View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF15454_low_28 (Length: 301)
Name: NF15454_low_28
Description: NF15454
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15454_low_28 |
 | |
|
Alignment Details
Target: chr3 (Bit Score: 274; Significance: 1e-153; HSPs: 22)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 1 - 286
Target Start/End: Original strand, 19951395 - 19951680
Alignment:
| Q |
1 |
aatcacccttttacttggttcaaatttggatgtgggagaggtttaaaaatttacaaccacaacccatgccgataaaccatggagacccttttttgtttag |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19951395 |
aatcacccttttacttggttcaaatttggatttgggagaggtttaaaaatttacaaccacaacccatgccgataaaccatggagacccttttttgtttag |
19951494 |
T |
|
| Q |
101 |
gtggcataaggttaagcccttgagaatccacgatgttaggttagcattagacgcagctatggatgattttatttggcgtccatatgttagatatgctgat |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19951495 |
gtggcataaggttaagcccttgagaatccacgatgttaggttagcattagacgcagctatgggtgattttatttggcgtccatatgttagatatgctgat |
19951594 |
T |
|
| Q |
201 |
aagtgtggaatgttttatccgaatgaagaaattttggtgccatttaagaaagatttggtggatcaacaaatgttggcatttgttat |
286 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
19951595 |
aagtgtggaatgttttatccgaatgaagaaattttggtgccatttaagaaagatttggtggatcaacaaatgttgtcatttgttat |
19951680 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 6 - 286
Target Start/End: Original strand, 17114992 - 17115269
Alignment:
| Q |
6 |
cccttttacttggttcaaatttggatgtgggagaggtttaaaaatttacaaccacaacccatgccgataaaccatggagacccttttttgtttaggtggc |
105 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
17114992 |
cccttttacttggttcaaatttggatgtgggagaggttcaaaaatttacaaccacaatccatgttgatcaaccatggagaccctttattgtttaggtggc |
17115091 |
T |
|
| Q |
106 |
ataaggttaagcccttgagaatccacgatgttaggttagcattagacgcagctatggatgattttatttggcgtccatatgttagatatgctgataagtg |
205 |
Q |
| |
|
||| |||| || || ||| ||| || |||||| | ||||||||||| |||| | ||||||||| ||||||||||||| ||||||||||||||||||| |
|
|
| T |
17115092 |
atagggttcaggccgtgaaaattgacaatgttaagctagcattagacttagctgtcgatgattttctttggcgtccatacattagatatgctgataagtg |
17115191 |
T |
|
| Q |
206 |
tggaatgttttatccgaatgaagaaattttggtgccatttaagaaagatttggtggatcaacaaatgttggcatttgttat |
286 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||| ||||| || ||||||| ||||| || |||||||| |||||||||| |
|
|
| T |
17115192 |
tggaatgttttatccaaatgatgaaattttggtaccattcaaaaaagatt---tggataaaaaaatgttgtcatttgttat |
17115269 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 20036447 - 20036202
Alignment:
| Q |
1 |
aatcacccttttacttggttcaaatttggatgtgggagaggtttaaaaatttacaaccacaacccatgccgataaaccatggagacccttttttgtttag |
100 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| | | |||||||| ||||||||||||||||| |
|
|
| T |
20036447 |
aatcacccttttacttggttcaaatttgggtgtgggagaggttcaaaaatttacaaccacaacccatgttgttgaaccatggggacccttttttgtttag |
20036348 |
T |
|
| Q |
101 |
gtggcataaggttaagcccttgagaatccacgatgttaggttagcattagacgcagctatggatgattttatttggcgtccatatgttagatatgctgat |
200 |
Q |
| |
|
||||||||||||||||||||||| || || |||||||| | ||||||||| | ||||||||||| ||| ||||||||||||||||| ||||| ||||| |
|
|
| T |
20036347 |
gtggcataaggttaagcccttgatgattgacaatgttaggatggcattagactcggctatggatgactttctttggcgtccatatgttcgatattctgat |
20036248 |
T |
|
| Q |
201 |
aagtgtggaatgttttatccgaatgaagaaattttggtgccattta |
246 |
Q |
| |
|
|||| || | || ||||||| ||||| |||| |||||| ||||||| |
|
|
| T |
20036247 |
aagtttgaactgctttatccaaatgatgaaactttggtaccattta |
20036202 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 286
Target Start/End: Original strand, 26647275 - 26647560
Alignment:
| Q |
1 |
aatcacccttttacttggttcaaatttggatgtgggagaggtttaaaaatttacaaccacaacccatgccgataaaccatggagacccttttttgtttag |
100 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||| ||| ||||| ||||||||||| |||||||| |
|
|
| T |
26647275 |
aatcacccttttacttggttcaaatttgggtgtgggaaaggttcaaaaatttacaaccacaacccaatttgatcaaccaaggagaccctttgttgtttag |
26647374 |
T |
|
| Q |
101 |
gtggcataaggttaagcccttgagaatccacgatgttaggttagcattagacgcagctatggatgattttatttggcgtccatatgttagatatgctgat |
200 |
Q |
| |
|
