View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15453_low_24 (Length: 262)

Name: NF15453_low_24
Description: NF15453
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15453_low_24
NF15453_low_24
[»] chr8 (40 HSPs)
chr8 (16-261)||(39435248-39435497)
chr8 (50-178)||(70523-70651)
chr8 (50-178)||(6602518-6602646)
chr8 (50-178)||(6677971-6678099)
chr8 (49-178)||(35779497-35779626)
chr8 (50-178)||(1340-1468)
chr8 (54-178)||(39303313-39303438)
chr8 (50-178)||(31695269-31695397)
chr8 (50-178)||(32333114-32333242)
chr8 (50-178)||(42192639-42192767)
chr8 (50-178)||(1078648-1078776)
chr8 (50-178)||(4530982-4531110)
chr8 (50-178)||(28817256-28817384)
chr8 (50-178)||(7792661-7792789)
chr8 (50-148)||(18386708-18386806)
chr8 (68-178)||(42885192-42885302)
chr8 (50-178)||(3822396-3822524)
chr8 (49-177)||(40911220-40911347)
chr8 (50-178)||(45264640-45264767)
chr8 (50-175)||(7813322-7813447)
chr8 (66-177)||(41849233-41849343)
chr8 (49-178)||(12534720-12534847)
chr8 (48-178)||(31969720-31969850)
chr8 (50-178)||(10963242-10963368)
chr8 (49-177)||(9292017-9292145)
chr8 (50-178)||(29425357-29425479)
chr8 (50-178)||(6099572-6099700)
chr8 (54-177)||(18752345-18752468)
chr8 (104-178)||(9775042-9775116)
chr8 (61-178)||(14400726-14400843)
chr8 (78-175)||(31532128-31532225)
chr8 (66-177)||(7403696-7403806)
chr8 (74-152)||(5385362-5385440)
chr8 (50-136)||(22979604-22979690)
chr8 (110-178)||(13891150-13891218)
chr8 (49-152)||(41753006-41753109)
chr8 (110-178)||(33731464-33731532)
chr8 (50-178)||(42364702-42364829)
chr8 (89-178)||(2907054-2907142)
chr8 (68-175)||(40932727-40932834)
[»] chr3 (42 HSPs)
chr3 (45-178)||(43247650-43247783)
chr3 (50-178)||(54158266-54158394)
chr3 (48-178)||(42392805-42392935)
chr3 (50-178)||(7824454-7824582)
chr3 (50-178)||(29689482-29689610)
chr3 (50-178)||(51665925-51666053)
chr3 (50-178)||(54151681-54151809)
chr3 (48-178)||(4601423-4601553)
chr3 (50-172)||(55018040-55018162)
chr3 (49-177)||(35461480-35461608)
chr3 (62-178)||(36228994-36229110)
chr3 (47-178)||(52500835-52500966)
chr3 (66-175)||(9349679-9349788)
chr3 (50-178)||(28844504-28844633)
chr3 (66-178)||(475281-475392)
chr3 (62-178)||(3112995-3113111)
chr3 (50-178)||(41377584-41377707)
chr3 (50-178)||(33334608-33334736)
chr3 (77-177)||(38257304-38257404)
chr3 (50-177)||(40756728-40756856)
chr3 (50-178)||(43775223-43775351)
chr3 (50-175)||(7958569-7958694)
chr3 (49-178)||(50729523-50729652)
chr3 (49-178)||(50783197-50783326)
chr3 (62-169)||(448884-448991)
chr3 (51-178)||(51054702-51054829)
chr3 (54-178)||(55320400-55320523)
chr3 (50-176)||(1778851-1778977)
chr3 (50-178)||(29750621-29750748)
chr3 (50-178)||(47635005-47635133)
chr3 (51-178)||(2590810-2590928)
chr3 (48-152)||(23939177-23939281)
chr3 (54-121)||(51112521-51112588)
chr3 (49-178)||(8137633-8137760)
chr3 (53-178)||(31305744-31305868)
chr3 (49-178)||(32001424-32001553)
chr3 (109-162)||(43023694-43023747)
chr3 (50-178)||(28458663-28458790)
chr3 (83-152)||(8151381-8151450)
chr3 (51-118)||(28731847-28731915)
chr3 (54-121)||(47410809-47410877)
chr3 (54-102)||(47770329-47770377)
[»] chr4 (53 HSPs)
chr4 (50-178)||(1173951-1174079)
chr4 (50-178)||(43139906-43140034)
chr4 (49-178)||(34739279-34739408)
chr4 (50-178)||(53457824-53457952)
chr4 (49-178)||(26424858-26424986)
chr4 (50-178)||(18257329-18257457)
chr4 (49-178)||(19849503-19849632)
chr4 (50-178)||(45874055-45874183)
chr4 (50-178)||(238458-238586)
chr4 (50-178)||(28798388-28798516)
chr4 (50-178)||(54768432-54768560)
chr4 (50-178)||(12867841-12867969)
chr4 (52-178)||(19225261-19225387)
chr4 (53-178)||(22607988-22608113)
chr4 (61-178)||(23417483-23417600)
chr4 (50-178)||(12735431-12735559)
chr4 (54-178)||(29581044-29581167)
chr4 (49-177)||(55214651-55214779)
chr4 (50-177)||(12767087-12767214)
chr4 (65-152)||(2075521-2075607)
chr4 (50-178)||(11277982-11278106)
chr4 (49-143)||(32441119-32441213)
chr4 (49-178)||(55400227-55400356)
chr4 (50-178)||(19673929-19674057)
chr4 (50-174)||(23710337-23710461)
chr4 (82-178)||(33770600-33770696)
chr4 (50-152)||(37134048-37134150)
chr4 (53-174)||(19814108-19814229)
chr4 (50-178)||(31014982-31015110)
chr4 (111-178)||(1966611-1966678)
chr4 (63-178)||(52171990-52172105)
chr4 (49-178)||(51287600-51287730)
chr4 (64-152)||(22910283-22910371)
chr4 (64-152)||(22968151-22968239)
chr4 (50-178)||(50347329-50347457)
chr4 (51-177)||(516457-516583)
chr4 (50-152)||(2864774-2864876)
chr4 (112-169)||(39807906-39807963)
chr4 (71-164)||(49030753-49030845)
chr4 (53-178)||(52768301-52768425)
chr4 (53-140)||(3465755-3465842)
chr4 (61-152)||(37395635-37395726)
chr4 (66-140)||(32778141-32778215)
chr4 (109-178)||(37620676-37620745)
chr4 (51-102)||(40292691-40292742)
chr4 (51-147)||(46194249-46194346)
chr4 (110-178)||(24417878-24417946)
chr4 (67-177)||(2804539-2804647)
chr4 (120-175)||(23532117-23532172)
chr4 (125-178)||(16555382-16555435)
chr4 (50-107)||(19119144-19119201)
chr4 (65-177)||(1125902-1126014)
chr4 (123-163)||(31751837-31751876)
[»] chr1 (40 HSPs)
chr1 (49-178)||(32007073-32007202)
chr1 (49-178)||(5055788-5055917)
chr1 (50-178)||(41808202-41808330)
chr1 (48-178)||(29994383-29994513)
chr1 (49-178)||(28455873-28456002)
chr1 (50-178)||(45813011-45813139)
chr1 (50-178)||(48660022-48660150)
chr1 (50-178)||(49783707-49783835)
chr1 (49-178)||(20747-20876)
chr1 (49-178)||(192414-192543)
chr1 (50-178)||(41761411-41761539)
chr1 (61-178)||(39276361-39276478)
chr1 (74-178)||(7059491-7059595)
chr1 (51-177)||(35945798-35945924)
chr1 (49-178)||(13109769-13109898)
chr1 (53-142)||(29587255-29587344)
chr1 (50-175)||(39284290-39284415)
chr1 (51-178)||(5943682-5943809)
chr1 (65-175)||(7275696-7275806)
chr1 (52-177)||(21938944-21939069)
chr1 (50-151)||(46447404-46447505)
chr1 (110-178)||(41039303-41039371)
chr1 (50-175)||(2088908-2089033)
chr1 (62-148)||(16770186-16770272)
chr1 (53-178)||(778578-778702)
chr1 (50-178)||(26032798-26032929)
chr1 (97-178)||(35110099-35110180)
chr1 (66-140)||(35224356-35224430)
chr1 (62-136)||(47111469-47111543)
chr1 (85-178)||(13097339-13097432)
chr1 (110-174)||(50106200-50106264)
chr1 (75-152)||(3716636-3716713)
chr1 (50-178)||(4065961-4066089)
chr1 (112-178)||(3716424-3716490)
chr1 (74-152)||(38817225-38817303)
chr1 (128-177)||(32982351-32982400)
chr1 (83-175)||(13183179-13183271)
chr1 (125-177)||(26264537-26264589)
chr1 (56-121)||(44836175-44836242)
chr1 (50-106)||(45294658-45294714)
[»] scaffold1348 (1 HSPs)
scaffold1348 (50-178)||(862-990)
[»] chr7 (55 HSPs)
chr7 (50-178)||(25112247-25112375)
chr7 (49-178)||(11355822-11355951)
chr7 (50-178)||(4106738-4106866)
chr7 (50-178)||(31770532-31770660)
chr7 (50-175)||(44083940-44084065)
chr7 (50-178)||(25546275-25546403)
chr7 (49-178)||(40058237-40058366)
chr7 (50-178)||(23358185-23358313)
chr7 (65-178)||(4107324-4107437)
chr7 (61-178)||(29484755-29484872)
chr7 (51-178)||(47250251-47250378)
chr7 (53-178)||(8439081-8439206)
chr7 (56-171)||(27229484-27229600)
chr7 (54-177)||(43753754-43753878)
chr7 (50-178)||(47557781-47557909)
chr7 (50-152)||(46427360-46427462)
chr7 (50-178)||(2146636-2146764)
chr7 (50-174)||(38033729-38033853)
chr7 (83-178)||(47570718-47570813)
chr7 (49-151)||(29255716-29255817)
chr7 (50-178)||(10220473-10220600)
chr7 (51-178)||(48146754-48146881)
chr7 (60-178)||(5587290-5587408)
chr7 (60-178)||(5592251-5592369)
chr7 (50-152)||(47960981-47961083)
chr7 (50-178)||(48444152-48444280)
chr7 (68-178)||(41183833-41183943)
chr7 (50-178)||(7162790-7162916)
chr7 (65-178)||(28603026-28603139)
chr7 (113-178)||(38781208-38781273)
chr7 (50-178)||(5772819-5772947)
chr7 (51-178)||(42081619-42081743)
chr7 (83-178)||(39513983-39514078)
chr7 (49-175)||(15634882-15635008)
chr7 (64-178)||(31288224-31288338)
chr7 (50-168)||(34763454-34763560)
chr7 (50-178)||(32606330-32606458)
chr7 (50-173)||(18506281-18506403)
chr7 (49-148)||(43203305-43203404)
chr7 (50-163)||(25049973-25050086)
chr7 (49-178)||(25872762-25872891)
chr7 (50-178)||(27915580-27915709)
chr7 (53-178)||(35309854-35309982)
chr7 (67-178)||(4001844-4001953)
chr7 (128-178)||(19630668-19630718)
chr7 (49-178)||(40657525-40657657)
chr7 (49-178)||(7298125-7298254)
chr7 (51-175)||(23036208-23036330)
chr7 (53-178)||(35577876-35578001)
chr7 (50-102)||(25504007-25504059)
chr7 (65-163)||(13887186-13887282)
chr7 (50-152)||(5462976-5463078)
chr7 (50-99)||(27737949-27737998)
chr7 (68-104)||(3838626-3838662)
chr7 (53-149)||(34038491-34038587)
[»] chr6 (27 HSPs)
chr6 (50-178)||(33621494-33621622)
chr6 (49-178)||(4464126-4464255)
chr6 (50-178)||(33704216-33704344)
chr6 (48-178)||(28322930-28323060)
chr6 (43-178)||(21000685-21000820)
chr6 (49-178)||(21037290-21037418)
chr6 (50-178)||(361011-361139)
chr6 (50-178)||(2959149-2959277)
chr6 (49-178)||(24619079-24619208)
chr6 (49-178)||(35218640-35218757)
chr6 (49-154)||(11572007-11572112)
chr6 (75-178)||(16518448-16518549)
chr6 (116-178)||(19145536-19145598)
chr6 (113-178)||(29009650-29009715)
chr6 (50-177)||(12252023-12252150)
chr6 (49-140)||(33255488-33255578)
chr6 (49-148)||(3057401-3057496)
chr6 (50-130)||(10226540-10226620)
chr6 (49-140)||(4610863-4610953)
chr6 (110-149)||(17590391-17590430)
chr6 (65-147)||(31963765-31963847)
chr6 (62-107)||(5598846-5598891)
chr6 (54-135)||(7197849-7197930)
chr6 (113-178)||(22576244-22576309)
chr6 (54-148)||(735448-735543)
chr6 (198-246)||(18672105-18672153)
chr6 (54-121)||(21513075-21513143)
[»] chr5 (26 HSPs)
chr5 (50-178)||(35317697-35317825)
chr5 (50-175)||(1191543-1191668)
chr5 (50-178)||(13203957-13204085)
chr5 (50-178)||(21018223-21018351)
chr5 (51-178)||(4824939-4825066)
chr5 (49-178)||(12257355-12257484)
chr5 (50-178)||(2970984-2971112)
chr5 (50-178)||(11124652-11124780)
chr5 (50-169)||(27721431-27721550)
chr5 (83-178)||(31909385-31909480)
chr5 (50-152)||(9576987-9577089)
chr5 (48-178)||(29265873-29266003)
chr5 (51-175)||(17984745-17984869)
chr5 (53-175)||(6020995-6021117)
chr5 (54-178)||(8734000-8734125)
chr5 (50-175)||(40177624-40177749)
chr5 (50-178)||(21112049-21112177)
chr5 (50-178)||(35545933-35546061)
chr5 (50-178)||(2786271-2786398)
chr5 (49-178)||(32143414-32143531)
chr5 (50-177)||(3386894-3387028)
chr5 (112-178)||(23262606-23262672)
chr5 (128-178)||(19181789-19181838)
chr5 (48-178)||(28591350-28591480)
chr5 (60-96)||(4842494-4842530)
chr5 (111-175)||(41580078-41580142)
[»] chr2 (47 HSPs)
chr2 (50-178)||(10639606-10639734)
chr2 (50-178)||(33083554-33083682)
chr2 (50-178)||(11459715-11459843)
chr2 (48-178)||(19048752-19048882)
chr2 (48-178)||(23839857-23839987)
chr2 (54-178)||(11816550-11816675)
chr2 (50-178)||(26605624-26605752)
chr2 (48-178)||(39831444-39831573)
chr2 (50-178)||(19537307-19537435)
chr2 (62-178)||(37197610-37197726)
chr2 (50-178)||(39535534-39535662)
chr2 (50-178)||(45125165-45125293)
chr2 (50-178)||(34460369-34460497)
chr2 (50-175)||(11708678-11708803)
chr2 (50-178)||(4851320-4851448)
chr2 (50-178)||(29659218-29659346)
chr2 (50-178)||(42578180-42578296)
chr2 (53-175)||(4800879-4801001)
chr2 (50-178)||(7275886-7276015)
chr2 (50-178)||(34234530-34234656)
chr2 (54-175)||(43684073-43684194)
chr2 (50-178)||(19816220-19816348)
chr2 (50-178)||(27137918-27138045)
chr2 (56-178)||(21312211-21312331)
chr2 (50-176)||(15782590-15782715)
chr2 (49-147)||(45201903-45202001)
chr2 (53-178)||(38440197-38440322)
chr2 (54-178)||(42025674-42025799)
chr2 (49-152)||(9815824-9815925)
chr2 (52-163)||(6055020-6055131)
chr2 (53-148)||(16654366-16654461)
chr2 (49-175)||(7349097-7349223)
chr2 (109-178)||(33001761-33001830)
chr2 (50-178)||(44181887-44182015)
chr2 (53-176)||(20497592-20497715)
chr2 (54-129)||(25501832-25501907)
chr2 (53-175)||(34093240-34093363)
chr2 (49-152)||(40786235-40786338)
chr2 (56-106)||(8311335-8311385)
chr2 (53-107)||(32844648-32844702)
chr2 (62-175)||(40825161-40825274)
chr2 (109-178)||(43778468-43778537)
chr2 (54-121)||(23957055-23957123)
chr2 (50-89)||(13106356-13106395)
chr2 (117-150)||(12366795-12366828)
chr2 (110-147)||(29726075-29726112)
chr2 (51-152)||(34239846-34239947)
[»] scaffold0032 (1 HSPs)
scaffold0032 (49-178)||(56480-56609)
[»] scaffold0038 (1 HSPs)
scaffold0038 (48-178)||(114250-114380)
[»] scaffold0119 (2 HSPs)
scaffold0119 (50-178)||(13951-14079)
scaffold0119 (50-178)||(19631-19759)
[»] scaffold0044 (1 HSPs)
scaffold0044 (50-178)||(9973-10101)
[»] scaffold0067 (1 HSPs)
scaffold0067 (49-178)||(34817-34947)
[»] scaffold0352 (1 HSPs)
scaffold0352 (49-178)||(8943-9072)
[»] scaffold0053 (1 HSPs)
scaffold0053 (61-178)||(22174-22291)
[»] scaffold0360 (1 HSPs)
scaffold0360 (49-133)||(14494-14578)
[»] scaffold0495 (1 HSPs)
scaffold0495 (50-130)||(3259-3339)
[»] scaffold0002 (1 HSPs)
scaffold0002 (55-121)||(411652-411719)


Alignment Details
Target: chr8 (Bit Score: 166; Significance: 6e-89; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 16 - 261
Target Start/End: Original strand, 39435248 - 39435497
Alignment:
Q  16 gaaacaaaagcatgaaaagaaataactattagcagtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttc 115  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  39435248 gaaacaaaagcatgaaaagaaataactattagccgtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatctgggttc 39435347  T
Q  116 gaacccgggacctcacagttgtgtgtgagtttaatttatgtggattacgacttcatctaagac----nnnnnnnnnnnnnnnnnttattagcctatgtcc 211  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||                      |||||||||||||||    
T  39435348 gaacccgagacctcacagttgtgtgtgagtttaatttatgtggattacgacttcatctaagacaaaaaaaaaaaaaaaaaaaaactattagcctatgtcc 39435447  T
Q  212 agaaaggtgaacagactcaaccaccaaccatgataatgaaaggaagagaa 261  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39435448 agaaaggtgaacagactcaaccaccaaccatgataatgaaaggaagagaa 39435497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 50 - 178
Target Start/End: Complemental strand, 70651 - 70523
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||   ||||| |||||||||||||||||||||||||||||||||     
T  70651 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggtcggacgtcatgacccgggtttgaacccgggacctcacagttgtgtgtgagtttat 70552  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  ||||||||| ||||||||||||||    
T  70551 tttcagtggattaccacttcatctaagac 70523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 50 - 178
Target Start/End: Complemental strand, 6602646 - 6602518
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| ||||||||||||||||||| | ||||||||||| ||||||||||||   |||||||||||||||||||||||||||||||||||||||     
T  6602646 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttat 6602547  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  ||||||||| ||||||||||||||    
T  6602546 tttcagtggattaccacttcatctaagac 6602518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 50 - 178
Target Start/End: Complemental strand, 6678099 - 6677971
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| ||||||||||||||||||| | ||||||||||| ||||||||||||   |||||||||||||||||||||||||||||||||||||||     
T  6678099 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttat 6678000  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  ||||||||| ||||||||||||||    
T  6677999 tttcagtggattaccacttcatctaagac 6677971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 49 - 178
Target Start/End: Complemental strand, 35779626 - 35779497
Alignment:
Q  49 agtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagttta 148  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||| |||||||  |||   |||||||||||||||||||||||||||||||||||||||    
T  35779626 agtctagaagtcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacccgggttcgaacccgggacctcacagttgtgtgtgagttta 35779527  T
Q  149 atttatgtggattacgacttcatctaagac 178  Q
     |||  ||||||||| ||||||||||||||    
T  35779526 ttttcagtggattaccacttcatctaagac 35779497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 50 - 178
Target Start/End: Complemental strand, 1468 - 1340
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||||||||||||||||||||||| ||||||||||||| |||||||  |||    ||||||||||||||||||||||||||||||||||||||     
T  1468 gtctagaagttctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgaccctggttcgaacccgggacctcacagttgtgtgtgagtttat 1369  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  ||||||||| ||||||||||||||    
T  1368 tttcagtggattaccacttcatctaagac 1340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 54 - 178
Target Start/End: Original strand, 39303313 - 39303438
Alignment:
Q  54 agaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgag-tttaattt 152  Q
    |||||| ||||||||||||||||||| | ||||||||||| |||||||||||| ||||||| ||||||| ||||||||||||||||||||| ||||||||    
T  39303313 agaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacatgggtttgaacccgagacctcacagttgtgtgtgagttttaattt 39303412  T
Q  153 atgtggattacgacttcatctaagac 178  Q
      ||||||||| ||||||||||||||    
T  39303413 cagtggattaccacttcatctaagac 39303438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 50 - 178
Target Start/End: Complemental strand, 31695397 - 31695269
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||||||||||||||||||| |||||||||||||||||| ||| ||||||||  || |||||||| ||||||||||| ||||||||||||||||    
T  31695397 gtctagaagttctagctcaactggcacatgtcaaaattgcaaggttggatgtcatgattcggattcgaacctgggacctcacaattgtgtgtgagtttaa 31695298  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||   ||| |||| ||||||||||||||    
T  31695297 tttcaatggtttaccacttcatctaagac 31695269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 50 - 178
Target Start/End: Original strand, 32333114 - 32333242
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| ||||||||||||||||||| | ||||||||||| |||||||  |||   |||||||||||||||||||||||||||||||||||||||     
T  32333114 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacccgggacctcacagttgtgtgtgagtttat 32333213  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  ||||||||| ||||||||||||||    
T  32333214 tttcagtggattaccacttcatctaagac 32333242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 50 - 178
Target Start/End: Complemental strand, 42192767 - 42192639
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| ||||||||||||||||||| | ||||||||||| ||||||||||||   | |||||||||||||| ||||||||||||||||||||||     
T  42192767 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgagttcgaacccgggatctcacagttgtgtgtgagtttat 42192668  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  ||||||||| ||||||||||||||    
T  42192667 tttcagtggattaccacttcatctaagac 42192639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 50 - 178
Target Start/End: Complemental strand, 1078776 - 1078648
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    ||||||||||  |||||||||||| ||||| | ||||||||||| ||||||||||||    ||||||||||||||||||||||||||||||||||||||     
T  1078776 gtctagaagtcgtagctcaactggtaaatgccgaaattgcaaggccggacgtcatgacccaggttcgaacccgggacctcacagttgtgtgtgagtttat 1078677  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  ||||||||| ||||||||||||||    
T  1078676 tttcagtggattaccacttcatctaagac 1078648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 50 - 178
Target Start/End: Complemental strand, 4531110 - 4530982
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| ||||||||| ||||||||| | |||||||||||  |||||||||||   |||||||||||||||||||||||| |||||||||||||||    
T  4531110 gtctagaagtcctagctcaattggcaaatgccgaaattgcaaggctggacgtcatgacccgggttcgaacccgggacctcacagctgtgtgtgagtttaa 4531011  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  |||| |||| ||||||||||||||    
T  4531010 tttcagtggtttaccacttcatctaagac 4530982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 50 - 178
Target Start/End: Original strand, 28817256 - 28817384
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| ||||||||||||||||||| | ||||||||||| |||||||  |||   |||||||||||||||| ||||||||||||||||||||||     
T  28817256 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacccgggatctcacagttgtgtgtgagtttat 28817355  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  ||||||||| ||||||||||||||    
T  28817356 tttcagtggattaccacttcatctaagac 28817384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 50 - 178
Target Start/End: Original strand, 7792661 - 7792789
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| ||||||||||||||||||| | |||||||||||  ||||||  |||   |||||||||||||||| ||||||||||||||||||||||     
T  7792661 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggctggacgttgtgactcgggttcgaacccgggatctcacagttgtgtgtgagtttat 7792760  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  ||||||||| ||||||||||||||    
T  7792761 tttcagtggattactacttcatctaagac 7792789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 50 - 148
Target Start/End: Original strand, 18386708 - 18386806
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagttta 148  Q
    ||||||||||||||||||||||| ||||||   |||||||||||||||| |||||||   |||||||||||||||||||||||||||||||||||||||    
T  18386708 gtctagaagttctagctcaactgacaaatgctgaaattgcaaggtcggatgtcatgactcgggttcgaacccgggacctcacagttgtgtgtgagttta 18386806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 68 - 178
Target Start/End: Original strand, 42885192 - 42885302
Alignment:
Q  68 aactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaatttatgtggattacgact 167  Q
    |||||||||||| | ||||||||||| ||||||||||||   |||||||||||||||| |||||||||||||||||||||| |||  ||||||||| |||    
T  42885192 aactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggatctcacagttgtgtgtgagtttattttcagtggattaccact 42885291  T
Q  168 tcatctaagac 178  Q
    |||||||||||    
T  42885292 tcatctaagac 42885302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 50 - 178
Target Start/End: Original strand, 3822396 - 3822524
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    ||||||||||||||| |||||||||||||| | |||||| ||||||||||||  |||   |||||||||||| ||| |||||||||||||||||||||||    
T  3822396 gtctagaagttctagttcaactggcaaatgccgaaattgtaaggtcggacgttgtgacccgggttcgaacccaggatctcacagttgtgtgtgagtttaa 3822495  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  ||| ||||| ||||| ||||||||    
T  3822496 ttttagtgaattaccacttcttctaagac 3822524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 40911220 - 40911347
Alignment:
Q  49 agtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagttta 148  Q
    ||||||||||| ||||||||||||||||||| | ||||||||||| |||||||| |||   ||||||||| |||||||||||||  ||||||||||||||    
T  40911220 agtctagaagtgctagctcaactggcaaatgccgaaattgcaaggccggacgtcgtgacccgggttcgaa-ccgggacctcacaactgtgtgtgagttta 40911318  T
Q  149 atttatgtggattacgacttcatctaaga 177  Q
    ||||  |||| |||| |||||||||||||    
T  40911319 atttcagtggcttaccacttcatctaaga 40911347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 50 - 178
Target Start/End: Complemental strand, 45264767 - 45264640
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| ||| ||||||||||||||| | |||||||| ||||| ||||| |||   |||||||||||||||||||||||||| |||||||||||||    
T  45264767 gtctagaagtcctaactcaactggcaaatgccgaaattgca-ggtcgaacgtcgtgactcgggttcgaacccgggacctcacagttttgtgtgagtttaa 45264669  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  ||||||||| ||||| ||||||||    
T  45264668 tttcagtggattaccacttcctctaagac 45264640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 50 - 175
