0460 (165-239)||(333-407)
scaffold0460 (165-239)||(740-813)
[»] scaffold0017 (2 HSPs)
scaffold0017 (165-239)||(185251-185325)
scaffold0017 (165-239)||(184842-184916)
[»] scaffold0802 (2 HSPs)
scaffold0802 (165-214)||(1121-1170)
scaffold0802 (165-214)||(1422-1471)
[»] scaffold0319 (2 HSPs)
scaffold0319 (165-214)||(6397-6446)
scaffold0319 (165-214)||(6699-6747)
[»] scaffold0192 (1 HSPs)
scaffold0192 (165-214)||(25371-25420)
[»] scaffold0001 (5 HSPs)
scaffold0001 (165-214)||(438933-438982)
scaffold0001 (162-214)||(183364-183415)
scaffold0001 (160-212)||(439203-439255)
scaffold0001 (165-208)||(183670-183713)
scaffold0001 (163-212)||(183544-183594)
[»] scaffold0598 (2 HSPs)
scaffold0598 (165-216)||(6610-6661)
scaffold0598 (165-214)||(6878-6925)
[»] scaffold1221 (1 HSPs)
scaffold1221 (162-216)||(1784-1837)
[»] scaffold0110 (2 HSPs)
scaffold0110 (160-214)||(45809-45862)
scaffold0110 (165-213)||(45540-45587)
[»] scaffold0176 (2 HSPs)
scaffold0176 (159-228)||(20031-20100)
scaffold0176 (165-239)||(19624-19697)
[»] scaffold0002 (1 HSPs)
scaffold0002 (165-214)||(411926-411974)
[»] scaffold0535 (1 HSPs)
scaffold0535 (165-212)||(10015-10062)
[»] scaffold0069 (2 HSPs)
scaffold0069 (165-239)||(50078-50150)
scaffold0069 (165-214)||(50509-50557)
[»] scaffold0041 (1 HSPs)
scaffold0041 (165-239)||(38672-38746)
[»] scaffold0035 (1 HSPs)
scaffold0035 (163-214)||(73087-73139)
[»] scaffold0029 (1 HSPs)
scaffold0029 (165-239)||(9908-9983)
[»] scaffold0015 (1 HSPs)
scaffold0015 (165-214)||(17158-17206)