|||||||||||||||| ||||| ||| || ||||| || ||| |||| | ||| | ||||||||| |||||||||| |||||||||||||||||| |
|
|
| T |
26647375 |
gtggcataaggttaagatcttgaaaattgacagtgttaagtgggcactagattcggctgttgatgattttctttggcgtccttatgttagatatgctgat |
26647474 |
T |
|
| Q |
201 |
aagtgtggaatgttttatccgaatgaagaaattttggtgccatttaagaaagatttggtggatcaacaaatgttggcatttgttat |
286 |
Q |
| |
|
||||||| | |||||||||| ||||| ||||||| ||| |||||||||||||||||||| ||| |||||||| | |||||||||| |
|
|
| T |
26647475 |
aagtgtgaattgttttatccaaatgatgaaatttcggtaccatttaagaaagatttggttgatgaacaaatgctctcatttgttat |
26647560 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 19838667 - 19838915
Alignment:
| Q |
1 |
aatcacccttttacttggttcaaatttggatgtgggagaggtttaaaaatttacaaccacaacccatgccgataaaccatggagacccttttttgtttag |
100 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||| | | ||||| || ||||||||||||||||| |
|
|
| T |
19838667 |
aatcacccttttacttggttcaaatttgggtgtgggagaggttcaaaaatttacaaccacaaccaatgttgttgaaccagggggacccttttttgtttag |
19838766 |
T |
|
| Q |
101 |
gtggcataaggttaagcccttgagaatccacgatgttaggttagcattagacgcagctatggatgattttatttggcgtccatatgttagatatgctgat |
200 |
Q |
| |
|
||||||||| |||||| |||||| ||| || || ||||| | || |||||| | ||||||||||| ||| ||||||||||||||||| ||||| ||||| |
|
|
| T |
19838767 |
gtggcataaagttaaggccttgataattgacaatattaggatggctttagactcggctatggatgactttctttggcgtccatatgttcgatattctgat |
19838866 |
T |
|
| Q |
201 |
aagtgtggaatgttttatccgaatgaagaaattttggtgccatttaaga |
249 |
Q |
| |
|
||||||| | |||||||||| ||||| ||||||||||| |||||||||| |
|
|
| T |
19838867 |
aagtgtgaactgttttatccaaatgatgaaattttggtaccatttaaga |
19838915 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 1 - 258
Target Start/End: Original strand, 19956358 - 19956615
Alignment:
| Q |
1 |
aatcacccttttacttggttcaaatttggatgtgggagaggtttaaaaatttacaaccacaacccatgccgataaaccatggagacccttttttgtttag |
100 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||| |||||||||||| | | |||||| | |||||||||||||||| |
|
|
| T |
19956358 |
aatcacccttttacttggttcaaatttgggtgtgggaaaggttcaaaaatttacagccacaacccatgttgttgaaccataggaacccttttttgtttag |
19956457 |
T |
|
| Q |
101 |
gtggcataaggttaagcccttgagaatccacgatgttaggttagcattagacgcagctatggatgattttatttggcgtccatatgttagatatgctgat |
200 |
Q |
| |
|
||||||||||||||||||||||| | | || |||||||| | ||||||||| | ||||||||||| ||| ||||||||||||||||| ||||| || || |
|
|
| T |
19956458 |
gtggcataaggttaagcccttgatagttgacaatgttaggatggcattagactcggctatggatgactttctttggcgtccatatgttcgatattctcat |
19956557 |
T |
|
| Q |
201 |
aagtgtggaatgttttatccgaatgaagaaattttggtgccatttaagaaagatttgg |
258 |
Q |
| |
|
|| ||||| | |||||||| ||||| ||||||||||| ||||||||||| ||||||| |
|
|
| T |
19956558 |
aaatgtgggctattttatccaaatgatgaaattttggtaccatttaagaaggatttgg |
19956615 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 272
Target Start/End: Original strand, 19858343 - 19858614
Alignment:
| Q |
1 |
aatcacccttttacttggttcaaatttggatgtgggagaggtttaaaaatttacaaccacaacccatgccgataaaccatggagacccttttttgtttag |
100 |
Q |
| |
|
||||||||||||||||| ||||| ||||| | ||||| ||||| ||||||||| | |||||||||||| ||| || |||||||| ||||| |||||||| |
|
|
| T |
19858343 |
aatcacccttttacttgcttcaagtttgggtttgggaaaggttcaaaaatttagagccacaacccatgttgatcaagcatggagaacctttattgtttag |
19858442 |
T |
|
| Q |
101 |
gtggcataaggttaagcccttgagaatccacgatgttaggttagcattagacgcagctatggatgattttatttggcgtccatatgttagatatgctgat |
200 |
Q |
| |
|
|||||||||||||||| |||||| | | || |||||| ||| ||||||||| | ||||| |||||||||||||||||||| || ||||||||||| ||| |
|
|
| T |
19858443 |
gtggcataaggttaaggccttgaaagttgacaatgttaagttggcattagactcggctattgatgattttatttggcgtccttacgttagatatgcagat |
19858542 |
T |
|
| Q |
201 |
aagtgtggaatgttttatccgaatgaagaaattttggtgccatttaagaaagatttggtggatcaacaaatg |
272 |
Q |
| |
|
||||||||| |||||||||| ||||| ||||||| ||| ||| | ||||||||||||| ||| |||||||| |
|
|
| T |
19858543 |
aagtgtggactgttttatccaaatgacgaaatttgggtatcatattagaaagatttggtcgataaacaaatg |
19858614 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 258
Target Start/End: Complemental strand, 20016045 - 20015788
Alignment:
| Q |
1 |
aatcacccttttacttggttcaaatttggatgtgggagaggtttaaaaatttacaaccacaacccatgccgataaaccatggagacccttttttgtttag |
