View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15456_high_34 (Length: 320)

Name: NF15456_high_34
Description: NF15456
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15456_high_34
NF15456_high_34
[»] chr5 (24 HSPs)
chr5 (14-308)||(1511483-1511777)
chr5 (118-173)||(7016932-7016987)
chr5 (118-172)||(32158134-32158188)
chr5 (120-173)||(4550494-4550547)
chr5 (120-173)||(7948554-7948607)
chr5 (120-173)||(13925847-13925900)
chr5 (120-173)||(14000342-14000395)
chr5 (120-173)||(37013830-37013883)
chr5 (122-173)||(1152342-1152393)
chr5 (118-173)||(6460708-6460763)
chr5 (118-173)||(9689577-9689631)
chr5 (118-173)||(21146983-21147038)
chr5 (118-173)||(33656278-33656333)
chr5 (120-173)||(4240689-4240742)
chr5 (120-173)||(26795638-26795691)
chr5 (118-173)||(43319162-43319218)
chr5 (131-173)||(27786236-27786278)
chr5 (118-171)||(139191-139244)
chr5 (118-151)||(849169-849202)
chr5 (124-173)||(5949025-5949074)
chr5 (131-172)||(22746214-22746255)
chr5 (120-173)||(26806702-26806755)
chr5 (120-172)||(26806581-26806633)
chr5 (122-173)||(28594449-28594501)
[»] chr7 (47 HSPs)
chr7 (118-173)||(34695148-34695203)
chr7 (118-173)||(10676613-10676668)
chr7 (118-173)||(18914970-18915025)
chr7 (118-173)||(29893033-29893088)
chr7 (118-173)||(44343631-44343686)
chr7 (118-172)||(39219570-39219624)
chr7 (118-172)||(43581325-43581379)
chr7 (120-173)||(509608-509661)
chr7 (120-173)||(7993052-7993105)
chr7 (120-173)||(29615001-29615054)
chr7 (120-173)||(37327837-37327890)
chr7 (120-173)||(40460944-40460997)
chr7 (120-173)||(48117830-48117883)
chr7 (120-172)||(39028008-39028060)
chr7 (118-173)||(8078312-8078367)
chr7 (122-173)||(23101208-23101259)
chr7 (122-173)||(28342257-28342308)
chr7 (118-173)||(30440713-30440768)
chr7 (118-173)||(31638792-31638847)
chr7 (122-173)||(41827224-41827275)
chr7 (118-173)||(43187578-43187633)
chr7 (120-173)||(3634239-3634292)
chr7 (120-173)||(9882473-9882526)
chr7 (120-173)||(17001260-17001313)
chr7 (120-173)||(21067792-21067845)
chr7 (120-173)||(33382547-33382600)
chr7 (120-173)||(39784009-39784062)
chr7 (120-172)||(46405668-46405720)
chr7 (118-173)||(727429-727484)
chr7 (124-179)||(7719502-7719557)
chr7 (118-173)||(10068376-10068431)
chr7 (118-173)||(12963611-12963666)
chr7 (118-173)||(19251449-19251504)
chr7 (122-173)||(20275502-20275553)
chr7 (118-173)||(47879085-47879140)
chr7 (118-173)||(47914183-47914238)
chr7 (118-148)||(10068443-10068473)
chr7 (118-172)||(12893326-12893380)
chr7 (118-148)||(12893434-12893464)
chr7 (118-148)||(44623427-44623457)
chr7 (118-151)||(973123-973156)
chr7 (120-173)||(3022836-3022889)
chr7 (120-173)||(18838299-18838352)
chr7 (124-173)||(33892492-33892541)
chr7 (120-173)||(37973011-37973064)
chr7 (118-151)||(43679409-43679442)
chr7 (118-173)||(32143154-32143210)
[»] chr4 (44 HSPs)