Alignment Details
Target: chr5 (Bit Score: 286; Significance: 1e-160; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 9 - 310
Target Start/End: Original strand, 31569754 - 31570054
Alignment:
Q  9 gataatactgttgtgtgatcttttcgtcttttctcttgtttaattttacttcagtggactaatcatcaaattttgaaatgtttaaagtaatacatgcttt 108  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  31569754 gataatattgttgtgtgatcttttcgtcttttctcttgtttaattttacttcagtggactaatcatcaaattttgaaatgtttaaagtaatacatacttt 31569853  T
Q  109 ttgagattattgtttatgaaagaagaatcaaatatttatctaataaaaagataggtttaattgcacttttcccccctatcttttgtcaattgtgcgattt 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  31569854 ttgagattattgtttatgaaagaagaatcaaatatttatctaataaaaagataggtttaattgcactttt-ccccctatcttttgtcaattgtgcgattt 31569952  T
Q  209 tgcacctcatgtttttaaacgagtgattttgaaatgtattttagtgatgatgtgtctgattttaatttgatgtgcatgcaatgtaatatgaaaaacctaa 308  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31569953 tgcacctcatgtttttaaacgagtgattttgaaatgtattttagtgatgatgtgtctgattttaatttgatgtgcatgcaatgtaatatgaaaaacctaa 31570052  T
Q  309 aa 310  Q
    ||    
T  31570053 aa 31570054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 18817662 - 18817588
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||| |||||||    
T  18817662 ttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttg 18817588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 160 - 239
Target Start/End: Original strand, 18816950 - 18817029
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||| ||||||||| ||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||| |||||||    
T  18816950 taggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttg 18817029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 160 - 238
Target Start/End: Complemental strand, 11351483 - 11351405
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgatttt 238  Q
    |||||||||||||||||||| | ||||||||||| |||||||||||||||||||| ||| |||||||||||| ||||||    
T  11351483 taggtttaattgcacttttcactcctatcttttgccaattgtgcgattttgcaccccatatttttaaacgagcgatttt 11351405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 19515014 - 19514940
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||| |||  |||||||||||| ||||||    
T  19515014 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagttattttg 19514940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 162 - 239
Target Start/End: Original strand, 21207226 - 21207303
Alignment:
Q  162 ggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||||||||||||||||  |||| |||||||||||||||||||| |||  ||||||||||| |||||||    
T  21207226 ggtttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttg 21207303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 160 - 239
Target Start/End: Original strand, 12498565 - 12498644
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||| |||||||||||||||||||||||  |||| |||||||||||||||||||| |||  ||||||||||| |||||||    
T  12498565 taggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttg 12498644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 160 - 239
Target Start/End: Original strand, 26570727 - 26570806
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||| |||||| ||||||||||||||||  ||||||||||||||||||||||||| |||  ||||||||||| |||||||    
T  26570727 taggcttaattacacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttg 26570806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 160 - 239
Target Start/End: Complemental strand, 26571220 - 26571141
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||| |||||||||||||||||||||||  |||| |||||||||||||||||||| |||  ||||||||||| |||||||    
T  26571220 taggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttg 26571141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 160 - 239
Target Start/End: Complemental strand, 43464247 - 43464169
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||| ||||||||||||||||||| |||  |||||||||||||||||||||||||||||  ||||||||||| |||||||    
T  43464247 taggcttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcacctcatagttttaaacgagcgattttg 43464169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 25116117 - 25116063
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  25116117 taggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcacc 25116063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 25175207 - 25175153
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  25175207 taggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcacc 25175153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 34147561 - 34147487
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||||||||||||| ||||||||  ||||||||||||||||||||||||||| |  ||||||||||| |||||||    
T  34147561 ttaattgcactttttccccctatagtttgtcaattgtgcgattttgcacctcgtagttttaaacgagcgattttg 34147487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 18433367 - 18433318
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  18433367 ttaattgcacttttcccccctatcttttgttaattgtgcgattttgcacc 18433318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 159 - 238
Target Start/End: Complemental strand, 10098997 - 10098919
Alignment:
Q  159 ataggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgatttt 238  Q
    |||||||||||||||||||||| || |||  ||||||||||||||||||||||||| |||  ||||||||||| ||||||    
T  10098997 ataggtttaattgcacttttcctcc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgatttt 10098919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 160 - 239
Target Start/End: Complemental strand, 12498984 - 12498905
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||| |||||||||||||||||||||||  |||| |||||||||||||||||||| |||  |||||||| || |||||||    
T  12498984 taggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacaagcgattttg 12498905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 165 - 224
Target Start/End: Original strand, 18433018 - 18433077
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgttttt 224  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||| ||| |||||    
T  18433018 ttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccatcttttt 18433077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 161 - 239
Target Start/End: Original strand, 2817148 - 2817226
Alignment:
Q  161 aggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||||||||||||||||||| ||||||  |||| |||||||||||||||||| | |||  ||||||||||| |||||||    
T  2817148 aggtttaattgcacttttcctccctatagtttgccaattgtgcgattttgcatcccataattttaaacgagcgattttg 2817226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 11350811 - 11350884
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||| ||||| ||||||||||||| ||||||||| |||||||||| ||| |||||||||||| |||||||    
T  11350811 ttaattgcatttttcacccctatcttttgccaattgtgc-attttgcaccccatatttttaaacgagcgattttg 11350884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 160 - 214
Target Start/End: Original strand, 25115755 - 25115809
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    |||| ||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  25115755 taggcttaattgcacttttcccccctatcttttgccaattgtgtgattttgcacc 25115809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 160 - 214
Target Start/End: Original strand, 25174847 - 25174901
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    |||| ||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  25174847 taggcttaattgcacttttcccccctatcttttgccaattgtgtgattttgcacc 25174901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 37780793 - 37780719
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||| |||||||||||||||  ||||  |||||||||||||||||||||||  ||||||||||| |||||||    
T  37780793 ttaattgtacttttcccccctatagtttgctaattgtgcgattttgcacctcattgttttaaacgagcgattttg 37780719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 160 - 214
Target Start/End: Original strand, 41382891 - 41382944
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  41382891 taggtttaattgca-ttttcccccctatcttttgttaattgtgcgattttgcacc 41382944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 16726084 - 16726132
Alignment:
Q  168 attgcacttttcccccctatcttttgtcaattgtgcgattttgcacctc 216  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  16726084 attgcacttttgccccctatcttttgccaattgtgcgattttgcacctc 16726132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 165 - 224
Target Start/End: Original strand, 26020453 - 26020512
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgttttt 224  Q
    |||||||||||||||| ||||||||||||  ||||||||||||||||||| ||| |||||    
T  26020453 ttaattgcacttttcctccctatcttttgctaattgtgcgattttgcaccccatcttttt 26020512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 3888242 - 3888316
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||||||||| ||||||||||||  |||| ||||||| |||||||||||| |||  ||||||||||| |||||||    
T  3888242 ttaattgcacatttcccccctatagtttgccaattgtacgattttgcaccccatagttttaaacgagcgattttg 3888316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 161 - 239
Target Start/End: Complemental strand, 3888717 - 3888639
Alignment:
Q  161 aggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||||||||||| | |||  |||| ||||||| |||||||||||| |||  ||||||||||| |||||||    
T  3888717 aggtttaattgcacttttccctcttataatttgccaattgtacgattttgcaccccatagttttaaacgagcgattttg 3888639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 22729011 - 22729084
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||||||||| |||  ||||| |||||||||||||||||| ||||  ||||||||||| |||||||    
T  22729011 ttaattgcacttttccccc-tatagtttgtaaattgtgcgattttgcacttcatagttttaaacgagcgattttg 22729084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 22729490 - 22729417
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||||||||| |||  |||| |||||||||||||||||||| |||  ||||||||||| |||||||    
T  22729490 ttaattgcacttttccccc-tataatttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttg 22729417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 33324894 - 33324840
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    |||| ||||||||||||||  |||||||||||||||||||||| |||||||||||    
T  33324894 taggcttaattgcacttttttcccctatcttttgtcaattgtgtgattttgcacc 33324840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 161 - 239
Target Start/End: Original strand, 43463755 - 43463832
Alignment:
Q  161 aggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||||||||||||  |||  |||| |||||||||||||||||||| |||  ||||||||||| |||||||    
T  43463755 aggtttaattgcacttttcccct-tatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttg 43463832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 163 - 210
Target Start/End: Complemental strand, 12441244 - 12441196
Alignment:
Q  163 gtttaattgcacttttcccccctatc-ttttgtcaattgtgcgattttg 210  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  12441244 gtttaattgcacttttgccccctatctttttgtcaattgtgcgattttg 12441196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 16466798 - 16466746
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgca 212  Q
    |||| ||||||||||||||||||||||| |||||  |||||||||||||||||    
T  16466798 taggcttaattgcacttttcccccctatattttgctaattgtgcgattttgca 16466746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 22428932 - 22428995
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgttttt 224  Q
    |||| ||||||||||||| |||||||||||||||  ||||||||||||||||||| ||| |||||    
T  22428932 taggcttaattgcacttt-cccccctatcttttgctaattgtgcgattttgcaccccatcttttt 22428995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 19514528 - 19514603
Alignment:
Q  165 ttaattgcacttttcccccc-tatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||| |||||| |||  |||| |||||||||||||||||||| |||  ||||||||||| |||||||    
T  19514528 ttaattgcactttcccccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttg 19514603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 176 - 239
Target Start/End: Complemental strand, 37610658 - 37610595
Alignment:
Q  176 tttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||  ||||  |||||||||||||||||||||||  ||||||||||| |||||||    
T  37610658 tttcccccctatagtttgctaattgtgcgattttgcacctcattgttttaaacgagcgattttg 37610595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 5187886 - 5187832
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    |||| |||||||||||||| |||| |||||||||| |||||||| ||||||||||    
T  5187886 taggcttaattgcacttttgccccttatcttttgttaattgtgcaattttgcacc 5187832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 10098522 - 10098596
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||||||||||||| || |||||  ||||||||||||||||||||||| |  ||  ||||||||||| |||||||    
T  10098522 ttaattgcactttttcctcctatagtttgtcaattgtgcgattttgcatcctatagttttaaacgagcgattttg 10098596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 25940524 - 25940598
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||| ||||  |||||||  |||||||||||||||||||||||||  ||  ||||||||||| |||||||    
T  25940524 ttaattgcatttttttcccctatagtttgtcaattgtgcgattttgcaccctatagttttaaacgagcgattttg 25940598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 25941065 - 25940991
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||||||| |||||  ||||| |||| |||||||||||| | |||  ||||||||||| |||||||    
T  25941065 ttaattgcacttttccctcctatagtttgttaattatgcgattttgcatcccatagttttaaacgagcgattttg 25940991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 224
Target Start/End: Original strand, 34576867 - 34576928
Alignment:
Q  162 ggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgttttt 224  Q
    |||||||||||||||| |||||||||||||||  |||||||||||||| |||| ||| |||||    
T  34576867 ggtttaattgcacttt-cccccctatcttttgctaattgtgcgattttacaccccatcttttt 34576928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 37610205 - 37610278
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||||||||| |||  |||| |||||||| ||||||||||| |||  ||||||||||| |||||||    
T  37610205 ttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcaccccatagttttaaacgagcgattttg 37610278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 37780323 - 37780396
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||||||||| |||  |||| |||||||| ||||||||||| |||  ||||||||||| |||||||    
T  37780323 ttaattgcacttttccccc-tatagtttgccaattgtgtgattttgcaccccatagttttaaacgagcgattttg 37780396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 42919323 - 42919381
Alignment:
Q  181 cccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||| ||||  ||||||||||||||| |||| |||||||||||||||| |||||||    
T  42919323 cccctatatttttccaattgtgcgatttttcaccacatgtttttaaacgagcgattttg 42919381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 22429251 - 22429188
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgttttt 224  Q
    |||| ||||||||| ||||||||| |||||||||  ||||||||||||||||||| ||| |||||    
T  22429251 taggcttaattgcatttttccccc-tatcttttgctaattgtgcgattttgcaccccatcttttt 22429188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 224
Target Start/End: Complemental strand, 22629579 - 22629516
Alignment:
Q  162 ggtttaattgcacttttcccc-cctatcttttgtcaattgtgcgattttgcacctcatgttttt 224  Q
    ||||||||||||||||| ||| ||||||||||||||||| ||  |||||||||| ||| |||||    
T  22629579 ggtttaattgcactttttccctcctatcttttgtcaattatgtaattttgcaccccattttttt 22629516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 163 - 214
Target Start/End: Complemental strand, 23011434 - 23011384
Alignment:
Q  163 gtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    |||||||||||||||| |||  |||||||||| |||||||||||||||||||    
T  23011434 gtttaattgcactttttccct-tatcttttgttaattgtgcgattttgcacc 23011384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 160 - 239
Target Start/End: Complemental strand, 41072269 - 41072191
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||| ||||||||| || |||  |||||||||||| ||||||||||||  ||  ||||||||||| |||||||    
T  41072269 taggtttaattacacttttcctcc-tatagtttgtcaattgtacgattttgcaccctatagttttaaacgagcgattttg 41072191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 224
Target Start/End: Original strand, 9665558 - 9665617
Alignment:
Q  163 gtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgttttt 224  Q
    ||||||||||||||||||||  |||||||||  |||||||| |||||||||| ||| |||||    
T  9665558 gtttaattgcacttttcccc--tatcttttgctaattgtgcaattttgcaccccatcttttt 9665617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 214
Target Start/End: Original strand, 9869559 - 9869610
Alignment:
Q  161 aggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    |||||||||||||||||||| |||||  |||||  |||||||||||||||||||    
T  9869559 aggtttaattgcacttttcctcccta--ttttgctaattgtgcgattttgcacc 9869610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 239
Target Start/End: Complemental strand, 11317029 - 11316951
Alignment:
Q  161 aggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||||||||  || || |  |||| |||||||||||||||||||| |||  ||||||| ||| |||||||    
T  11317029 aggtttaattgcacttttttcctctgtactttgccaattgtgcgattttgcaccccattgttttaaatgagcgattttg 11316951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 212
Target Start/End: Complemental strand, 23011311 - 23011261
Alignment:
Q  163 gtttaattgcacttttcccccctatctttt-gtcaattgtgcgattttgca 212  Q
    ||||||||||| |||| ||||||||||||| | ||||||||||||||||||    
T  23011311 gtttaattgcaattttgccccctatcttttagccaattgtgcgattttgca 23011261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 163 - 214
Target Start/End: Complemental strand, 9869792 - 9869740
Alignment:
Q  163 gtttaattgcacttttcccccctatc-ttttgtcaattgtgcgattttgcacc 214  Q
    |||||||||||||||| |||||| || ||||  ||||||||||||||||||||    
T  9869792 gtttaattgcacttttgccccctgtctttttaccaattgtgcgattttgcacc 9869740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 65; Significance: 1e-28; HSPs: 60)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 13937446 - 13937366
Alignment:
Q  159 ataggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  13937446 ataggcttaattgcacttttcccccctattttttgtcaattgtgcgaatttgcaccccatgtttttaaacgagtgattttg 13937366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 160 - 239
Target Start/End: Original strand, 13026633 - 13026712
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  13026633 taggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcacctcatgtttttaaacgagcgattttg 13026712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 162 - 239
Target Start/End: Complemental strand, 13027335 - 13027258
Alignment:
Q  162 ggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||| |||||||    
T  13027335 ggtttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttg 13027258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 9822751 - 9822825
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||    
T  9822751 ttaattgcacttttcacccctatcttttatcaattgtgcgattttgcaccccatgtttttaaacgagcgattttg 9822825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 9823412 - 9823338
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||| |||||||    
T  9823412 ttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttg 9823338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 22851393 - 22851467
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| || |||||||    
T  22851393 ttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatgtttttaaacaagcgattttg 22851467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 39724099 - 39724025
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||| |||||||    
T  39724099 ttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttg 39724025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 15156236 - 15156187
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15156236 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 15156187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 162 - 239
Target Start/End: Original strand, 34498122 - 34498199
Alignment:
Q  162 ggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||||||| ||||||||  ||||||||||||||||||||||||| |||  ||||||||||| |||||||    
T  34498122 ggtttaattgcactttttccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttg 34498199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 165 - 216
Target Start/End: Original strand, 12281127 - 12281178
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctc 216  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  12281127 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacctc 12281178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 3307341 - 3307415
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||| | ||| ||||||||| || |||||||    
T  3307341 ttaattgcatttttcacccctatcttttgtcaattgtgcgattttgcatcccatatttttaaacaagcgattttg 3307415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 13936726 - 13936799
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||||||||||||||||| |||||||||  |||||||||||||||||||| ||| |||||||||||| |||||||    
T  13936726 ttaattgcacttttcccc-ctatcttttaccaattgtgcgattttgcaccccatatttttaaacgagcgattttg 13936799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 160 - 214
Target Start/End: Original strand, 15155881 - 15155935
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  15155881 taggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcacc 15155935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 17431290 - 17431364
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||||||||| |||  |||||||||||||||||||| ||||||||  ||||||||||| |||||||    
T  17431290 ttaattgcacttttcccccatatagtttgtcaattgtgcgatttttcacctcatagttttaaacgagcgattttg 17431364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 41662524 - 41662598
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||||||||| |||  |||| ||||||||||||||||||||||||  ||||||||||| |||||||    
T  41662524 ttaattgcacttttcccccatatagtttgccaattgtgcgattttgcacctcatagttttaaacgagcgattttg 41662598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 765737 - 765786
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  765737 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 765786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 37752467 - 37752418
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  37752467 ttaattgcacttttcccccctatcttttgttaattgtgcgattttgcacc 37752418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 41662454 - 41662405
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  41662454 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 41662405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 165 - 224
Target Start/End: Original strand, 23123341 - 23123400
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgttttt 224  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||| ||| |||||    
T  23123341 ttaattgcacttttccctcctatcttttgtcaattgtgcgattttacaccccatcttttt 23123400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 160 - 239
Target Start/End: Original strand, 37396706 - 37396785
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||| |||||||||||||||||||||||  |||| | |||||||||||||||||| |||  ||||||||||| |||||||    
T  37396706 taggcttaattgcacttttcccccctatagtttgccgattgtgcgattttgcaccccatagttttaaacgagcgattttg 37396785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 15442766 - 15442840