100 |
Q |
| |
|
|||||||| |||| ||||||||||||||| ||||||||||||| |||| ||||||||||||||||||| ||| || |||| ||||||||| |||||||| |
|
|
| T |
20016045 |
aatcacccatttatttggttcaaatttgggtgtgggagaggttcaaaattttacaaccacaacccatgttgatcaatcatgaagaccctttattgtttag |
20015946 |
T |
|
| Q |
101 |
gtggcataaggttaagcccttgagaatccacgatgttaggttagcattagacgcagctatggatgattttatttggcgtccatatgttagatatgctgat |
200 |
Q |
| |
|
||||||||||||| || | |||| ||| || |||||| | | ||||||||| ||||||| ||||||||| |||||||||||||| | |||||||||||| |
|
|
| T |
20015945 |
gtggcataaggttcaggctttgaaaattgacaatgttatggtggcattagactcagctattgatgattttctttggcgtccatatttcagatatgctgat |
20015846 |
T |
|
| Q |
201 |
aagtgtggaatgttttatccgaatgaagaaattttggtgccatttaagaaagatttgg |
258 |
Q |
| |
|
||||||| |||||||||| ||||| | | |||| || ||||||||||||||||||| |
|
|
| T |
20015845 |
aagtgtgatttgttttatccaaatgatgcattttttgtaccatttaagaaagatttgg |
20015788 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 1 - 258
Target Start/End: Original strand, 19832143 - 19832400
Alignment:
| Q |
1 |
aatcacccttttacttggttcaaatttggatgtgggagaggtttaaaaatttacaaccacaacccatgccgataaaccatggagacccttttttgtttag |
100 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||| | | ||| | || || || ||||||||||| |
|
|
| T |
19832143 |
aatcacccttttacttggttcaaatttgggtgtgggagaggttcaaaaatttacatccacaacccatgttgttgaacaaaggggaaccatttttgtttag |
19832242 |
T |
|
| Q |
101 |
gtggcataaggttaagcccttgagaatccacgatgttaggttagcattagacgcagctatggatgattttatttggcgtccatatgttagatatgctgat |
200 |
Q |
| |
|
|||||||||||||||| ||||| ||| || |||||||| | ||||||||| |||| |||||| ||| ||||||||||||||||| ||||| ||||| |
|
|
| T |
19832243 |
gtggcataaggttaaggccttggtaattgacaatgttaggatggcattagacttggctaaggatgactttctttggcgtccatatgttcgatattctgat |
19832342 |
T |
|
| Q |
201 |
aagtgtggaatgttttatccgaatgaagaaattttggtgccatttaagaaagatttgg |
258 |
Q |
| |
|
||||||| |||||||||||||||| | ||||||||| |||||||||| ||||||| |
|
|
| T |
19832343 |
aagtgtgagctgttttatccgaatgatggaattttggtaccatttaagatggatttgg |
19832400 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 19812551 - 19812800
Alignment:
| Q |
1 |
aatcacccttttacttggttcaaatttggatgtgggagaggtttaaaaatttacaaccacaac------ccatgccgataaaccatggagaccctttttt |
94 |
Q |
| |
|
||||||||||||||||||||||||||||| | ||||||||||| |||||||| |||||||||| | ||| ||| |||||||| ||||||||||| |
|
|
| T |
19812551 |
aatcacccttttacttggttcaaatttgggtttgggagaggttcaaaaatttgcaaccacaacaacaaactatgttgatcaaccatggcgaccctttttt |
19812650 |
T |
|
| Q |
95 |
gtttaggtggcataaggttaagcccttgagaatccacgatgttaggttagcattagacgcagctatggatgattttatttggcgtccatatgttagatat |
194 |
Q |
| |
|
|||||||||||||||||||| | ||| ||| || ||||||||||||| |||||| | ||| ||||||||||| ||||||||||||||||||||||| |
|
|
| T |
19812651 |
gtttaggtggcataaggttacggacttatcaattgacaatgttaggttagcgttagactcggctgtggatgattttctttggcgtccatatgttagatat |
19812750 |
T |
|
| Q |
195 |
gctgataagtgtggaatgttttatccgaatgaagaaattttggtgccatt |
244 |
Q |
| |
|
|| |||||||||| | |||||||||| ||||| ||||||| ||| ||||| |
|
|
| T |
19812751 |
gccgataagtgtgcattgttttatccaaatgatgaaatttcggtaccatt |
19812800 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 2 - 258
Target Start/End: Original strand, 26653424 - 26653679
Alignment:
| Q |
2 |
atcacccttttacttggttcaaatttggatgtgggagaggtttaaaaatttacaaccacaacccatgccgataaaccatggagacccttttttgtttagg |
101 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||| | |||||| ||||||||||||| | ||| || || ||||| || ||||| ||| |
|
|
| T |
26653424 |
atcacccttttacttggttcaaatttgggtgtgggagaggttcacaaatttgcaaccacaacccaagttgatcaatagtgaagaccattcattgttgagg |
26653523 |
T |
|
| Q |
102 |
tggcataaggttaagcccttgagaatccacgatgttaggttagcattagacgcagctatggatgattttatttggcgtccatatgttagatatgctgata |
201 |
Q |
| |
|
||||||||||||| |||||| | ||| || |||| ||||| ||||||||| |||| || ||||||||| ||||||||||||||||||||||| || | | |
|
|
| T |
26653524 |
tggcataaggttatgccctt-ataatttacaatgtgaggttggcattagactcagcaattgatgattttctttggcgtccatatgttagatatcctaaca |
26653622 |
T |
|
| Q |
202 |
agtgtggaatgttttatccgaatgaagaaattttggtgccatttaagaaagatttgg |
258 |
Q |
| |
|
||||||||||||||||||| ||| | ||||||| ||| ||||||||||| ||||||| |