Target Start/End: Original strand, 7813322 - 7813447
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| |||||||||| ||||||||   ||||||||||| |||| ||  |||   |||||||||||||||||||||||||||||||||||||||     
T  7813322 gtctagaagtcctagctcaaccggcaaatgctgaaattgcaaggccggatgttgtgactcgggttcgaacccgggacctcacagttgtgtgtgagtttat 7813421  T
Q  150 tttatgtggattacgacttcatctaa 175  Q
    |||  ||||||||| |||||||||||    
T  7813422 tttcagtggattaccacttcatctaa 7813447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 66 - 177
Target Start/End: Complemental strand, 41849343 - 41849233
Alignment:
Q  66 tcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaatttatgtggattacga 165  Q
    |||||||||||||| | |||||||||||||||||||| |||| |||||||||| |||| ||||||| ||||||||||||||||||||  || |||||| |    
T  41849343 tcaactggcaaatgccgaaattgcaaggtcggacgtcgtgatctgggttcgaatccggaacctcactgttgtgtgtgagtttaatttcagt-gattacca 41849245  T
Q  166 cttcatctaaga 177  Q
     |||||||||||    
T  41849244 tttcatctaaga 41849233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 49 - 178
Target Start/End: Complemental strand, 12534847 - 12534720
Alignment:
Q  49 agtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagttta 148  Q
    ||||||||||| ||||||||||||||||||| | ||||||||||| |||||||| ||||  |||||||||||| ||| ||||||||  || |||||||||    
T  12534847 agtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcgtgatccgggttcgaacccaggatctcacagt--tgcgtgagttta 12534750  T
Q  149 atttatgtggattacgacttcatctaagac 178  Q
     |||  || |||||| ||||||||||||||    
T  12534749 ttttcagtagattaccacttcatctaagac 12534720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 48 - 178
Target Start/End: Complemental strand, 31969850 - 31969720
Alignment:
Q  48 cagtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagttt 147  Q
    ||||||||||||  ||||| || ||||||||| | ||||| ||||| | |||||||||||  |||||||||| |||||||||| |||||||||||| |||    
T  31969850 cagtctagaagtcatagcttaattggcaaatgccgaaatttcaaggccagacgtcatgatccgggttcgaacacgggacctcaaagttgtgtgtgaattt 31969751  T
Q  148 aatttatgtggattacgacttcatctaagac 178  Q
    |||||  |||| |||| ||||||||||||||    
T  31969750 aatttcagtggtttaccacttcatctaagac 31969720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 50 - 178
Target Start/End: Complemental strand, 10963368 - 10963242
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| ||||||||||||||||||| | ||||| ||||| || ||||  ||||   ||||||||||||||||||||||||||  ||||||||||     
T  10963368 gtctagaagtcctagctcaactggcaaatgccgaaattacaaggccgaacgttgtgatccaggttcgaacccgggacctcacagttg--tgtgagtttat 10963271  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  ||||||||| ||||||||||||||    
T  10963270 tttcagtggattaccacttcatctaagac 10963242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 9292017 - 9292145
Alignment:
Q  49 agtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagttta 148  Q
    ||||||||||| ||||||||||||||||||||| |||||| || | |||||||  |||   |  ||||||| |||||| |||||||||||||||||||||    
T  9292017 agtctagaagtcctagctcaactggcaaatgtcgaaattgtaaagccggacgttgtgacccgaattcgaactcgggacttcacagttgtgtgtgagttta 9292116  T
Q  149 atttatgtggattacgacttcatctaaga 177  Q
     |||  ||||||||| |||||||||||||    
T  9292117 ttttcagtggattaccacttcatctaaga 9292145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 50 - 178
Target Start/End: Original strand, 29425357 - 29425479
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| ||||||||| ||||||||| ||||||||||||| ||||||||||||   |||      ||||||| ||| || ||||||||||||||||    
T  29425357 gtctagaagtcctagctcaattggcaaatgccaaaattgcaaggccggacgtcatgacccggg------cccgggatctcgcaattgtgtgtgagtttaa 29425450  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  ||||||||| ||||||||||||||    
T  29425451 tttcagtggattaccacttcatctaagac 29425479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 50 - 178
Target Start/End: Original strand, 6099572 - 6099700
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| |||| |||||| ||||||||| ||||||||||| ||||||||||||   | |||||||||||  |||||||| ||| | |||||||||     
T  6099572 gtctagaagtcctagttcaacttgcaaatgtcgaaattgcaaggccggacgtcatgacccgagttcgaacccgaaacctcacaattgcgcgtgagtttag 6099671  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  |||| |||| ||||||||||||||    
T  6099672 ttttagtggtttaccacttcatctaagac 6099700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 54 - 177
Target Start/End: Original strand, 18752345 - 18752468
Alignment:
Q  54 agaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaattta 153  Q
    |||||| |||| ||||||| |||||  | |||||| ||||||||||||| ||||  |||||||||||||| |||| ||||||||||||| |||||||||     
T  18752345 agaagtcctagttcaactgacaaataccgaaattgtaaggtcggacgtcgtgatcggggttcgaacccggaaccttacagttgtgtgtgggtttaatttc 18752444  T
Q  154 tgtggattacgacttcatctaaga 177  Q
     |||||||   ||||||| |||||    
T  18752445 agtggattgacacttcatntaaga 18752468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 104 - 178
Target Start/End: Complemental strand, 9775116 - 9775042
Alignment:
Q  104 tgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaatttatgtggattacgacttcatctaagac 178  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||||||   |||||||| ||||||||||||||    
T  9775116 tgatctgggttcgaacccggaacctcacagttatgtgtgagtttaatttgaatggattacaacttcatctaagac 9775042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 61 - 178
Target Start/End: Original strand, 14400726 - 14400843
Alignment:
Q  61 ctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaatttatgtggat 160  Q
    |||||||||||| |||||    |||||||| ||||||||||| | |  ||| || ||||||||||||||||| ||||| |||||||||||| | |||| |    
T  14400726 ctagctcaactgacaaattctgaaattgcacggtcggacgtcgtaaactggatttgaacccgggacctcacaattgtgagtgagtttaattcaagtggtt 14400825  T
Q  161 tacgacttcatctaagac 178  Q
    ||| ||||||||||||||    
T  14400826 taccacttcatctaagac 14400843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 78 - 175
Target Start/End: Complemental strand, 31532225 - 31532128
Alignment:
Q  78 tgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaatttatgtggattacgacttcatctaa 175  Q
    |||| ||||||||||| |||||||  |||   || || ||||| |||||||||||||||||||||||||||||||  ||||||||| |||||||||||    
T  31532225 tgtcgaaattgcaaggccggacgttgtgacccggatttgaaccggggacctcacagttgtgtgtgagtttaatttcagtggattaccacttcatctaa 31532128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 66 - 177
Target Start/End: Complemental strand, 7403806 - 7403696
Alignment:
Q  66 tcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaatttatgtggattacga 165  Q
    ||||||| ||||||||||||||| ||||||||||||| |||   | ||||||| ||| ||| |||||||||| |||||| |||||||  || |||||| |    
T  7403806 tcaactgccaaatgtcaaaattgtaaggtcggacgtcgtgactcgagttcgaatccgagacatcacagttgtttgtgagcttaatttcagt-gattacca 7403708  T
Q  166 cttcatctaaga 177  Q
    ||||||||||||    
T  7403707 cttcatctaaga 7403696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 74 - 152
Target Start/End: Original strand, 5385362 - 5385440
Alignment:
Q  74 caaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaattt 152  Q
    |||||| | |||||||||||  ||||||| |||    ||||||||||||||||||||||||||||||||||||||||||    
T  5385362 caaatgccgaaattgcaaggctggacgtcgtgacccaggttcgaacccgggacctcacagttgtgtgtgagtttaattt 5385440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 136
Target Start/End: Original strand, 22979604 - 22979690
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttg 136  Q
    |||||||||| ||||||||||||||||||||| |||||||||| ||| ||||| ||||    |||| || |||||||||||||||||    
T  22979604 gtctagaagtcctagctcaactggcaaatgtcgaaattgcaagctcgaacgtcgtgatccaagttcaaagccgggacctcacagttg 22979690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 110 - 178
Target Start/End: Original strand, 13891150 - 13891218
Alignment:
Q  110 gggttcgaacccgggacctcacagttgtgtgtgagtttaatttatgtggattacgacttcatctaagac 178  Q
    |||||||||||  |||||||||||||||||||||||||| |||  |||| |||| ||||||||||||||    
T  13891150 gggttcgaacctaggacctcacagttgtgtgtgagtttattttcagtggtttaccacttcatctaagac 13891218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 152
Target Start/End: Complemental strand, 41753109 - 41753006
Alignment:
Q  49 agtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagttta 148  Q
    ||||||||||| |||||||||||| |||||||| ||||||||||  |||| ||| ||||  |  |||||||||   | ||||||||||||||| ||||||    
T  41753109 agtctagaagtcctagctcaactgacaaatgtcgaaattgcaagaccggatgtcgtgatccgaattcgaacccaaaatctcacagttgtgtgtaagttta 41753010  T
Q  149 attt 152  Q
    ||||    
T  41753009 attt 41753006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 110 - 178
Target Start/End: Complemental strand, 33731532 - 33731464
Alignment:
Q  110 gggttcgaacccgggacctcacagttgtgtgtgagtttaatttatgtggattacgacttcatctaagac 178  Q
    |||||| ||| ||||||||| ||||||||||||||||||||||  |||| |||| ||||| ||||||||    
T  33731532 gggttcaaactcgggacctcccagttgtgtgtgagtttaattttagtggtttaccacttcttctaagac 33731464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 50 - 178
Target Start/End: Complemental strand, 42364829 - 42364702
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| ||| |||||||| |||||| | ||||||||| | | ||||| ||||| |||||| ||| |||  |  ||||||||||||||||||||||    
T  42364829 gtctagaagtcctatctcaactgccaaatgccgaaattgcaaagccagacgttatgat-tgggtttgaatccgaaatttcacagttgtgtgtgagtttaa 42364731  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  || | |||| |||| |||||||||    
T  42364730 tttcagtagtttaccactttatctaagac 42364702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 178
Target Start/End: Original strand, 2907054 - 2907142
Alignment:
Q  89 caaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaattt-atgtggattacgacttcatctaagac 178  Q
    |||||||||||||| ||||  ||||| |||||||||||||||||||  | || ||||||||||| | ||||||||| ||||| ||||||||    
T  2907054 caaggtcggacgtcgtgatccgggtttgaacccgggacctcacagt--tatgggagtttaatttcaagtggattaccacttcgtctaagac 2907142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 175
Target Start/End: Original strand, 40932727 - 40932834
Alignment:
Q  68 aactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaatttatgtggattacgact 167  Q
    ||||| |||||||| |||||| ||| | ||||||| ||||  || |||||| |||  | ||||||||||||||||| ||||||||  || |||||| |||    
T  40932727 aactgacaaatgtcgaaattgtaagattggacgtcgtgatccggattcgaatccgaaatctcacagttgtgtgtgactttaattttagtagattaccact 40932826  T
Q  168 tcatctaa 175  Q
    ||||||||    
T  40932827 tcatctaa 40932834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 90; Significance: 1e-43; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 45 - 178
Target Start/End: Complemental strand, 43247783 - 43247650
Alignment:
Q  45 tagcagtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgag 144  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||  |||  ||||||||||||||||||||||||||||||||||||    
T  43247783 tagcagtctagaagtcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaacccgggacctcacagttgtgtgtgag 43247684  T
Q  145 tttaatttatgtggattacgacttcatctaagac 178  Q
    |||| |||  ||||||||| ||||||||||||||    
T  43247683 tttattttcagtggattaccacttcatctaagac 43247650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 50 - 178
Target Start/End: Original strand, 54158266 - 54158394
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| ||||||||||||||||||| | ||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||     
T  54158266 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgatccgggttcgaacccgggacctcacagttgtgtgtgagtttat 54158365  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  ||||||||| ||||||||||||||    
T  54158366 tttcagtggattaccacttcatctaagac 54158394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 48 - 178
Target Start/End: Complemental strand, 42392935 - 42392805
Alignment:
Q  48 cagtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagttt 147  Q
    |||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||  ||| ||||||||||||||||||| ||||||||||||||    
T  42392935 cagtctagaagtcctagctcaactggcaaatgccgaaattgcaaggtcggacgtcatgatccgggctcgaacccgggacctcacaattgtgtgtgagttt 42392836  T
Q  148 aatttatgtggattacgacttcatctaagac 178  Q
    |||||  |||| |||| ||||||||||||||    
T  42392835 aatttcagtggtttaccacttcatctaagac 42392805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 50 - 178
Target Start/End: Complemental strand, 7824582 - 7824454
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| ||||||||||||||||||| | ||||||||||| ||||||||||||   |||||||||||||||||||||||||||||||||||||||     
T  7824582 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttat 7824483  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  ||||||||| ||||||||||||||    
T  7824482 tttcagtggattaccacttcatctaagac 7824454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 50 - 178
Target Start/End: Complemental strand, 29689610 - 29689482
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| ||||||||||||||||||| | ||||||||||| ||||||||||||   |||||||||||||||||||||||||||||||||||||||     
T  29689610 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttat 29689511  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  ||||||||| ||||||||||||||    
T  29689510 tttcagtggattaccacttcatctaagac 29689482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 50 - 178
Target Start/End: Complemental strand, 51666053 - 51665925
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| ||||||||||||||||||| | ||||||||||| ||||||||||||  |||||||||||||||||||| |||||||||||||||||||     
T  51666053 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacctgggttcgaacccgggaccttacagttgtgtgtgagtttat 51665954  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  ||||||||| ||||||||||||||    
T  51665953 tttcagtggattaccacttcatctaagac 51665925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 50 - 178
Target Start/End: Complemental strand, 54151809 - 54151681
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| ||||||||||||||||||| | ||||||||||| ||||||||||||   |||||||||||||||||||||||||||||| ||||||||     
T  54151809 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtatgagtttat 54151710  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  ||||||||| ||||||||||||||    
T  54151709 tttcagtggattaccacttcatctaagac 54151681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 48 - 178
Target Start/End: Original strand, 4601423 - 4601553
Alignment:
Q  48 cagtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagttt 147  Q
    |||||||||||| ||||||||||||||||||| | ||||||||||| ||||||||||||   |||||||||||||| |||||||||||||||||||||||    
T  4601423 cagtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccggaacctcacagttgtgtgtgagttt 4601522  T
Q  148 aatttatgtggattacgacttcatctaagac 178  Q
    | |||  ||||||||| | ||||||||||||    
T  4601523 attttcagtggattaccagttcatctaagac 4601553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 50 - 172
Target Start/End: Complemental strand, 55018162 - 55018040
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| ||| ||||||||||||||||||||||||||||| |||||||| |||   |||||||||||||||||||||||||||||||||||||||     
T  55018162 gtctagaagtcctaactcaactggcaaatgtcaaaattgcaaggccggacgtcgtgacccgggttcgaacccgggacctcacagttgtgtgtgagtttat 55018063  T
Q  150 tttatgtggattacgacttcatc 172  Q
    |||  ||||||||| ||||||||    
T  55018062 tttcagtggattaccacttcatc 55018040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 49 - 177
Target Start/End: Complemental strand, 35461608 - 35461480
Alignment:
Q  49 agtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagttta 148  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||||||  ||||  |||||||||||||| ||||||||||||||||||||||||    
T  35461608 agtctagaagttctagctcaactggcaaatgccgaaattgcaaggtcggacgttgtgatccgggttcgaacccggaacctcacagttgtgtgtgagttta 35461509  T
Q  149 atttatgtggattacgacttcatctaaga 177  Q
     ||| ||| |||||  | |||||||||||    
T  35461508 ttttctgtagattatcatttcatctaaga 35461480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 62 - 178
Target Start/End: Complemental strand, 36229110 - 36228994
Alignment:
Q  62 tagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaatttatgtggatt 161  Q
    |||||||||||||||||| | ||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||| |||   ||||||    
T  36229110 tagctcaactggcaaatgccgaaattgcaaggccggacgtcatgatccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcaatggatt 36229011  T
Q  162 acgacttcatctaagac 178  Q
    || ||||||||||||||    
T  36229010 accacttcatctaagac 36228994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 47 - 178
Target Start/End: Original strand, 52500835 - 52500966
Alignment:
Q  47 gcagtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtt 146  Q
    ||||||||||||| ||||||||||||||||||||| |||||| |||| |||||||||||||  ||||||||||| |  ||||||||||||||||||||||    
T  52500835 gcagtctagaagtcctagctcaactggcaaatgtcgaaattgtaaggccggacgtcatgatccgggttcgaacctgaaacctcacagttgtgtgtgagtt 52500934  T
Q  147 taatttatgtggattacgacttcatctaagac 178  Q
    || |||  || |||||| ||||||||||||||    
T  52500935 tattttcagtagattaccacttcatctaagac 52500966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 66 - 175
Target Start/End: Complemental strand, 9349788 - 9349679
Alignment:
Q  66 tcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaatttatgtggattacga 165  Q
    |||||||||||||| | |||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||| |||  ||||||||| |    
T  9349788 tcaactggcaaatgccgaaattgcaaggtcggacgtcgtgatccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattacca 9349689  T
Q  166 cttcatctaa 175  Q
    ||||||||||    
T  9349688 cttcatctaa 9349679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 50 - 178
Target Start/End: Original strand, 28844504 - 28844633
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagttta- 148  Q
    ||||||||||||||||||||||| |||||| | ||||||||||| |||||||  |||   ||||||||||| || ||||||||||||||||||||||||     
T  28844504 gtctagaagttctagctcaactgacaaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacctggaacctcacagttgtgtgtgagtttat 28844603  T
Q  149 atttatgtggattacgacttcatctaagac 178  Q
     |||  ||||||||| ||||||||||||||    
T  28844604 ttttcagtggattaccacttcatctaagac 28844633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 66 - 178
Target Start/End: Complemental strand, 475392 - 475281
Alignment:
Q  66 tcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaatttatgtggattacga 165  Q
    |||||||| |||||   |||||||||||||||||||||||||  |||||||||| ||| ||||||||||||||||||||||||||| | ||| ||||| |    
T  475392 tcaactgggaaatgctgaaattgcaaggtcggacgtcatgatccgggttcgaactcggaacctcacagttgtgtgtgagtttaattca-gtgaattacca 475294  T
Q  166 cttcatctaagac 178  Q
    |||||||||||||    
T  475293 cttcatctaagac 475281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 62 - 178
Target Start/End: Complemental strand, 3113111 - 3112995
Alignment:
Q  62 tagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaatttatgtggatt 161  Q
    |||||||||||||||||| | ||||||||||| |||||||| | |   | |||||||||||||| |||||||||||||||||||||| |||  |||||||    
T  3113111 tagctcaactggcaaatgccgaaattgcaaggccggacgtcgtaacccgagttcgaacccgggatctcacagttgtgtgtgagtttattttcagtggatt 3113012  T
Q  162 acgacttcatctaagac 178  Q
    || ||||||||||||||    
T  3113011 accacttcatctaagac 3112995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 50 - 178
Target Start/End: Original strand, 41377584 - 41377707
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| ||||||||||||||||||| |||||||| |||| |||||||||||||   |||||||||||||||||||||     ||||||||||||     
T  41377584 gtctagaagtcctagctcaactggcaaatgccaaaattgtaaggccggacgtcatgatccaggttcgaacccgggacctcac-----tgtgtgagtttat 41377678  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  | ||||||| ||||||||||||||    
T  41377679 tttcagcggattaccacttcatctaagac 41377707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 50 - 178
Target Start/End: Original strand, 33334608 - 33334736
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| ||||||||||| ||||||| | ||||||||| | |||||||  |||  || ||||||| ||||||||||||||||||||||||||||||    
T  33334608 gtctagaagtcctagctcaacttgcaaatgccgaaattgcaaagccggacgttgtgacctgagttcgaatccgggacctcacagttgtgtgtgagtttaa 33334707  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  || |||||  ||||||| ||||||    
T  33334708 tttcagtagattatcacttcatataagac 33334736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 77 - 177
Target Start/End: Complemental strand, 38257404 - 38257304
Alignment:
Q  77 atgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaatttatgtggattacgacttcatctaag 176  Q
    ||||| |||||||||||||||||||| |||  ||||||||||||| | |||||||| |||||||||||||||||||  | ||||||| ||||||||||||    
T  38257404 atgtcgaaattgcaaggtcggacgtcgtgacctgggttcgaacccagaacctcacaattgtgtgtgagtttaatttcagcggattaccacttcatctaag 38257305  T
Q  177 a 177  Q
    |    
T  38257304 a 38257304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 50 - 177
Target Start/End: Complemental strand, 40756856 - 40756728
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacg-tcatgatatgggttcgaacccgggacctcacagttgtgtgtgagttta 148  Q
    |||||||||| ||| ||||||||  ||||| ||||||||||||||| |||| |||||||  || |||||||||| ||||||||||||| |||||||||||    
T  40756856 gtctagaagtcctaactcaactgaaaaatgccaaaattgcaaggtcagacgatcatgatccggattcgaacccgagacctcacagttgcgtgtgagttta 40756757  T
Q  149 atttatgtggattacgacttcatctaaga 177  Q
    ||||  || | |||| |||||||||||||    
T  40756756 atttcagtagtttaccacttcatctaaga 40756728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 50 - 178
Target Start/End: Original strand, 43775223 - 43775351
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    ||||| |||||||| ||||||||||||||| | |||||| ||||||||||||  |||  || ||||||| |||| | ||||||||||| | |||||||||    
T  43775223 gtctaaaagttctaactcaactggcaaatgccgaaattgtaaggtcggacgttgtgacttgcgttcgaatccggaatctcacagttgtatttgagtttaa 43775322  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  ||||||||| ||||||||||||||    
T  43775323 tttcagtggattaccacttcatctaagac 43775351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 50 - 175
Target Start/End: Original strand, 7958569 - 7958694
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| ||| |||||||| ||||||||||||||| || |  ||| | | ||||  |||||||||||||||||||||||||| ||||| ||||||     
T  7958569 gtctagaagtcctacctcaactgacaaatgtcaaaattgtaaagcaggatgccgtgatccgggttcgaacccgggacctcacagttatgtgtaagtttat 7958668  T
Q  150 tttatgtggattacgacttcatctaa 175  Q
    |||  ||||||||| |||||||||||    
T  7958669 ttttagtggattaccacttcatctaa 7958694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 49 - 178
Target Start/End: Original strand, 50729523 - 50729652
Alignment:
Q  49 agtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagttta 148  Q
    |||||||||||||||||||||||| |||||| | |||||| |||||| |||||| |||| ||| |||||||  | |||||| ||||| | ||||||||||    
T  50729523 agtctagaagttctagctcaactgacaaatgccgaaattgtaaggtcagacgtcgtgatctggattcgaacatgagacctcgcagttttatgtgagttta 50729622  T
Q  149 atttatgtggattacgacttcatctaagac 178  Q
    ||||   | |||||| ||||||||||||||    
T  50729623 atttcaatagattaccacttcatctaagac 50729652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 49 - 178
Target Start/End: Complemental strand, 50783326 - 50783197