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||| ||||||||||||| ||| | |||||||| ||||||||||| |||||||||||||| | |||||||    
T  15442766 ttaattgcatttttcccccctatatttcgccaattgtgtgattttgcaccccatgtttttaaacgtgcgattttg 15442840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 160 - 238
Target Start/End: Complemental strand, 15444703 - 15444625
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgatttt 238  Q
    ||||||||||||||||||| ||||||||  |||  |||||||||||||||||||| |||  ||||||||||| ||||||    
T  15444703 taggtttaattgcactttttccccctataatttaccaattgtgcgattttgcaccccatagttttaaacgagcgatttt 15444625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 161 - 239
Target Start/End: Complemental strand, 25439180 - 25439103
Alignment:
Q  161 aggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||||||||||||||||| |||| |||  ||||||||||||||||||||||||| |||  ||||||||||| |||||||    
T  25439180 aggtttaattgcactttttcccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttg 25439103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 12281477 - 12281428
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  12281477 ttaattgcacttttcccccttatcttttgttaattgtgcgattttgcacc 12281428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 175 - 239
Target Start/End: Original strand, 39723415 - 39723479
Alignment:
Q  175 ttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||| || |||||||||| |||||||||||||||||| | |||||||||||||||| |||||||    
T  39723415 ttttcacctctatcttttgccaattgtgcgattttgcatcccatgtttttaaacgagcgattttg 39723479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 239
Target Start/End: Original strand, 15042143 - 15042222
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||||||||||||||||| ||||| ||||||||| |||||||| |||||||||||  ||  ||||||| ||| |||||||    
T  15042143 taggtttaattgcactttccccccttatcttttgccaattgtgtgattttgcaccctattgttttaaatgagcgattttg 15042222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 165 - 224
Target Start/End: Original strand, 37752087 - 37752146
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgttttt 224  Q
    ||||||||||||||||||||||| |||||  ||||||||||||||||||| ||| |||||    
T  37752087 ttaattgcacttttcccccctatgttttgctaattgtgcgattttgcaccccatcttttt 37752146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 160 - 214
Target Start/End: Original strand, 16928940 - 16928994
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    |||| ||||||||||||| |||||||||||||||  |||||||||||||||||||    
T  16928940 taggcttaattgcactttccccccctatcttttgctaattgtgcgattttgcacc 16928994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 24473819 - 24473745
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||||||||||||||  ||||||  |||| |||||||||||||||||||| |||  ||||||||||| |||||||    
T  24473819 ttaattgcacttttcatccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttg 24473745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 165 - 231
Target Start/End: Complemental strand, 37397196 - 37397130
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgag 231  Q
    |||||||||||||||||||||||  |||| ||||||||||||||||| || |||  |||||||||||    
T  37397196 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgccccccatagttttaaacgag 37397130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 16929293 - 16929244
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    ||||||||||||||| |||||||||||||  |||||||||||||||||||    
T  16929293 ttaattgcacttttctcccctatcttttgctaattgtgcgattttgcacc 16929244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 25438795 - 25438844
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    |||||||||||||||||||||||  |||| ||||||||||||||||||||    
T  25438795 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacc 25438844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 43245874 - 43245923
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    |||||||||||||| ||||||||||||||  |||||||||||||||||||    
T  43245874 ttaattgcactttttccccctatcttttgataattgtgcgattttgcacc 43245923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 43246227 - 43246178
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    |||||||||||||||||||||||||||||  ||||||| |||||||||||    
T  43246227 ttaattgcacttttcccccctatcttttgctaattgtgtgattttgcacc 43246178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 160 - 228
Target Start/End: Complemental strand, 34498611 - 34498543
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaac 228  Q
    |||| |||||||||||||||||||||||  ||||  ||||||||||||||||||| |||  ||||||||    
T  34498611 taggcttaattgcacttttcccccctatagtttgcaaattgtgcgattttgcaccccatagttttaaac 34498543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 43162588 - 43162541
Alignment:
Q  166 taattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||    
T  43162588 taattgcacttttccccc-tatcttttgtcaatcgtgcgattttgcacc 43162541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 213
Target Start/End: Complemental strand, 74915 - 74864
Alignment:
Q  163 gtttaattgcacttttcccccctatctttt-gtcaattgtgcgattttgcac 213  Q
    ||||||||||||||||  |||||||||||| |||||||||||||||||||||    
T  74915 gtttaattgcacttttgtcccctatctttttgtcaattgtgcgattttgcac 74864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 160 - 239
Target Start/End: Complemental strand, 6199152 - 6199073
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||| |||||||||||||||  ||||||  |||| |||||||||||||||||| | |||  ||||||||||| |||||||    
T  6199152 taggcttaattgcacttttcttccctatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttg 6199073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 165 - 216
Target Start/End: Original strand, 43162237 - 43162287
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctc 216  Q
    ||||||||||||||||||| ||| |||||| |||||||||||||||||||||    
T  43162237 ttaattgcacttttccccc-tatattttgttaattgtgcgattttgcacctc 43162287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 226
Target Start/End: Original strand, 6092793 - 6092839
Alignment:
Q  180 ccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaa 226  Q
    ||||||||||||||||||||||||||||||||| | ||| |||||||    
T  6092793 ccccctatcttttgtcaattgtgcgattttgcatcccatatttttaa 6092839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 20861689 - 20861615
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||| |||| ||||||||  | || |||||||||||||||||||| |||  ||||||||||| |||||||    
T  20861689 ttaattgcattttttccccctatagtctgccaattgtgcgattttgcaccccatagttttaaacgagcgattttg 20861615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 214
Target Start/End: Original strand, 22786838 - 22786892
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    ||||||||||||||||||| |||||||||||||   ||||||| |||||||||||    
T  22786838 taggtttaattgcactttttccccctatcttttactaattgtgtgattttgcacc 22786892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 24473346 - 24473420
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||||||||||||| ||||||||  |||| |||||||| ||||||||||| |||  ||||||| ||| |||||||    
T  24473346 ttaattgcactttttccccctatagtttgccaattgtgtgattttgcaccccataattttaaatgagcgattttg 24473420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 34313768 - 34313815
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    ||||||||||||||||||  |||||||||| |||||||||||||||||||    
T  34313768 ttaattgcacttttcccc--tatcttttgttaattgtgcgattttgcacc 34313815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 3463996 - 3463947
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    ||||||||||||||||||||||| |||||  ||||||||||| |||||||    
T  3463996 ttaattgcacttttcccccctatattttgctaattgtgcgatcttgcacc 3463947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 41662110 - 41662159
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    |||||||||| ||| |||| |||||||||| |||||||||||||||||||    
T  41662110 ttaattgcacattttccccatatcttttgttaattgtgcgattttgcacc 41662159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 214
Target Start/End: Original strand, 22786934 - 22786986
Alignment:
Q  163 gtttaattgcacttttcccccctatct-tttgtcaattgtgcgattttgcacc 214  Q
    |||||||||||||||| |||| ||||| ||||||| |||||||||||||||||    
T  22786934 gtttaattgcacttttgccccttatctatttgtcagttgtgcgattttgcacc 22786986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 211
Target Start/End: Original strand, 37669956 - 37670004
Alignment:
Q  163 gtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgc 211  Q
    |||||||||||||||||| || |||||||||| |||||||| |||||||    
T  37669956 gtttaattgcacttttcctccttatcttttgttaattgtgcaattttgc 37670004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 165 - 216
Target Start/End: Complemental strand, 22852007 - 22851956
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctc 216  Q
    ||||||| | |||||  |||||||||||| ||||||||||||||||||||||    
T  22852007 ttaattgtatttttcatccctatcttttgccaattgtgcgattttgcacctc 22851956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 231
Target Start/End: Original strand, 9623505 - 9623571
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgag 231  Q
    |||||||||||||| | | ||||  |||| |||||||||||||||||||| |||  |||||||||||    
T  9623505 ttaattgcactttttctcactatagtttgccaattgtgcgattttgcaccccatagttttaaacgag 9623571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 16169658 - 16169584
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||||||||||||||| ||||||  ||| |||||||||| | |||||| || ||  ||||||||||| |||||||    
T  16169658 ttaattgcacttttcctccctatagtttttcaattgtgcaaatttgcatcttatagttttaaacgagcgattttg 16169584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 18020137 - 18020090
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    |||||||||||||| |||  |||||||||| |||||||||||||||||||    
T  18020137 ttaattgcacttttaccc--tatcttttgttaattgtgcgattttgcacc 18020090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 239
Target Start/End: Complemental strand, 33727160 - 33727082
Alignment:
Q  161 aggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||||||||| |||||||| ||  |||  ||||  |||||||||||||||||| ||||  ||||||||||| |||||||    
T  33727160 aggtttaattacacttttctcctttatagtttgctaattgtgcgattttgcacttcatagttttaaacgagcgattttg 33727082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 74689 - 74737
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    ||||||||||||||||| || ||||||||  |||||||||||||||||||    
T  74689 ttaattgcacttttccctcc-atcttttgctaattgtgcgattttgcacc 74737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 212
Target Start/End: Original strand, 9930662 - 9930710
Alignment:
Q  163 gtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgca 212  Q
    ||||||||||| ||||||||  ||| ||||||||||||||||||||||||    
T  9930662 gtttaattgcatttttcccctatat-ttttgtcaattgtgcgattttgca 9930710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 9930879 - 9930842
Alignment:
Q  176 tttcccccctatcttttgtcaattgtgcgattttgcac 213  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  9930879 tttcccccttatcttttgttaattgtgcgattttgcac 9930842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 215
Target Start/End: Original strand, 11007655 - 11007708
Alignment:
Q  163 gtttaattgcacttttcccccctatc-ttttgtcaattgtgcgattttgcacct 215  Q
    |||||||||||||||| | ||||||| ||||| ||||||||||||||| |||||    
T  11007655 gtttaattgcacttttgctccctatctttttgccaattgtgcgattttacacct 11007708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 209
Target Start/End: Original strand, 9465610 - 9465653
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgatttt 209  Q
    |||||||||||||||| || ||||||||||||||||||| |||||    
T  9465610 ttaattgcacttttcctcc-tatcttttgtcaattgtgcaatttt 9465653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 214
Target Start/End: Complemental strand, 9465908 - 9465876
Alignment:
Q  182 ccctatcttttgtcaattgtgcgattttgcacc 214  Q
    ||||||||||||| |||||||||||||||||||    
T  9465908 ccctatcttttgttaattgtgcgattttgcacc 9465876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 214
Target Start/End: Original strand, 18019915 - 18019963
Alignment:
Q  167 aattgcacttttcccccctatcttttgtc-aattgtgcgattttgcacc 214  Q
    |||||||||||| |||||||||||||  | |||||||||||||||||||    
T  18019915 aattgcacttttgccccctatctttttcctaattgtgcgattttgcacc 18019963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 2e-27; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 153 - 239
Target Start/End: Complemental strand, 33829699 - 33829613
Alignment:
Q  153 aaaaagataggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||| ||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||| |||||||    
T  33829699 aaaaatataggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttg 33829613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 33828993 - 33829067
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||| |||||||    
T  33828993 ttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttg 33829067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 7654599 - 7654525
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||| |||  |||||||||||||| ||||    
T  7654599 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagtgactttg 7654525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 148 - 214
Target Start/End: Complemental strand, 3404059 - 3403991
Alignment:
Q  148 ctaataaaaaga--taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    ||||||||||||  |||| |||||||||||||||||||||||||||||  |||||||||||||||||||    
T  3404059 ctaataaaaagaaataggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacc 3403991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 18241857 - 18241906
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  18241857 ttaattgcacttttcccccctatcttttgttaattgtgcgattttgcacc 18241906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 21032336 - 21032280
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctc 216  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  21032336 taggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgcgcctc 21032280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 3403720 - 3403778
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttt 223  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||| ||| ||||    
T  3403720 ttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccatctttt 3403778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 10087909 - 10087835
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||||||||||| |  |||| |||||||||||||||||||| |||  ||||||||||| |||||||    
T  10087909 ttaattgcacttttcccccctttagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttg 10087835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 33974350 - 33974276
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||| |||||||||||||  |||| |||||||||||||||||||| |||  ||||||||||| |||||||    
T  33974350 ttaattgcatttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttg 33974276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 162 - 239
Target Start/End: Complemental strand, 32734050 - 32733973
Alignment:
Q  162 ggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||||||||| ||||||  |||| |||||||||||||||||| | |||  ||||||||||| |||||||    
T  32734050 ggtttaattgcacttttcctccctatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttg 32733973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 161 - 212
Target Start/End: Complemental strand, 31598782 - 31598732
Alignment:
Q  161 aggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgca 212  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  31598782 aggtttaattgcacttttccccc-tatcttttgttaattgtgcgattttgca 31598732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 162 - 212
Target Start/End: Original strand, 12714431 - 12714481
Alignment:
Q  162 ggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgca 212  Q
    |||| |||||||||||| ||||||||||||||| |||||||||||||||||    
T  12714431 ggttgaattgcacttttgccccctatcttttgttaattgtgcgattttgca 12714481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 22755140 - 22755066
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||||||||  |||  |||||||||| |||||||||||||| |||  ||||||||||| |||||||    
T  22755140 ttaattgcacttttcccctttatagtttgtcaattatgcgattttgcaccacatagttttaaacgagcgattttg 22755066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 30388418 - 30388364
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    |||||||||||| |||||| ||||||||||||||  |||||||||||||||||||    
T  30388418 taggtttaattgtactttttccccctatcttttgctaattgtgcgattttgcacc 30388364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 163 - 214
Target Start/End: Original strand, 21032101 - 21032153
Alignment:
Q  163 gtttaattgcacttttcccccctatctt-ttgtcaattgtgcgattttgcacc 214  Q
    ||||| |||||||||| ||||||||||| ||||||||||||||||||||||||    
T  21032101 gtttagttgcacttttgccccctatcttcttgtcaattgtgcgattttgcacc 21032153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 214
Target Start/End: Original strand, 10039674 - 10039727
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    |||| |||||||||||||||||| ||||||||||  |||||||||||||||||||    
T  10039674 taggcttaattgcacttttcccc-ctatcttttgctaattgtgcgattttgcacc 10039727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 11656833 - 11656784
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    ||||||||||||||| | |||||||||||  |||||||||||||||||||    
T  11656833 ttaattgcacttttctctcctatcttttgctaattgtgcgattttgcacc 11656784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 209
Target Start/End: Complemental strand, 31598201 - 31598157
Alignment:
Q  166 taattgcacttttcccccctatc-ttttgtcaattgtgcgatttt 209  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||    
T  31598201 taattgcacttttgccccctatctttttgtcaattgtgcgatttt 31598157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 209
Target Start/End: Complemental strand, 31598685 - 31598641
Alignment:
Q  166 taattgcacttttcccccctatc-ttttgtcaattgtgcgatttt 209  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||    
T  31598685 taattgcacttttgccccctatctttttgtcaattgtgcgatttt 31598641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 165 - 212
Target Start/End: Original strand, 30388065 - 30388111
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgca 212  Q
    ||||||||||||| |||||||||||||||  |||||||||||||||||    
T  30388065 ttaattgcacttt-cccccctatcttttgctaattgtgcgattttgca 30388111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 231
Target Start/End: Complemental strand, 2354861 - 2354795
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgag 231  Q
    ||||||||| |||||||  ||||  ||||||||||||||||||||||||| |||  ||| |||||||    
T  2354861 ttaattgcatttttcccgtctatagtttgtcaattgtgcgattttgcaccccattgtttaaaacgag 2354795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 239
Target Start/End: Complemental strand, 13177102 - 13177033
Alignment:
Q  169 ttgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||||| |||  | ||||||||||| |||||| ||||||||  ||||||||||| |||||||    
T  13177102 ttgcacttttccccc-tatagtatgtcaattgtgagattttacacctcatagttttaaacgagcgattttg 13177033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 238
Target Start/End: Complemental strand, 29074412 - 29074350
Alignment:
Q  176 tttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgatttt 238  Q
    ||||||||||||  |||| |||||||||||||||||||| |||  ||| ||||||| ||||||    
T  29074412 tttcccccctatagtttgccaattgtgcgattttgcaccccatagtttaaaacgagcgatttt 29074350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 238
Target Start/End: Complemental strand, 29079176 - 29079114
Alignment:
Q  176 tttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgatttt 238  Q
    ||||||||||||  |||| |||||||||||||||||||| |||  ||| ||||||| ||||||    
T  29079176 tttcccccctatagtttgccaattgtgcgattttgcaccccatagtttaaaacgagcgatttt 29079114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 238
Target Start/End: Complemental strand, 29106985 - 29106923
Alignment:
Q  176 tttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgatttt 238  Q
    ||||||||||||  |||| |||||||||||||||||||| |||  ||| ||||||| ||||||    
T  29106985 tttcccccctatagtttgccaattgtgcgattttgcaccccatagtttaaaacgagcgatttt 29106923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 3825530 - 3825578
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    ||||||||||||||||||| ||| |||||  |||||||||||||||||||    
T  3825530 ttaattgcacttttccccc-tatattttgctaattgtgcgattttgcacc 3825578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 18242207 - 18242158
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    ||||||||| ||||   |||||||||||| ||||||||||||||||||||    
T  18242207 ttaattgcattttttttccctatcttttgccaattgtgcgattttgcacc 18242158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 21031982 - 21032030
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    ||||||||||||||||||| || ||||||  |||||||||||||||||||    
T  21031982 ttaattgcacttttccccc-taacttttgctaattgtgcgattttgcacc 21032030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 23250595 - 23250643
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    |||||||||||||| |||| |||||||||||||||||| ||| |||||||    
T  23250595 ttaattgcactttttcccc-tatcttttgtcaattgtgagatcttgcacc 23250643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 214
Target Start/End: Original strand, 2762611 - 2762659
Alignment:
Q  167 aattgcacttttcccccctatc-ttttgtcaattgtgcgattttgcacc 214  Q
    |||||||||||| ||||||||| |||||  |||||||||||||||||||    
T  2762611 aattgcacttttgccccctatctttttgctaattgtgcgattttgcacc 2762659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 214
Target Start/End: Complemental strand, 10039893 - 10039845
Alignment:
Q  167 aattgcacttttcccccctatc-ttttgtcaattgtgcgattttgcacc 214  Q
    |||||||||||| ||||||||| |||||  |||||||||||||||||||    
T  10039893 aattgcacttttgccccctatctttttgctaattgtgcgattttgcacc 10039845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 214
Target Start/End: Original strand, 11656608 - 11656656
Alignment:
Q  167 aattgcacttttcccccctatc-ttttgtcaattgtgcgattttgcacc 214  Q
    |||||||||||| ||||||||| |||||  |||||||||||||||||||    
T  11656608 aattgcacttttgccccctatcgttttgataattgtgcgattttgcacc 11656656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 214
Target Start/End: Complemental strand, 18242082 - 18242034
Alignment:
Q  167 aattgcacttttcccccctatctttt-gtcaattgtgcgattttgcacc 214  Q
    |||||||||||| |||| |||||||| || |||||||||||||||||||    
T  18242082 aattgcacttttgccccttatctttttgttaattgtgcgattttgcacc 18242034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 163 - 218
Target Start/End: Complemental strand, 23250823 - 23250768
Alignment:
Q  163 gtttaattgcacttttcccccctatcttttg-tcaattgtgcgattttgcacctcat 218  Q
    |||||||||||||||| |||| ||| ||||| | |||||||||||||||||||||||    
T  23250823 gtttaattgcacttttacccc-tatattttggttaattgtgcgattttgcacctcat 23250768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 2e-27; HSPs: 71)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 39692051 - 39691977
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  39692051 ttaattgcacttttcccccctatattttgtcaattgtgcgattttgcaccccatgtttttaaacgtgtgattttg 39691977  T