|
|
| T |
26653623 |
agtgtggaatgttttatccaaataatgaaatttgggtaccatttaagaaggatttgg |
26653679 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 258
Target Start/End: Original strand, 19818828 - 19819091
Alignment:
| Q |
1 |
aatcacccttttacttggttcaaatttggatgtgggagaggtttaaaaatttacaaccac------aacccatgccgataaaccatggagaccctttttt |
94 |
Q |
| |
|
||||||||||||| ||||||||||| ||| ||||||||||||| |||||| | ||||||| || ||||| |||||||||||||||||||||||| |
|
|
| T |
19818828 |
aatcacccttttatttggttcaaatatgggtgtgggagaggttcaaaaatatgcaaccactgccacaaaccatgttgataaaccatggagaccctttttt |
19818927 |
T |
|
| Q |
95 |
gtttaggtggcataaggttaagcccttgagaatccacgatgttaggttagcattagacgcagctatggatgattttatttggcgtccatatgttagatat |
194 |
Q |
| |
|
||||||||||||| | ||| || ||||| ||| || |||||||| | ||||||||| | |||| |||||| ||| ||||||||||||||||| ||||| |
|
|
| T |
19818928 |
gtttaggtggcatgatgttcaggccttggaaattgacaatgttaggatggcattagactcggctaaggatgactttctttggcgtccatatgttcgatat |
19819027 |
T |
|
| Q |
195 |
gctgataagtgtggaatgttttatccgaatgaagaaattttggtgccatttaagaaagatttgg |
258 |
Q |
| |
|
|||||||||||| |||||||||||||||| | ||||||||| |||||||||| ||||||| |
|
|
| T |
19819028 |
tctgataagtgtgagctgttttatccgaatgatggaattttggtaccatttaagatggatttgg |
19819091 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 19849264 - 19849508
Alignment:
| Q |
1 |
aatcacccttttacttggttcaaatttggatgtgggagaggtttaaaaatttacaaccacaacc------catgccgataaaccatggagaccctttttt |
94 |
Q |
| |
|
||||||||||||| ||||||||||||||| ||||||||||||| |||||||| |||||||| || |||| || |||||||| || ||||| || |
|
|
| T |
19849264 |
aatcacccttttatttggttcaaatttgggtgtgggagaggttcaaaaatttgcaaccacagccacaaaccatgttgaccaaccatggggatcctttatt |
19849363 |
T |
|
| Q |
95 |
gtttaggtggcataaggttaagcccttgagaatccacgatgttaggttagcattagacgcagctatggatgattttatttggcgtccatatgttagatat |
194 |
Q |
| |
|
|||||| |||||||||||| || |||||| ||| || |||||||||| ||||||||| | ||||||||||||||| ||||||||||||||| ||||||| |
|
|
| T |
19849364 |
gtttagatggcataaggttcaggccttgaaaattgacaatgttaggttggcattagactcggctatggatgattttctttggcgtccatatgctagatat |
19849463 |
T |
|
| Q |
195 |
gctgataagtgtggaatgttttatccgaatgaagaaattttggtg |
239 |
Q |
| |
|
||| |||| | ||||||||||||||| ||||| | ||||| |||| |
|
|
| T |
19849464 |
gctcataattatggaatgttttatccaaatgatggaatttgggtg |
19849508 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 272
Target Start/End: Original strand, 19853765 - 19854042
Alignment:
| Q |
1 |
aatcacccttttacttggttcaaatttggatgtgggagaggtttaaaaatttacaaccacaacccatgccgataaaccatggagacccttttttgtttag |
100 |
Q |
| |
|
||||||||||||||||||| ||| |||| |||||||||| || | |||||| || |||||||| | | ||| ||| ||||||||| | | ||||| || |
|
|
| T |
19853765 |
aatcacccttttacttggtacaagcttgggtgtgggagagattcataaatttgcagccacaaccgaagttgatcaacaatggagaccatgtattgttgag |
19853864 |
T |
|
| Q |
101 |
gtggcataaggttaa---gcccttgagaatccacgatgttaggttagcattagacgcagcta---tggatgattttatttggcgtccatatgttagatat |
194 |
Q |
| |
|
||||||||||||| | |||||||| ||| || |||| ||||| |||||||| || | | |||||||||||||||||||||| |||||||| ||| |
|
|
| T |
19853865 |
gtggcataaggttgaagcgcccttgaaaattaaccatgtgaggttggcattagattcatcaacaatggatgattttatttggcgtccttatgttagctat |
19853964 |
T |
|
| Q |
195 |
gctgataagtgtggaatgttttatccgaatgaagaaattttggtgccatttaagaaagatttggtggatcaacaaatg |
272 |
Q |
| |
|
||| ||||||||||||||||||| |||||||| |||||| ||| ||||||||||| |||||||||||| |||||||| |
|
|
| T |
19853965 |
gctcataagtgtggaatgttttacccgaatgatgaaattcgggtaccatttaagaacgatttggtggataaacaaatg |
19854042 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 2 - 258
Target Start/End: Original strand, 20046395 - 20046651
Alignment:
| Q |
2 |
atcacccttttacttggttcaaatttggatgtgggagaggtttaaaaatttacaaccacaacccatgccgataaaccatggagacccttttttgtttagg |
101 |
Q |
| |
|
|||||||||||| ||||||||| ||||| ||||||||||||| ||| |||| ||||||||||||| ||| || | | |||||||| ||||||||| |
|
|
| T |
20046395 |
atcacccttttatttggttcaagtttgggtgtgggagaggttcgcaaaattaccaccacaacccatgttgatcaatcccagcgaccctttattgtttagg |
20046494 |
T |
|
| Q |
102 |
tggcataaggttaagcccttgagaatccacgatgttaggttagcattagacgcagctatggatgattttatttggcgtccatatgttagatatgctgata |
