View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15455_high_15 (Length: 228)
Name: NF15455_high_15
Description: NF15455
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15455_high_15 |
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Alignment Details
Target: chr4 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 17 - 191
Target Start/End: Complemental strand, 5503995 - 5503821
Alignment:
| Q |
17 |
gtatggtttgtaatttatttggtttaagtaagcaggttcttgtgttctttcgtttgactggtacgtacaaataaaaagagagaatggtagatgctatttg |
116 |
Q |
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| T |
5503995 |
gtatggtttgtaatttatttggttgaagcaagcaggttcttgtgttctttcgtttgactggtacgtacaaataaaaagagagaatggtagatgctatttg |
5503896 |
T |
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| Q |
117 |
tgatatatttctgcttattgattatggattgtagatttgatcagggttgcataactctaatttgtgtattcataa |
191 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5503895 |
tgatatatttctgcttattgattatggattgtagatttgatcagggttgcataactctaatttgtgtattcataa |
5503821 |
T |
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