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Target: chr1; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 6002240 - 6002314
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||    
T  6002240 ttaattgcacttttcacccctatcttttgtcaattgtgtgattttgcaccccatgtttttaaacgagcgattttg 6002314  T

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Target: chr1; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 49284412 - 49284486
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||| |||||||    
T  49284412 ttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttg 49284486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 28634214 - 28634134
Alignment:
Q  159 ataggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||||||| |||  ||||||||||  |||||||    
T  28634214 ataggtttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgatcgattttg 28634134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 6002945 - 6002871
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||||||||||||||  |||||||||||  |||||||||||||||||||| |||||||||||||||| |||||||    
T  6002945 ttaattgcacttttcatccctatcttttcgcaattgtgcgattttgcaccccatgtttttaaacgagcgattttg 6002871  T

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Target: chr1; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 161 - 239
Target Start/End: Original strand, 42611184 - 42611262
Alignment:
Q  161 aggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||||||||||||| |||  |||| ||||||||||||||||||||||||  ||||||||||| |||||||    
T  42611184 aggtttaattgcacttttcccccttatagtttgccaattgtgcgattttgcacctcatagttttaaacgagcgattttg 42611262  T

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Target: chr1; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 161 - 239
Target Start/End: Original strand, 48104677 - 48104755
Alignment:
Q  161 aggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||||||||||||||||||||||||||  |||| |||||||||||||||||||| |||  ||||||||||| |||||||    
T  48104677 aggtttaattgcacttttcccccctatagtttggcaattgtgcgattttgcaccccatagttttaaacgagcgattttg 48104755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 162 - 239
Target Start/End: Complemental strand, 42611668 - 42611591
Alignment:
Q  162 ggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||||||||||||||||| |||||||  |||||||||||||||||||||||||||||  |||||||| || |||||||    
T  42611668 ggtttaattgcacttttctcccctatagtttgtcaattgtgcgattttgcacctcatagttttaaacaagcgattttg 42611591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 162 - 239
Target Start/End: Complemental strand, 50430135 - 50430058
Alignment:
Q  162 ggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||||||||||||||||  |||| |||||||||||||||||||| |||  ||||||||||| |||||||    
T  50430135 ggtttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttg 50430058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 159 - 214
Target Start/End: Original strand, 8108718 - 8108773
Alignment:
Q  159 ataggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  8108718 ataggtttaattgcacttttcctccctatcttttgttaattgtgcgattttgcacc 8108773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 165 - 224
Target Start/End: Complemental strand, 8109044 - 8108985
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgttttt 224  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| ||| |||||    
T  8109044 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccatcttttt 8108985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 22149754 - 22149699
Alignment:
Q  161 aggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctc 216  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  22149754 aggtttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacctc 22149699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 160 - 239
Target Start/End: Complemental strand, 26815175 - 26815096
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||| |||||||||||||||||||||||  ||| ||||||||||||||||||||| |||  ||||||||||| |||||||    
T  26815175 taggcttaattgcacttttcccccctatagtttatcaattgtgcgattttgcaccccatagttttaaacgagcgattttg 26815096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 160 - 239
Target Start/End: Complemental strand, 32163099 - 32163020
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||| |||||||||||||||||||||||  |||| |||||||||||||||||||| |||  ||||||||||| |||||||    
T  32163099 taggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttg 32163020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 9347129 - 9347203
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||||||||||||||||||||||  |||| |||||||||||||||||||| |||  ||||||||||| |||||||    
T  9347129 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttg 9347203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 26814697 - 26814771
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||||||||||||||| ||||||  ||||||||||||||||||||||||| |||  ||||||||||| |||||||    
T  26814697 ttaattgcacttttcctccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttg 26814771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 162 - 239
Target Start/End: Original strand, 46823843 - 46823920
Alignment:
Q  162 ggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||||||||||||||||  |||| |||||||||||||||||||  |||  ||||||||||| |||||||    
T  46823843 ggtttaattgcacttttcccccctatagtttgccaattgtgcgattttgcactccatagttttaaacgagcgattttg 46823920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 47955309 - 47955358
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  47955309 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 47955358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 147 - 223
Target Start/End: Complemental strand, 48191424 - 48191348
Alignment:
Q  147 tctaataaaaagataggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttt 223  Q
    ||||| ||||| ||||| ||||||||||||||| ||||||||||||| |||| ||||||||||||||| ||| ||||    
T  48191424 tctaaaaaaaaaataggcttaattgcacttttcacccctatcttttgccaatggtgcgattttgcaccccatctttt 48191348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 163 - 214
Target Start/End: Original strand, 1176837 - 1176888
Alignment:
Q  163 gtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  1176837 gtttaattgcacttttaccccctatcttttgtcaattgtgcaattttgcacc 1176888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 160 - 239
Target Start/End: Original strand, 44911023 - 44911102
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||| ||||||||||||| ||||||||| ||||| |||||||||||||||||||| |||  ||| ||||||| |||||||    
T  44911023 taggcttaattgcactttccccccctatattttgccaattgtgcgattttgcaccccattgtttaaaacgagcgattttg 44911102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 165 - 224
Target Start/End: Original strand, 48190774 - 48190833
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgttttt 224  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||| ||| |||||    
T  48190774 ttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatcttttt 48190833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 161 - 239
Target Start/End: Original strand, 999111 - 999188
Alignment:
Q  161 aggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||||||||||||| |||  ||||||||||||||||||||||| | |||  ||||||||||| |||||||    
T  999111 aggtttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcatcccatagttttaaacgagcgattttg 999188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 13918918 - 13918844
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||||||||||||||| ||||||  |||| ||||||||||||||||||||||||  ||||||||||  |||||||    
T  13918918 ttaattgcacttttcctccctatagtttgccaattgtgcgattttgcacctcatagttttaaacgaacgattttg 13918844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 20480171 - 20480244
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||||||||| |||  ||||||||||||||||||||||||| |||  ||||||||||| |||||||    
T  20480171 ttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttg 20480244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 21687028 - 21687102
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||||||||||||||||||||||  |||||||||||||  |||||||||| |||  ||||||||||| |||||||    
T  21687028 ttaattgcacttttcccccctatagtttgtcaattgtgtaattttgcaccccatagttttaaacgagcgattttg 21687102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 47955664 - 47955610
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    |||| |||||||||||||||||||||||||||| | |||||||||||||||||||    
T  47955664 taggcttaattgcacttttcccccctatcttttattaattgtgcgattttgcacc 47955610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 48105167 - 48105093
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||||||||| |||  |||| |||||||||||||||||||| |||  ||||||||||| |||||||    
T  48105167 ttaattgcacttttcccccttatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttg 48105093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 50526523 - 50526449
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||||||||||||| ||||||||  |||| |||||||||||||||||||| |||  ||||||||||| |||||||    
T  50526523 ttaattgcactttttccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttg 50526449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 166 - 239
Target Start/End: Complemental strand, 50949615 - 50949542
Alignment:
Q  166 taattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||||||||||| |||||||||  ||||||||||||||||||||||| |||||  ||| ||||||| |||||||    
T  50949615 taattgcactttccccccctatagtttgtcaattgtgcgattttgcatctcattgtttaaaacgagcgattttg 50949542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 28633717 - 28633797
Alignment:
Q  159 ataggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||| ||||||||||||||||||| |||  |||| ||||||| |||||||||||| |||  ||||||||||| |||||||    
T  28633717 ataggcttaattgcacttttcccccttatagtttgccaattgtacgattttgcaccccatagttttaaacgagcgattttg 28633797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 239
Target Start/End: Original strand, 6703458 - 6703537
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||| |||||||||||||| || |||||  |||  ||||||||||||||||||||||||  ||||||||||| |||||||    
T  6703458 taggcttaattgcactttttcctcctatagtttaccaattgtgcgattttgcacctcatagttttaaacgagcgattttg 6703537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 214
Target Start/End: Complemental strand, 31848249 - 31848194
Alignment:
Q  159 ataggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    ||||| ||||||||||||||| |||||||||||||| |||||| ||||||||||||    
T  31848249 ataggcttaattgcacttttctcccctatcttttgttaattgtacgattttgcacc 31848194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 6703945 - 6703871
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||||| |||||||  |||| ||||||||| |||||||||| |||  ||||||||||| |||||||    
T  6703945 ttaattgcacttttctcccctatagtttgccaattgtgcaattttgcaccccatagttttaaacgagcgattttg 6703871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 153 - 239
Target Start/End: Complemental strand, 9347613 - 9347528
Alignment:
Q  153 aaaaagataggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||| ||||| ||||||||||||| |||||||||  |||| ||||||||| |||||||||| |||  ||||||||||| |||||||    
T  9347613 aaaaatataggcttaattgcacttt-cccccctatagtttgccaattgtgcaattttgcaccccatagttttaaacgagcgattttg 9347528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 13918449 - 13918523
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||||||||||||| || |||||  |||| |||||||||||||||||||| |||  ||||||||||| |||||||    
T  13918449 ttaattgcactttttcctcctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttg 13918523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 27172119 - 27172192
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||||||||| |||  |||| |||||||||||||||||||| |||  ||||||||||| |||||||    
T  27172119 ttaattgcacttttccccc-tatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttg 27172192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 27172592 - 27172518
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||||||||||| |  |||| |||||||||||||||||| | |||  ||||||||||| |||||||    
T  27172592 ttaattgcacttttcccccctgtactttgccaattgtgcgattttgcatcccattgttttaaacgagcgattttg 27172518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 49285086 - 49285032
Alignment:
Q  185 tatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| || |||||||    
T  49285086 tatcttttgccaattgtgcgattttgcaccccatgtttttaaacaagcgattttg 49285032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 165 - 211
Target Start/End: Original strand, 50615243 - 50615289
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgc 211  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||    
T  50615243 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgc 50615289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 50615671 - 50615598
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||||||||| |||  ||||||||||||||||||||||||| |||  ||||||| ||| |||||||    
T  50615671 ttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaatgagcgattttg 50615598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 165 - 211
Target Start/End: Original strand, 50623071 - 50623117
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgc 211  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||    
T  50623071 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgc 50623117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 50623499 - 50623426
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||||||||| |||  ||||||||||||||||||||||||| |||  ||||||| ||| |||||||    
T  50623499 ttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaatgagcgattttg 50623426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 238
Target Start/End: Complemental strand, 4692484 - 4692411
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgatttt 238  Q
    |||||||||||||| ||||||||  |||| ||||||||| |||||||||| |||  ||||||||||| ||||||    
T  4692484 ttaattgcactttttccccctatagtttgccaattgtgcaattttgcaccccatagttttaaacgagcgatttt 4692411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 17518652 - 17518604
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  17518652 ttaattgcacttttccccc-tatcttttgccaattgtgcgattttgcacc 17518604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 162 - 238
Target Start/End: Original strand, 50949161 - 50949237
Alignment:
Q  162 ggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgatttt 238  Q
    |||||||||| ||||||||| |||||  | || ||||||||||||||||||||||||  ||| ||||||| ||||||    
T  50949161 ggtttaattgtacttttccctcctatagtctgccaattgtgcgattttgcacctcattgtttaaaacgagcgatttt 50949237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 20371043 - 20371115
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||||||||||||  ||||||||  |||||||||||||| |||||||||| |||  ||||||||||| |||||||    
T  20371043 ttaattgcacttt--ccccctatagtttgtcaattgtgcaattttgcaccccatagttttaaacgagcgattttg 20371115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 165 - 212
Target Start/End: Original strand, 41082912 - 41082959
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgca 212  Q
    ||||||| |||||| |||||||||||||| ||||||||||||||||||    
T  41082912 ttaattgtactttttccccctatcttttgccaattgtgcgattttgca 41082959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 214
Target Start/End: Complemental strand, 41083267 - 41083213
Alignment:
Q  159 ataggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    ||||| ||||||||||||||||||| |||||||||| | |||||||||||||||||    
T  41083267 ataggcttaattgcacttttccccc-tatcttttgttagttgtgcgattttgcacc 41083213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 160 - 239
Target Start/End: Complemental strand, 44911493 - 44911414
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||||||||||||| |||| ||||||||  |||| ||||||||||||||||||||  ||  ||| ||||||| |||||||    
T  44911493 taggtttaattgcattttttccccctatagtttgccaattgtgcgattttgcaccctattgtttaaaacgagcgattttg 44911414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 1177074 - 1177020
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    ||||||||||||||||||||| |||||||||| |  |||||||| ||||||||||    
T  1177074 taggtttaattgcacttttcctccctatctttcgctaattgtgcaattttgcacc 1177020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 19008806 - 19008752
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    |||| |||||||||||||||||||||||  |||  ||||||||||||||||||||    
T  19008806 taggcttaattgcacttttcccccctatagtttcgcaattgtgcgattttgcacc 19008752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 46824329 - 46824255
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||||||||||||| || |||||  |||| ||||||||| |||||||||| |||  ||||||||||| |||||||    
T  46824329 ttaattgcactttttcctcctatagtttgccaattgtgcaattttgcaccccatagttttaaacgagcgattttg 46824255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 50429659 - 50429733
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||| ||||||||||  |||  ||||  |||||||||||||||||||||||  ||||||||||| |||||||    
T  50429659 ttaattgtacttttcccctttataatttgctaattgtgcgattttgcacctcatagttttaaacgagcgattttg 50429733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 13589709 - 13589661
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    ||||||||||||||||||| |||||||||  |||||||||||||||||||    
T  13589709 ttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcacc 13589661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 238
Target Start/End: Complemental strand, 21687517 - 21687445
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgatttt 238  Q
    ||||| ||||||||||||| |||  |||| |||||||||||||||| |||||||  ||||||||||| ||||||    
T  21687517 ttaatagcacttttccccc-tataatttgccaattgtgcgattttgtacctcatagttttaaacgagcgatttt 21687445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 222
Target Start/End: Original strand, 33085674 - 33085731
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgttt 222  Q
    ||||||| |||||||| |||||| |||||||||||||  ||||||||||| |||||||    
T  33085674 ttaattgtacttttccaccctatattttgtcaattgtttgattttgcaccccatgttt 33085731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 999581 - 999502
Alignment:
Q  159 ataggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||| ||||||||||||||||||| |||   ||| |||||||||||||||||| | |||  ||||||||||| |||||||    
T  999581 ataggcttaattgcacttttccccc-tatagattgccaattgtgcgattttgcaacccatagttttaaacgagcgattttg 999502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 237
Target Start/End: Complemental strand, 20480662 - 20480591
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattt 237  Q
    ||||||||||||||||||| |||  |||| ||||||||||||||||||||  ||  ||||||||||| |||||    
T  20480662 ttaattgcacttttccccc-tatagtttgccaattgtgcgattttgcaccctatagttttaaacgagcgattt 20480591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 161 - 212
Target Start/End: Original strand, 31847894 - 31847945
Alignment:
Q  161 aggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgca 212  Q
    ||||||||||||||||| ||||| |||||||||  |||||||| ||||||||    
T  31847894 aggtttaattgcactttacccccttatcttttgctaattgtgcaattttgca 31847945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 214
Target Start/End: Original strand, 17518301 - 17518354
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    |||| |||||||||| |||||||  |||||||||| |||||||||||||||||||    
T  17518301 taggcttaattgcacctttcccct-tatcttttgttaattgtgcgattttgcacc 17518354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 211
Target Start/End: Original strand, 19007722 - 19007783
Alignment:
Q  149 taataaaaagataggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgc 211  Q
    ||||||||| | ||| ||||||||||||| |||||||||  |||| |||||||||||||||||    
T  19007722 taataaaaaaaaaggcttaattgcacttt-cccccctatagtttgccaattgtgcgattttgc 19007783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 212
Target Start/End: Original strand, 31848017 - 31848067
Alignment:
Q  163 gtttaattgcacttttcccccctatc-ttttgtcaattgtgcgattttgca 212  Q
    |||||||||||||||| ||| ||||| ||||| ||||||||||||||||||    
T  31848017 gtttaattgcacttttgccctctatctttttgccaattgtgcgattttgca 31848067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 214
Target Start/End: Original strand, 39690792 - 39690846
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    |||| ||| |||||||||| |||||||| ||| | ||||||||||||||||||||    
T  39690792 taggcttagttgcactttttccccctatatttggccaattgtgcgattttgcacc 39690846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 219
Target Start/End: Complemental strand, 47498545 - 47498492
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatg 219  Q
    ||||||||||||||||||| |||  ||||||||||||||| ||||||||| ||||    
T  47498545 ttaattgcacttttccccc-tatagtttgtcaattgtgcggttttgcaccccatg 47498492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 49318216 - 49318143
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||| |||||||||  |||| |||||||||||||||||| | |||  ||| ||||||| |||||||    
T  49318216 ttaattgcacttt-cccccctatagtttgccaattgtgcgattttgcatcccatagtttaaaacgagcgattttg 49318143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 20371403 - 20371355
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    ||||||||||||||||||| |||  |||| ||||||||||||||||||||    
T  20371403 ttaattgcacttttccccc-tatagtttgccaattgtgcgattttgcacc 20371355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 22149406 - 22149453
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    |||||||||||||| |||||||||||| || |||||||||||||||||||    
T  22149406 ttaattgcactttt-ccccctatctttggt-aattgtgcgattttgcacc 22149453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 215
Target Start/End: Complemental strand, 22149632 - 22149579
Alignment:
Q  163 gtttaattgcacttttcccccctatc-ttttgtcaattgtgcgattttgcacct 215  Q
    |||||||||||||||| |||| |||| |||||  ||||||||||||||||||||    
T  22149632 gtttaattgcacttttgccccttatctttttgctaattgtgcgattttgcacct 22149579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 238
Target Start/End: Original strand, 49317755 - 49317827
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgatttt 238  Q
    ||||||||||||||||||| |||  |||| ||||||||| |||||||| | |||  ||||||||||| ||||||    
T  49317755 ttaattgcacttttccccc-tatagtttgccaattgtgcaattttgcatcccatagttttaaacgagcgatttt 49317827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 238
Target Start/End: Complemental strand, 49318493 - 49318421
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgatttt 238  Q
    ||||||||| ||||||||| |||  ||| ||||||||||||||||||| | |||  ||||||||||| ||||||    
T  49318493 ttaattgcatttttccccc-tatagtttatcaattgtgcgattttgcatcccatagttttaaacgagcgatttt 49318421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 9e-27; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 162 - 239
Target Start/End: Complemental strand, 36096529 - 36096452
Alignment:
Q  162 ggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||| |||||||    
T  36096529 ggtttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttg 36096452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 50678776 - 50678856
Alignment:
Q  159 ataggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||| |||||||    
T  50678776 ataggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttg 50678856  T

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Target: chr4; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 161 - 239
Target Start/End: Original strand, 43050606 - 43050684
Alignment:
Q  161 aggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||||||||||||||||||  |||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||    
T  43050606 aggtttaattgcacttttcatccctatcttttaccaattgtgcgattttgcaccccatgtttttaaacgagtgattttg 43050684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 36095820 - 36095894
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||| ||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||| |||||||    
T  36095820 ttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttg 36095894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 50679475 - 50679401
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||||| ||||||||||||| ||||||| |||||||||||| |||||||||||||||| |||||||    
T  50679475 ttaattgcacttttcacccctatcttttgccaattgtacgattttgcaccccatgtttttaaacgagcgattttg 50679401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 160 - 239
Target Start/End: Complemental strand, 39744521 - 39744442
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||| |||||||||||||||||||||||  ||||||||||||||||||||||||| |||  ||||||||||| |||||||    
T  39744521 taggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttg 39744442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 160 - 239
Target Start/End: Complemental strand, 45830252 - 45830173
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||| ||||| ||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||| ||| |||||||    
T  45830252 taggcttaatcgcacttttcacccctatcttttgtcaattgtgcgattttacaccccatgtttttaaaagagcgattttg 45830173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 159 - 226
Target Start/End: Original strand, 56505690 - 56505757
Alignment:
Q  159 ataggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaa 226  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||    
T  56505690 ataggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccatatttttaa 56505757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 43051303 - 43051229
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||| ||||| ||||||||||||| |||||||| ||||||||||| |||||||||||||||| |||||||    
T  43051303 ttaattgcatttttcacccctatcttttgccaattgtgtgattttgcaccccatgtttttaaacgagcgattttg 43051229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 160 - 239
Target Start/End: Original strand, 9023242 - 9023321
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||| ||||||||||||||| |||||||  |||| |||||||||||||||||||| |||  |||||||||||||||||||    
T  9023242 taggcttaattgcacttttctcccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagtgattttg 9023321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 160 - 239
Target Start/End: Original strand, 28196344 - 28196423
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||| |||||||||||||||||||||||  |||| |||||||||||||||||||| |||  ||||||||||| |||||||    
T  28196344 taggcttaattgcacttttcccccctataatttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttg 28196423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 169490 - 169416
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||| |||||||||||||  ||||||||||||||||||||||||| |||  ||||||||||| |||||||    
T  169490 ttaattgcatttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttg 169416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 293268 - 293194
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||||||||||||| ||||||||  ||||||||||||||||||||||||| |||  ||||||||||| |||||||    
T  293268 ttaattgcactttttccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttg 293194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 9023731 - 9023657
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||| |||  ||||||| ||| |||||||    
T  9023731 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaatgagcgattttg 9023657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 24775834 - 24775776
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttt 223  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| ||| ||||    
T  24775834 ttaattgcacttttccctcctatcttttgtcaattgtgcgattttgcaccccatctttt 24775776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 25161881 - 25161955
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||||||||||||||||||||||  |||| |||||||||||||||||||| |||  ||||||||||| |||||||    
T  25161881 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttg 25161955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 28196824 - 28196750
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||||||||||||||||||||||  |||| |||||||||||||||||||| |||  ||||||||||| |||||||    
T  28196824 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttg 28196750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 32703701 - 32703627
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||||||||||||||||||||||  |||| |||||||||||||||||||| |||  ||||||||||| |||||||    
T  32703701 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttg 32703627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 160 - 238
Target Start/End: Complemental strand, 47219257 - 47219179
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgatttt 238  Q
    |||||||||||||| ||||| || ||||||||||  |||||||||||||||||||| |||||||||||| || ||||||    
T  47219257 taggtttaattgcatttttcacctctatcttttgctaattgtgcgattttgcaccttatgtttttaaaccagcgatttt 47219179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 13198957 - 13198908
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  13198957 ttaattgcacttttcccccctatcttttgttaattgtgcgattttgcacc 13198908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 9380798 - 9380718
Alignment:
Q  159 ataggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||| |||||||||||||||||||||||  |||| |||||||||||||||||||  |||  ||||||||||| |||||||    
T  9380798 ataggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcactccatagttttaaacgagcgattttg 9380718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 160 - 239
Target Start/End: Original strand, 292780 - 292859
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||| |||||||||||||||||||||||  |||| ||||||||| |||||||| |||||  ||||||||||| |||||||    
T  292780 taggcttaattgcacttttcccccctatagtttgccaattgtgcaattttgcatctcatagttttaaacgagcgattttg 292859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 4239417 - 4239343
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||||||||||||| ||||||||  |||| |||||||||||||||||||| |||  ||||||||||| |||||||    
T  4239417 ttaattgcactttttccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttg 4239343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 9380310 - 9380384
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||||||||||||||||||||||  |||| ||||||||||||||||| || |||  ||||||||||| |||||||    
T  9380310 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgccccccatagttttaaacgagcgattttg 9380384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 11529171 - 11529245
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||||||||||||||| ||||| |||||| |||||||| ||||||||||| ||||||||||| || | |||||||    
T  11529171 ttaattgcacttttcctccctaacttttgccaattgtgtgattttgcaccccatgtttttaatcgtgcgattttg 11529245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 160 - 214
Target Start/End: Original strand, 16555513 - 16555567
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    |||| ||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  16555513 taggcttaattgcacttttcccccttatcttttgttaattgtgcgattttgcacc 16555567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 43292040 - 43292114
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||||  |||||||  ||||||||||||||||||||||||| |||  ||||||||||| |||||||    
T  43292040 ttaattgcacttttttcccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttg 43292114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 22681578 - 22681626
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  22681578 ttaattgcacttt-cccccctatcttttgtcaattgtgcgattttgcacc 22681626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 165 - 238
Target Start/End: Complemental strand, 23540303 - 23540230
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgatttt 238  Q
    ||||||||||||||| |||||||  |||||||||||||||||||||||||  ||  ||||||||||| ||||||    
T  23540303 ttaattgcacttttcacccctatagtttgtcaattgtgcgattttgcaccctatagttttaaacgagcgatttt 23540230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 151 - 239
Target Start/End: Original strand, 32703214 - 32703302
Alignment:
Q  151 ataaaaagataggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||| | ||| |||||||||||||||||||||||  |||| ||||||||||||| |||||| | |  ||||||||||| |||||||    
T  32703214 ataaaaaaaaaggcttaattgcacttttcccccctataatttgccaattgtgcgattatgcaccccgtagttttaaacgagcgattttg 32703302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 49178866 - 49178818
Alignment:
Q  166 taattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  49178866 taattgcacttttctcccctatcttttgccaattgtgcgattttgcacc 49178818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 169016 - 169091
Alignment:
Q  165 ttaattgcacttttc-ccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||||| ||||||||  |||| |||||||||||||||||||| |||  ||||||||||| |||||||    
T  169016 ttaattgcacttttctccccctatagtttgccaattgtgcgattttgcaccccataattttaaacgagcgattttg 169091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 165 - 224
Target Start/End: Complemental strand, 16555868 - 16555809
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgttttt 224  Q
    ||||||||||||||||||| |||||||||  ||||||||||||||||||| ||| |||||    
T  16555868 ttaattgcacttttcccccttatcttttgctaattgtgcgattttgcaccccatcttttt 16555809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 214
Target Start/End: Complemental strand, 22681936 - 22681881
Alignment:
Q  159 ataggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    ||||| ||||||||||||||||| |||||||||||| |||||||| ||||||||||    
T  22681936 ataggcttaattgcacttttccctcctatcttttgttaattgtgcaattttgcacc 22681881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 26207797 - 26207723
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||| |||||||||||||  |||| |||||||||||||||||||| |||  ||| ||||||| |||||||    
T  26207797 ttaattgcatttttcccccctatagtttgccaattgtgcgattttgcaccccattgtttaaaacgagcgattttg 26207723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 39086674 - 39086600
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||||| ||| |||  |||| ||||||||||||||||||||| ||  ||||||||||| |||||||    
T  39086674 ttaattgcacttttctcccatatagtttgccaattgtgcgattttgcacctaatagttttaaacgagcgattttg 39086600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 56506631 - 56506551
Alignment:
Q  159 ataggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||| ||||||||||||||| ||| ||||||||| ||||||||| |||||| ||  |||||||||||  ||| |||||||    
T  56506631 ataggcttaattgcacttttcacccttatcttttgccaattgtgcaattttgtactccatgtttttaattgagcgattttg 56506551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 160 - 223
Target Start/End: Original strand, 5205986 - 5206049
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttt 223  Q
    |||| |||||||||||||||| ||||||||||||| ||||  ||||||||||||| ||| ||||    
T  5205986 taggcttaattgcacttttcctccctatcttttgttaatttggcgattttgcaccccatctttt 5206049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 165 - 212
Target Start/End: Original strand, 11241392 - 11241439
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgca 212  Q
    |||||||||||||||| || |||||||||| |||||||||||||||||    
T  11241392 ttaattgcacttttcctccttatcttttgttaattgtgcgattttgca 11241439  T