201 |
Q |
| |
|
|||||||||||| | | |||| ||| | |||||| ||| ||||||||| || || | ||||||||| ||||||||||||||||||||||| |||| | |
|
|
| T |
20046495 |
tggcataaggttcacgcattgaaaattgataatgttaagttggcattagactcaactgtcgatgattttctttggcgtccatatgttagatatcctgaca |
20046594 |
T |
|
| Q |
202 |
agtgtggaatgttttatccgaatgaagaaattttggtgccatttaagaaagatttgg |
258 |
Q |
| |
|
|||||||||| |||||||| ||| | ||||||| ||| ||||||||||| ||||||| |
|
|
| T |
20046595 |
agtgtggaattttttatccaaataacgaaatttgggtaccatttaagaaggatttgg |
20046651 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 259
Target Start/End: Complemental strand, 24839821 - 24839563
Alignment:
| Q |
1 |
aatcacccttttacttggttcaaatttggatgtgggagaggtttaaaaatttacaaccacaacccatgccgataaaccatggagacccttttttgtttag |
100 |
Q |
| |
|
|||||||||||||| |||||||| ||||| | ||||| ||||| |||||||| || |||||||||| | | || || |||||| | | ||||| || |
|
|
| T |
24839821 |
aatcacccttttacctggttcaagtttgggtttgggaaaggttcaaaaatttgcagccacaacccaagttgggcaataatcgagaccatgtattgttgag |
24839722 |
T |
|
| Q |
101 |
gtggcataaggttaagcccttgagaatccacgatgttaggttagcattagacgcagctatggatgattttatttggcgtccatatgttagatatgctgat |
200 |
Q |
| |
|
||||||||| |||||| |||||| ||| || |||| ||||| ||||||||| ||| || |||||||||||||||||||| |||||| ||||| |||| |
|
|
| T |
24839721 |
gtggcataatgttaaggccttgaaaattgacaatgtgaggttggcattagactcagtcatcgatgattttatttggcgtccttatgttcaatatgttgat |
24839622 |
T |
|
| Q |
201 |
aagtgtggaatgttttatccgaatgaagaaattttggtgccatttaagaaagatttggt |
259 |
Q |
| |
|
||||||||| |||||||||| || || |||| |||||| |||||||||||||||||||| |
|
|
| T |
24839621 |
aagtgtggagtgttttatccaaaggatgaaactttggtaccatttaagaaagatttggt |
24839563 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 19943988 - 19944246
Alignment:
| Q |
1 |
aatcacccttttacttggttcaaatttggatgtgggagaggtttaaaaatttacaaccacaacccatgccgataaaccatggagacccttttttgtttag |
100 |
Q |
| |
|
|||||||||||||| |||||||| ||||| | ||||| ||||| |||||||| || |||||||| | | ||| || ||||||||| | | ||||| || |
|
|
| T |
19943988 |
aatcacccttttacctggttcaagtttgggtttgggaaaggttcaaaaatttgcagccacaaccaaagttgatcaataatggagaccatgtattgttgag |
19944087 |
T |
|
| Q |
101 |
gtggcataaggttaagcccttgagaatccacgatgttaggttagcattagacgcagctatggatgattttatttggcgtccatatgttagatatgctgat |
200 |
Q |
| |
|
||||||||| |||||| |||||| ||| || |||| |||| |||||||| ||||||| ||||||||||||| ||||| |||||| |||||||||| |
|
|
| T |
19944088 |
gtggcataatgttaaggccttgaaaattgacaatgtggggttggcattagattcagctatcaatgattttatttgccgtccttatgttcaatatgctgat |
19944187 |
T |
|
| Q |
201 |
aagtgtggaatgttttatccgaatgaagaaattttggtgccatttaagaaagatttggt |
259 |
Q |
| |
|
||||||||| | | |||||| ||||| |||| |||||| |||||||| ||||||||||| |
|
|
| T |
19944188 |
aagtgtggagtatattatccaaatgatgaaactttggtaccatttaaaaaagatttggt |
19944246 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 19989796 - 19989904
Alignment:
| Q |
1 |
aatcacccttttacttggttcaaatttggatgtgggagaggtttaaaaatttacaaccacaacccatgccgataaaccatggagacccttttttgtttag |
100 |
Q |
| |
|
||||||||||||||||||||||| ||||| | ||||||||||| ||||||||||||||||||||||||| ||| ||| ||| |||||||||||||||||| |
|
|
| T |
19989796 |
aatcacccttttacttggttcaagtttgggtttgggagaggttcaaaaatttacaaccacaacccatgctgatcaactatgaagacccttttttgtttag |
19989895 |
T |
|
| Q |
101 |
gtggcataa |
109 |
Q |
| |
|
||||||||| |
|
|
| T |
19989896 |
gtggcataa |
19989904 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 183 - 286
Target Start/End: Complemental strand, 20033999 - 20033896
Alignment:
| Q |
183 |
tatgttagatatgctgataagtgtggaatgttttatccgaatgaagaaattttggtgccatttaagaaagatttggtggatcaacaaatgttggcatttg |
282 |
Q |
| |
|
|||||||||||||||||||||||| || |||||||||||||||| ||||||| || ||||||||||| ||||||||||||||||||||| || |||||| |
|
|
| T |
20033999 |
tatgttagatatgctgataagtgtagactgttttatccgaatgatgaaatttcagtaccatttaagaatgatttggtggatcaacaaatgctgtcatttg |
20033900 |
T |
|
| Q |
283 |
ttat |
286 |
Q |
| |
|
|||| |
|
|
| T |
20033899 |
ttat |
20033896 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 133 - 285
Target Start/End: Original strand, 26652121 - 26652273
Alignment:
| Q |
133 |
atgttaggttagcattagacgcagctatggatgattttatttggcgtccatatgttagatatgctgataagtgtggaatgttttatccgaatgaagaaat |