Alignment:
Q  49 agtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagttta 148  Q
    |||||||||||||||||||||||| |||||| | |||||| |||||| |||||| |||| ||| |||||||  | |||||| ||||| | ||||||||||    
T  50783326 agtctagaagttctagctcaactgacaaatgccgaaattgtaaggtcagacgtcgtgatctggattcgaacatgagacctcgcagttttatgtgagttta 50783227  T
Q  149 atttatgtggattacgacttcatctaagac 178  Q
    ||||   | |||||| ||||||||||||||    
T  50783226 atttcaatagattaccacttcatctaagac 50783197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 62 - 169
Target Start/End: Complemental strand, 448991 - 448884
Alignment:
Q  62 tagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaatttatgtggatt 161  Q
    ||||||||||| ||||||||||||||| |||| |||||||| ||||  |  ||||||||  ||||||||||||||| ||||||||||||||  |||||||    
T  448991 tagctcaactgacaaatgtcaaaattgtaaggccggacgtcgtgatccgaattcgaacctaggacctcacagttgtttgtgagtttaattttagtggatt 448892  T
Q  162 acgacttc 169  Q
    || |||||    
T  448891 accacttc 448884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 51 - 178
Target Start/End: Original strand, 51054702 - 51054829
Alignment:
Q  51 tctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaat 150  Q
    ||||||||| ||| |||||||| |||||||| ||||| |||||||| |||| |||||  |||||||||| |   |||||| | |||| ||| ||||||||    
T  51054702 tctagaagtcctaactcaactgacaaatgtcgaaattacaaggtcgaacgttatgattcgggttcgaactcaaaacctcataattgtttgtaagtttaat 51054801  T
Q  151 ttatgtggattacgacttcatctaagac 178  Q
    ||| ||||||||| ||||||||||||||    
T  51054802 ttaagtggattaccacttcatctaagac 51054829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 54 - 178
Target Start/End: Complemental strand, 55320523 - 55320400
Alignment:
Q  54 agaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaattta 153  Q
    |||| ||||||||||| || |||||| |||||||| || |||||||||||| ||   |||| ||||| || |||||| ||||||||||||||||| |||     
T  55320523 agaaattctagctcaattgacaaatgccaaaattgtaaagtcggacgtcataattcaggtttgaacctgg-acctcatagttgtgtgtgagtttattttc 55320425  T
Q  154 tgtggattacgacttcatctaagac 178  Q
     ||||||||| ||||||||||||||    
T  55320424 agtggattaccacttcatctaagac 55320400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 50 - 176
Target Start/End: Original strand, 1778851 - 1778977
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| |||||||||||| |||||| | ||||||||||| ||||| |  |||   |||||||||||||| |||||||| |||||| ||| ||||     
T  1778851 gtctagaagtcctagctcaactgacaaatgccgaaattgcaaggccggacattgtgacccgggttcgaacccggaacctcacaattgtgtttgaatttat 1778950  T
Q  150 tttatgtggattacgacttcatctaag 176  Q
    |||   |||||||| ||||||||||||    
T  1778951 tttcaatggattaccacttcatctaag 1778977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 50 - 178
Target Start/End: Original strand, 29750621 - 29750748
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| ||| ||||||||||||||| | |||||||||||  ||||||| |||   || |||||||  | ||||||||| ||||| ||||||| ||    
T  29750621 gtctagaagtactaactcaactggcaaatgccgaaattgcaaggctggacgtcgtgacccggattcgaactagagacctcacatttgtgcgtgagttaaa 29750720  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    || | ||||||||| ||||||||||||||    
T  29750721 ttca-gtggattaccacttcatctaagac 29750748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 50 - 178
Target Start/End: Complemental strand, 47635133 - 47635005
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| |||  |||||||| |||| |   |||||||||||||||| |  |||  |||||||||| || ||||||| ||||| ||||| |||||||    
T  47635133 gtctagaagtcctaattcaactggtaaattttggaattgcaaggtcggacattgtgacctgggttcgaatccaggacctcgcagttatgtgtaagtttaa 47635034  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  || |||||| ||||||||||||||    
T  47635033 tttcagttgattaccacttcatctaagac 47635005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 178
Target Start/End: Complemental strand, 2590928 - 2590810
Alignment:
Q  51 tctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaat 150  Q
    |||| |||| ||| ||||||||| ||||||| ||||||||||| || || || |||| ||||||||||||| |||||||||         ||||||||||    
T  2590928 tctataagtcctaactcaactggaaaatgtcgaaattgcaaggccgaacatcgtgatctgggttcgaaccctggacctcac---------tgagtttaat 2590838  T
Q  151 ttatgtggattacgacttcatctaagac 178  Q
    ||  ||||||||| ||||||||||||||    
T  2590837 ttcagtggattaccacttcatctaagac 2590810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 48 - 152
Target Start/End: Original strand, 23939177 - 23939281
Alignment:
Q  48 cagtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagttt 147  Q
    ||||||| |||||||| ||||| || ||||| ||||||||| || |||| | ||||||||  |||||  ||||||  |||||||| || |||||||||||    
T  23939177 cagtctataagttctaactcaattgacaaatatcaaaattgtaacgtcgaatgtcatgattcgggtttaaacccgtaacctcacaattttgtgtgagttt 23939276  T
Q  148 aattt 152  Q
    |||||    
T  23939277 aattt 23939281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 121
Target Start/End: Complemental strand, 51112588 - 51112521
Alignment:
Q  54 agaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaaccc 121  Q
    |||||| ||||||||||||||||||| | ||||||| ||| ||||||||||||   ||||||||||||    
T  51112588 agaagtcctagctcaactggcaaatgccgaaattgctaggccggacgtcatgaccggggttcgaaccc 51112521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 49 - 178
Target Start/End: Complemental strand, 8137760 - 8137633
Alignment:
Q  49 agtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagttta 148  Q
    |||||| | ||||||||||||||  ||||||  |||||||||||||||||||||||||   | ||| ||| | |  ||||||||||  ||||||||||||    
T  8137760 agtctatacgttctagctcaactaacaaatgcaaaaattgcaaggtcggacgtcatgacccgagtttgaatctgaaacctcacagt--tgtgtgagttta 8137663  T
Q  149 atttatgtggattacgacttcatctaagac 178  Q
    ||||   ||| |||| |||| |||||||||    
T  8137662 atttcaatggcttaccactttatctaagac 8137633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 178
Target Start/End: Complemental strand, 31305868 - 31305744
Alignment:
Q  53 tagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaattt 152  Q
    |||||||  |||||||| ||||||||||| |||||||||||| | || ||||||| ||  |||||||| |  | |||||||||||||||| ||| |||||    
T  31305868 tagaagtcttagctcaattggcaaatgtcgaaattgcaaggtagaacatcatgat-tgacttcgaacctgaaaactcacagttgtgtgtgtgttaaattt 31305770  T
Q  153 atgtggattacgacttcatctaagac 178  Q
    | || | |||  |||| |||||||||    
T  31305769 aagtagtttatcactttatctaagac 31305744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 178
Target Start/End: Complemental strand, 32001553 - 32001424
Alignment:
Q  49 agtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagttta 148  Q
    ||||||||||| ||| ||||||||| ||||| | |||||| |||| || || || |||    ||||||||| || || ||||||||||||||||||||||    
T  32001553 agtctagaagtcctacctcaactggtaaatgccgaaattgtaaggccgaacatcttgaaccaggttcgaactcgagatctcacagttgtgtgtgagttta 32001454  T
Q  149 atttatgtggattacgacttcatctaagac 178  Q
     |||  |||  |||| ||||||| ||||||    
T  32001453 ttttcagtgatttaccacttcatataagac 32001424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 162
Target Start/End: Original strand, 43023694 - 43023747
Alignment:
Q  109 tgggttcgaacccgggacctcacagttgtgtgtgagtttaatttatgtggatta 162  Q
    |||||||||| |||| |||||||| || ||||||||||||||||| ||||||||    
T  43023694 tgggttcgaatccggaacctcacatttatgtgtgagtttaatttaagtggatta 43023747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 178
Target Start/End: Original strand, 28458663 - 28458790
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| ||| |||||||| |||||||| ||||||||||| | || ||| ||||   |||| |||||| | |||||||||||| |||| |||||||    
T  28458663 gtctagaagtcctaactcaactgacaaatgtcgaaattgcaaggccagatgtcgtgat-ccggtttgaacccagaacctcacagttgcgtgtaagtttaa 28458761  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
     ||   |  ||||| ||||||||||||||    
T  28458762 cttcaataaattaccacttcatctaagac 28458790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 83 - 152
Target Start/End: Original strand, 8151381 - 8151450
Alignment:
Q  83 aaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaattt 152  Q
    ||||||||| | || ||||| ||||  ||||||||||||| || ||||||||| ||||| ||||||||||    
T  8151381 aaattgcaaagacgaacgtcgtgatccgggttcgaacccgagatctcacagttatgtgtcagtttaattt 8151450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 118
Target Start/End: Original strand, 28731847 - 28731915
Alignment:
Q  51 tctagaagttctagctcaactggc-aaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaa 118  Q
    |||||||||||||||||||||| | ||||||| ||||||  |||||||| | ||||||  |||||||||    
T  28731847 tctagaagttctagctcaactgacaaaatgtcgaaattgttaggtcggatgccatgatcggggttcgaa 28731915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 121
Target Start/End: Complemental strand, 47410877 - 47410809
Alignment:
Q  54 agaagttctagctcaactggc-aaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaaccc 121  Q
    |||||| |||||||||||||| ||||||| ||||||  |||||||| |||||||   ||||||||||||    
T  47410877 agaagtcctagctcaactggcaaaatgtcgaaattgttaggtcggatgtcatgaccggggttcgaaccc 47410809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 102
Target Start/End: Original strand, 47770329 - 47770377
Alignment:
Q  54 agaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtc 102  Q
    |||||| ||||||||||||  ||||||| |||||||||| |||||||||    
T  47770329 agaagtcctagctcaactgataaatgtcgaaattgcaagctcggacgtc 47770377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 89; Significance: 6e-43; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 50 - 178
Target Start/End: Original strand, 1173951 - 1174079
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| ||||||||||||||||||| | ||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||||     
T  1173951 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacctgggttcgaacccgggacctcacagttgtgtgtgagtttat 1174050  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  ||||||||| ||||||||||||||    
T  1174051 tttcagtggattaccacttcatctaagac 1174079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 50 - 178
Target Start/End: Complemental strand, 43140034 - 43139906
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||   |||||||||||||||||||||||||||||||||||||||     
T  43140034 gtctagaagttctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttat 43139935  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  ||||||||| ||||||||||||||    
T  43139934 tttcagtggattaccacttcatctaagac 43139906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 49 - 178
Target Start/End: Original strand, 34739279 - 34739408
Alignment:
Q  49 agtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagttta 148  Q
    ||||||||||| ||||||||||||||||||| | ||||||||||| ||||||||||||   |||||||||||||||||||||||||||||||||||||||    
T  34739279 agtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagttta 34739378  T
Q  149 atttatgtggattacgacttcatctaagac 178  Q
     |||  ||||||||| ||||||||||||||    
T  34739379 ttttcagtggattaccacttcatctaagac 34739408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 50 - 178
Target Start/End: Original strand, 53457824 - 53457952
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||   ||||||||| |||||||||||||||||||||||||||||     
T  53457824 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggtcggacgtcatgacccgggttcgaatccgggacctcacagttgtgtgtgagtttat 53457923  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  ||||||||| ||||||||||||||    
T  53457924 tttcagtggattaccacttcatctaagac 53457952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 49 - 178
Target Start/End: Complemental strand, 26424986 - 26424858
Alignment:
Q  49 agtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagttta 148  Q
    ||||||||||| ||||||||||||||||||| | ||||||||||| ||||||||||||   |||||||||||||||||||||||||||||||||||||||    
T  26424986 agtctagaagtcctagctcaactggcaaatgccgaaattgcaagg-cggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagttta 26424888  T
Q  149 atttatgtggattacgacttcatctaagac 178  Q
     |||  ||||||||| ||||||||||||||    
T  26424887 ttttcagtggattaccacttcatctaagac 26424858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 50 - 178
Target Start/End: Original strand, 18257329 - 18257457
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| ||||||||||||||||||| | ||||||||||| |||||||||||||  |||||||| |||||||||||||||||||| |||||||||     
T  18257329 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgatccgggttcgagcccgggacctcacagttgtgcgtgagtttat 18257428  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  ||||||||| ||||||||||||||    
T  18257429 tttcagtggattaccacttcatctaagac 18257457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 49 - 178
Target Start/End: Complemental strand, 19849632 - 19849503
Alignment:
Q  49 agtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagttta 148  Q
    ||||||||||| ||||||||||||||||||| | ||||||||||| |||||||| ||||  |||||||||||||||||||||||||||||||||||||||    
T  19849632 agtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcgtgatccgggttcgaacccgggacctcacagttgtgtgtgagttta 19849533  T
Q  149 atttatgtggattacgacttcatctaagac 178  Q
     |||   ||| |||| ||||||||||||||    
T  19849532 ttttcaatggtttaccacttcatctaagac 19849503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 50 - 178
Target Start/End: Original strand, 45874055 - 45874183
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| |||||||||||| |||||| ||||||||||||| |||||||  |||   |||||||||||||||||||||||||||||||||||||||     
T  45874055 gtctagaagtcctagctcaactgacaaatgccaaaattgcaaggccggacgttgtgacccgggttcgaacccgggacctcacagttgtgtgtgagtttat 45874154  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  ||||||||| ||||||||||||||    
T  45874155 tttcagtggattaccacttcatctaagac 45874183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 50 - 178
Target Start/End: Complemental strand, 238586 - 238458
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| |||||||||||| |||||| | |||||||||||  ||||| |||||  ||||||||||||||||||||||||||||||||||||||||     
T  238586 gtctagaagtcctagctcaactgtcaaatgccgaaattgcaaggctggacgccatgacctgggttcgaacccgggacctcacagttgtgtgtgagtttat 238487  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  ||||||||| |||||||| |||||    
T  238486 tttcagtggattaccacttcatcgaagac 238458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 50 - 178
Target Start/End: Complemental strand, 28798516 - 28798388
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| |||| |||||||||||||| | ||||||||||| |||||||| |||   ||||||||||||||||||| |||||||||||||||||||     
T  28798516 gtctagaagtcctagttcaactggcaaatgccgaaattgcaaggccggacgtcgtgacccgggttcgaacccgggaccttacagttgtgtgtgagtttat 28798417  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  ||||||||| ||||||||||||||    
T  28798416 tttcagtggattaccacttcatctaagac 28798388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 50 - 178
Target Start/End: Complemental strand, 54768560 - 54768432
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| ||||||||||||||||||| | ||||||||||| ||||||||||||   |||||||||||| |||||||||||||||||| ||||||      
T  54768560 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccaggacctcacagttgtgtgcgagttttt 54768461  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  ||||||||| ||||||||||||||    
T  54768460 tttcagtggattaccacttcatctaagac 54768432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 50 - 178
Target Start/End: Original strand, 12867841 - 12867969
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    ||||||||||||||||||||||| |||||| | |||||||||||||||||||| |||   | ||||||||| |||| |||||||||||| |||||||||     
T  12867841 gtctagaagttctagctcaactgtcaaatgccgaaattgcaaggtcggacgtcgtgacccgagttcgaacctgggatctcacagttgtgagtgagtttat 12867940  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  ||||||||| ||||||||||||||    
T  12867941 tttcagtggattaccacttcatctaagac 12867969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 52 - 178
Target Start/End: Original strand, 19225261 - 19225387
Alignment:
Q  52 ctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaatt 151  Q
    |||||||| ||||||||||||||||||| | |||||| || | |||||||||||||  ||||||||||||||||||||||| ||||| ||||||||| ||    
T  19225261 ctagaagtcctagctcaactggcaaatgccgaaattgtaaagccggacgtcatgatccgggttcgaacccgggacctcacaattgtgcgtgagtttagtt 19225360  T
Q  152 tatgtggattacgacttcatctaagac 178  Q
    |  |||| |||| ||||||||||||||    
T  19225361 tcagtggtttaccacttcatctaagac 19225387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 53 - 178
Target Start/End: Original strand, 22607988 - 22608113
Alignment:
Q  53 tagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaattt 152  Q
    ||||||| |||||||||||| || ||||| ||||||||||| |||||||| |||   |||||||||||||||||||||||||||||| ||||||||||||    
T  22607988 tagaagtcctagctcaactgacagatgtcgaaattgcaaggccggacgtcgtgacccgggttcgaacccgggacctcacagttgtgtctgagtttaattt 22608087  T
Q  153 atgtggattacgacttcatctaagac 178  Q
       |||||||| ||||||||| ||||    
T  22608088 caatggattactacttcatctgagac 22608113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 61 - 178
Target Start/End: Complemental strand, 23417600 - 23417483
Alignment:
Q  61 ctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaatttatgtggat 160  Q
    ||||||||||||||||||| ||||||||||||| |||||||  |||   ||||||||||||||||| | ||||||||||||||||||| |||  ||||||    
T  23417600 ctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacccgggttcgaacccgggactttacagttgtgtgtgagtttattttcagtggat 23417501  T
Q  161 tacgacttcatctaagac 178  Q
    ||| ||||||||||||||    
T  23417500 taccacttcatctaagac 23417483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 50 - 178
Target Start/End: Original strand, 12735431 - 12735559
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| |||||||||||| |||||| |||||||| |||| | |||||  |||   |||||||||||| ||||||||||||||||||||||||||     
T  12735431 gtctagaagtactagctcaactgacaaatgccaaaattgtaaggccagacgttgtgacccgggttcgaacccaggacctcacagttgtgtgtgagtttat 12735530  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  ||||||||| ||||||||||||||    
T  12735531 tttcagtggattaccacttcatctaagac 12735559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 54 - 178
Target Start/End: Complemental strand, 29581167 - 29581044
Alignment:
Q  54 agaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaattta 153  Q
    |||||| ||||||||| || || ||| | ||||||||||| |||||||| |||  | |||||||||||| ||||||||||||||||||||||||||||||    
T  29581167 agaagtcctagctcaattgtcagatgccgaaattgcaaggccggacgtcgtgacctaggttcgaacccgagacctcacagttgtgtgtgagtttaattta 29581068  T
Q  154 tgtggattacgacttcatctaagac 178  Q
     ||||||||| ||||||||||||||    
T  29581067 -gtggattaccacttcatctaagac 29581044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 55214651 - 55214779
Alignment:
Q  49 agtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagttta 148  Q
    |||||||||||  || |||||||| |||||| ||||||||||||| |||||||| |||   |||||||||||||||||||||||||||||| ||||||||    
T  55214651 agtctagaagtcttaactcaactgtcaaatgccaaaattgcaaggccggacgtcgtgacccgggttcgaacccgggacctcacagttgtgtatgagttta 55214750  T
Q  149 atttatgtggattacgacttcatctaaga 177  Q
     |||  ||||||||| |||| ||||||||    
T  55214751 ttttcagtggattaccactttatctaaga 55214779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 50 - 177
Target Start/End: Original strand, 12767087 - 12767214
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| ||||||||||||| ||||| | |||||| ||| |||||||||||||| |||||||||| |||  |||||||||||||||||||||||||    
T  12767087 gtctagaagtcctagctcaactggtaaatgccgaaattgtaagatcggacgtcatgatctgggttcgaatccgaaacctcacagttgtgtgtgagtttaa 12767186  T
Q  150 tttatgtggattacgacttcatctaaga 177  Q
    |||   ||| ||||  ||||||||||||    
T  12767187 tttcactggtttactgcttcatctaaga 12767214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 65 - 152
Target Start/End: Original strand, 2075521 - 2075607
Alignment:
Q  65 ctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaattt 152  Q
    |||||||| ||||| ||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  2075521 ctcaactgccaaatatcaaa-ttgcaagggcggacgtcatgatttgggttcgaacccgggacctcacagttatgtgtgagtttaattt 2075607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 50 - 178
Target Start/End: Original strand, 11277982 - 11278106
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| ||||||||||||||||||| | ||||||||||| ||||| ||||||   |||||| ||||||||||||||||||    |||||||||||    
T  11277982 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacatcatgacccgggttcaaacccgggacctcacagt----tgtgagtttaa 11278077  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  |||| |||| ||||||||||||||    
T  11278078 tttcagtggtttaccacttcatctaagac 11278106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 49 - 143
Target Start/End: Complemental strand, 32441213 - 32441119
Alignment:
Q  49 agtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtga 143  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||| | ||| ||||||   ||||||||||||||||||||||||||||| ||||    
T  32441213 agtctagaagtcctagctcaactggcaaatgtcgaaattgcaaggccagacatcatgacccgggttcgaacccgggacctcacagttgtgcgtga 32441119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 49 - 178
Target Start/End: Original strand, 55400227 - 55400356
Alignment:
Q  49 agtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagttta 148  Q
    ||||||||| | ||| ||||||||| ||||| | ||||||||||| |||||||||||||  || ||||||| ||| |||||| |||||| ||||||||||    
T  55400227 agtctagaaatcctaactcaactggtaaatgccgaaattgcaaggccggacgtcatgatccggattcgaactcggaacctcatagttgtatgtgagttta 55400326  T
Q  149 atttatgtggattacgacttcatctaagac 178  Q
     |||  ||||||||| ||||||||||||||    
T  55400327 ttttcagtggattaccacttcatctaagac 55400356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 50 - 178
Target Start/End: Complemental strand, 19674057 - 19673929
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    ||||||||||  |||||||||||| ||||||  ||||||||||| || ||||  |||  |||||||||||||||||||||||| || |||| ||||||||    
T  19674057 gtctagaagtcttagctcaactggtaaatgtagaaattgcaaggccgaacgttgtgacctgggttcgaacccgggacctcacaattatgtgcgagtttaa 19673958  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  ||||||||| ||||||| ||||||    
T  19673957 tttcagtggattaccacttcatttaagac 19673929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 50 - 174
Target Start/End: Complemental strand, 23710461 - 23710337
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    ||||||||||  |||||||||||| ||||||| ||||||||||| |||||||| |||   || |||||||| || |||||||||||  ||||||||||||    
T  23710461 gtctagaagtcatagctcaactggtaaatgtcgaaattgcaaggccggacgtcgtgacccggattcgaacctggaacctcacagttacgtgtgagtttaa 23710362  T
Q  150 tttatgtggattacgacttcatcta 174  Q
    |||  ||||||||| ||||||||||    
T  23710361 tttcagtggattaccacttcatcta 23710337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 82 - 178
Target Start/End: Original strand, 33770600 - 33770696
Alignment:
Q  82 aaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaatttatgtggattacgacttcatctaagac 178  Q
    ||||||| ||||||| |||||||||| |||||||||||||||||| ||| |||||||||||||||||||||  |||| ||||  |||||||||||||    
T  33770600 aaaattgtaaggtcgaacgtcatgatttgggttcgaacccgggacttcatagttgtgtgtgagtttaatttcagtggtttaccgcttcatctaagac 33770696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 50 - 152