chr4 (118-173)||(20021259-20021314)
chr4 (118-173)||(28541613-28541668)
chr4 (118-178)||(25331041-25331101)
chr4 (118-173)||(24131208-24131263)
chr4 (118-173)||(32951072-32951127)
chr4 (118-173)||(34228818-34228873)
chr4 (120-173)||(5441319-5441372)
chr4 (120-173)||(37828640-37828693)
chr4 (120-173)||(37915700-37915753)
chr4 (120-173)||(54341059-54341112)
chr4 (118-173)||(1044725-1044780)
chr4 (118-173)||(22201930-22201985)
chr4 (118-173)||(23987171-23987226)
chr4 (118-173)||(25504875-25504930)
chr4 (122-173)||(27767971-27768022)
chr4 (118-173)||(30009913-30009968)
chr4 (118-172)||(7250009-7250063)
chr4 (118-172)||(39479593-39479647)
chr4 (118-172)||(49469237-49469291)
chr4 (120-173)||(28483898-28483951)
chr4 (120-173)||(29649905-29649958)
chr4 (120-173)||(30967537-30967590)
chr4 (124-173)||(49835055-49835104)
chr4 (118-178)||(19741144-19741203)
chr4 (118-173)||(41881319-41881375)
chr4 (118-173)||(42786682-42786738)
chr4 (118-173)||(46635878-46635934)
chr4 (120-172)||(54853706-54853758)
chr4 (118-173)||(7007288-7007343)
chr4 (118-173)||(12913138-12913193)
chr4 (122-173)||(39307451-39307502)
chr4 (118-173)||(40537381-40537436)
chr4 (118-172)||(28370882-28370936)
chr4 (118-172)||(37046688-37046742)
chr4 (120-178)||(41762000-41762058)
chr4 (118-151)||(23464892-23464925)
chr4 (120-173)||(31314966-31315019)
chr4 (120-173)||(38230798-38230851)
chr4 (118-173)||(1112807-1112863)
chr4 (120-171)||(28100587-28100639)
chr4 (122-170)||(32322009-32322057)
chr4 (118-154)||(36479425-36479461)
chr4 (118-154)||(44771048-44771084)
chr4 (120-172)||(51320837-51320889)
[»] chr3 (39 HSPs)
chr3 (118-173)||(35337650-35337705)
chr3 (118-173)||(996321-996376)
chr3 (118-173)||(3206432-3206487)
chr3 (118-173)||(12734076-12734131)
chr3 (118-173)||(19253742-19253797)
chr3 (118-173)||(37820713-37820768)
chr3 (118-173)||(44762273-44762328)
chr3 (118-172)||(10728835-10728889)
chr3 (120-173)||(10660450-10660503)
chr3 (120-173)||(11431441-11431494)
chr3 (120-173)||(23753624-23753677)
chr3 (120-173)||(27240481-27240534)
chr3 (120-173)||(31646522-31646575)
chr3 (120-173)||(36674368-36674421)
chr3 (120-173)||(44906751-44906804)
chr3 (120-172)||(18749486-18749538)
chr3 (118-173)||(10139382-10139437)
chr3 (118-173)||(15493967-15494022)
chr3 (118-173)||(20498125-20498179)
chr3 (118-173)||(29449096-29449151)
chr3 (120-173)||(2024122-2024175)
chr3 (120-173)||(10105019-10105072)
chr3 (120-173)||(10216166-10216219)
chr3 (120-173)||(10225795-10225848)
chr3 (120-173)||(39842667-39842720)
chr3 (120-173)||(50762288-50762341)
chr3 (120-173)||(54628758-54628811)
chr3 (122-170)||(17946248-17946296)
chr3 (122-173)||(38772292-38772343)
chr3 (118-173)||(40246759-40246814)
chr3 (122-173)||(52618205-52618256)
chr3 (118-173)||(52810335-52810390)
chr3 (123-173)||(6035293-6035343)