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Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 214
Target Start/End: Original strand, 13198604 - 13198655
Alignment:
Q  163 gtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    ||||||||||||||||| ||  ||||||||| ||||||||||||||||||||    
T  13198604 gtttaattgcacttttctcctttatcttttgccaattgtgcgattttgcacc 13198655  T

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Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 160 - 239
Target Start/End: Original strand, 39744028 - 39744107
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||| |||||||||||||| ||||||||  |||  ||||||||||||||| |||| |||  ||||||||||| |||||||    
T  39744028 taggcttaattgcactttttccccctatagtttaccaattgtgcgattttccaccccataattttaaacgagcgattttg 39744107  T

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Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 44468959 - 44468900
Alignment:
Q  180 ccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||  |||| ||||||||||||||||||||||||  ||||||||||| |||||||    
T  44468959 ccccctatagtttgccaattgtgcgattttgcacctcatagttttaaacgagcgattttg 44468900  T

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Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 3930535 - 3930482
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    |||| ||||||||||||||||||| |||||||||  |||||||||||||||||||    
T  3930535 taggcttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcacc 3930482  T

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Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 8181994 - 8182044
Alignment:
Q  165 ttaattgcacttttcccccctatc-ttttgtcaattgtgcgattttgcacc 214  Q
    |||||||||||||| ||||||||| ||||| ||||||||||||||||||||    
T  8181994 ttaattgcacttttgccccctatcgttttgccaattgtgcgattttgcacc 8182044  T

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Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 239
Target Start/End: Original strand, 12757766 - 12757843
Alignment:
Q  161 aggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||| ||||||||  | |||  ||||||||||||||||||||||| |||||  ||||||||||| |||||||    
T  12757766 aggtttaattgtacttttccttc-tatagtttgtcaattgtgcgattttgcatctcatagttttaaacgagcgattttg 12757843  T