Target Start/End: Original strand, 37134048 - 37134150
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| |||| ||||||||||||||   ||||| |||||||||| ||||||||  |||||||||||||  || ||||||||||||||||||||||    
T  37134048 gtctagaagtcctagttcaactggcaaatgctgaaattacaaggtcggatgtcatgatccgggttcgaacccgaaacttcacagttgtgtgtgagtttaa 37134147  T
Q  150 ttt 152  Q
    |||    
T  37134148 ttt 37134150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 174
Target Start/End: Original strand, 19814108 - 19814229
Alignment:
Q  53 tagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaattt 152  Q
    |||||||  ||||||||||||||||||   |||||| |||| |||||||| |||  ||||||| |||| ||||||||||| || ||||||||||||||||    
T  19814108 tagaagtcttagctcaactggcaaatgcagaaattgtaaggccggacgtcgtgacctgggttcaaacctgggacctcacaattatgtgtgagtttaattt 19814207  T
Q  153 atgtggattacgacttcatcta 174  Q
      || |||||| ||||||||||    
T  19814208 cagttgattaccacttcatcta 19814229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 50 - 178
Target Start/End: Original strand, 31014982 - 31015110
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    ||||||||||  |||||||||||  |||| |  |||||| |||||||||| |||||||  |||||||||  | | |||||||||||||||||||||||||    
T  31014982 gtctagaagtcatagctcaactgctaaatatggaaattgtaaggtcggacatcatgattcgggttcgaattcagaacctcacagttgtgtgtgagtttaa 31015081  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  |||  |||| ||||||||||||||    
T  31015082 tttcagtgctttaccacttcatctaagac 31015110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 111 - 178
Target Start/End: Original strand, 1966611 - 1966678
Alignment:
Q  111 ggttcgaacccgggacctcacagttgtgtgtgagtttaatttatgtggattacgacttcatctaagac 178  Q
    ||||||||  ||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||    
T  1966611 ggttcgaattcgggacctcacagttgtgtgtgagtttaatttcagtggattacaacttcatctaagac 1966678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 63 - 178
Target Start/End: Complemental strand, 52172105 - 52171990
Alignment:
Q  63 agctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaatttatgtggatta 162  Q
    ||||||| |||||||||||||||||| |||| | |||||| ||||  ||||| |||||  | |||||||| |||||||||||||||||||  ||||||||    
T  52172105 agctcaattggcaaatgtcaaaattgtaaggccagacgtcgtgattcgggtttgaacctagaacctcacaattgtgtgtgagtttaatttcagtggatta 52172006  T
Q  163 cgacttcatctaagac 178  Q
    | |||| || ||||||    
T  52172005 ccactttatttaagac 52171990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 49 - 178
Target Start/End: Original strand, 51287600 - 51287730
Alignment:
Q  49 agtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgag-ttt 147  Q
    |||||||||||   |||||| ||| |||||| |||||||| |||||| |||||| |||| ||||||  ||||||  |||||||||||||||||||| |||    
T  51287600 agtctagaagtcacagctcagctgacaaatgccaaaattgtaaggtcagacgtcgtgatctgggtttaaacccgaaacctcacagttgtgtgtgagtttt 51287699  T
Q  148 aatttatgtggattacgacttcatctaagac 178  Q
    |||||  ||| ||||| | ||||||||||||    
T  51287700 aatttcagtgaattaccatttcatctaagac 51287730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 64 - 152
Target Start/End: Complemental strand, 22910371 - 22910283
Alignment:
Q  64 gctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaattt 152  Q
    ||||||||| |||| ||| |||||||||||||||||||| |||   ||||||||||| |||| ||||||||||||| | ||||||||||    
T  22910371 gctcaactgacaaaagtcgaaattgcaaggtcggacgtcgtgacccgggttcgaacctgggatctcacagttgtgtctaagtttaattt 22910283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 64 - 152
Target Start/End: Original strand, 22968151 - 22968239
Alignment:
Q  64 gctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaattt 152  Q
    ||||||||| |||| ||| |||||||||||||||||||| |||   ||||||||||| |||| ||||||||||||| | ||||||||||    
T  22968151 gctcaactgacaaaagtcgaaattgcaaggtcggacgtcgtgacccgggttcgaacctgggatctcacagttgtgtctaagtttaattt 22968239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 50 - 178
Target Start/End: Complemental strand, 50347457 - 50347329
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| |||||||||||||  ||||||||| |||||| |  | ||||| |||| |||| |  || ||||||| | |||| |||||||||||||||    
T  50347457 gtctagaagtcctagctcaactggtcaatgtcaaagttgcaaagctgaacgtcgtgatctggggtataatccgggacattacagatgtgtgtgagtttaa 50347358  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  ||||||||| || |||||||||||    
T  50347357 tttcagtggattaccacctcatctaagac 50347329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 51 - 177
Target Start/End: Complemental strand, 516583 - 516457
Alignment:
Q  51 tctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaat 150  Q
    ||||||||||||| ||||||   ||||| ||||||||||||||| ||||||  |||   | ||| |||||| ||| |||||| ||||||||||||||| |    
T  516583 tctagaagttctaactcaaccaacaaatatcaaaattgcaaggttggacgttgtgactcgagtttgaacccaggatctcacaattgtgtgtgagtttatt 516484  T
Q  151 ttatgtggattacgacttcatctaaga 177  Q
    ||  |||||||||  ||||||||||||    
T  516483 ttcggtggattacagcttcatctaaga 516457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 152
Target Start/End: Complemental strand, 2864876 - 2864774
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| ||| ||||||||||||||| | |||||||||||  ||||||| |||   |||||||||||  | |||||| ||||||||||||| ||||    
T  2864876 gtctagaagtcctaactcaactggcaaatgcctaaattgcaaggcgggacgtcgtgacccgggttcgaacctagaacctcagagttgtgtgtgagcttaa 2864777  T
Q  150 ttt 152  Q
    |||    
T  2864776 ttt 2864774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 112 - 169
Target Start/End: Original strand, 39807906 - 39807963
Alignment:
Q  112 gttcgaacccgggacctcacagttgtgtgtgagtttaatttatgtggattacgacttc 169  Q
    |||||||| ||||||||||||||||||||||||||||||||  ||||||||| |||||    
T  39807906 gttcgaactcgggacctcacagttgtgtgtgagtttaatttcagtggattaccacttc 39807963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 71 - 164
Target Start/End: Complemental strand, 49030845 - 49030753
Alignment:
Q  71 tggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaatttatgtggattacg 164  Q
    ||||||||||| ||||||||||| |||||||| ||||  | ||||||| |||| |||||| |||||||||||||||||| ||  ||||||||||    
T  49030845 tggcaaatgtcgaaattgcaaggccggacgtcgtgatccgagttcgaa-ccggaacctcatagttgtgtgtgagtttaacttcagtggattacg 49030753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 53 - 178
Target Start/End: Complemental strand, 52768425 - 52768301
Alignment:
Q  53 tagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaattt 152  Q
    ||||||| |||||| | ||||||||||   ||| |||||||||||||||| ||||  |  ||||||||  ||| ||||||||||||||||||||||||||    
T  52768425 tagaagtgctagcttatctggcaaatgctgaaactgcaaggtcggacgtcgtgattcgaattcgaaccaaggatctcacagttgtgtgtgagtttaattt 52768326  T
Q  153 atgtggattacgacttcatctaagac 178  Q
       |||||||| | ||||||||||||    
T  52768325 caatggattacca-ttcatctaagac 52768301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 140
Target Start/End: Original strand, 3465755 - 3465842
Alignment:
Q  53 tagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtg 140  Q
    ||||||| ||||||||||| |||||| || ||||||||||| |||||||  ||||   ||||||||| |||||||||| |||||||||    
T  3465755 tagaagtcctagctcaactagcaaatatcgaaattgcaaggccggacgttgtgatccaggttcgaactcgggacctcatagttgtgtg 3465842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 61 - 152
Target Start/End: Original strand, 37395635 - 37395726
Alignment:
Q  61 ctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaattt 152  Q
    |||| ||||| | ||||| ||||||||||||||||||||||||||||  | |||| || | |  ||||||||||||||||||||| ||||||    
T  37395635 ctagttcaacggacaaatttcaaaattgcaaggtcggacgtcatgattcgagttcaaatctgaaacctcacagttgtgtgtgagtataattt 37395726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 66 - 140
Target Start/End: Original strand, 32778141 - 32778215
Alignment:
Q  66 tcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtg 140  Q
    ||||||| |||||  |||||||||||||||||||||| ||||  |||||||||| || ||||||||| |||||||    
T  32778141 tcaactgacaaataccaaaattgcaaggtcggacgtcgtgatccgggttcgaacacgagacctcacaattgtgtg 32778215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 178
Target Start/End: Original strand, 37620676 - 37620745
Alignment:
Q  109 tgggttcgaacccgggacctcacagttgtgtgtgagtttaatttatgtggattacgacttcatctaagac 178  Q
    |||||||||||||||||  |||||| | ||||||||||||||||  ||||||||| |||||||| |||||    
T  37620676 tgggttcgaacccgggatatcacaggtttgtgtgagtttaatttcagtggattaccacttcatcaaagac 37620745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 102
Target Start/End: Complemental strand, 40292742 - 40292691
Alignment:
Q  51 tctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtc 102  Q
    ||||||||||||| ||||||||  |||||||||||||| |||||||||||||    
T  40292742 tctagaagttctaactcaactgataaatgtcaaaattgtaaggtcggacgtc 40292691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 51 - 147
Target Start/End: Original strand, 46194249 - 46194346
Alignment:
Q  51 tctagaagttctagctcaactggcaaa-tgtcaaaattgcaaggtcggacgtcatgatatgggttcgaac-ccgggacctcacagttgtgtgtgagttt 147  Q
    |||| |||| ||||||||||||||||| |||||||||||  |||||||| ||||||||  |||||||||| |||| | ||| || ||||||||||||||    
T  46194249 tctaaaagtcctagctcaactggcaaaatgtcaaaattgttaggtcggatgtcatgatcagggttcgaactccggtaactc-cacttgtgtgtgagttt 46194346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 178
Target Start/End: Complemental strand, 24417946 - 24417878
Alignment:
Q  110 gggttcgaacccgggacctcacagttgtgtgtgagtttaatttatgtggattacgacttcatctaagac 178  Q
    ||||||||| ||| |||||||||||||||  ||||||||||||  ||||||||| ||||| || |||||    
T  24417946 gggttcgaatccgagacctcacagttgtggatgagtttaattttagtggattaccacttcttccaagac 24417878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 67 - 177
Target Start/End: Original strand, 2804539 - 2804647
Alignment:
Q  67 caactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaatttatgtggattacgac 166  Q
    |||||| ||||||  ||||||| ||||||||||||  |||   |||||||||||  |||||| |  ||| | ||||||||||||||| ||||||||| ||    
T  2804539 caactgacaaatgctaaaattgtaaggtcggacgttgtgacccgggttcgaacctaggacctta--gttttatgtgagtttaatttaagtggattaccac 2804636  T
Q  167 ttcatctaaga 177  Q
    ||||| |||||    
T  2804637 ttcatttaaga 2804647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 120 - 175
Target Start/End: Original strand, 23532117 - 23532172
Alignment:
Q  120 ccgggacctcacagttgtgtgtgagtttaatttatgtggattacgacttcatctaa 175  Q
    ||||||| |||||||||||||||||||||||||  ||| ||||| ||||| |||||    
T  23532117 ccgggacttcacagttgtgtgtgagtttaatttcagtgaattaccacttcttctaa 23532172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 125 - 178
Target Start/End: Original strand, 16555382 - 16555435
Alignment:
Q  125 acctcacagttgtgtgtgagtttaatttatgtggattacgacttcatctaagac 178  Q
    ||||||||||||||||||| ||||||||   || ||||| ||||||||||||||    
T  16555382 acctcacagttgtgtgtgaatttaattttaatgaattaccacttcatctaagac 16555435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 50 - 107
Target Start/End: Original strand, 19119144 - 19119201
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgat 107  Q
    ||||||||||  ||| |||||||  ||||||||||||| ||||| |||||||||||||    
T  19119144 gtctagaagtcttagttcaactgataaatgtcaaaattacaaggccggacgtcatgat 19119201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 177
Target Start/End: Original strand, 1125902 - 1126014
Alignment:
Q  65 ctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaatttatgtggattacg 164  Q
    ||||||||  ||||||| |||||| ||| ||||| ||| |||| ||  || ||||||  || ||||||||||||| ||||||||||||   |  |||||     
T  1125902 ctcaactgtgaaatgtcgaaattgtaagatcggatgtcgtgatttgaatttgaacccaagatctcacagttgtgtatgagtttaatttcaataaattacc 1126001  T
Q  165 acttcatctaaga 177  Q
    |||||||||||||    
T  1126002 acttcatctaaga 1126014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 31751876 - 31751837
Alignment:
Q  123 ggacctcacagttgtgtgtgagtttaatttatgtggattac 163  Q
    ||||||||||||||||||||| ||||||||| |||||||||    
T  31751876 ggacctcacagttgtgtgtgaatttaattta-gtggattac 31751837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 86; Significance: 3e-41; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 49 - 178
Target Start/End: Original strand, 32007073 - 32007202
Alignment:
Q  49 agtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagttta 148  Q
    ||||||||||| ||||||||||||||||||| | ||||||||||| ||||||||||||   |||||||||||||||||||||||||||||||||||||||    
T  32007073 agtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagttta 32007172  T
Q  149 atttatgtggattacgacttcatctaagac 178  Q
     |||  ||||||||| ||||||||||||||    
T  32007173 ttttcagtggattaccacttcatctaagac 32007202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 49 - 178
Target Start/End: Complemental strand, 5055917 - 5055788
Alignment:
Q  49 agtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagttta 148  Q
    ||||||||||| |||||||| |||||||||| | ||||||||||| ||||||||||||   |||||||||||||||||||||||||||||||||||||||    
T  5055917 agtctagaagtcctagctcagctggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagttta 5055818  T
Q  149 atttatgtggattacgacttcatctaagac 178  Q
     |||  ||||||||| ||||||||||||||    
T  5055817 ttttcagtggattaccacttcatctaagac 5055788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 50 - 178
Target Start/End: Original strand, 41808202 - 41808330
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| ||||||||||||||||||| | ||||||||||| ||||||||||||   |||||||||||||| ||||||||||||||||||||||||     
T  41808202 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccggaacctcacagttgtgtgtgagtttat 41808301  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  ||||||||| ||||||||||||||    
T  41808302 tttcagtggattaccacttcatctaagac 41808330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 48 - 178
Target Start/End: Complemental strand, 29994513 - 29994383
Alignment:
Q  48 cagtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagttt 147  Q
    |||||||||||| ||||||||||||||||||| | ||||||||||| | |||||||||||  ||||||||||||| ||||||||| ||||||||||||||    
T  29994513 cagtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccagacgtcatgatccgggttcgaacccgagacctcacaattgtgtgtgagttt 29994414  T
Q  148 aatttatgtggattacgacttcatctaagac 178  Q
    |||||  |||| |||| ||||||||||||||    
T  29994413 aatttcagtggtttaccacttcatctaagac 29994383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 49 - 178
Target Start/End: Original strand, 28455873 - 28456002
Alignment:
Q  49 agtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagttta 148  Q
    ||||||||||| ||||||||||||||||||| | ||||||||||| |||||||  |||   |||||||||||||||||||||||||||||||||||||||    
T  28455873 agtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacccgggacctcacagttgtgtgtgagttta 28455972  T
Q  149 atttatgtggattacgacttcatctaagac 178  Q
     |||  ||||||||| ||||||||||||||    
T  28455973 ttttcagtggattaccacttcatctaagac 28456002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 50 - 178
Target Start/End: Complemental strand, 45813139 - 45813011
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| |||||||||||| |||||| | ||||||||||||||||| || |||   |||||||||||||||||||||||||||||||||||||||     
T  45813139 gtctagaagtcctagctcaactgacaaatgccgaaattgcaaggtcggacatcgtgacccgggttcgaacccgggacctcacagttgtgtgtgagtttat 45813040  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  ||||||||| ||||||||||||||    
T  45813039 tttcagtggattaccacttcatctaagac 45813011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 50 - 178
Target Start/End: Original strand, 48660022 - 48660150
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| ||||||||||||||||||| | ||||||||||| ||||||| ||||   |||||||||||||||| ||||||||||||||||||||||     
T  48660022 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgttatgacccgggttcgaacccgggatctcacagttgtgtgtgagtttat 48660121  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  ||||||||| ||||||||||||||    
T  48660122 tttcagtggattaccacttcatctaagac 48660150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 50 - 178
Target Start/End: Original strand, 49783707 - 49783835
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    ||||| |||| ||| ||||| ||||||||||| |||||||||||||| ||||||||||  |||||||||||||| ||||||||||||| ||||| |||||    
T  49783707 gtctataagtcctaactcaattggcaaatgtcgaaattgcaaggtcgaacgtcatgattcgggttcgaacccggaacctcacagttgtatgtgaatttaa 49783806  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  |||| |||| ||||||||||||||    
T  49783807 tttcagtggtttaccacttcatctaagac 49783835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 49 - 178
Target Start/End: Original strand, 20747 - 20876
Alignment:
Q  49 agtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagttta 148  Q
    ||||||||||| ||| ||||||||||||||| | |||||||||||  ||||| | |||   || ||||||||||||||||||||||||||||||||||||    
T  20747 agtctagaagtcctaactcaactggcaaatgccgaaattgcaaggcaggacgccgtgacccggattcgaacccgggacctcacagttgtgtgtgagttta 20846  T
Q  149 atttatgtggattacgacttcatctaagac 178  Q
     |||  ||||||||| ||||||||||||||    
T  20847 tttttagtggattaccacttcatctaagac 20876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 49 - 178
Target Start/End: Original strand, 192414 - 192543
Alignment:
Q  49 agtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagttta 148  Q
    ||||||||||| |||||||||||| ||||||  |||||||||||| |||||||  ||||  | |||||||||| ||||||||||||||||||||||||||    
T  192414 agtctagaagtcctagctcaactgacaaatgctaaaattgcaaggccggacgttgtgatccgtgttcgaacccaggacctcacagttgtgtgtgagttta 192513  T
Q  149 atttatgtggattacgacttcatctaagac 178  Q
     |||  | ||||||| ||||||||||||||    
T  192514 ttttcagcggattaccacttcatctaagac 192543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 50 - 178
Target Start/End: Complemental strand, 41761539 - 41761411
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| |||| |||||||||||||| | ||||||||||| |||||||  |||   |||||||||||| ||||||||||||||||||||||||||     
T  41761539 gtctagaagtcctagttcaactggcaaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacccaggacctcacagttgtgtgtgagtttat 41761440  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  ||||||||| |||||||| |||||    
T  41761439 tttcagtggattaccacttcatccaagac 41761411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 61 - 178
Target Start/End: Original strand, 39276361 - 39276478
Alignment:
Q  61 ctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaatttatgtggat 160  Q
    ||||||||||||||||||| | ||||||||||| |||||||  |||   |||||||||||||||||||||||||| |||||||||||| |||  ||||||    
T  39276361 ctagctcaactggcaaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacccgggacctcacagttatgtgtgagtttattttcagtggat 39276460  T
Q  161 tacgacttcatctaagac 178  Q
    ||| ||||||| ||||||    
T  39276461 taccacttcatttaagac 39276478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 74 - 178
Target Start/End: Original strand, 7059491 - 7059595
Alignment:
Q  74 caaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaatttatgtggattacgacttcatct 173  Q
    |||||||||||||||||||||| |||||| |||   ||||||||| | | |||||||||||||||||||||||||||||| ||||||||| |||| ||||    
T  7059491 caaatgtcaaaattgcaaggtcagacgtcgtgacccgggttcgaatctgagacctcacagttgtgtgtgagtttaatttaagtggattaccactttatct 7059590  T
Q  174 aagac 178  Q
    |||||    
T  7059591 aagac 7059595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 51 - 177
Target Start/End: Original strand, 35945798 - 35945924
Alignment:
Q  51 tctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaat 150  Q
    ||||||||| ||||||||||||| ||||| | |||||| ||||  ||||||  |||  ||||||||||||||| ||||||||||||||||||| |||| |    
T  35945798 tctagaagtcctagctcaactggtaaatgccgaaattgtaaggctggacgttgtgacctgggttcgaacccggaacctcacagttgtgtgtgaatttatt 35945897  T
Q  151 ttatgtggattacgacttcatctaaga 177  Q
    ||  ||||||||| |||||||||||||    
T  35945898 ttcagtggattaccacttcatctaaga 35945924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 49 - 178
Target Start/End: Original strand, 13109769 - 13109898
Alignment:
Q  49 agtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagttta 148  Q
    |||||||||||||||||| ||||| ||||||   |||||||||||||||||||| | |   |  ||||||||  | ||||||||||||||||||||||||    
T  13109769 agtctagaagttctagcttaactgacaaatgattaaattgcaaggtcggacgtcgtaacccgaattcgaacctagaacctcacagttgtgtgtgagttta 13109868  T
Q  149 atttatgtggattacgacttcatctaagac 178  Q
    ||||  ||||||||| ||||||||||||||    
T  13109869 atttcagtggattaccacttcatctaagac 13109898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 53 - 142
Target Start/End: Original strand, 29587255 - 29587344
Alignment:
Q  53 tagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtg 142  Q
    ||||||| ||||||||||||||||||| | ||||||||||| |||||||| |||  |||||||||||||||||||||||| |||||||||    
T  29587255 tagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcgtgacctgggttcgaacccgggacctcacaattgtgtgtg 29587344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 50 - 175
Target Start/End: Original strand, 39284290 - 39284415
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    ||||||||||  ||||||||||| | |||||  |||||| ||||||||||||| ||||  |||||||||||   |||||||||||||| |||||||||||    
T  39284290 gtctagaagtcatagctcaactgacgaatgttgaaattgtaaggtcggacgtcgtgattcgggttcgaacctaagacctcacagttgtatgtgagtttaa 39284389  T
Q  150 tttatgtggattacgacttcatctaa 175  Q
    ||| |||||||||| | |||||||||    
T  39284390 tttttgtggattactatttcatctaa 39284415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 51 - 178
Target Start/End: Original strand, 5943682 - 5943809
Alignment:
Q  51 tctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaat 150  Q
    ||||||| | |||||||||||| |||||| | ||||||||||| |||||||| |||   |||||||||| | ||||||||||||||| ||||||||||||    
T  5943682 tctagaattcctagctcaactgacaaatgccgaaattgcaaggccggacgtcgtgacccgggttcgaactcaggacctcacagttgtttgtgagtttaat 5943781  T
Q  151 ttatgtggattacgacttcatctaagac 178  Q
    ||   |||||||  ||||||||||||||    
T  5943782 ttcaatggattatcacttcatctaagac 5943809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 65 - 175
Target Start/End: Original strand, 7275696 - 7275806
Alignment:
Q  65 ctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaatttatgtggattacg 164  Q
    ||||||||||||||||| |||||| |||||||||||| ||||   || ||||||||||| || |||||||||||| ||||||||||||  |||| ||||     
T  7275696 ctcaactggcaaatgtcgaaattgtaaggtcggacgttatgactcggattcgaacccggaacttcacagttgtgtatgagtttaatttcagtggtttacc 7275795  T
Q  165 acttcatctaa 175  Q
    |||||||||||    
T  7275796 acttcatctaa 7275806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 52 - 177
Target Start/End: Original strand, 21938944 - 21939069
Alignment:
Q  52 ctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaatt 151  Q
    |||||||| ||||||||||||| ||||| | |||||| |||| |||| ||||||||  || |||||| || |||||||||||||||||| ||||||||||    
T  21938944 ctagaagtcctagctcaactggtaaatgccgaaattgtaaggccggatgtcatgatccggattcgaatccaggacctcacagttgtgtgcgagtttaatt 21939043  T
Q  152 tatgtggattacgacttcatctaaga 177  Q
    |  | || |||| |||||||||||||    
T  21939044 tcagcggtttaccacttcatctaaga 21939069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 50 - 151
Target Start/End: Complemental strand, 46447505 - 46447404