232 |
Q |
| |
|
|||| ||||| |||||||| ||||||| ||||||||||||||||||| |||||| | ||||| |||||||||| | |||||||||| ||||| | || |
|
|
| T |
26652121 |
atgtgaggttggcattagattcagctatcaatgattttatttggcgtccttatgttcggtatgcagataagtgtgaagtgttttatccaaatgacggaac |
26652220 |
T |
|
| Q |
233 |
tttggtgccatttaagaaagatttggtggatcaacaaatgttggcatttgtta |
285 |
Q |
| |
|
|||||| |||||||||||||||||||||||| ||||||| | ||||||||| |
|
|
| T |
26652221 |
tttggtaccatttaagaaagatttggtggatatacaaatgctctcatttgtta |
26652273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 226
Target Start/End: Original strand, 19989934 - 19990027
Alignment:
| Q |
133 |
atgttaggttagcattagacgcagctatggatgattttatttggcgtccatatgttagatatgctgataagtgtggaatgttttatccgaatga |
226 |
Q |
| |
|
|||||||||| | |||| || |||| | | || ||||| ||||||||||||||||||||| |||||| ||||||| | |||||||||| ||||| |
|
|
| T |
19989934 |
atgttaggttggaattaaactcagcaaagaatcattttctttggcgtccatatgttagatttgctgagaagtgtgaactgttttatccaaatga |
19990027 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 58
Target Start/End: Original strand, 30914919 - 30914974
Alignment:
| Q |
3 |
tcacccttttacttggttcaaatttggatgtgggagaggtttaaaaatttacaacc |
58 |
Q |
| |
|
||||||||| ||||||| ||||||||| | ||||||||||| |||||||| ||||| |
|
|
| T |
30914919 |
tcaccctttgacttggtacaaatttgggtttgggagaggttaaaaaatttgcaacc |
30914974 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 121; Significance: 5e-62; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 286
Target Start/End: Original strand, 1717485 - 1717776
Alignment:
| Q |
1 |
aatcacccttttacttggttcaaatttggatgtgggagaggtttaaaaatttacaaccacaac------ccatgccgataaaccatggagaccctttttt |
94 |
Q |
| |
|
||||||||||||||||||||||||||||| ||| || ||||| |||| ||||||| |||||| ||| | || ||||| ||||||||||||| |
|
|
| T |
1717485 |
aatcacccttttacttggttcaaatttgggtgttgggaaggttcaaaagtttacaatcacaactaaaaaccacgatgaccaaccacggagaccctttttg |
1717584 |
T |
|
| Q |
95 |
gtttaggtggcataaggttaagcccttgagaatccacgatgttaggttagcattagacgcagctatggatgattttatttggcgtccatatgttagatat |
194 |
Q |
| |
|
||||||||||| || | ||| ||||| ||| | ||||||||||| |||||||| ||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
1717585 |
gtttaggtggcgtatgagtaaagacttgaaaattgaagatgttaggttgacattagactcagctattgatgattttatttggcgtccatatgttagatat |
1717684 |
T |
|
| Q |
195 |
gctgataagtgtggaatgttttatccgaatgaagaaattttggtgccatttaagaaagatttggtggatcaacaaatgttggcatttgttat |
286 |
Q |
| |
|
||||||||| |||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||| |||||||| || |||||||||| |
|
|
| T |
1717685 |
gctgataagcgtggaatgttttatccatatgatgaaattttggtaccatttaagaaagatttggtggatgaacaaatgctgtcatttgttat |
1717776 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 258
Target Start/End: Original strand, 38483409 - 38483504
Alignment:
| Q |
163 |
atgattttatttggcgtccatatgttagatatgctgataagtgtggaatgttttatccgaatgaagaaattttggtgccatttaagaaagatttgg |
258 |
Q |
| |
|
|||||||| ||| |||||||||| ||||||||| |||||||||||| ||||||||| ||||| | | ||||||| || ||||||||| |||||| |
|
|
| T |
38483409 |
atgattttctttagcgtccatattttagatatgatgataagtgtggtttgttttatcaaaatgatgcacttttggtaccgtttaagaaatatttgg |
38483504 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 118; Significance: 3e-60; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 258
Target Start/End: Original strand, 9815308 - 9815565
Alignment:
| Q |
1 |
aatcacccttttacttggttcaaatttggatgtgggagaggtttaaaaatttacaaccacaacccatgccgataaaccatggagacccttttttgtttag |
100 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||| |||||||| ||| || || ||||||||||| |||||||| |
|
|
| T |
9815308 |
aatcacccttttacttggttcaaatttgggtgtgggagaggttccaaaatttacagccagaacccatgttgatcaatcacggagaccctttattgtttag |
9815407 |
T |
|
| Q |
101 |
gtggcataaggttaagcccttgagaatccacgatgttaggttagcattagacgcagctatggatgattttatttggcgtccatatgttagatatgctgat |
200 |
Q |
| |
|
||| ||||||||| || |||||| ||| || |||||| | | ||||||||| | ||||||||||||||| |||||||||||||| |||||||||||||| |
|
|
| T |
9815408 |
gtgacataaggttcaggccttgaaaattgacaatgttaagctggcattagactcggctatggatgattttctttggcgtccatattttagatatgctgat |
9815507 |
T |
|
| Q |