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Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 26207364 - 26207437
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||| |||||||||  |||| |||||||||||||||||||| |||  ||| ||||||| |||||||    
T  26207364 ttaattgcacttt-cccccctatagtttgccaattgtgcgattttgcaccccattgtttaaaacgagcgattttg 26207437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 43292408 - 43292334
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||| ||||||||||| |  |||| |||||||||||||||||| | |||  ||||||||||| |||||||    
T  43292408 ttaattgcatttttcccccctttagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttg 43292334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 5206280 - 5206232
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    ||||||||||||||||||| |||||||| | |||||||||||||||||||    
T  5206280 ttaattgcacttttcccccttatctttt-ttaattgtgcgattttgcacc 5206232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 18077253 - 18077204
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    ||||||||||||||| ||||||| |||||  |||||||||||||||||||    
T  18077253 ttaattgcacttttcacccctattttttgctaattgtgcgattttgcacc 18077204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 227
Target Start/End: Original strand, 23432473 - 23432542
Alignment:
Q  159 ataggtttaattgcacttttcccccctatctttt-gtcaattgtgcgattttgcacctcatgtttttaaa 227  Q
    ||||| |||||||||||||| |||||||| |||| ||||||||||| ||| |||||| ||| ||||||||    
T  23432473 ataggcttaattgcacttttgccccctatttttttgtcaattgtgcaattctgcaccccatctttttaaa 23432542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 239
Target Start/End: Complemental strand, 48406438 - 48406362
Alignment:
Q  162 ggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||||||||| ||||| |||||||||  |||| ||||||||||||||||||||  ||  ||||||||||| |||||||    
T  48406438 ggtttaattgtacttt-cccccctataatttgccaattgtgcgattttgcaccctatagttttaaacgagcgattttg 48406362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 11241716 - 11241653
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgttttt 224  Q
    |||| ||||||| ||||||||||| ||||||||| |||||||| ||||||||||| ||| |||||    
T  11241716 taggcttaattgtacttttccccc-tatcttttgccaattgtgggattttgcaccccatcttttt 11241653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 210
Target Start/End: Original strand, 24775642 - 24775690
Alignment:
Q  163 gtttaattgcacttttcccccctat-cttttgtcaattgtgcgattttg 210  Q
    |||||||||||||||| ||||||||  ||||||||||||||||||||||    
T  24775642 gtttaattgcacttttgccccctatatttttgtcaattgtgcgattttg 24775690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 214
Target Start/End: Original strand, 49178644 - 49178692
Alignment:
Q  167 aattgcacttttcccccctatc-ttttgtcaattgtgcgattttgcacc 214  Q
    |||||||||||| ||||||||| ||||| ||||||||||||||||||||    
T  49178644 aattgcacttttgccccctatctttttgccaattgtgcgattttgcacc 49178692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 25162349 - 25162290
Alignment:
Q  180 ccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||||||| |||||||||||||| ||||||||||  |||  ||||||||||| |||||||    
T  25162349 ccccctatattttgtcaattgtgtgattttgcactccatagttttaaacgagcgattttg 25162290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 45828997 - 45829071
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||| ||||||| | ||||||||||  |||||||||||||||| |||  ||||| |||||| || |||||||    
T  45828997 ttaattgtacttttcactcctatcttttaccaattgtgcgattttgtacccaatgttattaaacaagcgattttg 45829071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 48405965 - 48406038
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||||||||| |||  |||| ||||| ||| |||||||||| |||  ||||||||||| |||||||    
T  48405965 ttaattgcacttttccccc-tatagtttgccaattatgcaattttgcaccccatagttttaaacgagcgattttg 48406038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 215
Target Start/End: Complemental strand, 16555743 - 16555694
Alignment:
Q  167 aattgcacttttcccccctatc-ttttgtcaattgtgcgattttgcacct 215  Q
    ||||||||||||||||| |||| |||||  ||||||||||||||||||||    
T  16555743 aattgcacttttcccccttatctttttgctaattgtgcgattttgcacct 16555694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 23539838 - 23539916
Alignment:
Q  159 ataggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||| |||||||||||||  ||||||||  |||| |||||||||||||||||||| |||  ||| ||||||  |||||||    
T  23539838 ataggcttaattgcacttt--ccccctatagtttgccaattgtgcgattttgcaccccatagtttaaaacgaacgattttg 23539916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 25225449 - 25225400
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    |||||||||||| |  | ||||||||||| ||||||||||||||||||||    
T  25225449 ttaattgcacttctgtctcctatcttttgccaattgtgcgattttgcacc 25225400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 271
Target Start/End: Original strand, 36095934 - 36095963
Alignment:
Q  242 atgtattttagtgatgatgtgtctgatttt 271  Q
    ||||||||||||||||||||||||||||||    
T  36095934 atgtattttagtgatgatgtgtctgatttt 36095963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 239
Target Start/End: Complemental strand, 39912509 - 39912464
Alignment:
Q  194 tcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||||||||| | |||  |||||||||||||||||||    
T  39912509 tcaattgtgcgattttgcatcccatagttttaaacgagtgattttg 39912464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 54508818 - 54508867
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    |||||||||||||| || || |||||||| |||||||| |||||||||||    
T  54508818 ttaattgcactttttcctccaatcttttgccaattgtgtgattttgcacc 54508867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 213
Target Start/End: Complemental strand, 7603469 - 7603422
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcac 213  Q
    |||||||||||||| |||| ||||||||  |||||||||||||||||||    
T  7603469 ttaattgcactttttcccc-tatctttttacaattgtgcgattttgcac 7603422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 214
Target Start/End: Complemental strand, 27304943 - 27304895
Alignment:
Q  167 aattgcacttttcccccctatc-ttttgtcaattgtgcgattttgcacc 214  Q
    |||||||||||| ||||||||| |||||  |||||||||||||||||||    
T  27304943 aattgcactttttccccctatctttttgctaattgtgcgattttgcacc 27304895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 214
Target Start/End: Complemental strand, 35393841 - 35393778
Alignment:
Q  150 aataaaaagataggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    |||||||| | ||| ||||||||||||||| ||| |||||||||  |||||||||| ||||||||    
T  35393841 aataaaaaaaaaggcttaattgcacttttcaccc-tatcttttgctaattgtgcgaatttgcacc 35393778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 61; Significance: 3e-26; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 242 - 310
Target Start/End: Original strand, 1927859 - 1927927
Alignment:
Q  242 atgtattttagtgatgatgtgtctgattttaatttgatgtgcatgcaatgtaatatgaaaaacctaaaa 310  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  1927859 atgtattttagtgatgatgtgcctgattttaatctgatgtgcatgcaatgtaatatgaaaaacctaaaa 1927927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 151 - 239
Target Start/End: Complemental strand, 1928498 - 1928411
Alignment:
Q  151 ataaaaagataggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||||||  |||||||||||||| |||||| |||||||||||| |||||||||||||||||||| ||| |||||||||||||| |||||    
T  1928498 ataaaaaattaggtttaattgca-ttttcctccctatcttttgccaattgtgcgattttgcaccccatatttttaaacgagtggttttg 1928411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 8314016 - 8314090
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||  ||||||||||||| | |||||||    
T  8314016 ttaattgcacttttctcccctatattttgtcaattgtgcgattttgcacccaatgtttttaaacgtgcgattttg 8314090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 153 - 239
Target Start/End: Original strand, 48159888 - 48159974
Alignment:
Q  153 aaaaagataggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||| ||||| |||||||||||||||||||||||  |||| |||||||||||||||||||| |||  ||||||||||| |||||||    
T  48159888 aaaaaaataggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttg 48159974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 165 - 238
Target Start/End: Original strand, 53687891 - 53687964
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgatttt 238  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||| |||  ||||||||||| ||||||    
T  53687891 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgatttt 53687964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 160 - 238
Target Start/End: Original strand, 47665909 - 47665987
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgatttt 238  Q
    |||| |||||||||||||| |||| |||  |||||||||||||||||||||||||||||  ||| ||||||||||||||    
T  47665909 taggcttaattgcactttttccccttatagtttgtcaattgtgcgattttgcacctcattgtttaaaacgagtgatttt 47665987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 10293960 - 10293911
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  10293960 ttaattgcacttttcccccctatcttttgttaattgtgcgattttgcacc 10293911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 20969070 - 20969021
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  20969070 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 20969021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 162 - 239
Target Start/End: Complemental strand, 27238954 - 27238877
Alignment:
Q  162 ggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||||||||||| ||||  |||| |||||||||||||||||||| |||  ||||||||||| |||||||    
T  27238954 ggtttaattgcacttttcccctctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttg 27238877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 162 - 239
Target Start/End: Original strand, 53766163 - 53766240
Alignment:
Q  162 ggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||||||| || |||||  ||||||||||||||||||||||||| |||  ||||||||||| |||||||    
T  53766163 ggtttaattgcactttttcctcctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttg 53766240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 3353607 - 3353528
Alignment:
Q  159 ataggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||| ||||||||||||||| |||  |||| ||||||||||||||||||||||||  ||||||||||| |||||||    
T  3353607 ataggtttagttgcacttttccccc-tatagtttgccaattgtgcgattttgcacctcatagttttaaacgagcgattttg 3353528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 160 - 239
Target Start/End: Complemental strand, 26007675 - 26007596
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||||||||| ||||||||  |||| ||||||| ||||||||||| ||||  ||||||||||| |||||||    
T  26007675 taggtttaattgcactttttccccctatagtttgccaattgtacgattttgcacttcataattttaaacgagcgattttg 26007596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 26007185 - 26007258
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||| |||||||||||||  ||||||||||||||||||||||||| |||  ||||||||||| |||||||    
T  26007185 ttaattgca-ttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttg 26007258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 42673346 - 42673273
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||||||||| |||  ||||||||||||||||||||||||| |||  ||||||||||| |||||||    
T  42673346 ttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttg 42673273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 48160384 - 48160310
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||| |||||||||  |||| |||||||||||||||||||| |||  ||||||||||| |||||||    
T  48160384 ttaattgcactttccccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttg 48160310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 20968721 - 20968770
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  20968721 ttaattgcacctttcccccctatcttttgttaattgtgcgattttgcacc 20968770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 165 - 237
Target Start/End: Original strand, 3353131 - 3353202
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattt 237  Q
    ||||||||||||||||||| |||  ||||||||||||||||||||||||| |||  ||||||||||| |||||    
T  3353131 ttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattt 3353202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 40849018 - 40848938
Alignment:
Q  159 ataggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||| |||||||||||||||||| ||||  |||| |||||||||||||||||||| |||  |||||||| || |||||||    
T  40849018 ataggcttaattgcacttttcccctctatagtttgccaattgtgcgattttgcaccccatagttttaaacaagcgattttg 40848938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 211
Target Start/End: Original strand, 42455788 - 42455839
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgc 211  Q
    |||| |||||||||||||||||||||||  ||||||||||||||||||||||    
T  42455788 taggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgc 42455839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 8315137 - 8315084
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    |||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  8315137 taggcttaattgcacttt-cccccctatattttgtcaattgtgcgattttgcacc 8315084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 181 - 239
Target Start/End: Complemental strand, 21896546 - 21896488
Alignment:
Q  181 cccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||| |||||||||||||||||||||||||| |||| ||||| ||||| |||||||    
T  21896546 cccctatattttgtcaattgtgcgattttgcaccccatggttttatacgagcgattttg 21896488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 22429161 - 22429235
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||||| ||||||| ||||| ||||||||||| ||||||||  ||  ||||||||||| |||||||    
T  22429161 ttaattgcacttttctcccctatattttgccaattgtgcgactttgcacccaatagttttaaacgagcgattttg 22429235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 22429646 - 22429573
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||| ||| |||||  ||||||||||||||||||||||||| |||  ||||||||||| |||||||    
T  22429646 ttaattgcacttt-ccctcctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttg 22429573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 160 - 238
Target Start/End: Complemental strand, 36181046 - 36180968
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgatttt 238  Q
    |||| |||||||||||||||| ||||||  ||||| ||||||||||||||| ||| |||  ||||||||||| ||||||    
T  36181046 taggcttaattgcacttttcctccctatagtttgttaattgtgcgattttgtaccccatagttttaaacgagcgatttt 36180968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 47666386 - 47666312
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||||||||||||||||||||||  |||| ||||||||| |||||||||| |||  ||| ||||||| |||||||    
T  47666386 ttaattgcacttttcccccctatagtttgccaattgtgcaattttgcaccccattgtttaaaacgagcgattttg 47666312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 1927775 - 1927824
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    |||||||||| |||||||||||||||||| ||||| ||||||||||||||    
T  1927775 ttaattgcacctttcccccctatcttttgccaattatgcgattttgcacc 1927824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 10293611 - 10293660
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    ||||||||| ||||  ||||||||||||||||||||||||||||||||||    
T  10293611 ttaattgcatttttttcccctatcttttgtcaattgtgcgattttgcacc 10293660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 4947263 - 4947311
Alignment:
Q  166 taattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    |||||||||||||| ||||||| |||||| |||||||||||||||||||    
T  4947263 taattgcacttttcacccctattttttgttaattgtgcgattttgcacc 4947311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 14015692 - 14015748
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctc 216  Q
    |||||||||||||||||||  ||  |||||||||||||| |||||||||||||||||    
T  14015692 taggtttaattgcacttttttcctttatcttttgtcaatcgtgcgattttgcacctc 14015748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 214
Target Start/End: Original strand, 18874887 - 18874934
Alignment:
Q  167 aattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    |||||||||||| ||||||||||||||  |||||||||||||||||||    
T  18874887 aattgcactttttccccctatcttttgctaattgtgcgattttgcacc 18874934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 160 - 239
Target Start/End: Original strand, 27238463 - 27238542
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||| ||||||| ||||||||| |||||  |||| ||||||||||||||||||||  ||  ||||||||||| |||||||    
T  27238463 taggcttaattgtacttttccctcctatagtttgccaattgtgcgattttgcaccctatagttttaaacgagcgattttg 27238542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 214
Target Start/End: Complemental strand, 45060928 - 45060873
Alignment:
Q  159 ataggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    ||||| ||||||||||||||| |||||||||||||  |||||||||||||| ||||    
T  45060928 ataggcttaattgcacttttcacccctatcttttgctaattgtgcgattttacacc 45060873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 10348850 - 10348776
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||||||||||||| || | |||  |||| |||||||||||||||||||| |||  ||||||||||| |||||||    
T  10348850 ttaattgcactttttcctcatatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttg 10348776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 40848524 - 40848597
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||||||||| |||  |||| ||||||||||||||| |||| |||  ||||||||||| |||||||    
T  40848524 ttaattgcacttttccccc-tatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttg 40848597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 42672981 - 42673054
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||||||||| |||  |||| |||||||||||||||||||| |||  ||||||||||  |||||||    
T  42672981 ttaattgcacttttccccc-tatagtttgccaattgtgcgattttgcaccccatagttttaaacgatcgattttg 42673054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 3644834 - 3644785
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    ||||||||| ||||||||| ||| |||||| |||||||||||||||||||    
T  3644834 ttaattgcatttttcccccttattttttgttaattgtgcgattttgcacc 3644785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 153 - 214
Target Start/End: Original strand, 9026727 - 9026787
Alignment:
Q  153 aaaaagataggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    ||||| ||||||||||||||| |||||| || |||||||||| |||||||| ||||||||||    
T  9026727 aaaaaaataggtttaattgcatttttcctcc-tatcttttgttaattgtgcaattttgcacc 9026787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 18875242 - 18875193
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    |||||||||||||| ||||||||||||||  |||||| ||||||||||||    
T  18875242 ttaattgcacttttgccccctatcttttgctaattgtacgattttgcacc 18875193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 47871172 - 47871124
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    ||||||||||||||||||| |||||||||  |||||||||||||||||||    
T  47871172 ttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcacc 47871124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 214
Target Start/End: Complemental strand, 1101143 - 1101092
Alignment:
Q  163 gtttaattgcacttttcccccctatctttt-gtcaattgtgcgattttgcacc 214  Q
    |||||||||||||||| |||| |||||||| ||||||||||||||||||||||    
T  1101143 gtttaattgcacttttgcccc-tatctttttgtcaattgtgcgattttgcacc 1101092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 238
Target Start/End: Original strand, 10771523 - 10771579
Alignment:
Q  182 ccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgatttt 238  Q
    ||||||||||||||||||||||||||||  ||  ||||||||||| |||| ||||||    
T  10771523 ccctatcttttgtcaattgtgcgattttttactccatgtttttaaccgagcgatttt 10771579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 214
Target Start/End: Complemental strand, 13657675 - 13657623
Alignment:
Q  163 gtttaattgcacttttcccccctatctttt-gtcaattgtgcgattttgcacc 214  Q
    ||||||||||||||||  |||||||||||| | ||||||||||||||||||||    
T  13657675 gtttaattgcacttttgtcccctatctttttgccaattgtgcgattttgcacc 13657623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 213
Target Start/End: Complemental strand, 14015925 - 14015873
Alignment:
Q  163 gtttaattgcactttt-cccccctatctttt-gtcaattgtgcgattttgcac 213  Q
    |||||||||||||||| |||||||||||||| | |||||||||||||||||||    
T  14015925 gtttaattgcacttttgcccccctatctttttgccaattgtgcgattttgcac 14015873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 213
Target Start/End: Complemental strand, 17441114 - 17441066
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcac 213  Q
    ||||||||| |||||| | ||||||||||| ||||||||||||||||||    
T  17441114 ttaattgcatttttcctctctatcttttgttaattgtgcgattttgcac 17441066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 214
Target Start/End: Complemental strand, 23630089 - 23630037
Alignment:
Q  162 ggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    ||||||||||||||||| || ||||| |||||  |||||||||||||||||||    
T  23630089 ggtttaattgcactttttcctcctattttttggtaattgtgcgattttgcacc 23630037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 240
Target Start/End: Original strand, 36180559 - 36180632
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttga 240  Q
    |||||||||| |||||||  |||  ||||||||||||||||||||||| | |||  ||||||||||| ||||||||    
T  36180559 ttaattgcacatttcccc--tatagtttgtcaattgtgcgattttgcatcccatagttttaaacgagcgattttga 36180632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 160 - 223
Target Start/End: Complemental strand, 14016019 - 14015957
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttt 223  Q
    ||||||||||||||||||||  || |||||||||  ||||||||||||||||||| ||| ||||    
T  14016019 taggtttaattgcacttttcatcc-tatcttttgctaattgtgcgattttgcaccccatctttt 14015957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 165 - 224
Target Start/End: Original strand, 17372301 - 17372360
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgttttt 224  Q
    |||||||||| ||| |||||||| |||||  ||||||||||||||||||| | |||||||    
T  17372301 ttaattgcaccttttccccctattttttgctaattgtgcgattttgcaccccctgttttt 17372360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 184 - 239
Target Start/End: Original strand, 28702299 - 28702354
Alignment:
Q  184 ctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||||||||||||||| |||||||||||||  ||| |||||||  |||||||||||    
T  28702299 ctatcttttgtcaattatgcgattttgcactccatatttttaattgagtgattttg 28702354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 10348482 - 10348556
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||||| ||| |||  |||||||||||| | |||||||| | |||  ||||||||||| |||||||    
T  10348482 ttaattgcacttttctcccgtatagtttgtcaattgttcaattttgcatcccataattttaaacgagcgattttg 10348556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 216
Target Start/End: Original strand, 18875017 - 18875067
Alignment:
Q  167 aattgcacttttcccccctatc-ttttgtcaattgtgcgattttgcacctc 216  Q
    |||||||||||| ||||||||| |||||  |||||||||||||||||||||    
T  18875017 aattgcacttttgccccctatctttttgctaattgtgcgattttgcacctc 18875067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 24485510 - 24485437
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||||| ||| |||  |||| |||||||||||||||||||| |||  ||||||| ||| |||||||    
T  24485510 ttaattgcacttttctccc-tatagtttgccaattgtgcgattttgcaccccatagttttaaatgagcgattttg 24485437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 214
Target Start/End: Original strand, 26540693 - 26540742
Alignment:
Q  164 tttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    ||||||||||||||| |||| ||| ||||||||||||||| ||||||||||    
T  26540693 tttaattgcacttttgcccc-tattttttgtcaattgtgcaattttgcacc 26540742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 44007970 - 44008044
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||||||||||||||| ||||||  ||| |||||||||| | |||||| || ||  ||||||||||| |||||||    
T  44007970 ttaattgcacttttcctccctatagtttttcaattgtgcaaatttgcatcttatagttttaaacgagcgattttg 44008044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 1100918 - 1100967
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    |||||||||||| ||| ||||||||||||  |||||||||||||| ||||    
T  1100918 ttaattgcacttatccaccctatcttttgcaaattgtgcgatttttcacc 1100967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 21895655 - 21895720
Alignment:
Q  160 taggtttaattgcacttttccccc-ctatcttttgtcaattgtgcgattttgcacctcatgttttt 224  Q
    |||| |||||||||||||| |||| |||| ||||| |||||||| ||||||||||| ||| |||||    
T  21895655 taggcttaattgcactttttccccactatgttttgccaattgtgtgattttgcaccccatcttttt 21895720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 210
Target Start/End: Original strand, 45060599 - 45060644
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttg 210  Q
    |||||||||||||||||| ||||||||||  |||| ||||||||||    
T  45060599 ttaattgcacttttccccactatcttttgctaattatgcgattttg 45060644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 53766630 - 53766581
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    |||||||||||||||||||||||  ||||  |||||||| ||||||||||    
T  53766630 ttaattgcacttttcccccctatagtttgcaaattgtgcaattttgcacc 53766581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 214
Target Start/End: Original strand, 10293735 - 10293783
Alignment:
Q  167 aattgcacttttcccccctatctttt-gtcaattgtgcgattttgcacc 214  Q
    |||||||||||| |||| |||||||| || |||||||||||||||||||    
T  10293735 aattgcacttttgccccttatctttttgttaattgtgcgattttgcacc 10293783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 163 - 214
Target Start/End: Complemental strand, 17372527 - 17372475
Alignment:
Q  163 gtttaattgcacttttcccccctatctttt-gtcaattgtgcgattttgcacc 214  Q
    ||||||| |||||||| | ||||||||||| | ||||||||||||||||||||    
T  17372527 gtttaatggcacttttgcaccctatctttttgccaattgtgcgattttgcacc 17372475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 42456216 - 42456172
Alignment:
Q  195 caattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||||||||||||||||||| |||  ||||||||||| |||||||    
T  42456216 caattgtgcgattttgcaccccatagttttaaacgagcgattttg 42456172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 3e-26; HSPs: 58)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 2639539 - 2639459
Alignment:
Q  159 ataggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||| |||||||    
T  2639539 ataggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttg 2639459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 160 - 239
Target Start/End: Original strand, 26841585 - 26841664
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||| ||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||| |||||||    
T  26841585 taggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttg 26841664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 164 - 239
Target Start/End: Original strand, 7591203 - 7591278
Alignment:
Q  164 tttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||||||| ||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||| |||||||    
T  7591203 tttaattgtacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttg 7591278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 18296079 - 18296153
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||| ||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||| |||||||    
T  18296079 ttaattgtacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttg 18296153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 26842289 - 26842215
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||| |||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||| |||||||    
T  26842289 ttaagtgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttg 26842215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 152 - 239
Target Start/End: Original strand, 7664238 - 7664325
Alignment:
Q  152 taaaaagataggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||||| ||||| |||||||||||||||||||||||  ||| ||||||||||||||||||||| |||  ||||||||||| |||||||    
T  7664238 taaaaaaataggcttaattgcacttttcccccctatagtttatcaattgtgcgattttgcaccccatagttttaaacgagcgattttg 7664325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 2638823 - 2638897
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||| ||||| ||||||||||||| |||||||||||||||||||| ||| |||||||||||| |||||||    
T  2638823 ttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccatatttttaaacgagcgattttg 2638897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 7591901 - 7591827
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||||||||  |||| | |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  7591901 ttaattgcatctttcactcctatcttttgtcaattgtgcgattttgcaccccatgtttttaaacgagcgattttg 7591827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 161 - 239
Target Start/End: Original strand, 8851147 - 8851225
Alignment:
Q  161 aggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||||||||||||||||||||||||||  |||| |||||||||||||||||||| |||  ||||||||||| |||||||    
T  8851147 aggtttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttg 8851225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 8851633 - 8851559
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||| |||  ||||||||||| |||||||    
T  8851633 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttg 8851559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 153 - 214
Target Start/End: Original strand, 30190914 - 30190975
Alignment:
Q  153 aaaaagataggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    ||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  30190914 aaaaaaataggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 30190975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 7664724 - 7664650
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||||||||||||||| ||||||  ||||||||||||||||||||||||| |||  ||||||||||| |||||||    
T  7664724 ttaattgcacttttcctccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttg 7664650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 161 - 239
Target Start/End: Original strand, 26692395 - 26692473
Alignment:
Q  161 aggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||||||||||||||||| ||| ||||  ||||||||||||||||||||||||| |||  ||||||||||| |||||||    
T  26692395 aggtttaattgcactttttccctctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttg 26692473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 37720207 - 37720281
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||||||||||||||||||||||  |||| |||||||||||||||||||| |||  ||||||||||| |||||||    
T  37720207 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttg 37720281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 6495786 - 6495721
Alignment:
Q  151 ataaaaagataggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctc 216  Q
    ||||||| | ||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  6495786 ataaaaaaaaaggcttaattgcacttttcctccctatcttttgtgaattgtgcgattttgcacctc 6495721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 20347515 - 20347466
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  20347515 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 20347466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 162 - 239
Target Start/End: Complemental strand, 26692874 - 26692797
Alignment:
Q  162 ggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||||||||||| ||||  |||| |||||||||||||||||||| |||  ||||||||||| |||||||    
T  26692874 ggtttaattgcacttttcccctctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttg 26692797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 165 - 224
Target Start/End: Complemental strand, 18296744 - 18296685
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgttttt 224  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||| ||| |||||    
T  18296744 ttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatcttttt 18296685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 165 - 224
Target Start/End: Original strand, 24832334 - 24832393
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgttttt 224  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||| ||| |||||    
T  24832334 ttaattgcacttttcccccctatcttttgctaattgtgcgattttgcaccccatcttttt 24832393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 160 - 239
Target Start/End: Complemental strand, 41790968 - 41790889
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||| ||||||||||||||||||||||| ||||| ||||||||||||||||| || |||  ||| ||||||| |||||||    
T  41790968 taggcttaattgcacttttcccccctatattttgccaattgtgcgattttgccccccattgtttaaaacgagcgattttg 41790889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 6325398 - 6325324
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||||||||| |||  |||| ||||||||||||||||||||||||  | ||||||||| |||||||    
T  6325398 ttaattgcacttttcccccatatagtttgccaattgtgcgattttgcacctcatagtattaaacgagcgattttg 6325324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 6171507 - 6171458
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  6171507 ttaattgcacttttcccccctatcttttgccaattgtgggattttgcacc 6171458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 11883626 - 11883675
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||    
T  11883626 ttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacc 11883675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 11883977 - 11883928
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||    
T  11883977 ttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacc 11883928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 162 - 223
Target Start/End: Complemental strand, 18055370 - 18055309
Alignment:
Q  162 ggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttt 223  Q
    ||||||||||||||||| ||| ||| ||||||||||||||||||||||||||| ||| ||||    
T  18055370 ggtttaattgcactttttccctctaccttttgtcaattgtgcgattttgcaccccatctttt 18055309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 30191276 - 30191227
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    |||||||||||||||||||||||||||| | |||||||||||||||||||    
T  30191276 ttaattgcacttttcccccctatcttttattaattgtgcgattttgcacc 30191227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 161 - 214
Target Start/End: Complemental strand, 40469784 - 40469731
Alignment:
Q  161 aggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    |||||||||||||||||| ||||||||||||||  |||||||||||||||||||    
T  40469784 aggtttaattgcactttttccccctatcttttgctaattgtgcgattttgcacc 40469731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 214
Target Start/End: Original strand, 15920779 - 15920830
Alignment:
Q  163 gtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    |||||||| |||||||||| |||||||||||| |||||||||||||||||||    
T  15920779 gtttaatttcacttttccctcctatcttttgttaattgtgcgattttgcacc 15920830  T