chr3 (119-173)||(29029921-29029975)
chr3 (120-173)||(1440190-1440242)
chr3 (120-173)||(28146264-28146317)
chr3 (120-173)||(46749277-46749330)
chr3 (120-173)||(50903481-50903534)
chr3 (120-172)||(10225674-10225726)
[»] chr2 (25 HSPs)
chr2 (118-173)||(16269608-16269663)
chr2 (118-173)||(14198814-14198869)
chr2 (118-173)||(24776272-24776327)
chr2 (118-173)||(32125167-32125222)
chr2 (120-173)||(215465-215518)
chr2 (120-173)||(378896-378949)
chr2 (120-173)||(26788701-26788754)
chr2 (120-173)||(28844472-28844525)
chr2 (118-178)||(26601438-26601498)
chr2 (122-173)||(12407297-12407348)
chr2 (118-173)||(20605069-20605124)
chr2 (122-173)||(22552005-22552056)
chr2 (118-173)||(31170862-31170917)
chr2 (118-173)||(35316979-35317034)
chr2 (122-173)||(43078592-43078643)
chr2 (118-173)||(44765692-44765747)
chr2 (118-174)||(305704-305761)
chr2 (120-173)||(3463588-3463641)
chr2 (124-173)||(28740527-28740576)
chr2 (120-173)||(33135540-33135593)
chr2 (120-172)||(3574765-3574817)
chr2 (118-173)||(9120085-9120140)
chr2 (120-173)||(7026520-7026574)
chr2 (118-147)||(8172163-8172192)
chr2 (120-173)||(13833662-13833715)
[»] scaffold0110 (1 HSPs)
scaffold0110 (120-173)||(39855-39908)
[»] chr1 (39 HSPs)
chr1 (118-178)||(22183274-22183334)
chr1 (118-173)||(953728-953783)
chr1 (118-173)||(28824608-28824663)
chr1 (118-173)||(35279581-35279636)
chr1 (118-172)||(49198503-49198557)
chr1 (122-172)||(50192791-50192841)
chr1 (120-173)||(6312483-6312536)
chr1 (120-173)||(8141366-8141419)
chr1 (120-173)||(9322738-9322791)
chr1 (120-173)||(15835291-15835344)
chr1 (120-172)||(29219198-29219250)
chr1 (120-172)||(29396626-29396678)
chr1 (118-173)||(19452086-19452141)
chr1 (118-173)||(21222057-21222112)
chr1 (118-173)||(35679364-35679419)
chr1 (120-178)||(6304492-6304550)
chr1 (118-172)||(47780529-47780583)
chr1 (120-173)||(18798400-18798453)
chr1 (120-173)||(19007584-19007637)
chr1 (120-173)||(25612066-25612119)
chr1 (120-173)||(28387631-28387684)
chr1 (120-173)||(42657740-42657793)
chr1 (120-173)||(49230795-49230848)
chr1 (118-173)||(730058-730112)
chr1 (118-169)||(14494122-14494173)
chr1 (118-173)||(38536283-38536338)
chr1 (118-173)||(38558501-38558556)
chr1 (118-173)||(45760246-45760301)
chr1 (118-173)||(49417993-49418048)
chr1 (118-148)||(19451960-19451990)
chr1 (120-154)||(48177700-48177734)
chr1 (120-173)||(5495334-5495387)
chr1 (120-173)||(9577670-9577723)
chr1 (115-148)||(29219264-29219297)
chr1 (124-173)||(42290753-42290802)
chr1 (124-173)||(46327951-46328000)
chr1 (120-173)||(48194616-48194669)
chr1 (120-173)||(48203374-48203427)
chr1 (118-173)||(47654589-47654645)
[»] scaffold0306 (1 HSPs)
scaffold0306 (118-173)||(13840-13895)
[»] scaffold0152 (1 HSPs)
scaffold0152 (118-173)||(21432-21487)
[»] chr8 (28 HSPs)
chr8 (118-173)||(7507134-7507189)
chr8 (118-173)||(23115403-23115458)