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    ||||||||||||||| |||||||||||||| | |||||||||||   |||||| | |   |||||||||||||||||||||||||| |||||||||||||    
T  46447505 gtctagaagttctagttcaactggcaaatgccgaaattgcaaggctcgacgtcgtaacccgggttcgaacccgggacctcacagttatgtgtgagtttaa 46447406  T
Q  150 tt 151  Q
    ||    
T  46447405 tt 46447404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 110 - 178
Target Start/End: Complemental strand, 41039371 - 41039303
Alignment:
Q  110 gggttcgaacccgggacctcacagttgtgtgtgagtttaatttatgtggattacgacttcatctaagac 178  Q
    ||||||||||||||||||||||||||||||||||||||| |||  ||||||||| ||||||||||||||    
T  41039371 gggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac 41039303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 50 - 175
Target Start/End: Complemental strand, 2089033 - 2088908
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| |||||||||||||||||| || |||||| |||||| ||| || |||   |||||||||| | | |||||||| |||| |||||||| ||    
T  2089033 gtctagaagtcctagctcaactggcaaatatcgaaattgtaaggtcagacatcgtgactcgggttcgaactcagaacctcacaattgtatgtgagttcaa 2088934  T
Q  150 tttatgtggattacgacttcatctaa 175  Q
    |||  ||||||||| |||||||||||    
T  2088933 tttcagtggattaccacttcatctaa 2088908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 62 - 148
Target Start/End: Complemental strand, 16770272 - 16770186
Alignment:
Q  62 tagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagttta 148  Q
    |||||||||||||||||| | |||||| |||||||||||||||| |  | |||| || | |||||||||||||||||||||||||||    
T  16770272 tagctcaactggcaaatgccgaaattgtaaggtcggacgtcatggttcgagttcaaatctgggacctcacagttgtgtgtgagttta 16770186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 178
Target Start/End: Original strand, 778578 - 778702
Alignment:
Q  53 tagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaattt 152  Q
    ||||||||||||||||||||| ||||| | || || |||||||| ||||| |||    ||||||||||  |||||| |||||||||||||||||||||||    
T  778578 tagaagttctagctcaactggaaaatgccgaa-ttacaaggtcgaacgtcgtgactcaggttcgaacctaggacctgacagttgtgtgtgagtttaattt 778676  T
Q  153 atgtggattacgacttcatctaagac 178  Q
      ||| ||||| | ||||||||||||    
T  778677 cagtgaattaccaattcatctaagac 778702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 50 - 178
Target Start/End: Original strand, 26032798 - 26032929
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcgg---acgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtt 146  Q
    |||||||||| |||  ||||||| |||||| | |||||| ||||||||   ||||| |||   ||||||||||| || ||||||||||| ||||||||||    
T  26032798 gtctagaagtcctaattcaactgacaaatgccgaaattgtaaggtcggcggacgtcgtgacccgggttcgaacctggaacctcacagttttgtgtgagtt 26032897  T
Q  147 taatttatgtggattacgacttcatctaagac 178  Q
    ||||||  |||||||||  |||||||||||||    
T  26032898 taatttcagtggattaccgcttcatctaagac 26032929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 97 - 178
Target Start/End: Complemental strand, 35110180 - 35110099
Alignment:
Q  97 gacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaatttatgtggattacgacttcatctaagac 178  Q
    ||||||||||   |||||||||||| |||||| |||||||||||||||||||||||  | ||||||| ||||||||||||||    
T  35110180 gacgtcatgacccgggttcgaacccaggaccttacagttgtgtgtgagtttaatttgagaggattaccacttcatctaagac 35110099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 66 - 140
Target Start/End: Original strand, 35224356 - 35224430
Alignment:
Q  66 tcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtg 140  Q
    ||||||||||||||  |||| ||||||| ||||||||||||   |||||||||||| ||||||||||||||||||    
T  35224356 tcaactggcaaatgcgaaaaatgcaaggccggacgtcatgacccgggttcgaacccaggacctcacagttgtgtg 35224430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 136
Target Start/End: Original strand, 47111469 - 47111543
Alignment:
Q  62 tagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttg 136  Q
    ||||||||||| |||||| | |||||||||||||||||||| |||  |||||| |||||| ||||||| ||||||    
T  47111469 tagctcaactgacaaatgccgaaattgcaaggtcggacgtcgtgacctgggtttgaacccaggacctcgcagttg 47111543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 178
Target Start/End: Original strand, 13097339 - 13097432
Alignment:
Q  85 attgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaatttatgtggattacgacttcatctaagac 178  Q
    |||||||||||||||||| |||   || ||| ||||  | ||||||||||||| ||||||||||||||   |||||||| ||||||||||||||    
T  13097339 attgcaaggtcggacgtcgtgacccggattcaaacctagaacctcacagttgtatgtgagtttaattttattggattaccacttcatctaagac 13097432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 110 - 174
Target Start/End: Complemental strand, 50106264 - 50106200
Alignment:
Q  110 gggttcgaacccgggacctcacagttgtgtgtgagtttaatttatgtggattacgacttcatcta 174  Q
    |||||||||||||||||||||||||| |||||||||||| |||  ||||||| | | ||||||||    
T  50106264 gggttcgaacccgggacctcacagttatgtgtgagtttattttcagtggattgccatttcatcta 50106200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 152
Target Start/End: Original strand, 3716636 - 3716713
Alignment:
Q  75 aaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaattt 152  Q
    ||||||| ||||||||||| || ||||||||||  || ||  ||| | | ||||||||||||||||||||||||||||    
T  3716636 aaatgtcgaaattgcaaggccgaacgtcatgatccggatttaaactcagaacctcacagttgtgtgtgagtttaattt 3716713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 178
Target Start/End: Original strand, 4065961 - 4066089
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||  |||||||||||| |||||  | ||||||||||   | ||||  ||||  ||||||||| | | ||||| ||| |||| |||||||||||    
T  4065961 gtctagaagacctagctcaactgacaaataccgaaattgcaagactgaacgttgtgatccgggttcgaatctgagaccttacaattgtatgtgagtttaa 4066060  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  ||| ||||| ||||||||||||||    
T  4066061 tttcagtgaattaccacttcatctaagac 4066089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 178
Target Start/End: Original strand, 3716424 - 3716490
Alignment:
Q  112 gttcgaacccgggacctcacagttgtgtgtgagtttaatttatgtggattacgacttcatctaagac 178  Q
    ||||||||| | ||||||||||||||||||||||||| |||  |||||||   ||||||||| ||||    
T  3716424 gttcgaacctgagacctcacagttgtgtgtgagtttatttttagtggattgtcacttcatcttagac 3716490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 152
Target Start/End: Complemental strand, 38817303 - 38817225
Alignment:
Q  74 caaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaattt 152  Q
    |||||||| | |||| |||  |||||||| ||||  | ||||||||||| ||||||||| |||||||||| ||||||||    
T  38817303 caaatgtcgatattgaaagaccggacgtcgtgatccgagttcgaacccgagacctcacaattgtgtgtgaatttaattt 38817225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 128 - 177
Target Start/End: Complemental strand, 32982400 - 32982351
Alignment:
Q  128 tcacagttgtgtgtgagtttaatttatgtggattacgacttcatctaaga 177  Q
    |||||||||||||||||||| ||||  |||| |||| |||||||||||||    
T  32982400 tcacagttgtgtgtgagtttgatttcagtggtttactacttcatctaaga 32982351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 175
Target Start/End: Complemental strand, 13183271 - 13183179
Alignment:
Q  83 aaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaatttatgtggattacgacttcatctaa 175  Q
    ||||||||||||||||| || | ||  | ||| |||||  | |||| |||||||| ||||||||||||||  ||| ||||| |||||||||||    
T  13183271 aaattgcaaggtcggacatcgtaatccgagtttgaacctagaaccttacagttgtatgtgagtttaatttcagtgaattaccacttcatctaa 13183179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 26264589 - 26264537
Alignment:
Q  125 acctcacagttgtgtgtgagtttaatttatgtggattacgacttcatctaaga 177  Q
    ||||||||||||||||||||||||||||   || ||||  |||||||||||||    
T  26264589 acctcacagttgtgtgtgagtttaatttcaatgtattatcacttcatctaaga 26264537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 121
Target Start/End: Complemental strand, 44836242 - 44836175
Alignment:
Q  56 aagttctagctcaactggcaaa--tgtcaaaattgcaaggtcggacgtcatgatatgggttcgaaccc 121  Q
    |||| ||||| |||||||||||  | |||||||||  |||||||||||||||||  ||||||||||||    
T  44836242 aagtcctagcacaactggcaaaaatatcaaaattgttaggtcggacgtcatgatcggggttcgaaccc 44836175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 106
Target Start/End: Original strand, 45294658 - 45294714
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatga 106  Q
    |||||||||| ||||||||||| ||||||| | ||||||||||  ||||| ||||||    
T  45294658 gtctagaagtcctagctcaactagcaaatgccgaaattgcaagaccggacatcatga 45294714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1348 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold1348
Description:

Target: scaffold1348; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 50 - 178
Target Start/End: Complemental strand, 990 - 862
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| ||||||||||||||||||| | ||||||||||| ||||||||||||   |||||||||||||||||||||||||||||||||||||||     
T  990 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttat 891  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  ||||||||| ||||||||||||||    
T  890 tttcagtggattaccacttcatctaagac 862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 85; Significance: 1e-40; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 50 - 178
Target Start/End: Complemental strand, 25112375 - 25112247
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| ||||||||||||||||||  | ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||||     
T  25112375 gtctagaagtcctagctcaactggcaaataccgaaattgcaaggtcggacgtcatgacctgggttcgaacccgggacctcacagttgtgtgtgggtttat 25112276  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  ||||||||| ||||||||||||||    
T  25112275 tttcagtggattaccacttcatctaagac 25112247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 49 - 178
Target Start/End: Original strand, 11355822 - 11355951
Alignment:
Q  49 agtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagttta 148  Q
    |||||||||||||||| ||||||  |||||| | ||||||||||||||||||| ||||| ||| ||||||||||||| ||||||||||||||||||||||    
T  11355822 agtctagaagttctagttcaactaacaaatgccgaaattgcaaggtcggacgttatgatctggattcgaacccgggatctcacagttgtgtgtgagttta 11355921  T
Q  149 atttatgtggattacgacttcatctaagac 178  Q
    ||||  ||||||||| ||||||||||||||    
T  11355922 atttcagtggattaccacttcatctaagac 11355951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 50 - 178
Target Start/End: Original strand, 4106738 - 4106866
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| ||||| ||||||||||||| | ||||||||||| ||||||||||||   |||||||||||||||||||||||||||||||||||||||     
T  4106738 gtctagaagtcctagcccaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttat 4106837  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  ||||||||| ||||||||||||||    
T  4106838 tttcagtggattaccacttcatctaagac 4106866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 50 - 178
Target Start/End: Complemental strand, 31770660 - 31770532
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| ||||||||||||||||||| | ||||||||||| |||| |||||||   |||||||||||||||||||||||||||||||||||||||     
T  31770660 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggatgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttat 31770561  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  ||||||||| ||||||||||||||    
T  31770560 tttcagtggattaccacttcatctaagac 31770532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 50 - 175
Target Start/End: Original strand, 44083940 - 44084065
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| ||||||||||||||||||| ||||||||||||| |||||||  |||   |||||||||||||||||||||||||||||||||||||||     
T  44083940 gtctagaagtcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtgacccgggttcgaacccgggacctcacagttgtgtgtgagtttat 44084039  T
Q  150 tttatgtggattacgacttcatctaa 175  Q
    |||  ||||||||| |||||||||||    
T  44084040 tttcagtggattaccacttcatctaa 44084065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 50 - 178
Target Start/End: Complemental strand, 25546403 - 25546275
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| ||||||||||||| ||||| | ||||||||||| ||||||||||||   ||||||||| ||||||||||||||||||||||||||||||    
T  25546403 gtctagaagtcctagctcaactggtaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaatccgggacctcacagttgtgtgtgagtttaa 25546304  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  |||| |||| ||||||||||||||    
T  25546303 tttcagtggtttaccacttcatctaagac 25546275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 49 - 178
Target Start/End: Original strand, 40058237 - 40058366
Alignment:
Q  49 agtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagttta 148  Q
    ||||||||||| ||| ||||||||||||||| ||||||||||||| |||||||  |||   |||||||||||||||||||||||||||||| ||||||||    
T  40058237 agtctagaagtcctaactcaactggcaaatgccaaaattgcaaggccggacgttgtgacccgggttcgaacccgggacctcacagttgtgtatgagttta 40058336  T
Q  149 atttatgtggattacgacttcatctaagac 178  Q
     |||  ||||||||| ||||||||||||||    
T  40058337 ttttcagtggattaccacttcatctaagac 40058366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 50 - 178
Target Start/End: Original strand, 23358185 - 23358313
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| ||||||||||||||||||  | ||||||||||| |||||||| | |   |||||||||||||||||||||||||||||||||||||||     
T  23358185 gtctagaagtcctagctcaactggcaaataccgaaattgcaaggccggacgtcgtaacccgggttcgaacccgggacctcacagttgtgtgtgagtttat 23358284  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  ||||||||| ||||||||||||||    
T  23358285 tttcagtggattaccacttcatctaagac 23358313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 65 - 178
Target Start/End: Original strand, 4107324 - 4107437
Alignment:
Q  65 ctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaatttatgtggattacg 164  Q
    ||||||||||||||| | ||||||||||| ||||||||| ||   ||||||||||||||||||||||||||||||||||||||| |||  |||||||||     
T  4107324 ctcaactggcaaatgccgaaattgcaaggccggacgtcacgacccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattacc 4107423  T
Q  165 acttcatctaagac 178  Q
    ||||||||||||||    
T  4107424 acttcatctaagac 4107437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 61 - 178
Target Start/End: Complemental strand, 29484872 - 29484755
Alignment:
Q  61 ctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaatttatgtggat 160  Q
    ||||||||||||||||||| | ||||||||||| ||||||||||||| |||||| ||||||||||||||||| |||| ||||||||||||||  ||||||    
T  29484872 ctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgatctgggtttgaacccgggacctcacaattgtatgtgagtttaatttcagtggat 29484773  T
Q  161 tacgacttcatctaagac 178  Q
    ||  ||||||| ||||||    
T  29484772 tatcacttcatataagac 29484755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 51 - 178
Target Start/End: Complemental strand, 47250378 - 47250251
Alignment:
Q  51 tctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaat 150  Q
    ||||||||| ||||||||||||||||||| | ||||||||||| ||||||||||||   ||||||||||| |||| |||  ||||||||||||||||| |    
T  47250378 tctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacctgggatctcttagttgtgtgtgagtttatt 47250279  T
Q  151 ttatgtggattacgacttcatctaagac 178  Q
    ||  ||||||||| ||||||||||||||    
T  47250278 ttcagtggattaccacttcatctaagac 47250251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 53 - 178
Target Start/End: Original strand, 8439081 - 8439206
Alignment:
Q  53 tagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaattt 152  Q
    ||||||| |||| |||||||||||||| |||||||||||||||||||||  |||   || ||||||||| ||||||||||||||||||||| |||| |||    
T  8439081 tagaagtcctagttcaactggcaaatgccaaaattgcaaggtcggacgttgtgacccggattcgaacccaggacctcacagttgtgtgtgaatttatttt 8439180  T
Q  153 atgtggattacgacttcatctaagac 178  Q
      ||||||||| ||||||||||||||    
T  8439181 cagtggattaccacttcatctaagac 8439206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 56 - 171
Target Start/End: Complemental strand, 27229600 - 27229484
Alignment:
Q  56 aagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgag-tttaatttat 154  Q
    |||| ||| |||||||| |||||||| ||||||||||| |||||||| |||  |||||||||||||||||||||||||||||||||||| ||||||||      
T  27229600 aagtcctaactcaactgacaaatgtcgaaattgcaaggccggacgtcgtgacctgggttcgaacccgggacctcacagttgtgtgtgagttttaatttca 27229501  T
Q  155 gtggattacgacttcat 171  Q
    ||||||||| |||||||    
T  27229500 gtggattaccacttcat 27229484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 54 - 177
Target Start/End: Complemental strand, 43753878 - 43753754
Alignment:
Q  54 agaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgag-tttaattt 152  Q
    |||||| |||| |||||||||||||| | ||||||||||| |||||||| |||  ||||||||||||||| ||||||||||||| |||||| ||||||||    
T  43753878 agaagtcctagttcaactggcaaatgccgaaattgcaaggccggacgtcgtgacctgggttcgaacccggaacctcacagttgtatgtgagttttaattt 43753779  T
Q  153 atgtggattacgacttcatctaaga 177  Q
      ||||||||| |||||||||||||    
T  43753778 cagtggattaccacttcatctaaga 43753754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 50 - 178
Target Start/End: Original strand, 47557781 - 47557909
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| ||| ||||||||| ||||| | ||||| |||||||| |||||||||   |||||||||||||| ||||||||||||| |||||||||||    
T  47557781 gtctagaagtcctaactcaactggtaaatgccgaaattacaaggtcgcacgtcatgacccgggttcgaacccggaacctcacagttgtatgtgagtttaa 47557880  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  |||| |||| ||||||||||||||    
T  47557881 tttcagtggtttaccacttcatctaagac 47557909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 50 - 152
Target Start/End: Original strand, 46427360 - 46427462
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    ||||| ||||||||||||||||| ||||| ||||||||||||||| |||||||||||   || |||||| |||| |||||||||||||||||||||||||    
T  46427360 gtctaaaagttctagctcaactgacaaatatcaaaattgcaaggttggacgtcatgactcggattcgaatccggaacctcacagttgtgtgtgagtttaa 46427459  T
Q  150 ttt 152  Q
    |||    
T  46427460 ttt 46427462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 50 - 178
Target Start/End: Original strand, 2146636 - 2146764
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| ||||||||||||| ||||| | ||||||||||| |||||||  |||   ||||||||||||  ||||||||||||||||||| |||||     
T  2146636 gtctagaagtcctagctcaactggaaaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacccaagacctcacagttgtgtgtgggtttat 2146735  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  ||||||||| ||||||||||||||    
T  2146736 tttcagtggattaccacttcatctaagac 2146764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 50 - 174
Target Start/End: Original strand, 38033729 - 38033853
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||||||| ||||||||||||||| | |||||| |||||||||| |  ||||  |||||| || |||||||||||||||||||||||||||||     
T  38033729 gtctagaagttctaactcaactggcaaatgccgaaattgtaaggtcggacattgtgatccgggttcaaatccgggacctcacagttgtgtgtgagtttat 38033828  T
Q  150 tttatgtggattacgacttcatcta 174  Q
    |||  ||||| ||| ||||||||||    
T  38033829 tttcagtggagtaccacttcatcta 38033853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 83 - 178
Target Start/End: Complemental strand, 47570813 - 47570718
Alignment:
Q  83 aaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaatttatgtggattacgacttcatctaagac 178  Q
    ||||||||||| ||||||||||||   |||||||||||||||| |||||||||||||||||||||| |||  ||||||||| ||||||||||||||    
T  47570813 aaattgcaaggccggacgtcatgacccgggttcgaacccgggatctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac 47570718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 49 - 151
Target Start/End: Original strand, 29255716 - 29255817
Alignment:
Q  49 agtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagttta 148  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| ||||||| ||||  |||||||||||| ||| || |||||| || |||||||||    
T  29255716 agtctagaagttctagctcaactggcaaatgccaaaattgcaaggttggacgtcgtgatccgggttcgaacccaggatcttacagtt-tgcgtgagttta 29255814  T
Q  149 att 151  Q
    |||    
T  29255815 att 29255817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 50 - 178
Target Start/End: Complemental strand, 10220600 - 10220473
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| ||| ||||||||||||| | |||||||| ||||  |||||||||||| |||||||||| |||  ||||||||||| |||||||||||||    
T  10220600 gtctagaagtcctaactcaactggcaaaagccaaaattgtaaggcaggacgtcatgatctgggttcgaatccgaaacctcacagttttgtgtgagtttaa 10220501  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  |||| |||| | ||||||||||||    
T  10220500 tttcagtggtttacca-ttcatctaagac 10220473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 51 - 178
Target Start/End: Original strand, 48146754 - 48146881
Alignment:
Q  51 tctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaat 150  Q
    |||||| |||||||||||||||  |||||   ||||||||||||| || ||| |||   ||||||||||||||||||||||||||||||||||||| | |    
T  48146754 tctagaggttctagctcaactgaaaaatgcagaaattgcaaggtcagatgtcgtgacccgggttcgaacccgggacctcacagttgtgtgtgagttaatt 48146853  T
Q  151 ttatgtggattacgacttcatctaagac 178  Q
    ||   |||||||| ||||||||||||||    
T  48146854 ttcattggattaccacttcatctaagac 48146881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 60 - 178
Target Start/End: Original strand, 5587290 - 5587408
Alignment:
Q  60 tctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaatttatgtgga 159  Q
    ||||||||||||| |||||| | ||||||||||  ||||| || ||||  |||||||||||| |||||||||| ||  |||||||||||||||  |||||    
T  5587290 tctagctcaactgacaaatgccgaaattgcaagtccggacatcgtgatccgggttcgaacccaggacctcacatttacgtgtgagtttaattttagtgga 5587389  T
Q  160 ttacgacttcatctaagac 178  Q
    |||| ||||||||||||||    
T  5587390 ttaccacttcatctaagac 5587408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 60 - 178
Target Start/End: Original strand, 5592251 - 5592369
Alignment:
Q  60 tctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaatttatgtgga 159  Q
    ||||||||||||| |||||| | ||||||||||  ||||| || ||||  |||||||||||| |||||||||| ||  |||||||||||||||  |||||    
T  5592251 tctagctcaactgacaaatgccgaaattgcaagtccggacatcgtgatccgggttcgaacccaggacctcacatttacgtgtgagtttaattttagtgga 5592350  T
Q  160 ttacgacttcatctaagac 178  Q
    |||| ||||||||||||||    
T  5592351 ttaccacttcatctaagac 5592369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 50 - 152
Target Start/End: Complemental strand, 47961083 - 47960981
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    ||||||||||  || ||||||| ||||||| ||||||| ||||||| ||||||||||   ||||||||||||||||||||  ||||||||||||||||||    
T  47961083 gtctagaagtcttaactcaacttgcaaatgccaaaattacaaggtcagacgtcatgaaccgggttcgaacccgggacctcgtagttgtgtgtgagtttaa 47960984  T
Q  150 ttt 152  Q
    |||    
T  47960983 ttt 47960981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 50 - 178
Target Start/End: Complemental strand, 48444280 - 48444152
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| ||||||||||||  ||||| | |||||| |||   ||||||| |||| ||||||||||||| | || |||||||||||||| |||||||    
T  48444280 gtctagaagtcctagctcaactgaaaaatgccgaaattgtaagactggacgtcgtgatctgggttcgaaccctgtacttcacagttgtgtgtaagtttaa 48444181  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  ||| ||||| ||||||||||||||    
T  48444180 tttcagtgaattaccacttcatctaagac 48444152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 68 - 178
Target Start/End: Original strand, 41183833 - 41183943
Alignment:
Q  68 aactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaatttatgtggattacgact 167  Q