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Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 214
Target Start/End: Original strand, 20347160 - 20347215
Alignment:
Q  159 ataggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    ||||| |||||| ||||||||||| ||||||||||| |||||||||||||||||||    
T  20347160 ataggcttaattacacttttcccctctatcttttgttaattgtgcgattttgcacc 20347215  T

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Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 160 - 214
Target Start/End: Original strand, 5378659 - 5378713
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    |||| |||||||||||||||||||||||  |||| ||||||||||||||||||||    
T  5378659 taggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcacc 5378713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 165 - 215
Target Start/End: Original strand, 6171159 - 6171208
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacct 215  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  6171159 ttaattgcacttttcccc-ctatcttttgttaattgtgcgattttgcacct 6171208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 239
Target Start/End: Original strand, 6324924 - 6324994
Alignment:
Q  169 ttgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||||||||||||||||||  |||| |||||||||||||||||| | |||  ||||||||||| |||||||    
T  6324924 ttgcacttttcccccctatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttg 6324994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 16910830 - 16910904
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||||||||| | |  |||| |||||||||||||||||||| |||  ||||||||||| |||||||    
T  16910830 ttaattgcacttttcccccatgtagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttg 16910904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 17850981 - 17851054
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||||||||||||||||||||||  |||| |||||||||||||||||||| |||  |||| |||||| |||||||    
T  17850981 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagtttt-aacgagcgattttg 17851054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 18750176 - 18750103
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||||||||||| |||||| |||  ||||||||||||||||||||||||| |||  ||||||||||| |||||||    
T  18750176 ttaattgcacttctccccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttg 18750103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 160 - 214
Target Start/End: Original strand, 29230280 - 29230334
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    |||| |||||||||||||||| | ||||||||||||||||||| |||||||||||    
T  29230280 taggcttaattgcacttttcctctctatcttttgtcaattgtgtgattttgcacc 29230334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 164 - 214
Target Start/End: Original strand, 29343583 - 29343633
Alignment:
Q  164 tttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    ||||||||||||||||| | ||||||||||||||||||| |||||||||||    
T  29343583 tttaattgcacttttcctctctatcttttgtcaattgtgtgattttgcacc 29343633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 161 - 214
Target Start/End: Complemental strand, 32673197 - 32673145
Alignment:
Q  161 aggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    |||||||||||||||||| |||| ||||||||| ||||||||||||||||||||    
T  32673197 aggtttaattgcactttttcccc-tatcttttgccaattgtgcgattttgcacc 32673145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 239
Target Start/End: Original strand, 41790491 - 41790567
Alignment:
Q  162 ggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||||||||||| ||||||||| |||  ||||||||||||||||||||||||| |||  ||| ||||||| |||||||    
T  41790491 ggtttaattgcatttttccccc-tatagtttgtcaattgtgcgattttgcaccccattgtttaaaacgagcgattttg 41790567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 154 - 214
Target Start/End: Complemental strand, 5380021 - 5379961
Alignment:
Q  154 aaaagataggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    |||| ||||| |||||||||||||||||||||||  |||  ||||||||||||||||||||    
T  5380021 aaaaaataggcttaattgcacttttcccccctatagtttaccaattgtgcgattttgcacc 5379961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 163 - 214
Target Start/End: Complemental strand, 43495537 - 43495486
Alignment:
Q  163 gtttaattgcacttttcccccctatctttt-gtcaattgtgcgattttgcacc 214  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  43495537 gtttaattgcacttttccccc-tatctttttgtcaattgtgcgattttgcacc 43495486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 239
Target Start/End: Original strand, 5793446 - 5793524
Alignment:
Q  161 aggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||||||||||||| | |  |||| |||||||||||||||||| |  ||  ||||||||||| |||||||    
T  5793446 aggtttaattgcacttttcccccttgtagtttgccaattgtgcgattttgcatcctatagttttaaacgagcgattttg 5793524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 16911319 - 16911246
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||| | |||||||  |||| |||||||||||||||||||| |||  ||||||||||| |||||||    
T  16911319 ttaattgcacttt-cgcccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttg 16911246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 38490891 - 38490818
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||| || ||||||  |||  |||||||||||||||||| |||||| ||||||||||| |||||||    
T  38490891 ttaattgcacttt-cctccctatagtttaccaattgtgcgattttgcatctcatggttttaaacgagcgattttg 38490818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 6495470 - 6495518
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    |||||||||||||||| ||||||| ||||| |||||||||||||||||||    
T  6495470 ttaattgcacttttcctccctatc-tttgttaattgtgcgattttgcacc 6495518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 26737832 - 26737783
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    ||||||||||||||| |||||||||||||  || ||||||||||||||||    
T  26737832 ttaattgcacttttcacccctatcttttgctaactgtgcgattttgcacc 26737783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 163 - 214
Target Start/End: Original strand, 15321513 - 15321564
Alignment:
Q  163 gtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    ||||||||||||||||  ||||||||||||  ||| ||||||||||||||||    
T  15321513 gtttaattgcacttttgtcccctatctttttccaactgtgcgattttgcacc 15321564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 231
Target Start/End: Original strand, 19141447 - 19141512
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgag 231  Q
    |||||||||||||| ||||||||  |||| ||||||||| |||||||||| |||  |||||||||||    
T  19141447 ttaattgcactttttccccctatagtttgccaattgtgc-attttgcaccccatagttttaaacgag 19141512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 239
Target Start/End: Complemental strand, 19141901 - 19141826
Alignment:
Q  162 ggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||||||  ||||||||  |||| |||||||||||||||||| | |||  ||| ||||||| |||||||    
T  19141901 ggtttaattgcacttt--ccccctatagtttgccaattgtgcgattttgcatcccatagtttaaaacgagcgattttg 19141826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 239
Target Start/End: Original strand, 7979593 - 7979642
Alignment:
Q  190 tttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||| |||||||||||||||||||| |||  ||||||||||| |||||||    
T  7979593 tttgacaattgtgcgattttgcaccccatagttttaaacgagcgattttg 7979642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 32672845 - 32672894
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    ||||||||||||||   || |||||||||| |||||||||||||||||||    
T  32672845 ttaattgcacttttgttccttatcttttgttaattgtgcgattttgcacc 32672894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 40469430 - 40469479
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    ||||||| | ||||||| |||||||||||  |||||||||||||||||||    
T  40469430 ttaattgtatttttccctcctatcttttgctaattgtgcgattttgcacc 40469479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 215
Target Start/End: Complemental strand, 40469655 - 40469606
Alignment:
Q  167 aattgcacttttcccccctatc-ttttgtcaattgtgcgattttgcacct 215  Q
    ||||||||||||||||| |||| |||||  ||||||||||||||||||||    
T  40469655 aattgcacttttcccccttatcgttttgctaattgtgcgattttgcacct 40469606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 214
Target Start/End: Complemental strand, 6171383 - 6171335
Alignment:
Q  167 aattgcacttttcccccctatctttt-gtcaattgtgcgattttgcacc 214  Q
    |||||||||||| |||| |||||||| || |||||||||||||||||||    
T  6171383 aattgcacttttgccccttatctttttgttaattgtgcgattttgcacc 6171335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 212
Target Start/End: Original strand, 15321395 - 15321440
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgca 212  Q
    ||||||||||||||||||  |||||||||| |||||||| ||||||||    
T  15321395 ttaattgcacttttcccc--tatcttttgttaattgtgcaattttgca 15321440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 163 - 214
Target Start/End: Original strand, 18055167 - 18055219
Alignment:
Q  163 gtttaattgcacttttcccccctatc-ttttgtcaattgtgcgattttgcacc 214  Q
    |||||||||||||||| | ||||||  ||||| ||||||||||||||||||||    
T  18055167 gtttaattgcacttttgcaccctataattttgccaattgtgcgattttgcacc 18055219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 214
Target Start/End: Complemental strand, 26737706 - 26737658
Alignment:
Q  167 aattgcacttttcccccctatc-ttttgtcaattgtgcgattttgcacc 214  Q
    |||||||||||| ||||||||| |||||  |||||||||||||||||||    
T  26737706 aattgcacttttgccccctatctttttgctaattgtgcgattttgcacc 26737658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 209
Target Start/End: Original strand, 43495312 - 43495356
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgatttt 209  Q
    ||||||||||||||||| ||||| |||||  ||||||||||||||    
T  43495312 ttaattgcacttttcccacctatattttgctaattgtgcgatttt 43495356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 5e-25; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 44599492 - 44599566
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||| |||||||    
T  44599492 ttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttg 44599566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 44600186 - 44600112
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||| |||||||    
T  44600186 ttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttg 44600112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 160 - 239
Target Start/End: Original strand, 13863311 - 13863390
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||| ||||||||| ||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||| |||||||    
T  13863311 taggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttg 13863390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 162 - 239
Target Start/End: Original strand, 18863967 - 18864044
Alignment:
Q  162 ggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||| |||  ||||||||||| |||||||    
T  18863967 ggtttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttg 18864044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 160 - 239
Target Start/End: Original strand, 20418886 - 20418965
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||||||||||||||||||  |||| |||||||||||||||||||| |||  ||||||||||| |||||||    
T  20418886 taggtttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttg 20418965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 20419375 - 20419301
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||| |||  ||||||||||| |||||||    
T  20419375 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttg 20419301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 22740159 - 22740233
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||| |||  ||||||||||| |||||||    
T  22740159 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttg 22740233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 153 - 239
Target Start/End: Complemental strand, 37889322 - 37889236
Alignment:
Q  153 aaaaagataggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||| ||||| |||||||||||||||||||||||  |||| |||||||||||||||||||| |||  ||||||||||| |||||||    
T  37889322 aaaaatataggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttg 37889236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 160 - 239
Target Start/End: Complemental strand, 8643822 - 8643743
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||| |||||||||||||||  |||||||||||  |||||||||||||||||||| |||||| ||||||||| |||||||    
T  8643822 taggcttaattgcacttttcatccctatcttttaccaattgtgcgattttgcaccccatgttattaaacgagcgattttg 8643743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 160 - 239
Target Start/End: Original strand, 10533032 - 10533111
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||| |||||||||||||||||||||||  |||| |||||||||||||||||||| |||  ||||||||||| |||||||    
T  10533032 taggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttg 10533111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 3205144 - 3205070
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||| | |  ||||||||||| |||||||    
T  3205144 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccgtagttttaaacgagcgattttg 3205070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 9035344 - 9035270
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||||||||||||||||||||||  |||| |||||||||||||||||||| |||  ||||||||||| |||||||    
T  9035344 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttg 9035270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 9412381 - 9412327
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  9412381 taggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 9412327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 13864007 - 13863934
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||||| ||||||||||||| ||||||||||| |||||||| ||| |||||||||||| |||||||    
T  13864007 ttaattgcacttttcacccctatcttttgccaattgtgcga-tttgcaccccatatttttaaacgagcgattttg 13863934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 17156970 - 17157044
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||| |||  ||||||| ||| |||||||    
T  17156970 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaatgagcgattttg 17157044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 37888836 - 37888910
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||||||||||||||||||||||  |||| |||||||||||||||||||| |||  ||||||||||| |||||||    
T  37888836 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttg 37888910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 37972447 - 37972373
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||||||||||||||||||||||  |||| |||||||||||||||||||| |||  ||||||||||| |||||||    
T  37972447 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttg 37972373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 3687707 - 3687658
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  3687707 ttaattgcacttttcccccctatcttttgccaattgtgcgattttgcacc 3687658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 165 - 230
Target Start/End: Complemental strand, 38826964 - 38826899
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacga 230  Q
    ||||||||| |||||||||||||  |||||||||||||||||||||||||||||  ||||||||||    
T  38826964 ttaattgcatttttcccccctatagtttgtcaattgtgcgattttgcacctcatagttttaaacga 38826899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 163 - 239
Target Start/End: Complemental strand, 22740643 - 22740568
Alignment:
Q  163 gtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||||||||||| |||  ||||||||||||||||||||||||| |||  ||||||||||| |||||||    
T  22740643 gtttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttg 22740568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 160 - 239
Target Start/End: Complemental strand, 46816367 - 46816288
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||| |||||||||||||| ||| |||||||||  ||||| |||||||||||||| ||| |||||||||||| |||||||    
T  46816367 taggcttaattgcactttttcccgctatcttttaccaattatgcgattttgcaccccatatttttaaacgagcgattttg 46816288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 13744283 - 13744210
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||||||||| |||  ||||||||||||||||||||||||| |||  ||||||||||| |||||||    
T  13744283 ttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttg 13744210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 9412026 - 9412075
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  9412026 ttaattgcacttttcccccttatcttttgttaattgtgcgattttgcacc 9412075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 165 - 238
Target Start/End: Original strand, 48359323 - 48359395
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgatttt 238  Q
    ||||||||||||||||||| |||  ||||||||||||||||||||||||| |||  ||||||||||| ||||||    
T  48359323 ttaattgcacttttccccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgatttt 48359395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 152 - 212
Target Start/End: Complemental strand, 27096405 - 27096346
Alignment:
Q  152 taaaaagataggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgca 212  Q
    ||||||||  |||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  27096405 taaaaagaatggtttaattgcacttttccccc-tatcttttgtcaattgtgtgattttgca 27096346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 152 - 212
Target Start/End: Original strand, 27181898 - 27181957
Alignment:
Q  152 taaaaagataggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgca 212  Q
    ||||||||  ||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  27181898 taaaaagaatggtttaattgcacttttcccc-ctatcttttgtcaattgtgtgattttgca 27181957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 239
Target Start/End: Original strand, 37971958 - 37972037
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||| ||||||||||||||| ||||| |  |||| |||||||||||||||||||| |||  ||||||||||| |||||||    
T  37971958 taggcttaattgcacttttctcccctgtagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttg 37972037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 3687356 - 3687406
Alignment:
Q  165 ttaattgcacttttcccc-cctatcttttgtcaattgtgcgattttgcacc 214  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  3687356 ttaattgcacttttccccccctatcttttgttaattgtgcgattttgcacc 3687406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 13741560 - 13741634
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||| |||||||||||||  |||  |||||||||||||||||||| |||  ||||||||||| |||||||    
T  13741560 ttaattgcatttttcccccctatagtttaccaattgtgcgattttgcaccccatagttttaaacgagcgattttg 13741634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 29292925 - 29292999
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||||||||||||||||||||||  |||| |||||||||||||||||| | |||  ||| ||||||| |||||||    
T  29292925 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcatcccattgtttaaaacgagcgattttg 29292999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 13772952 - 13772903
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    |||||||||||||||||||||||| ||||  |||||||||||||||||||    
T  13772952 ttaattgcacttttcccccctatcatttgctaattgtgcgattttgcacc 13772903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 224
Target Start/End: Complemental strand, 15567334 - 15567266
Alignment:
Q  153 aaaaagataggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgttttt 224  Q
    ||||| |||||||||||||||||||||||||||||||||||    | ||||||||||||||| ||| |||||    
T  15567334 aaaaatataggtttaattgcacttttcccccctatcttttg---ctagtgcgattttgcaccgcatattttt 15567266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 161 - 230
Target Start/End: Original strand, 36527383 - 36527451
Alignment:
Q  161 aggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacga 230  Q
    |||||||||||||||||| |||| |||  ||||||||||||||||||||||||| |||  ||||||||||    
T  36527383 aggtttaattgcactttttcccc-tatagtttgtcaattgtgcgattttgcaccccatagttttaaacga 36527451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 160 - 239
Target Start/End: Original strand, 9034865 - 9034945
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgca-cctcatgtttttaaacgagtgattttg 239  Q
    |||| |||||||||||||||||||||||  |||| ||||||||||||| |||| || |||  ||||||||||| |||||||    
T  9034865 taggcttaattgcacttttcccccctataatttgccaattgtgcgattctgcacccccatagttttaaacgagcgattttg 9034945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 160 - 223
Target Start/End: Original strand, 13772639 - 13772702
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttt 223  Q
    |||| |||||||||||||||| ||||||||||||  ||||||| ||||||||||| ||| ||||    
T  13772639 taggcttaattgcacttttcctccctatcttttgctaattgtgtgattttgcaccccatctttt 13772702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 160 - 239
Target Start/End: Complemental strand, 18864457 - 18864379
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||| ||||||| ||||||||||| |||  |||| ||||||||||||||||||||||||  ||||||| ||| |||||||    
T  18864457 taggcttaattgtacttttccccc-tatagtttgccaattgtgcgattttgcacctcatagttttaaaagagcgattttg 18864379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 5349781 - 5349724
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgttttta 225  Q
    |||||||||||||   |||||||||||||| ||||||||||||||||||| ||| ||||||    
T  5349781 ttaattgcacttt---cccctatcttttgttaattgtgcgattttgcaccccatcttttta 5349724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 210
Target Start/End: Complemental strand, 5735599 - 5735553
Alignment:
Q  164 tttaattgcacttttcccccctatcttttgtcaattgtgcgattttg 210  Q
    ||||||||||||||| ||||||||||||| | |||||||||||||||    
T  5735599 tttaattgcactttttccccctatcttttattaattgtgcgattttg 5735553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 214
Target Start/End: Original strand, 6908211 - 6908264
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    |||| ||||||||||||||||||| ||||| |||| |||||||||||||||||||    
T  6908211 taggcttaattgcacttttccccc-tatctattgttaattgtgcgattttgcacc 6908264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 210
Target Start/End: Complemental strand, 23686773 - 23686723
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttg 210  Q
    |||| |||||||||||||| ||||||||||||||  |||||||||||||||    
T  23686773 taggcttaattgcactttttccccctatcttttgctaattgtgcgattttg 23686723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 29293397 - 29293323
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||| |||||||||||||  |||| |||||||||||||||||||  |||  ||| ||||||| |||||||    
T  29293397 ttaattgcatttttcccccctatagtttgccaattgtgcgattttgcactccattgtttaaaacgagcgattttg 29293323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 231
Target Start/End: Original strand, 3204662 - 3204736
Alignment:
Q  155 aaagataggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgag 231  Q
    |||||| || |||||||||||||  ||||||||  |||| |||||||||||||||||||| |||  |||||||||||    
T  3204662 aaagattggcttaattgcacttt--ccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgag 3204736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 153 - 214
Target Start/End: Complemental strand, 6908546 - 6908486
Alignment:
Q  153 aaaaagataggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    ||||| ||| ||||||||||||||| ||||||||| |||||  |||||||||||||||||||    
T  6908546 aaaaaaatatgtttaattgcacttt-cccccctattttttgctaattgtgcgattttgcacc 6908486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 8953939 - 8953891
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    ||||||||||||||||||| |||||||||| |||||||| ||||||||||    
T  8953939 ttaattgcacttttccccc-tatcttttgttaattgtgcaattttgcacc 8953891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 42419085 - 42419005
Alignment:
Q  159 ataggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgca-cctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||||||||||| |||||||  |||| |||||||||| ||||||| || |||  ||||||||||| |||||||    
T  42419085 ataggtttaattgcacttttc-cccctatagtttgccaattgtgcgtttttgcacccccatagttttaaacgagcgattttg 42419005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 213
Target Start/End: Original strand, 5735255 - 5735303
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcac 213  Q
    ||||||||||||||| ||||||||||| |  ||||||||||||||||||    
T  5735255 ttaattgcacttttctcccctatctttggctaattgtgcgattttgcac 5735303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 153 - 212
Target Start/End: Original strand, 38191253 - 38191312
Alignment:
Q  153 aaaaagataggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgca 212  Q
    ||||||| |||||||||||||||||||| |  |||||||||  |||| ||||||||||||    
T  38191253 aaaaagaaaggtttaattgcacttttcctctttatcttttgctaattatgcgattttgca 38191312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 215
Target Start/End: Original strand, 18925065 - 18925115
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacct 215  Q
    |||||||||||||||  ||||||||||||  |||||||| |||||||||||    
T  18925065 ttaattgcacttttcttccctatcttttgctaattgtgcaattttgcacct 18925115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 213
Target Start/End: Original strand, 8953601 - 8953651
Alignment:
Q  161 aggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcac 213  Q
    |||||||||||||||||  ||||| |||||||| ||||| |||||||||||||    
T  8953601 aggtttaattgcacttt--cccccgatcttttgacaattatgcgattttgcac 8953651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 18925280 - 18925231
Alignment:
Q  166 taattgcacttttcccccctatctttt-gtcaattgtgcgattttgcacc 214  Q
    |||||| |||||| ||||||||||||| | ||||||||||||||||||||    
T  18925280 taattgaacttttgccccctatctttttgccaattgtgcgattttgcacc 18925231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 212
Target Start/End: Original strand, 27096167 - 27096216
Alignment:
Q  164 tttaattgcacttttcccccctatc-ttttgtcaattgtgcgattttgca 212  Q
    ||||||||||||||| ||||||||| ||||  ||||||||||||||||||    
T  27096167 tttaattgcacttttgccccctatctttttaccaattgtgcgattttgca 27096216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 212
Target Start/End: Complemental strand, 27182136 - 27182087
Alignment:
Q  164 tttaattgcacttttcccccctatc-ttttgtcaattgtgcgattttgca 212  Q
    ||||||||||||||| ||||||||| ||||  ||||||||||||||||||    
T  27182136 tttaattgcacttttgccccctatctttttaccaattgtgcgattttgca 27182087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 29291809 - 29291858
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    |||||||||||||| | ||||||||||||  |||| ||||||||||||||    
T  29291809 ttaattgcactttttctccctatcttttgataattatgcgattttgcacc 29291858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 30857955 - 30857906
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    ||||||||||||||  | | ||||||||||||||||||| ||||||||||    
T  30857955 ttaattgcacttttgtctcttatcttttgtcaattgtgcaattttgcacc 30857906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 38191616 - 38191567
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    ||||||||| ||||  |||||||||||||| |||| ||||||||||||||    
T  38191616 ttaattgcattttttacccctatcttttgttaattatgcgattttgcacc 38191567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 39983702 - 39983751
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    ||||||||||||||||||| |||||||| | |||| |||||||| |||||    
T  39983702 ttaattgcacttttcccccttatcttttattaattatgcgatttcgcacc 39983751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 163 - 214
Target Start/End: Original strand, 5735376 - 5735428
Alignment:
Q  163 gtttaattgcacttttcccccctatctttt-gtcaattgtgcgattttgcacc 214  Q
    ||||| |||||||||| | ||||||||||| | ||||||||||||||||||||    
T  5735376 gtttatttgcactttttctccctatctttttgccaattgtgcgattttgcacc 5735428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 223
Target Start/End: Complemental strand, 33628709 - 33628653
Alignment:
Q  167 aattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttt 223  Q
    |||||||||||| ||| |||||||||   ||||||||||||||||||| ||| ||||    
T  33628709 aattgcactttttccctctatcttttactaattgtgcgattttgcaccccatctttt 33628653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 163 - 214
Target Start/End: Complemental strand, 34235909 - 34235857
Alignment:
Q  163 gtttaattgcacttttcccccctatcttttgtc-aattgtgcgattttgcacc 214  Q
    |||||||||||||||| ||||||||||||| || |||||| |||||| |||||    
T  34235909 gtttaattgcacttttgccccctatcttttttcaaattgttcgatttcgcacc 34235857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 224
Target Start/End: Complemental strand, 35080259 - 35080215
Alignment:
Q  180 ccccctatcttttgtcaattgtgcgattttgcacctcatgttttt 224  Q
    |||| |||||||||| ||||||||||||||||||| ||| |||||    
T  35080259 ccccttatcttttgttaattgtgcgattttgcaccccatcttttt 35080215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 6846 - 6772
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||| ||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||| |||||||    
T  6846 ttaattgcatttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttg 6772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 6155 - 6229
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||||| || ||||||||||  |||||||||||||| |||| ||| |||||||| ||| |||||||    
T  6155 ttaattgcacttttcacctctatcttttgctaattgtgcgattttacaccccatatttttaaatgagcgattttg 6229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 47; Significance: 8e-18; HSPs: 2)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 333 - 407
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||| | |||  ||||||||||| |||||||    
T  333 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcatcccatagttttaaacgagcgattttg 407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 813 - 740
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||||||||||||| |||| |||  |||| |||||||||||||||||||| |||  ||||||||||| |||||||    
T  813 ttaattgcactttttcccc-tatagtttgccaattgtgcgattttgcaccccataattttaaacgagcgattttg 740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 185325 - 185251
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||||||||||||||| ||||||  |||| |||||||||||||||||||| |||  ||||||||||| |||||||    
T  185325 ttaattgcacttttcctccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttg 185251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 184842 - 184916
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||||||||| || ||||  |||||||| ||||| |||||||||| |||  ||||||||||| |||||||    
T  184842 ttaattgcacttttctcctctatagtttgtcaactgtgcaattttgcaccccatagttttaaacgagcgattttg 184916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 2)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 1121 - 1170
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  1121 ttaattgcactttttccccctatcttttgttaattgtgcgattttgcacc 1170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 1471 - 1422
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  1471 ttaattgcactttttccccctatcttttgccaattgtgcgattttgcacc 1422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 2)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 6397 - 6446
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||    
T  6397 ttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacc 6446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 6747 - 6699
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    ||||||||||||||||||| |||||||||  |||||||||||||||||||    
T  6747 ttaattgcacttttccccc-tatcttttgctaattgtgcgattttgcacc 6699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 25420 - 25371
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||    
T  25420 ttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacc 25371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 5)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 438933 - 438982
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||    
T  438933 ttaattgcacttttcccccctatcttttgctaattgtgcgattttgcacc 438982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 162 - 214
Target Start/End: Original strand, 183364 - 183415
Alignment:
Q  162 ggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  183364 ggtttaattgcacttttcccc-ctatcttttgtcaattgtacgattttgcacc 183415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 439255 - 439203
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgca 212  Q
    |||| |||||||||||||| |||| |||||||||  |||||||||||||||||    
T  439255 taggcttaattgcactttttccccttatcttttgctaattgtgcgattttgca 439203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 165 - 208
Target Start/End: Complemental strand, 183713 - 183670
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattt 208  Q
    ||||||||||||||||||||||| |||||  |||||||||||||    
T  183713 ttaattgcacttttcccccctatattttgctaattgtgcgattt 183670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 212
Target Start/End: Complemental strand, 183594 - 183544
Alignment:
Q  163 gtttaattgcacttttcccccctatc-ttttgtcaattgtgcgattttgca 212  Q
    |||||||||||||||| ||||||||| ||||  ||||||||||||||||||    
T  183594 gtttaattgcacttttgccccctatctttttaccaattgtgcgattttgca 183544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 165 - 216
Target Start/End: Original strand, 6610 - 6661
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctc 216  Q
    ||||||||||| |||||||||||||||||| ||||||| |||||||||||||    
T  6610 ttaattgcactgttcccccctatcttttgttaattgtgtgattttgcacctc 6661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 6925 - 6878
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    ||||||||||||| ||||||||||||||| ||||||||| ||||||||||    
T  6925 ttaattgcacttt-cccccctatcttttgccaattgtgc-attttgcacc 6878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1221 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold1221
Description:

Target: scaffold1221; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 162 - 216
Target Start/End: Complemental strand, 1837 - 1784
Alignment:
Q  162 ggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctc 216  Q
    |||||||||||||||||||||| ||||||||||  ||||||||||||||||||||    
T  1837 ggtttaattgcacttttccccc-tatcttttgtttattgtgcgattttgcacctc 1784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 45862 - 45809
Alignment:
Q  160 taggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    |||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  45862 taggcttaattgcacttttccccc-tatcttttgccaattgtgcgattttgcacc 45809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 165 - 213
Target Start/End: Original strand, 45540 - 45587
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcac 213  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  45540 ttaattgcacttttcccc-ctatcttttgttaattgtgcgattttgcac 45587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 228
Target Start/End: Complemental strand, 20100 - 20031
Alignment:
Q  159 ataggtttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaac 228  Q
    ||||| ||||||||||||||||||| |||  |||||||||||||||||||||| || |||  ||||||||    
T  20100 ataggcttaattgcacttttcccccttatagtttgtcaattgtgcgattttgccccccatagttttaaac 20031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 19624 - 19697
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    ||||||||| ||||||||  |||  |||| |||||||||||||||||||| |||  ||||||||||| |||||||    
T  19624 ttaattgcaattttcccca-tatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttg 19697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 411926 - 411974
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    ||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  411926 ttaattgcactttacccc-ctatcttttgtcaattgtgcgattttgcacc 411974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0535 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 165 - 212
Target Start/End: Original strand, 10015 - 10062
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgca 212  Q
    |||||||||||||| |||||||||||||| ||||||| ||||||||||    
T  10015 ttaattgcacttttgccccctatcttttgccaattgtacgattttgca 10062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 50078 - 50150
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||||||||||||  ||||||||  |||||||||||||| |||||||||| |||  ||||||||||| |||||||    
T  50078 ttaattgcacttt--ccccctatagtttgtcaattgtgcaattttgcaccccatagttttaaacgagcgattttg 50150  T

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Target: scaffold0069; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 50557 - 50509
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    ||||||||||||||||||| |||  |||| ||||||||||||||||||||    
T  50557 ttaattgcacttttccccc-tatagtttgccaattgtgcgattttgcacc 50509  T

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Target: scaffold0041 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 38746 - 38672
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacctcatgtttttaaacgagtgattttg 239  Q
    |||||||||||||| ||||||||  |||| |||||||||||||||||||| |||  | ||||||||  |||||||    
T  38746 ttaattgcactttttccccctatagtttgccaattgtgcgattttgcaccccatagtcttaaacgaacgattttg 38672  T

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Target: scaffold0035 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 214
Target Start/End: Original strand, 73087 - 73139
Alignment:
Q  163 gtttaattgcacttttcccccctatc-ttttgtcaattgtgcgattttgcacc 214  Q
    ||||||||||||||||  |||||||| ||||||||| ||||||||||||||||    
T  73087 gtttaattgcacttttgtcccctatctttttgtcaactgtgcgattttgcacc 73139  T

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Target: scaffold0029 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 165 - 239
Target Start/End: Original strand, 9908 - 9983
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgca-cctcatgtttttaaacgagtgattttg 239  Q
    |||||||||||||| ||||||||  |||| ||||||||||||||| || || |||  ||||||||||| |||||||    
T  9908 ttaattgcactttttccccctatagtttgccaattgtgcgatttttcacccccatagttttaaacgagcgattttg 9983  T

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Target: scaffold0015 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 17206 - 17158
Alignment:
Q  165 ttaattgcacttttcccccctatcttttgtcaattgtgcgattttgcacc 214  Q
    ||||||||||||||||||| |||||||||  |||||||| ||||||||||    
T  17206 ttaattgcacttttccccc-tatcttttgctaattgtgcaattttgcacc 17158  T

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