201 |
aagtgtggaatgttttatccgaatgaagaaattttggtgccatttaagaaagatttgg |
258 |
Q |
| |
|
|| || || |||||||||| ||||| | ||||||| ||||||||||||||||||| |
|
|
| T |
9815508 |
aactgcggtgtgttttatccaaatgatgcgcttttggtaccatttaagaaagatttgg |
9815565 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 258
Target Start/End: Complemental strand, 26354771 - 26354514
Alignment:
| Q |
1 |
aatcacccttttacttggttcaaatttggatgtgggagaggtttaaaaatttacaaccacaacccatgccgataaaccatggagacccttttttgtttag |
100 |
Q |
| |
|
||||||| ||||||||||||||||||||| ||||||||||||| ||||| |||||||| ||||||||| ||| |||| |||||||||||| |||||||| |
|
|
| T |
26354771 |
aatcaccgttttacttggttcaaatttgggtgtgggagaggttcaaaaaattacaaccgcaacccatgttgatcaaccgtggagaccctttattgtttag |
26354672 |
T |
|
| Q |
101 |
gtggcataaggttaagcccttgagaatccacgatgttaggttagcattagacgcagctatggatgattttatttggcgtccatatgttagatatgctgat |
200 |
Q |
| |
|
||||||| ||| | |||||| ||| || |||||| | | | ||||||| ||||| |||||||| |||||||||||||| |||||||||| ||| |
|
|
| T |
26354671 |
atggcatagggtacaagccttgaaaattgacaatgttaagctggaattagacttggctatcaatgattttctttggcgtccatattttagatatgcagat |
26354572 |
T |
|
| Q |
201 |
aagtgtggaatgttttatccgaatgaagaaattttggtgccatttaagaaagatttgg |
258 |
Q |
| |
|
| ||||| | |||||||| ||||| | ||||| ||| ||||||||||||||||||| |
|
|
| T |
26354571 |
gaatgtggtgtattttatccaaatgatgcaatttcggtaccatttaagaaagatttgg |
26354514 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 78; Significance: 2e-36; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 258
Target Start/End: Original strand, 11544344 - 11544601
Alignment:
| Q |
1 |
aatcacccttttacttggttcaaatttggatgtgggagaggtttaaaaatttacaaccacaacccatgccgataaaccatggagacccttttttgtttag |
100 |
Q |
| |
|
|||||||| |||||||||||||| ||||| | ||||||||||| |||||||| |||||| |||||| | ||| ||| ||||||||| | | || | || |
|
|
| T |
11544344 |
aatcacccatttacttggttcaagtttgggtttgggagaggttcaaaaatttgcaaccaaaacccaagttgatcaacaatggagaccatgtactgatgag |
11544443 |
T |
|
| Q |
101 |
gtggcataaggttaagcccttgagaatccacgatgttaggttagcattagacgcagctatggatgattttatttggcgtccatatgttagatatgctgat |
200 |
Q |
| |
|
||||||| |||||| ||||||| ||| | |||| ||||| |||||||| |||||| |||||||||| ||||||| ||||||||| |||||| ||| |
|
|
| T |
11544444 |
gtggcatttggttaaacccttgaaaattgataatgtgaggttggcattagattcagctaaggatgattttctttggcgcccatatgttcaatatgccgat |
11544543 |
T |
|
| Q |
201 |
aagtgtggaatgttttatccgaatgaagaaattttggtgccatttaagaaagatttgg |
258 |
Q |
| |
|
|||| || |||||||||||| ||||| |||| |||||| || ||||||| ||||||| |
|
|
| T |
11544544 |
aagtttgaaatgttttatccaaatgatgaaactttggtaccgcttaagaaggatttgg |
11544601 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 286
Target Start/End: Complemental strand, 22689520 - 22689235
Alignment:
| Q |
1 |
aatcacccttttacttggttcaaatttggatgtgggagaggtttaaaaatttacaaccacaacccatgccgataaaccatggagacccttttttgtttag |
100 |
Q |
| |
|
||||||||||||||||||||||| ||||| ||||||||||||| |||||||| ||||||| |||||| ||| || || ||||| | | || || | |
|
|
| T |
22689520 |
aatcacccttttacttggttcaagtttgggtgtgggagaggttcaaaaatttgcaaccacggcccatgttgatcaatagtgaagaccatgtattattgaa |
22689421 |
T |
|
| Q |
101 |
gtggcataaggttaagcccttgagaatccacgatgttaggttagcattagacgcagctatggatgattttatttggcgtccatatgttagatatgctgat |
200 |
Q |
| |
|
||||||| |||||| | |||| ||| || |||| ||||| | || || || || | ||| |||||||||||||||| |||||||||||||||||| |
|
|
| T |
22689420 |
gtggcatttggttaatgctttgaaaattgacaatgtgaggttgacgttggattcaactgttgataattttatttggcgtccttatgttagatatgctgat |
22689321 |
T |
|
| Q |
201 |
aagtgtggaatgttttatccgaatgaagaaattttggtgccatttaagaaagatttggtggatcaacaaatgttggcatttgttat |
286 |
Q |
| |
|
||||||||| |||||||||| || || ||||||| ||||| | | ||||||||||| |||| ||||||||||| |||||||||| |
|
|
| T |
22689320 |
aagtgtggagtgttttatccaaaggatgaaatttgtgtgccgtcgatgaaagatttggcggataaacaaatgttgtcatttgttat |
22689235 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 258
Target Start/End: Complemental strand, 22655985 - 22655903
Alignment:
| Q |
176 |
gcgtccatatgttagatatgctgataagtgtggaatgttttatccgaatgaagaaattttggtgccatttaagaaagatttgg |
258 |
Q |
| |
|
||||||||||||| ||||| |||||||||| | |||||||||| ||||| ||||||||||| ||||||||||| ||||||| |