    |||||||||||| | ||||||||||| |||||||| |||  |||||||||||||   ||||||||||| |||||||||||| |||  ||||||||  |||    
T  41183833 aactggcaaatgccgaaattgcaaggccggacgtcttgacctgggttcgaacccaatacctcacagttatgtgtgagtttattttcagtggattatcact 41183932  T
Q  168 tcatctaagac 178  Q
    |||||||||||    
T  41183933 tcatctaagac 41183943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 50 - 178
Target Start/End: Complemental strand, 7162916 - 7162790
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    ||||| |||| ||||||||||||||||||| | |||||| |||| |||||||  |||   |||||||||| |||||||||||| |  ||||||||||||     
T  7162916 gtctaaaagtcctagctcaactggcaaatgccgaaattgtaaggccggacgttgtgacccgggttcgaactcgggacctcacaat--tgtgtgagtttat 7162819  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  ||||||||| ||||||||||||||    
T  7162818 tttcagtggattaccacttcatctaagac 7162790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 65 - 178
Target Start/End: Original strand, 28603026 - 28603139
Alignment:
Q  65 ctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaatttatgtggattacg 164  Q
    ||||||||||||||| | |||| |||||| |||||||| |||  || ||||||||||| ||| ||||| |||| |||||||||||| |  |||||||||     
T  28603026 ctcaactggcaaatgccgaaatcgcaaggccggacgtcgtgacctgagttcgaacccgagacttcacaattgtatgtgagtttaatctcagtggattacc 28603125  T
Q  165 acttcatctaagac 178  Q
    ||||||||||||||    
T  28603126 acttcatctaagac 28603139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 113 - 178
Target Start/End: Complemental strand, 38781273 - 38781208
Alignment:
Q  113 ttcgaacccgggacctcacagttgtgtgtgagtttaatttatgtggattacgacttcatctaagac 178  Q
    |||||||||||||||||||||||||||||||||||| |||  ||||||||| ||||||||||||||    
T  38781273 ttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac 38781208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 50 - 178
Target Start/End: Complemental strand, 5772947 - 5772819
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    ||||||||||  ||||||||| |||||||| | |||||||||||||||||    |||   |||||||||| ||  |||||||||||||||||||||||||    
T  5772947 gtctagaagtcttagctcaacgggcaaatgccgaaattgcaaggtcggacaatgtgacccgggttcgaactcgaaacctcacagttgtgtgtgagtttaa 5772848  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  |||| |||| ||||||| ||||||    
T  5772847 tttcagtggtttaccacttcatttaagac 5772819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 51 - 178
Target Start/End: Complemental strand, 42081743 - 42081619
Alignment:
Q  51 tctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaat 150  Q
    ||||||||| |||||||| ||||||||||||||||||||||| ||| ||||  ||||  ||||||||| || ||||||||||||  |||||||||||| |    
T  42081743 tctagaagtcctagctcagctggcaaatgtcaaaattgcaagatcgaacgttgtgatccgggttcgaa-cctggacctcacagt--tgtgtgagtttatt 42081647  T
Q  151 ttatgtggattacgacttcatctaagac 178  Q
    ||  ||| ||||| |||| |||||||||    
T  42081646 ttcagtgaattaccactttatctaagac 42081619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 83 - 178
Target Start/End: Complemental strand, 39514078 - 39513983
Alignment:
Q  83 aaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaatttatgtggattacgacttcatctaagac 178  Q
    ||||||||||| |||||||| |||   | ||||||||||||||||| |||||| ||||||||||||||||  ||||||||| ||||||||| ||||    
T  39514078 aaattgcaaggccggacgtcgtgacccgagttcgaacccgggaccttacagttatgtgtgagtttaatttcggtggattaccacttcatctgagac 39513983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 49 - 175
Target Start/End: Complemental strand, 15635008 - 15634882
Alignment:
Q  49 agtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagttta 148  Q
    |||||||||||  |||||||||| ||||||| | |||||| || |||||||||| |||   || |||||| |||| || |||||||||||||||||||||    
T  15635008 agtctagaagtcatagctcaactagcaaatgccgaaattgtaaagtcggacgtcgtgacccggattcgaaaccggaacttcacagttgtgtgtgagttta 15634909  T
Q  149 atttatgtggattacgacttcatctaa 175  Q
     |||  || |||||| |||||||||||    
T  15634908 ttttcagtagattaccacttcatctaa 15634882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 64 - 178
Target Start/End: Complemental strand, 31288338 - 31288224
Alignment:
Q  64 gctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaatttatgtggattac 163  Q
    |||||||||  |||||||||||| | |||||  || |||||||| |||||||||| | || | ||||||||||||||| ||||||||||  |||| ||||    
T  31288338 gctcaactgataaatgtcaaaatcgtaaggtatgatgtcatgatctgggttcgaatctggaatctcacagttgtgtgtaagtttaatttcagtggtttac 31288239  T
Q  164 gacttcatctaagac 178  Q
     ||||||||||||||    
T  31288238 cacttcatctaagac 31288224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 50 - 168
Target Start/End: Original strand, 34763454 - 34763560
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| ||||||||||||| ||||||| ||||||||||| |||||||| |||            |||||||||||||||||||||||||||||||    
T  34763454 gtctagaagtcctagctcaactggaaaatgtcgaaattgcaagggcggacgtcgtga------------cccgggacctcacagttgtgtgtgagtttaa 34763541  T
Q  150 tttatgtggattacgactt 168  Q
    |||  ||||||||| ||||    
T  34763542 tttcagtggattaccactt 34763560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 50 - 178
Target Start/End: Complemental strand, 32606458 - 32606330
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||||||| |||||||| |||||  | ||||||||||| |||||||| |||    |||||||||||| ||||| |||||| | ||||| |||||    
T  32606458 gtctagaagttctaactcaactgacaaataccgaaattgcaaggccggacgtcgtgacccaggttcgaacccgagaccttacagttttatgtgaatttaa 32606359  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  ||| ||||| | ||||||||||||    
T  32606358 tttcagtgaattaccaattcatctaagac 32606330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 50 - 173
Target Start/End: Complemental strand, 18506403 - 18506281
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| ||||| |||||   |||||| |||||||||||||||||  |||||||  | ||||||||||| ||| |||||| |||||||||||||||    
T  18506403 gtctagaagtcctagcacaactaaaaaatgttaaaattgcaaggtcggatatcatgatccgagttcgaacccgagacttcacag-tgtgtgtgagtttaa 18506305  T
Q  150 tttatgtggattacgacttcatct 173  Q
    |||  |||| ||||  ||||||||    
T  18506304 tttcagtggtttaccgcttcatct 18506281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 49 - 148
Target Start/End: Original strand, 43203305 - 43203404
Alignment:
Q  49 agtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagttta 148  Q
    ||||||||||| |||| | |||||||||||| | |||||| ||||  ||||| | |||   ||||||||||||||||||| |||||||||||||||||||    
T  43203305 agtctagaagtcctagatgaactggcaaatgccgaaattgtaaggcgggacgccgtgacccgggttcgaacccgggaccttacagttgtgtgtgagttta 43203404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 50 - 163
Target Start/End: Complemental strand, 25050086 - 25049973
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||||||| ||||||| | ||||| | |||||| |||||| |||||| |||  ||| || |||| |  || ||||||||||| |||||||||||    
T  25050086 gtctagaagttctaactcaactagaaaatgccgaaattgaaaggtcagacgtcgtgacctggatttgaactcatgatctcacagttgtatgtgagtttaa 25049987  T
Q  150 tttatgtggattac 163  Q
    |||| |||||||||    
T  25049986 tttaagtggattac 25049973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 49 - 178
Target Start/End: Original strand, 25872762 - 25872891
Alignment:
Q  49 agtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagttta 148  Q
    ||||||||||| ||| ||||| ||||||||| | | ||| |||||||||||||| ||||   ||||||||||   ||||| ||| |||||| ||||||||    
T  25872762 agtctagaagtcctaactcaattggcaaatgccgatattacaaggtcggacgtcgtgatccaggttcgaacctatgaccttacaattgtgtatgagttta 25872861  T
Q  149 atttatgtggattacgacttcatctaagac 178  Q
     ||| ||||  |||| ||||||||||||||    
T  25872862 ttttctgtgatttaccacttcatctaagac 25872891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 50 - 178
Target Start/End: Complemental strand, 27915709 - 27915580
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatga-tatgggttcgaacccgggacctcacagttgtgtgtgagttta 148  Q
    |||||||||| ||| ||||||||| |||||   |||||||||||||||||||| |||   || |||||||||   || ||||||||||||| ||||||||    
T  27915709 gtctagaagtcctaactcaactggtaaatgctgaaattgcaaggtcggacgtcgtgaccttgagttcgaacctaagatctcacagttgtgtatgagttta 27915610  T
Q  149 atttatgtggattacgacttcatctaagac 178  Q
    ||||   || ||||| ||||||||||||||    
T  27915609 atttcaatgaattaccacttcatctaagac 27915580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 53 - 178
Target Start/End: Original strand, 35309854 - 35309982
Alignment:
Q  53 tagaagttctagctca---actggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    ||||||||||||||||   |||| |||| ||  |||||| |||| |||||||| |||  ||| |||||| |||||| |||||| ||||||| ||||||||    
T  35309854 tagaagttctagctcatcaactgacaaaagttgaaattgtaaggccggacgtcttgacctggtttcgaatccgggatctcacaattgtgtgcgagtttaa 35309953  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  |||| |||  ||||||||||||||    
T  35309954 tttcagtggtttatcacttcatctaagac 35309982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 67 - 178
Target Start/End: Complemental strand, 4001953 - 4001844
Alignment:
Q  67 caactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaatttatgtggattacgac 166  Q
    ||||||| ||||||| ||||||||||| |||| ||| |||   |||||||||| ||||||||| |||   ||||||||||||||||   ||| |||| ||    
T  4001953 caactggaaaatgtcgaaattgcaaggccggatgtcgtgacccgggttcgaactcgggacctctcag--ctgtgtgagtttaatttcaatggtttaccac 4001856  T
Q  167 ttcatctaagac 178  Q
    ||||||||||||    
T  4001855 ttcatctaagac 4001844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 19630718 - 19630668
Alignment:
Q  128 tcacagttgtgtgtgagtttaatttatgtggattacgacttcatctaagac 178  Q
    ||||||||||||||||||||| |||  ||||||||| ||||||||||||||    
T  19630718 tcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac 19630668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 49 - 178
Target Start/End: Original strand, 40657525 - 40657657
Alignment:
Q  49 agtctagaagttctagctc---aactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagt 145  Q
    ||||||||||||||||||    |||| | ||||||||||||| ||| |||| ||||||| |   | ||||||| | | ||||||| |||| |||| ||||    
T  40657525 agtctagaagttctagcttcttaactagtaaatgtcaaaattacaatgtcgaacgtcataactcgagttcgaatctgagacctcatagttatgtgcgagt 40657624  T
Q  146 ttaatttatgtggattacgacttcatctaagac 178  Q
    |||||||  ||||||||  ||||||||||||||    
T  40657625 ttaatttcagtggattatcacttcatctaagac 40657657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 178
Target Start/End: Complemental strand, 7298254 - 7298125
Alignment:
Q  49 agtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagttta 148  Q
    |||||||||||| |||||||||||  ||||| |||||||  ||||||||| ||| |||    | |||||||| | ||||||||| || | || |||||||    
T  7298254 agtctagaagttatagctcaactgataaatgccaaaattataaggtcggatgtcgtgacccagattcgaacctgagacctcacaattatatgagagttta 7298155  T
Q  149 atttatgtggattacgacttcatctaagac 178  Q
    ||||  || |||||| |||||||| |||||    
T  7298154 attttagtagattactacttcatccaagac 7298125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 175
Target Start/End: Complemental strand, 23036330 - 23036208
Alignment:
Q  51 tctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaat 150  Q
    |||| |||| |||| ||||||| ||||||||||||||  |||||||||||| ||||    | ||||||| | | ||||||||||  | ||||||||||||    
T  23036330 tctaaaagtcctagttcaactgacaaatgtcaaaattataaggtcggacgttatgactcagattcgaactcagaacctcacagt--tatgtgagtttaat 23036233  T
Q  151 ttatgtggattacgacttcatctaa 175  Q
    ||   |||||||| |||||||||||    
T  23036232 ttcaatggattaccacttcatctaa 23036208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 178
Target Start/End: Complemental strand, 35578001 - 35577876
Alignment:
Q  53 tagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaattt 152  Q
    |||||||| || ||||||| |||||||  ||||||  ||| ||||| ||| |||   | ||||||||||| ||| ||||| |||||||| ||||||||||    
T  35578001 tagaagttttaactcaactagcaaatgctaaaattttaagatcggatgtcgtgacccgagttcgaacccgagacttcacaattgtgtgtaagtttaattt 35577902  T
Q  153 atgtggattacgacttcatctaagac 178  Q
       |||||||| | ||||||||||||    
T  35577901 caatggattacaatttcatctaagac 35577876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 102
Target Start/End: Complemental strand, 25504059 - 25504007
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtc 102  Q
    ||||||||||| ||| ||||||| |||||||||||||||||| | ||||||||    
T  25504059 gtctagaagttttagttcaactgacaaatgtcaaaattgcaaagccggacgtc 25504007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 65 - 163
Target Start/End: Original strand, 13887186 - 13887282
Alignment:
Q  65 ctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaatttatgtggattac 163  Q
    ||||||||||||||| | || |||||||  |||||||| |||    ||||||||||||| ||||||||||  ||| ||||||||||||  |||||||||    
T  13887186 ctcaactggcaaatgccgaacttgcaagaccggacgtcgtgacccaggttcgaacccggaacctcacagt--tgtatgagtttaatttcagtggattac 13887282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 152
Target Start/End: Complemental strand, 5463078 - 5462976
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    ||||||||||  || |||||||| |||||   |||||||||| || ||| ||  ||||  || |||||||| | || |||||||||||||||||||||||    
T  5463078 gtctagaagtcttaactcaactgacaaatactaaaattgcaatgttggatgttgtgatccggattcgaacctgagatctcacagttgtgtgtgagtttaa 5462979  T
Q  150 ttt 152  Q
    |||    
T  5462978 ttt 5462976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 50 - 99
Target Start/End: Complemental strand, 27737998 - 27737949
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggac 99  Q
    ||||| |||| ||| |||||||| ||||| ||||||||||||||||||||    
T  27737998 gtctataagtcctaactcaactgacaaatatcaaaattgcaaggtcggac 27737949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 104
Target Start/End: Original strand, 3838626 - 3838662
Alignment:
Q  68 aactggcaaatgtcaaaattgcaaggtcggacgtcat 104  Q
    ||||| ||||||||||||||||||||||| |||||||    
T  3838626 aactgacaaatgtcaaaattgcaaggtcgaacgtcat 3838662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 149
Target Start/End: Original strand, 34038491 - 34038587
Alignment:
Q  53 tagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    ||||||| ||| ||||| |  |||||| | |||||| ||||| |||||| ||||||||| ||||||||  | | |||| |||||| |||||||||||    
T  34038491 tagaagtcctaactcaattcacaaatgccgaaattgtaaggttggacgttatgatatggattcgaacctagaatctcaaagttgtatgtgagtttaa 34038587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 85; Significance: 1e-40; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 50 - 178
Target Start/End: Original strand, 33621494 - 33621622
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| ||||||||||||||||||| | ||||||||||| ||||||||||||   ||||||||||||||||||||||||||||||||||||||||    
T  33621494 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttaa 33621593  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  |||| |||| ||||||||||||||    
T  33621594 tttcagtggtttaccacttcatctaagac 33621622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 49 - 178
Target Start/End: Original strand, 4464126 - 4464255
Alignment:
Q  49 agtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagttta 148  Q
    |||||||||||||||| ||||||| |||||| | ||||||||||| |||||||||||||  ||||||||||| |||||||||||||||||||||||||||    
T  4464126 agtctagaagttctagttcaactgacaaatgccgaaattgcaaggccggacgtcatgatccgggttcgaacctgggacctcacagttgtgtgtgagttta 4464225  T
Q  149 atttatgtggattacgacttcatctaagac 178  Q
    ||||  |||| |||| ||||||||||||||    
T  4464226 atttcagtggtttaccacttcatctaagac 4464255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 50 - 178
Target Start/End: Original strand, 33704216 - 33704344
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| ||||||||||||||||||| | ||||||||||| ||||||||||||   |||||||||||||||||||||||||||||||||||||||     
T  33704216 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttat 33704315  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  ||||||||| ||||||| ||||||    
T  33704316 tttcagtggattaccacttcatttaagac 33704344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 48 - 178
Target Start/End: Original strand, 28322930 - 28323060
Alignment:
Q  48 cagtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagttt 147  Q
    |||||||||||| ||||||||||||||||||| | |||||| |||| |||||||||||||  ||||||||||||||||||||||| ||||||||||||||    
T  28322930 cagtctagaagtcctagctcaactggcaaatgccgaaattgtaaggccggacgtcatgatccgggttcgaacccgggacctcacaattgtgtgtgagttt 28323029  T
Q  148 aatttatgtggattacgacttcatctaagac 178  Q
    | |||  |||| |||| ||||||||||||||    
T  28323030 agtttcagtggtttaccacttcatctaagac 28323060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 43 - 178
Target Start/End: Original strand, 21000685 - 21000820
Alignment:
Q  43 attagcagtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtg 142  Q
    |||| |||||||||||| ||||||||||||||||||| | ||||||||||| || |||||||||  |||||||||||||||||||||||| |||||||||    
T  21000685 attaacagtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccgtacgtcatgacctgggttcgaacccgggacctcacaattgtgtgtg 21000784  T
Q  143 agtttaatttatgtggattacgacttcatctaagac 178  Q
     |||||||||  |||| |||| ||||||||| ||||    
T  21000785 ggtttaatttcagtggtttaccacttcatctgagac 21000820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 49 - 178
Target Start/End: Original strand, 21037290 - 21037418
Alignment:
Q  49 agtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagttta 148  Q
    |||||||||||||||||||||||||||||||   ||||||||||| |||||||  |||   ||||||||| || ||||||||||||||||||||||||||    
T  21037290 agtctagaagttctagctcaactggcaaatgctgaaattgcaaggccggacgttgtgactcgggttcgaatcc-ggacctcacagttgtgtgtgagttta 21037388  T
Q  149 atttatgtggattacgacttcatctaagac 178  Q
     |||  ||| ||||| ||||||||||||||    
T  21037389 ttttcagtgaattaccacttcatctaagac 21037418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 50 - 178
Target Start/End: Original strand, 361011 - 361139
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    ||||||||||  ||||||| |||||||||| ||||||||||||| || || || ||| | |||||||||||||| ||||||||||| | |||||||||||    
T  361011 gtctagaagtcttagctcatctggcaaatgccaaaattgcaaggccgaacatcgtgacacgggttcgaacccggaacctcacagttatatgtgagtttaa 361110  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  ||||||||  ||||||||||||||    
T  361111 tttcagtggattaacacttcatctaagac 361139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 50 - 178
Target Start/End: Original strand, 2959149 - 2959277
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| ||| ||||||| ||||||| | ||||||||||| ||||  || |||  | |||||||||||| ||||||||||||||||||||||||||    
T  2959149 gtctagaagtcctaactcaactagcaaatgccgaaattgcaaggccggatatcgtgacttaggttcgaacccgagacctcacagttgtgtgtgagtttaa 2959248  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  ||||| ||| ||||||||| ||||    
T  2959249 tttccgtggaataccacttcatcttagac 2959277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 49 - 178
Target Start/End: Complemental strand, 24619208 - 24619079
Alignment:
Q  49 agtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagttta 148  Q
    ||||||||||| ||| |||||||| ||||||||||||||| |||| || ||||| |||   | |||||| |||| ||||||| | |||||||||||||||    
T  24619208 agtctagaagtcctaactcaactgacaaatgtcaaaattgtaaggccgaacgtcgtgacccgagttcgatcccgtgacctcataattgtgtgtgagttta 24619109  T
Q  149 atttatgtggattacgacttcatctaagac 178  Q
    ||||  || |||||| ||||||||||||||    
T  24619108 atttcagtcgattaccacttcatctaagac 24619079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 49 - 178
Target Start/End: Complemental strand, 35218757 - 35218640
Alignment:
Q  49 agtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagttta 148  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||| |||||||  |||            ||||||||||||||||||||||||||||||    
T  35218757 agtctagaagtcctagctcaactggcaaatgccaaaattgcaaggccggacgttgtga------------cccgggacctcacagttgtgtgtgagttta 35218670  T
Q  149 atttatgtggattacgacttcatctaagac 178  Q
     |||  ||||||||| ||||||||||||||    
T  35218669 ttttcagtggattaccacttcatctaagac 35218640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 49 - 154
Target Start/End: Original strand, 11572007 - 11572112
Alignment:
Q  49 agtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagttta 148  Q
    ||||||||||| |||||||||||  ||||||   |||||| |||| | |||||| |||   |||||||||||||||||||||||||||||||||||||||    
T  11572007 agtctagaagtcctagctcaactaacaaatgcagaaattgtaaggccagacgtcgtgacccgggttcgaacccgggacctcacagttgtgtgtgagttta 11572106  T
Q  149 atttat 154  Q
     |||||    
T  11572107 ttttat 11572112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 178
Target Start/End: Original strand, 16518448 - 16518549
Alignment:
Q  75 aaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaatttatgtggattacgacttcatcta 174  Q
    ||||| |||||||||||||||||||||  |||  ||||||||||||| ||| ||||||||  |||||||||||| |||  ||||||||| | ||||||||    
T  16518448 aaatgccaaaattgcaaggtcggacgttgtgacctgggttcgaacccaggagctcacagt--tgtgtgagtttattttcagtggattaccatttcatcta 16518545  T
Q  175 agac 178  Q
    ||||    
T  16518546 agac 16518549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 116 - 178
Target Start/End: Original strand, 19145536 - 19145598
Alignment:
Q  116 gaacccgggacctcacagttgtgtgtgagtttaatttatgtggattacgacttcatctaagac 178  Q
    ||||||||||||||||| |||||||||| ||||||||  ||||||||| ||||||||||||||    
T  19145536 gaacccgggacctcacaattgtgtgtgaatttaatttcagtggattaccacttcatctaagac 19145598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 113 - 178
Target Start/End: Complemental strand, 29009715 - 29009650
Alignment:
Q  113 ttcgaacccgggacctcacagttgtgtgtgagtttaatttatgtggattacgacttcatctaagac 178  Q
    |||||||| ||||||||||||||||||||||||||| |||  ||| ||||| ||||||||||||||    
T  29009715 ttcgaacctgggacctcacagttgtgtgtgagtttatttttagtgaattaccacttcatctaagac 29009650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 177
Target Start/End: Original strand, 12252023 - 12252150
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| |||||||||||| |||||  | | ||||||||  |||| ||| |||   ||||| ||||||| ||||||| ||||||||||||||||||    
T  12252023 gtctagaagtcctagctcaactgacaaataccgagattgcaagaccggatgtcgtgaccagggtttgaacccgagacctcatagttgtgtgtgagtttaa 12252122  T
Q  150 tttatgtggattacgacttcatctaaga 177  Q
    |||   ||| |||| ||||||| |||||    
T  12252123 ttttaatggcttaccacttcatttaaga 12252150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 140
Target Start/End: Original strand, 33255488 - 33255578
Alignment:
Q  49 agtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtg 140  Q
    |||||| |||| |||||||| |||||||||| |||||||| ||||  ||||||  |||  || ||||||||| |||||||||||||||||||    
T  33255488 agtctataagtcctagctcagctggcaaatgccaaaattgtaaggctggacgtt-tgacctgagttcgaacctgggacctcacagttgtgtg 33255578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 49 - 148
Target Start/End: Original strand, 3057401 - 3057496
Alignment:
Q  49 agtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagttta 148  Q
    ||||||||||||||||||||| ||  ||||||| |||||| ||||  ||||||  ||||    |||||||||| |||  |||||||||||||||||||||    
T  3057401 agtctagaagttctagctcaattgataaatgtcgaaattgtaaggctggacgttgtgat----gttcgaacccaggatatcacagttgtgtgtgagttta 3057496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 130
Target Start/End: Complemental strand, 10226620 - 10226540
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctca 130  Q
    |||||||||| ||||||||||||||||||  | ||||| ||| |  |||| || ||| | |||||||||||||||||||||    
T  10226620 gtctagaagtcctagctcaactggcaaattccgaaattacaaagctggacttcgtgacacgggttcgaacccgggacctca 10226540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 140
Target Start/End: Complemental strand, 4610953 - 4610863
Alignment:
Q  49 agtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtg 140  Q
    |||||||||||||||||| |||| | |||||   |||||||| || | ||| ||||||   ||||||||||| |||||||||||||||||||    
T  4610953 agtctagaagttctagcttaactagaaaatgctgaaattgca-ggccagacatcatgacccgggttcgaacctgggacctcacagttgtgtg 4610863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 149
Target Start/End: Complemental strand, 17590430 - 17590391
Alignment:
Q  110 gggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    ||||||||||||||  ||||||||||||||||||||||||    
T  17590430 gggttcgaacccggagcctcacagttgtgtgtgagtttaa 17590391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 147
Target Start/End: Complemental strand, 31963847 - 31963765
Alignment:
Q  65 ctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagttt 147  Q
    ||||||||| ||||||  |||||| || || ||||||| ||||||| |||||||||||  |||||  |||| |||||||||||    
T  31963847 ctcaactggtaaatgttgaaattgtaaagttggacgtcgtgatatgagttcgaacccgaaacctcgtagttatgtgtgagttt 31963765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 62 - 107
Target Start/End: Complemental strand, 5598891 - 5598846
Alignment:
Q  62 tagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgat 107  Q
    ||||||||||| |||||||||||||||||||| | |||||| ||||    
T  5598891 tagctcaactgacaaatgtcaaaattgcaaggccagacgtcgtgat 5598846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 54 - 135
Target Start/End: Complemental strand, 7197930 - 7197849
Alignment:
Q  54 agaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagtt 135  Q
    |||||| ||||||||| || |||||| |||||||| || || ||||||| |||   | ||||||||||||||||| ||||||    
T  7197930 agaagtcctagctcaattgacaaatgccaaaattgtaaagttggacgtcttgacccgagttcgaacccgggaccttacagtt 7197849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 113 - 178
Target Start/End: Original strand, 22576244 - 22576309
Alignment:
Q  113 ttcgaacccgggacctcacagttgtgtgtgagtttaatttatgtggattacgacttcatctaagac 178  Q
    ||||||||||| ||||||||||| ||||||||||| ||||   || ||||| ||||| ||||||||    
T  22576244 ttcgaacccggaacctcacagttatgtgtgagtttgatttcattgtattaccacttcttctaagac 22576309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 148
Target Start/End: Original strand, 735448 - 735543
Alignment:
Q  54 agaagttctagctcaactggc-aaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaa-cccgggacctcacagttgtgtgtgagttta 148  Q
    ||||||||||||||||||||| ||||| | ||||||  ||| |||| | ||||||  ||||||||| ||||| ||||| || |||||||||||||||    
T  735448 agaagttctagctcaactggcaaaatgccgaaattgttaggccggatgccatgatcggggttcgaaccccggtacctc-cacttgtgtgtgagttta 735543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 246
Target Start/End: Complemental strand, 18672153 - 18672105
Alignment:
Q  198 attagcctatgtccagaaaggtgaacagactcaaccaccaaccatgata 246  Q
    ||||||||||| | || ||||||||| |||||| |||||||||||||||    
T  18672153 attagcctatgcctagtaaggtgaacggactcagccaccaaccatgata 18672105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 121
Target Start/End: Original strand, 21513075 - 21513143
Alignment:
Q  54 agaagttctagctcaactggc-aaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaaccc 121  Q
    |||||| |||||||||||||| ||||||| ||||||  ||| |||| ||||||||  ||||||||||||    
T  21513075 agaagtcctagctcaactggcaaaatgtcgaaattgttaggccggatgtcatgattggggttcgaaccc 21513143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 85; Significance: 1e-40; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 50 - 178
Target Start/End: Complemental strand, 35317825 - 35317697
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| ||||||||||||||||||| | ||||||||||||||||||| ||||  |||| |||||||||||||||||||||||||||||||||||     
T  35317825 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggtcggacgttatgacctggggtcgaacccgggacctcacagttgtgtgtgagtttat 35317726  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  ||||||||| ||||||||||||||    
T  35317725 tttcagtggattaccacttcatctaagac 35317697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 50 - 175
Target Start/End: Complemental strand, 1191668 - 1191543
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| ||||||||||||||||||| | ||||||||||| |||||||| ||||  ||||||||||||||||||||||| ||||||||||||||||    
T  1191668 gtctagaagtcctagctcaactggcaaatgacgaaattgcaaggccggacgtcgtgatccgggttcgaacccgggacctcacaattgtgtgtgagtttaa 1191569  T
Q  150 tttatgtggattacgacttcatctaa 175  Q
    |||  |||| |||| |||||||||||    
T  1191568 tttcagtggcttacaacttcatctaa 1191543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 50 - 178
Target Start/End: Original strand, 13203957 - 13204085
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| ||||||||||||||||||| | ||||||||||| |||||||| |||   |||||||||||||||||||||||||| ||||||||||||     
T  13203957 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcgtgacccgggttcgaacccgggacctcacagttatgtgtgagtttat 13204056  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  ||||||||| ||||||||||||||    
T  13204057 tttcagtggattaccacttcatctaagac 13204085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 50 - 178
Target Start/End: Original strand, 21018223 - 21018351
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| ||||||||||||||||||| ||||||||| ||| |||||||  |||   |||||||||||||||||||||||||||||||||||||||     
T  21018223 gtctagaagtcctagctcaactggcaaatgccaaaattgcgaggccggacgttgtgacccgggttcgaacccgggacctcacagttgtgtgtgagtttat 21018322  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  ||||||||| ||||||||||||||    
T  21018323 tttcagtggattaccacttcatctaagac 21018351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 51 - 178
Target Start/End: Complemental strand, 4825066 - 4824939
Alignment:
Q  51 tctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaat 150  Q
    ||||||||| ||||||||||||||||||| | ||||||||||| |||||||  |||    ||||| |||||||||||||||||||||||||||||||| |    
T  4825066 tctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgttgtgacccaggttcaaacccgggacctcacagttgtgtgtgagtttatt 4824967  T
Q  151 ttatgtggattacgacttcatctaagac 178  Q
    ||   |||||||| ||||||||||||||    
T  4824966 ttcaatggattaccacttcatctaagac 4824939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 49 - 178
Target Start/End: Original strand, 12257355 - 12257484
Alignment:
Q  49 agtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagttta 148  Q
    ||||||||||| ||||||||||||||||||| | |||||| |||| | |||||  |||  ||||||||||||| |||||||| | |||||||||||||||    
T  12257355 agtctagaagtcctagctcaactggcaaatgccgaaattgtaaggccagacgttgtgacctgggttcgaacccaggacctcataattgtgtgtgagttta 12257454  T
Q  149 atttatgtggattacgacttcatctaagac 178  Q
     |||  ||||||||| ||||||||||||||    
T  12257455 ttttcagtggattaccacttcatctaagac 12257484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 50 - 178
Target Start/End: Original strand, 2970984 - 2971112
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| ||||||||||||  ||||||| |||||| |||||| |||||  |||   ||||||||||| | |||||||||||||||||||||||||     
T  2970984 gtctagaagtcctagctcaactgataaatgtcgaaattgtaaggtcagacgttgtgacccgggttcgaacctgagacctcacagttgtgtgtgagtttat 2971083  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  ||||||||| ||||||||||||||    
T  2971084 tttcggtggattaccacttcatctaagac 2971112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 50 - 178
Target Start/End: Original strand, 11124652 - 11124780
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| ||||||||||||||||||||||||||||||||| |||||||| |||  | | ||||||||| | |||||| | || | |||| ||||||    
T  11124652 gtctagaagtcctagctcaactggcaaatgtcaaaattgcaaggccggacgtcgtgaccttgattcgaacccagaacctcataattttatgtgggtttaa 11124751  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  ||||||||| ||||||||||||||    
T  11124752 tttgagtggattaccacttcatctaagac 11124780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 50 - 169
Target Start/End: Original strand, 27721431 - 27721550
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| ||||||||||||| ||||| | ||||||||| |||||||||| |||   ||||| |||||||||||||||||||||| ||||| |||||    
T  27721431 gtctagaagtcctagctcaactggaaaatgccgaaattgcaaagtcggacgtcgtgacccgggtttgaacccgggacctcacagttgtatgtgaatttaa 27721530  T
Q  150 tttatgtggattacgacttc 169  Q
    |||  ||||||||| |||||    
T  27721531 tttcagtggattaccacttc 27721550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 83 - 178
Target Start/End: Complemental strand, 31909480 - 31909385
Alignment:
Q  83 aaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaatttatgtggattacgacttcatctaagac 178  Q
    ||||||||||| | ||||||||||   ||||||||||||||||||||||||||||||||||||||| |||  ||||||||| ||||||||||||||    
T  31909480 aaattgcaaggccagacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac 31909385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 50 - 152
Target Start/End: Complemental strand, 9577089 - 9576987
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| |||||||||||||||||||   ||||||||||| | ||||||||||  ||||||||||||| | ||||||||||||| |||||||||||    
T  9577089 gtctagaagtcctagctcaactggcaaatgctgaaattgcaaggccagacgtcatgacctgggttcgaacccagaacctcacagttgtatgtgagtttaa 9576990  T
Q  150 ttt 152  Q
    |||    
T  9576989 ttt 9576987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 48 - 178
Target Start/End: Original strand, 29265873 - 29266003
Alignment:
Q  48 cagtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagttt 147  Q
    |||||||||||| ||| ||||||| | ||||||| ||||| |||||||| | ||  |||   || |||||||||||||||||||||||||||||||||||    
T  29265873 cagtctagaagtcctaactcaactagaaaatgtcgaaattacaaggtcgaatgttgtgacccggattcgaacccgggacctcacagttgtgtgtgagttt 29265972  T
Q  148 aatttatgtggattacgacttcatctaagac 178  Q
    | |||  ||||||||| ||||||||||||||    
T  29265973 attttcagtggattaccacttcatctaagac 29266003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 51 - 175
Target Start/End: Complemental strand, 17984869 - 17984745
Alignment:
Q  51 tctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaat 150  Q
    ||||||||| ||||||||||||  ||| ||| |||||||||| | ||||||| |||   |||||||||||||| ||||||||||||||||||||||||||    
T  17984869 tctagaagtcctagctcaactgaaaaaggtcgaaattgcaagattggacgtcctgactcgggttcgaacccggaacctcacagttgtgtgtgagtttaat 17984770  T
Q  151 ttatgtggattacgacttcatctaa 175  Q
    ||  |||| |||  |||||||||||    
T  17984769 tttagtggcttatcacttcatctaa 17984745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 53 - 175
Target Start/End: Original strand, 6020995 - 6021117
Alignment:
Q  53 tagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaattt 152  Q
    ||||||| ||| ||||| ||||||||||||||||||||||| | |||||  |||   || ||||||||||||||||| |||||||||||||||||| |||    
T  6020995 tagaagtcctaactcaattggcaaatgtcaaaattgcaaggcctgacgttgtgacccggattcgaacccgggacctctcagttgtgtgtgagtttatttt 6021094  T
Q  153 atgtggattacgacttcatctaa 175  Q
      ||||||||| |||| ||||||    
T  6021095 cagtggattaccactttatctaa 6021117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 54 - 178
Target Start/End: Original strand, 8734000 - 8734125
Alignment:
Q  54 agaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgag-tttaattt 152  Q
    |||||| |||||||||||||||||||   ||||||||||| |||||||| |||  | ||||||||||||| |||||||||||||  ||||| ||||| ||    
T  8734000 agaagtcctagctcaactggcaaatgctgaaattgcaaggccggacgtcgtgacctaggttcgaacccggaacctcacagttgtacgtgagttttaactt 8734099  T
Q  153 atgtggattacgacttcatctaagac 178  Q
      ||||||||| ||||||||||||||    
T  8734100 cagtggattaccacttcatctaagac 8734125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 50 - 175
Target Start/End: Original strand, 40177624 - 40177749
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| |||||| ||||| |||||||| ||||||||||| |||||||  |||  ||| ||| ||||||| || |||| ||||||||||||||||     
T  40177624 gtctagaagtcctagcttaactgacaaatgtcgaaattgcaaggccggacgttgtgacctggattccaacccggaacttcaccgttgtgtgtgagtttat 40177723  T
Q  150 tttatgtggattacgacttcatctaa 175  Q
    |||  ||||||||| |||||||||||    
T  40177724 tttcagtggattaccacttcatctaa 40177749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 50 - 178
Target Start/End: Original strand, 21112049 - 21112177
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| |||||||| ||| |||||||| ||||||||||| |  ||||| |||  | |||||||||| ||||||||| |||||||| ||||||||     
T  21112049 gtctagaagtcctagctcagctgacaaatgtcgaaattgcaaggacatacgtcgtgacctaggttcgaacctgggacctcaaagttgtgtttgagtttat 21112148  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  ||||||||| || |||||||||||    
T  21112149 tttcagtggattaccacatcatctaagac 21112177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 50 - 178
Target Start/End: Original strand, 35545933 - 35546061
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||||||| |||||||| |||||| | |||||||||   || ||||| ||||  |  |||||||| |||||||||||||||| |||| ||||||    
T  35545933 gtctagaagttctaactcaactgacaaatgccgaaattgcaaaaccgaacgtcgtgatccgaattcgaacctgggacctcacagttgtatgtgggtttaa 35546032  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||| ||||||||  ||||||||||||||    
T  35546033 tttaagtggattatcacttcatctaagac 35546061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 50 - 178
Target Start/End: Original strand, 2786271 - 2786398
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| |||  |||| ||||||||| | |||||| ||||||||||| | ||||  |  ||| |||| |||||||||||||||||| |||||||||    
T  2786271 gtctagaagtcctaattcaattggcaaatgccgaaattgtaaggtcggacgccgtgatccgaattcaaacctgggacctcacagttgtgtatgagtttaa 2786370  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    || | ||||||||| ||||||||||||||    
T  2786371 ttca-gtggattaccacttcatctaagac 2786398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 49 - 178
Target Start/End: Complemental strand, 32143531 - 32143414
Alignment:
Q  49 agtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagttta 148  Q
    |||||||||||  |||||||||||||||||| ||||||||||||| |||||||  |||            ||||||||||||||||||||||||||||||    
T  32143531 agtctagaagtcatagctcaactggcaaatgccaaaattgcaaggccggacgttgtga------------cccgggacctcacagttgtgtgtgagttta 32143444  T
Q  149 atttatgtggattacgacttcatctaagac 178  Q
     |||  ||||||||| ||||||||||||||    
T  32143443 ttttcagtggattaccacttcatctaagac 32143414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 50 - 177
Target Start/End: Complemental strand, 3387028 - 3386894
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacc-------cgggacctcacagttgtgtgtg 142  Q
    ||||| |||| |||| |||||||||||||| | ||||||||||| |||||||| | ||  |||||||||||       ||| |||||| |||||||||||    
T  3387028 gtctaaaagtcctagttcaactggcaaatgccgaaattgcaaggccggacgtcgttatccgggttcgaacccggaagtcggaacctcaaagttgtgtgtg 3386929  T
Q  143 agtttaatttatgtggattacgacttcatctaaga 177  Q
    | ||||||||  ||||||||| ||||| |||||||    
T  3386928 aatttaatttcagtggattaccacttcttctaaga 3386894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 112 - 178
Target Start/End: Original strand, 23262606 - 23262672
Alignment:
Q  112 gttcgaacccgggacctcacagttgtgtgtgagtttaatttatgtggattacgacttcatctaagac 178  Q
    |||||||||  | |||| ||||||||||||||||||| |||  ||||||||| ||||||||||||||    
T  23262606 gttcgaacctagaaccttacagttgtgtgtgagtttattttcagtggattaccacttcatctaagac 23262672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 19181789 - 19181838
Alignment:
Q  128 tcacagttgtgtgtgagtttaatttatgtggattacgacttcatctaagac 178  Q
    |||||||||||||||||||||||||  ||||||||| ||||||| ||||||    
T  19181789 tcacagttgtgtgtgagtttaatttcagtggattac-acttcatttaagac 19181838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 178
Target Start/End: Complemental strand, 28591480 - 28591350
Alignment:
Q  48 cagtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagttt 147  Q
    |||| ||||||| ||| || |||||||||||    ||||||||||| |||||||  |||   |||||| |||| |  ||||||||||||||| |||||||    
T  28591480 cagtttagaagtcctaactaaactggcaaatactgaaattgcaaggccggacgtagtgactcgggttcaaacctgaaacctcacagttgtgtatgagttt 28591381  T
Q  148 aatttatgtggattacgacttcatctaagac 178  Q
    ||| |  |||| |||| ||||||||| ||||    
T  28591380 aatgtcagtggtttaccacttcatcttagac 28591350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 96
Target Start/End: Original strand, 4842494 - 4842530
Alignment:
Q  60 tctagctcaactggcaaatgtcaaaattgcaaggtcg 96  Q
    ||||||||||||| ||||||| |||||||||||||||    
T  4842494 tctagctcaactgacaaatgttaaaattgcaaggtcg 4842530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 175
Target Start/End: Complemental strand, 41580142 - 41580078
Alignment:
Q  111 ggttcgaacccgggacctcacagttgtgtgtgagtttaatttatgtggattacgacttcatctaa 175  Q
    |||||||| |||  |||||||||||||||||  |||||||||   |||||||| |||||||||||    
T  41580142 ggttcgaatccgaaacctcacagttgtgtgtaggtttaattttaatggattaccacttcatctaa 41580078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 85; Significance: 1e-40; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 50 - 178
Target Start/End: Complemental strand, 10639734 - 10639606
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| ||||||||||||||||||| | ||||||||||| ||||||||||||   |||||||||||||||||||||||||||||||||||||||     
T  10639734 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttat 10639635  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  ||||||||| ||||||||||||||    
T  10639634 tttcagtggattaccacttcatctaagac 10639606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 50 - 178
Target Start/End: Complemental strand, 33083682 - 33083554
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| ||||||||||||||||||| | ||||||||||| ||||||||||||   |||||||||||||||||||||||||||||||||||||||     
T  33083682 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgagtttat 33083583  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  ||||||||| ||||||||||||||    
T  33083582 tttcagtggattaccacttcatctaagac 33083554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 50 - 178
Target Start/End: Original strand, 11459715 - 11459843
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||| |||||     
T  11459715 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggtcggacgtcatgacccgggttcgaacccgggacctcacagttgtgtgtgtgtttat 11459814  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||   |||||||| ||||||||||||||    
T  11459815 tttcaatggattaccacttcatctaagac 11459843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 48 - 178
Target Start/End: Original strand, 19048752 - 19048882
Alignment:
Q  48 cagtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagttt 147  Q
    |||||||||||| ||||||||||||||||||| | |||||| |||| |||||||||||||  ||||||||||||||||||||||| ||||||||||||||    
T  19048752 cagtctagaagtcctagctcaactggcaaatgccgaaattgtaaggccggacgtcatgatccgggttcgaacccgggacctcacaattgtgtgtgagttt 19048851  T
Q  148 aatttatgtggattacgacttcatctaagac 178  Q
    | |||  |||| |||| ||||||||||||||    
T  19048852 agtttcagtggtttaccacttcatctaagac 19048882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 48 - 178
Target Start/End: Original strand, 23839857 - 23839987
Alignment:
Q  48 cagtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagttt 147  Q
    |||||||||||| ||| ||||||||||||||| ||||||||||||| |||||||  |||  |||||||||||| ||||||||||||||||||||||||||    
T  23839857 cagtctagaagtcctaactcaactggcaaatgccaaaattgcaaggccggacgttgtgacctgggttcgaacctgggacctcacagttgtgtgtgagttt 23839956  T
Q  148 aatttatgtggattacgacttcatctaagac 178  Q
    | |||  ||||||||| ||||||||||||||    
T  23839957 attttcagtggattaccacttcatctaagac 23839987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 54 - 178
Target Start/End: Complemental strand, 11816675 - 11816550
Alignment:
Q  54 agaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgag-tttaattt 152  Q
    |||||| ||||||||||||||||||| | |||||||||||||||||||| |||  ||||||||||||||| ||||||||||||| |||||| ||||||||    
T  11816675 agaagtcctagctcaactggcaaatgccgaaattgcaaggtcggacgtcgtgacctgggttcgaacccggaacctcacagttgtatgtgagttttaattt 11816576  T
Q  153 atgtggattacgacttcatctaagac 178  Q
      ||||||||| ||||||||||||||    
T  11816575 cagtggattaccacttcatctaagac 11816550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 50 - 178
Target Start/End: Original strand, 26605624 - 26605752
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| ||||||||||||||||||| | ||||||||||| |||||||  |||   |||||||||||||||||||||||||||||||||| ||||     
T  26605624 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacccgggacctcacagttgtgtgtgaatttat 26605723  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  ||||||||| ||||||||||||||    
T  26605724 tttcagtggattaccacttcatctaagac 26605752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 48 - 178
Target Start/End: Complemental strand, 39831573 - 39831444
Alignment:
Q  48 cagtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagttt 147  Q
    ||||||| |||| ||||||||||||||||||  | ||||||||||| |||||||||||||  ||||||||| ||||||||||||| ||||||||||||||    
T  39831573 cagtctataagtcctagctcaactggcaaataccgaaattgcaaggccggacgtcatgatccgggttcgaa-ccgggacctcacaattgtgtgtgagttt 39831475  T
Q  148 aatttatgtggattacgacttcatctaagac 178  Q
    |||||  |||| |||| ||||||||||||||    
T  39831474 aatttcagtggtttaccacttcatctaagac 39831444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 50 - 178
Target Start/End: Original strand, 19537307 - 19537435
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| |||| |||||||||||||| | ||||||||||| |||||||  ||||  |||||||||||||| |||||||||||||||||| |||||     
T  19537307 gtctagaagtcctagttcaactggcaaatgccgaaattgcaaggccggacgttgtgatccgggttcgaacccggaacctcacagttgtgtgtgtgtttat 19537406  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  ||||||||| ||||||||||||||    
T  19537407 tttcagtggattaccacttcatctaagac 19537435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 62 - 178
Target Start/End: Complemental strand, 37197726 - 37197610
Alignment:
Q  62 tagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaatttatgtggatt 161  Q
    |||||||||||||||||| | |||||||||||  ||||||| |||   ||||||||||||||||||||||||||||||||||||||| |||  |||||||    
T  37197726 tagctcaactggcaaatgccgaaattgcaaggctggacgtcgtgacccgggttcgaacccgggacctcacagttgtgtgtgagtttattttcagtggatt 37197627  T
Q  162 acgacttcatctaagac 178  Q
    || ||||||||||||||    
T  37197626 accacttcatctaagac 37197610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 50 - 178
Target Start/End: Complemental strand, 39535662 - 39535534
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| ||| ||||||| ||||||||| ||||||||||| |||||||| |||   |||||||||||||||||||||||||| | |||||||||||    
T  39535662 gtctagaagtcctaactcaactagcaaatgtcgaaattgcaaggccggacgtcgtgacccgggttcgaacccgggacctcacagttttatgtgagtttaa 39535563  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  | ||||||| ||||||||||||||    
T  39535562 tttgagcggattaccacttcatctaagac 39535534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 50 - 178
Target Start/End: Complemental strand, 45125293 - 45125165