|
|
| T |
22655985 |
gcgtccatatgttcgatattctgataagtgcgagctgttttatcctaatgatgaaattttggtaccatttaagaaggatttgg |
22655903 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 11563972 - 11563916
Alignment:
| Q |
1 |
aatcacccttttacttggttcaaatttggatgtgggagaggtttaaaaatttacaac |
57 |
Q |
| |
|
|||||||| ||||||||||| || ||||| | ||||||||||| |||||||| |||| |
|
|
| T |
11563972 |
aatcacccatttacttggttaaagtttggctttgggagaggttcaaaaatttgcaac |
11563916 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 2 - 258
Target Start/End: Complemental strand, 6397582 - 6397324
Alignment:
| Q |
2 |
atcacccttttacttggttcaaatttggatgtgggagaggtttaaaaatttacaaccacaacccatgccgataaaccatggagacccttttttgtttagg |
101 |
Q |
| |
|
|||||| ||||||||||||||| ||||| |||| ||||||| | | |||| | ||||||| ||| ||| | ||| ||||||||| || |||||| |
|
|
| T |
6397582 |
atcacctttttacttggttcaagtttgggcgtggaagaggttcacacatttgcgttcacaacctatgttgattacccacatagaccctttattttttagg |
6397483 |
T |
|
| Q |
102 |
tggcataaggttaagcccttgagaatccacgatgttaggttagcattagacgcagctatggatgattttatttggcgtccatatgttagatatgctgata |
201 |
Q |
| |
|
||| |||||||| || |||| | ||| || || ||| ||| |||| |||| || || | ||| ||||| ||||||||||||||||||||||| |||| | |
|
|
| T |
6397482 |
tggtataaggttcaggcctttaaaattgacaatattaagttggcatgagactcaactgtcgataattttctttggcgtccatatgttagatatcctgaga |
6397383 |
T |
|
| Q |
202 |
agtgtggaat--gttttatccgaatgaagaaattttggtgccatttaagaaagatttgg |
258 |
Q |
| |
|
|||||||||| |||||||| ||| | ||||| ||||| ||||||||||| ||||||| |
|
|
| T |
6397382 |
agtgtggaattctttttatccaaataacgaaatcttggtaccatttaagaaggatttgg |
6397324 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 258
Target Start/End: Complemental strand, 12495677 - 12495578
Alignment:
| Q |
163 |
atgattttatttggcgtccatatgttagatatgctgataagtgtggaa----tgttttatccgaatgaagaaattttggtgccatttaagaaagatttgg |
258 |
Q |
| |
|
|||||||| ||||||||||||||| ||||||| |||| |||||||||| | |||||||| ||| | ||||||| ||| ||||||||||| ||||||| |
|
|
| T |
12495677 |
atgattttctttggcgtccatatgctagatatcctgagaagtgtggaattttttttttatccaaataatgaaatttgggtaccatttaagaaggatttgg |
12495578 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 83 - 258
Target Start/End: Complemental strand, 12579853 - 12579676
Alignment:
| Q |
83 |
agacccttttttgtttaggtggcataaggttaagcccttgagaatccacgatgttaggttagcattagacgcagctatggatgattttatttggcgtcca |
182 |
Q |
| |
|
||||||||| ||| |||||| | |||||||| || ||||| ||| || |||||| ||| ||||||||| || | | |||||||| |||| |||||| |
|
|
| T |
12579853 |
agaccctttattgcttaggttgaataaggttcaggccttgcaaattgacaatgttaagtttgcattagactcaagtgttaatgattttctttgacgtcca |
12579754 |
T |
|
| Q |
183 |
tatgttagatatgctgataagtgtggaa--tgttttatccgaatgaagaaattttggtgccatttaagaaagatttgg |
258 |
Q |
| |
|
|||| ||||||| || | |||||||||| | |||||||| ||| | ||||||| ||| ||||||||||| ||||||| |
|
|
| T |
12579753 |
tatgctagatatcctaagaagtgtggaatttcttttatccaaataatgaaatttgggtaccatttaagaaggatttgg |
12579676 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 258
Target Start/End: Complemental strand, 12519478 - 12519382
Alignment:
| Q |
163 |
atgattttatttggcgtccatatgttagatatgctgataagtgtggaa--tgttttatccgaatgaagaaattttggtgccatttaagaaagatttgg |
258 |
Q |
| |
|
|||||||| |||| |||||||||| ||||||| |||| |||||||||| | |||||||| ||| | ||||||| ||| ||||||||||| ||||||| |
|
|
| T |
12519478 |
atgattttctttg-cgtccatatgctagatatcctgagaagtgtggaattttttttatccaaataatgaaatttgggtaccatttaagaaggatttgg |
12519382 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 156 - 258
Target Start/End: Complemental strand, 39191702 - 39191598
Alignment:
| Q |
156 |
gctatggatgattttatttggcgtccatatgttagatatgctgat-aagtgt-ggaatgttttatccgaatgaagaaattttggtgccatttaagaaaga |
253 |
Q |
| |
|
|||| |||||||||| ||||||||||||||||| |||||||||| |||||| | |||||||||||| || || |||| |||||| || ||||||| || |
|
|
| T |
39191702 |
gctaaggatgattttctttggcgtccatatgttcaatatgctgataaagtgtagaaatgttttatccaaaggatgaaactttggtaccgcttaagaagga |
39191603 |
T |
|
| Q |
254 |
tttgg |
258 |
Q |
| |
|
||||| |
|
|
| T |
39191602 |
tttgg |
39191598 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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