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| ||||||||||||||||||| | |||||| |||| |||||||  |||  ||||||||||| ||| ||||||||||||||||||||||||     
T  45125293 gtctagaagtcctagctcaactggcaaatgccgaaattgtaaggccggacgttgtgacttgggttcgaactcggaacctcacagttgtgtgtgagtttat 45125194  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  ||||||||| ||||||||||||||    
T  45125193 tttcagtggattaccacttcatctaagac 45125165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 50 - 178
Target Start/End: Original strand, 34460369 - 34460497
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| |||||||||||| |||||| | ||||||||||| |||||||  |||   |||||||||||| | ||||||||||||||||||||||||     
T  34460369 gtctagaagtcctagctcaactgacaaatgccgaaattgcaaggccggacgttgtgacccgggttcgaacccagaacctcacagttgtgtgtgagtttat 34460468  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  ||||||||| ||||||||||||||    
T  34460469 tttcagtggattaccacttcatctaagac 34460497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 50 - 175
Target Start/End: Original strand, 11708678 - 11708803
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| ||||||||||||||||||| | |||||| |||| |||||||  |||   |||||||||||| |||||||||||||||||||| |||||     
T  11708678 gtctagaagtcctagctcaactggcaaatgccgaaattgtaaggccggacgttgtgacccgggttcgaacccaggacctcacagttgtgtgtgggtttat 11708777  T
Q  150 tttatgtggattacgacttcatctaa 175  Q
    |||  ||||||||| |||||||||||    
T  11708778 tttcagtggattaccacttcatctaa 11708803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 50 - 178
Target Start/End: Original strand, 4851320 - 4851448
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||| ||||| |||||||||||| ||| || | |||||| || | |||||||| ||||  |||||| |||||||||||||||||||||||||||||||||    
T  4851320 gtcttgaagtcctagctcaactgtcaattgccgaaattgtaaagccggacgtcgtgatccgggttcaaacccgggacctcacagttgtgtgtgagtttaa 4851419  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  ||||||||| |||||||| |||||    
T  4851420 ttttagtggattaccacttcatccaagac 4851448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 50 - 178
Target Start/End: Complemental strand, 29659346 - 29659218
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| ||||||||||||||||||| |||||||| |||| || || |  |||   ||||||||||||  |||||||||||||||||||||||||     
T  29659346 gtctagaagtcctagctcaactggcaaatgccaaaattgtaaggccgaacattgtgacccgggttcgaacccatgacctcacagttgtgtgtgagtttat 29659247  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  ||||||||| ||||||||||||||    
T  29659246 tttcagtggattaccacttcatctaagac 29659218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 50 - 178
Target Start/End: Original strand, 42578180 - 42578296
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| ||||||||||||||||||| | |||||||||||||||||||||||            |||||| ||||||||||||||||||||||||     
T  42578180 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggtcggacgtcatg------------acccggtacctcacagttgtgtgtgagtttat 42578267  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  ||||||||| ||||||||||||||    
T  42578268 tttcagtggattaccacttcatctaagac 42578296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 53 - 175
Target Start/End: Original strand, 4800879 - 4801001
Alignment:
Q  53 tagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaattt 152  Q
    |||||||||||||||||| |||||||||| |||||||||||  ||||||| |||  || |||||||||||| ||||| | ||| |||||||||||||||     
T  4800879 tagaagttctagctcaaccggcaaatgtcgaaattgcaaggctggacgtcgtgacctgagttcgaacccggaacctcgcggttatgtgtgagtttaattc 4800978  T
Q  153 atgtggattacgacttcatctaa 175  Q
      ||| ||||| |||||||||||    
T  4800979 cagtgaattaccacttcatctaa 4801001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 50 - 178
Target Start/End: Complemental strand, 7276015 - 7275886
Alignment:
Q  50 gtctagaagttctagctcaactggcaaa-tgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagttta 148  Q
    |||||||||| ||| |||||||| |||| || | |||||||||||||||| ||| ||    |||||||||||||||||||||||||||||||| | ||||    
T  7276015 gtctagaagtcctaactcaactgacaaaatgccgaaattgcaaggtcggatgtcgtggcccgggttcgaacccgggacctcacagttgtgtgtaaattta 7275916  T
Q  149 atttatgtggattacgacttcatctaagac 178  Q
    ||||   |||||||| ||||||||||||||    
T  7275915 attttaatggattaccacttcatctaagac 7275886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 50 - 178
Target Start/End: Original strand, 34234530 - 34234656
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| ||||||||||||||||||| | |||||||||||||||| ||  |||| || ||| ||||||| ||||||| |||  |||||||||||||    
T  34234530 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggtcggatgttgtgatctgagtttgaacccgagacctcatagt--tgtgtgagtttaa 34234627  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  || ||| || ||||||||||||||    
T  34234628 tttcagtagatcaccacttcatctaagac 34234656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 54 - 175
Target Start/End: Original strand, 43684073 - 43684194
Alignment:
Q  54 agaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaattta 153  Q
    |||||| ||| |||||||| |||||| | ||||||||||| |||||  ||||| |||||||||||||||||||| |||| || |||||||||||| |||     
T  43684073 agaagtcctatctcaactgacaaatgccgaaattgcaaggccggacaccatgacatgggttcgaacccgggaccccacaattatgtgtgagtttattttc 43684172  T
Q  154 tgtggattacgacttcatctaa 175  Q
      |||||||| |||||||||||    
T  43684173 actggattaccacttcatctaa 43684194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 50 - 178
Target Start/End: Original strand, 19816220 - 19816348
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| ||||||||||||||||||  | ||||||||||| |||||||  |||   ||||| |||||||| ||||| ||||||||| ||||||||     
T  19816220 gtctagaagtcctagctcaactggcaaataccgaaattgcaaggccggacgttgtgacccgggtttgaacccggaacctcgcagttgtgtatgagtttat 19816319  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  || |||||| ||||||||||||||    
T  19816320 tttcagtagattacaacttcatctaagac 19816348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 50 - 178
Target Start/End: Complemental strand, 27138045 - 27137918
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| |||||||||||| ||||||   |||||| |||| || || || |||  |||||||||||||||||||| |||||| | |||||||||||    
T  27138045 gtctagaagtcctagctcaactgacaaatgctgaaattg-aaggccgaacatcgtgacctgggttcgaacccgggaccttacagttttatgtgagtttaa 27137947  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  ||||||||| ||||||||||||||    
T  27137946 tttcagtggattaccacttcatctaagac 27137918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 56 - 178
Target Start/End: Original strand, 21312211 - 21312331
Alignment:
Q  56 aagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaatttatg 155  Q
    |||||||||||||| |||||||||||||||||| |||  |||||||  |||| |||| ||||||| ||||||||||| |  |||||||||||| |||  |    
T  21312211 aagttctagctcaattggcaaatgtcaaaattgtaagaccggacgttgtgatctgggatcgaacctgggacctcacaat--tgtgtgagtttatttttag 21312308  T
Q  156 tggattacgacttcatctaagac 178  Q
    || ||||| ||||||||||||||    
T  21312309 tgaattaccacttcatctaagac 21312331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 50 - 176
Target Start/End: Original strand, 15782590 - 15782715
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    ||||| |||| ||||||||| || |||||| | |||||| |||||||||||||||||   ||||||||||||| ||||| |||| |||||| ||||||||    
T  15782590 gtctaaaagtcctagctcaattgacaaatgccgaaattgtaaggtcggacgtcatgacccgggttcgaacccgagaccttacag-tgtgtgggagtttaa 15782688  T
Q  150 tttatgtggattacgacttcatctaag 176  Q
    |||  |||| |||| ||||||||||||    
T  15782689 tttcagtggtttaccacttcatctaag 15782715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 49 - 147
Target Start/End: Complemental strand, 45202001 - 45201903
Alignment:
Q  49 agtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagttt 147  Q
    ||||||||||| ||| ||||| ||||||||||| |||||| |||||||| |||| ||||  | |||||||| ||| |||||||||||||||||||||||    
T  45202001 agtctagaagtcctaactcaattggcaaatgtcgaaattgtaaggtcggtcgtcgtgatccgagttcgaactcggaacctcacagttgtgtgtgagttt 45201903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 178
Target Start/End: Complemental strand, 38440322 - 38440197
Alignment:
Q  53 tagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaattt 152  Q
    ||||||||| |||||||||| |||||| | ||||||||||| |||||||| |||   || | |||||| | ||||||  || | ||||||||||||||||    
T  38440322 tagaagttccagctcaactgacaaatgccgaaattgcaaggccggacgtcgtgacccggatccgaacctgagacctcctagctatgtgtgagtttaattt 38440223  T
Q  153 atgtggattacgacttcatctaagac 178  Q
      ||||||||| ||||||||||||||    
T  38440222 tagtggattaccacttcatctaagac 38440197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 54 - 178
Target Start/End: Original strand, 42025674 - 42025799
Alignment:
Q  54 agaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagt-ttaattt 152  Q
    |||||| |||||||||||| |||||||| |||||  |||| |||| ||| |||  || |||||||||| | |||||||| |||||||||||| |||||||    
T  42025674 agaagtcctagctcaactgacaaatgtcgaaattttaaggccggatgtcgtgacctgagttcgaacccagaacctcacaattgtgtgtgagtcttaattt 42025773  T
Q  153 atgtggattacgacttcatctaagac 178  Q
      ||||| ||| ||||||||||||||    
T  42025774 cagtggactaccacttcatctaagac 42025799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 49 - 152
Target Start/End: Complemental strand, 9815925 - 9815824
Alignment:
Q  49 agtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagttta 148  Q
    |||||||||||||||||||||||| ||||| ||||||||| |||||| || ||||| || | |||| ||||| || | ||||||||||  ||||||||||    
T  9815925 agtctagaagttctagctcaactgacaaatatcaaaattgtaaggtcagatgtcataatttaggtttgaacctggaatctcacagttg--tgtgagttta 9815828  T
Q  149 attt 152  Q
    ||||    
T  9815827 attt 9815824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 52 - 163
Target Start/End: Complemental strand, 6055131 - 6055020
Alignment:
Q  52 ctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaatt 151  Q
    ||||| || ||||||||| || |||||| |||||||||||||||| ||||| | ||  || ||||||| | |||||||| || |||||||||||||||||    
T  6055131 ctagatgtcctagctcaattgacaaatgccaaaattgcaaggtcgaacgtcgtaattcggattcgaactcaggacctcatagctgtgtgtgagtttaatt 6055032  T
Q  152 tatgtggattac 163  Q
    |  |||||||||    
T  6055031 ttagtggattac 6055020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 53 - 148
Target Start/End: Original strand, 16654366 - 16654461
Alignment:
Q  53 tagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagttta 148  Q
    ||||||| ||| ||||||||  ||||| | ||||||||||| |||||| | ||||  | |||||||||||| ||||||||||||||||||||||||    
T  16654366 tagaagtcctaactcaactgataaatgccgaaattgcaaggccggacgccgtgatccgagttcgaacccggaacctcacagttgtgtgtgagttta 16654461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 49 - 175
Target Start/End: Original strand, 7349097 - 7349223
Alignment:
Q  49 agtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagttta 148  Q
    ||||||||||| | | |||||||||||||||   | ||||||||| |||||||| ||||  | ||||||| ||| |||||||||  | ||||||||||||    
T  7349097 agtctagaagtccaatctcaactggcaaatgctgatattgcaaggccggacgtcgtgatccgagttcgaatccgagacctcacaactatgtgtgagttta 7349196  T
Q  149 atttatgtggattacgacttcatctaa 175  Q
    ||||  |||||| || |||||||||||    
T  7349197 attttagtggatcaccacttcatctaa 7349223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 178
Target Start/End: Original strand, 33001761 - 33001830
Alignment:
Q  109 tgggttcgaacccgggacctcacagttgtgtgtgagtttaatttatgtggattacgacttcatctaagac 178  Q
    ||||||||||| | ||||||||||||| | ||||||||||||||  ||||||||| | ||||||||||||    
T  33001761 tgggttcgaacacaggacctcacagttatatgtgagtttaatttcagtggattaccatttcatctaagac 33001830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 50 - 178
Target Start/End: Complemental strand, 44182015 - 44181887
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    ||||| ||||| ||| | ||||| ||||||   |||||| ||||||| | ||  |||| ||| |||||| |||||| ||||||||||||||||||||||     
T  44182015 gtctaaaagttttagtttaactgacaaatgctgaaattgtaaggtcgaatgttgtgatttggattcgaatccgggatctcacagttgtgtgtgagtttat 44181916  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  ||||||||  |||| |||||||||    
T  44181915 tttcagtggattatcacttaatctaagac 44181887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 176
Target Start/End: Complemental strand, 20497715 - 20497592
Alignment:
Q  53 tagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaattt 152  Q
    ||||||| ||| ||||||| | ||||||| |||||  ||||| | ||||| ||||   ||||| ||||||| |||||||| |||| ||||||||| ||||    
T  20497715 tagaagtcctaactcaactagaaaatgtcgaaattataaggttgaacgtcgtgattcaggttcaaacccggaacctcacaattgtatgtgagttttattt 20497616  T
Q  153 atgtggattacgacttcatctaag 176  Q
      |||| |||| ||||||||||||    
T  20497615 cagtggtttaccacttcatctaag 20497592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 129
Target Start/End: Complemental strand, 25501907 - 25501832
Alignment:
Q  54 agaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctc 129  Q
    |||||| |||||||||||||||||||   ||||||||||| |||||||| |||  | ||||||||||||| |||||    
T  25501907 agaagtcctagctcaactggcaaatgctgaaattgcaaggccggacgtcgtgacctaggttcgaacccggaacctc 25501832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 175
Target Start/End: Original strand, 34093240 - 34093363
Alignment:
Q  53 tagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaattt 152  Q
    |||||||| ||||||||||| ||||||||||||||  ||||||||||||  ||||   | ||| |||||| ||| |||||  | ||| ||||||||||||    
T  34093240 tagaagttatagctcaactgacaaatgtcaaaattttaaggtcggacgttgtgatccagattcaaacccgagacatcacaaatatgtatgagtttaattt 34093339  T
Q  153 atgtgga-ttacgacttcatctaa 175  Q
      ||||| |||| |||||||||||    
T  34093340 cagtggacttaccacttcatctaa 34093363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 152
Target Start/End: Complemental strand, 40786338 - 40786235
Alignment:
Q  49 agtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagttta 148  Q
    |||||||||||  || |||||||| |||||| | ||||||||||| |||||||| |||    ||||||||||   |||||| |||||| |||||||||||    
T  40786338 agtctagaagtcataactcaactgacaaatgccgaaattgcaaggccggacgtcgtgaccctggttcgaacctaagacctcgcagttgagtgtgagttta 40786239  T
Q  149 attt 152  Q
    ||||    
T  40786238 attt 40786235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 56 - 106
Target Start/End: Original strand, 8311335 - 8311385
Alignment:
Q  56 aagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatga 106  Q
    |||||||| |||||||| ||||||||||||||||||| |||||| ||||||    
T  8311335 aagttctaactcaactgacaaatgtcaaaattgcaagatcggacatcatga 8311385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 107
Target Start/End: Complemental strand, 32844702 - 32844648
Alignment:
Q  53 tagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgat 107  Q
    |||||||| ||| |||||||||||||| | ||||||||||| |||||||||||||    
T  32844702 tagaagttttagttcaactggcaaatgccgaaattgcaaggccggacgtcatgat 32844648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 62 - 175
Target Start/End: Complemental strand, 40825274 - 40825161
Alignment:
Q  62 tagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaatttatgtggatt 161  Q
    ||||||||||| |||||| |||||||  ||||| |||||||||||   ||||||||| ||| || ||  ||| |||||||||||||| |||   ||||||    
T  40825274 tagctcaactgtcaaatgccaaaattataaggttggacgtcatgacccgggttcgaatccgagatcttccaggtgtgtgtgagtttattttcaatggatt 40825175  T
Q  162 acgacttcatctaa 175  Q
    |  |||||||||||    
T  40825174 atcacttcatctaa 40825161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 178
Target Start/End: Complemental strand, 43778537 - 43778468
Alignment:
Q  109 tgggttcgaacccgggacctcacagttgtgtgtgagtttaatttatgtggattacgacttcatctaagac 178  Q
    ||||||||||||   ||| ||||||||||||||||||||| |||   |||||||| ||||||||||||||    
T  43778537 tgggttcgaacctaagacttcacagttgtgtgtgagtttattttcattggattaccacttcatctaagac 43778468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 121
Target Start/End: Original strand, 23957055 - 23957123
Alignment:
Q  54 agaagttctagctcaactggc-aaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaaccc 121  Q
    ||||||||||||||||||||| ||||||| ||||||  ||| |||| ||||||||  ||||||||||||    
T  23957055 agaagttctagctcaactggcaaaatgtcgaaattgttaggccggatgtcatgatcggggttcgaaccc 23957123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 50 - 89
Target Start/End: Original strand, 13106356 - 13106395
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgc 89  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  13106356 gtctagaagtcctagctcaactggtaaatgtcaaaattgc 13106395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 117 - 150
Target Start/End: Original strand, 12366795 - 12366828
Alignment:
Q  117 aacccgggacctcacagttgtgtgtgagtttaat 150  Q
    ||||||| ||||||||||||||||||||||||||    
T  12366795 aacccggaacctcacagttgtgtgtgagtttaat 12366828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 110 - 147
Target Start/End: Original strand, 29726075 - 29726112
Alignment:
Q  110 gggttcgaacccgggacctcacagttgtgtgtgagttt 147  Q
    |||||||||||||||||||| ||||||||| |||||||    
T  29726075 gggttcgaacccgggacctcgcagttgtgtctgagttt 29726112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 152
Target Start/End: Complemental strand, 34239947 - 34239846
Alignment:
Q  51 tctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaat 150  Q
    ||||||||| ||| ||| ||| ||||||| | |||||| |||||| |||||| |||   | |||||||| | | |||| |||||||||| ||||||||||    
T  34239947 tctagaagtcctaactctactagcaaatgccgaaattgtaaggtcagacgtcgtgactcgagttcgaactcagaaccttacagttgtgtatgagtttaat 34239848  T
Q  151 tt 152  Q
    ||    
T  34239847 tt 34239846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 49 - 178
Target Start/End: Original strand, 56480 - 56609
Alignment:
Q  49 agtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagttta 148  Q
    ||||||||||| ||||||||||||||||||| | |||||||||||||||||||  |||   |||||||||||||||||||||||||||||||||||||||    
T  56480 agtctagaagtcctagctcaactggcaaatgccgaaattgcaaggtcggacgttgtgacccgggttcgaacccgggacctcacagttgtgtgtgagttta 56579  T
Q  149 atttatgtggattacgacttcatctaagac 178  Q
     |||  ||||||||| ||||||||||||||    
T  56580 ttttcagtggattaccacttcatctaagac 56609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 48 - 178
Target Start/End: Original strand, 114250 - 114380
Alignment:
Q  48 cagtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagttt 147  Q
    |||||||||||| ||||||||||||||||||| | |||||| |||| |||||||||||||  ||||||||||||||||||||||| ||||||||||||||    
T  114250 cagtctagaagtcctagctcaactggcaaatgccgaaattgtaaggccggacgtcatgatccgggttcgaacccgggacctcacaattgtgtgtgagttt 114349  T
Q  148 aatttatgtggattacgacttcatctaagac 178  Q
    | |||  |||| |||| ||||||||||||||    
T  114350 agtttcagtggtttaccacttcatctaagac 114380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 77; Significance: 8e-36; HSPs: 2)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 50 - 178
Target Start/End: Complemental strand, 14079 - 13951
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| ||||||||||||||||||  | ||||||||||| |||||||  ||||  |||||||||||||||||||||||||||||||||||||||     
T  14079 gtctagaagtcctagctcaactggcaaataccgaaattgcaaggccggacgttgtgatccgggttcgaacccgggacctcacagttgtgtgtgagtttat 13980  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  ||||||||| ||||||||||||||    
T  13979 tttcagtggattaccacttcatctaagac 13951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 50 - 178
Target Start/End: Complemental strand, 19759 - 19631
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| ||||||||||||||||||  | ||||||||||| |||||||  ||||  |||||||||||||||||||||||||||||||||||||||     
T  19759 gtctagaagtcctagctcaactggcaaataccgaaattgcaaggccggacgttgtgatccgggttcgaacccgggacctcacagttgtgtgtgagtttat 19660  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  ||||||||| ||||||||||||||    
T  19659 tttcagtggattaccacttcatctaagac 19631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 50 - 178
Target Start/End: Complemental strand, 10101 - 9973
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaa 149  Q
    |||||||||| ||||||||||||||||||| | ||||||||||| |||||||| | |   ||||||||||||||||||||| |||||||||||||||||     
T  10101 gtctagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcgtaacccgggttcgaacccgggacctcatagttgtgtgtgagtttat 10002  T
Q  150 tttatgtggattacgacttcatctaagac 178  Q
    |||  ||||||||| ||||||||||||||    
T  10001 tttcagtggattaccacttcatctaagac 9973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 49 - 178
Target Start/End: Original strand, 34817 - 34947
Alignment:
Q  49 agtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgag-ttt 147  Q
    |||| |||||| ||||||||||||||||||| | ||||||||||| |||||||| ||| ||||||||||| || ||||||| ||||||| |||||| |||    
T  34817 agtccagaagtcctagctcaactggcaaatgccgaaattgcaaggccggacgtcgtgacatgggttcgaatccaggacctcgcagttgtatgtgagtttt 34916  T
Q  148 aatttatgtggattacgacttcatctaagac 178  Q
    |||||  ||||||||| ||||||||||||||    
T  34917 aatttcagtggattaccacttcatctaagac 34947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 49 - 178
Target Start/End: Complemental strand, 9072 - 8943
Alignment:
Q  49 agtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagttta 148  Q
    ||||||||||||||||||||||||| ||||| | |||||| ||||  |||||| |||||  |||||||||||  ||||||||||||||||||||||||||    
T  9072 agtctagaagttctagctcaactggtaaatgccgaaattgtaaggcgggacgttatgattcgggttcgaacctaggacctcacagttgtgtgtgagttta 8973  T
Q  149 atttatgtggattacgacttcatctaagac 178  Q
    ||||  |||  |||| ||||||||||||||    
T  8972 atttcagtgatttaccacttcatctaagac 8943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 61 - 178
Target Start/End: Original strand, 22174 - 22291
Alignment:
Q  61 ctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacagttgtgtgtgagtttaatttatgtggat 160  Q
    |||||||||||| |||||| | |||||| |||| |||||||| |||   |||||||| |||||||||||||||||| |||||||||||||||  ||||||    
T  22174 ctagctcaactgacaaatgccgaaattgtaaggccggacgtcgtgacccgggttcgagcccgggacctcacagttgcgtgtgagtttaatttcagtggat 22273  T
Q  161 tacgacttcatctaagac 178  Q
    ||| ||||||||||||||    
T  22274 taccacttcatctaagac 22291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 49 - 133
Target Start/End: Original strand, 14494 - 14578
Alignment:
Q  49 agtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctcacag 133  Q
    |||||| |||| ||||| || ||| |||||||| ||||||||||| |||||||| ||||  ||||||||||||||||||||||||    
T  14494 agtctataagtcctagcacagctgacaaatgtcgaaattgcaaggccggacgtcgtgatccgggttcgaacccgggacctcacag 14578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 130
Target Start/End: Complemental strand, 3339 - 3259
Alignment:
Q  50 gtctagaagttctagctcaactggcaaatgtcaaaattgcaaggtcggacgtcatgatatgggttcgaacccgggacctca 130  Q
    |||||||||| ||||||||||||||||||  | ||||| ||| |  |||| || ||| | |||||||||||||||||||||    
T  3339 gtctagaagtcctagctcaactggcaaattccgaaattacaaagctggacttcgtgacacgggttcgaacccgggacctca 3259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 55 - 121
Target Start/End: Original strand, 411652 - 411719
Alignment:
Q  55 gaagttctagctcaactggcaaa-tgtcaaaattgcaaggtcggacgtcatgatatgggttcgaaccc 121  Q
    ||||||||| ||||||||||||| |||||||||||  |||||||| |||||||   ||||||||||||    
T  411652 gaagttctaactcaactggcaaaatgtcaaaattgttaggtcggatgtcatgaccggggttcgaaccc 411719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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