chr8 (118-173)||(26373721-26373776)
chr8 (118-173)||(41479013-41479068)
chr8 (118-173)||(42735512-42735567)
chr8 (118-179)||(2705054-2705115)
chr8 (120-173)||(14782372-14782425)
chr8 (120-173)||(39467704-39467757)
chr8 (120-173)||(44726047-44726100)
chr8 (118-178)||(24214826-24214886)
chr8 (118-173)||(26374663-26374718)
chr8 (118-173)||(42938352-42938407)
chr8 (120-173)||(4031495-4031548)
chr8 (120-173)||(7466251-7466304)
chr8 (120-173)||(10295618-10295671)
chr8 (120-173)||(16362112-16362165)
chr8 (120-173)||(18958964-18959017)
chr8 (120-173)||(19718118-19718171)
chr8 (120-173)||(32497399-32497452)
chr8 (124-173)||(42937276-42937325)
chr8 (118-178)||(43959568-43959629)
chr8 (122-178)||(24502010-24502066)
chr8 (118-170)||(32711517-32711569)
chr8 (122-173)||(42306024-42306075)
chr8 (120-154)||(18306198-18306232)
chr8 (120-173)||(43166885-43166938)
chr8 (120-172)||(31623612-31623664)
chr8 (124-172)||(43308520-43308568)
[»] chr6 (16 HSPs)
chr6 (118-173)||(2300973-2301028)
chr6 (120-173)||(31895611-31895664)
chr6 (120-173)||(34773324-34773377)
chr6 (118-178)||(1391534-1391594)
chr6 (118-173)||(7051760-7051815)
chr6 (118-173)||(6197713-6197768)
chr6 (122-173)||(14262672-14262723)
chr6 (118-172)||(28002581-28002635)
chr6 (120-173)||(5957152-5957205)
chr6 (120-173)||(7100190-7100243)
chr6 (120-173)||(8636699-8636752)
chr6 (120-173)||(8794387-8794440)
chr6 (120-173)||(31609697-31609750)
chr6 (121-173)||(11007688-11007740)
chr6 (118-173)||(29076512-29076568)
chr6 (118-173)||(29111485-29111541)
[»] scaffold0543 (1 HSPs)
scaffold0543 (120-173)||(10476-10529)
[»] scaffold0347 (1 HSPs)
scaffold0347 (120-173)||(14811-14864)
[»] scaffold0042 (1 HSPs)
scaffold0042 (120-173)||(58272-58325)
[»] scaffold0151 (1 HSPs)
scaffold0151 (118-173)||(38756-38811)
[»] scaffold0113 (1 HSPs)
scaffold0113 (122-173)||(39093-39144)
[»] scaffold0054 (1 HSPs)
scaffold0054 (118-173)||(37059-37114)
[»] scaffold1504 (1 HSPs)
scaffold1504 (120-173)||(779-832)
[»] scaffold0922 (1 HSPs)
scaffold0922 (120-173)||(4116-4169)
[»] scaffold0287 (1 HSPs)
scaffold0287 (120-173)||(11793-11846)
[»] scaffold0400 (1 HSPs)
scaffold0400 (118-169)||(15269-15320)
[»] scaffold0365 (1 HSPs)
scaffold0365 (118-169)||(15912-15963)
[»] scaffold0651 (1 HSPs)
scaffold0651 (120-173)||(8678-8731)


Alignment Details
Target: chr5 (Bit Score: 247; Significance: 1e-137; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 14 - 308
Target Start/End: Original strand, 1511483 - 1511777
Alignment:
Q  14 aactaacacagagtcttgattgagtatcacgggtcttaatttaagctacaaaaagtcttgattagagttttgattgaatatgacaaagtttttctttaag 113  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  1511483 aactaacacagagttttgattgagtatcacgggtcttaatttaagctacaaaaagtcttgattagagtcttgattgaatatgacaaagcttttctttaag 1511582  T
Q  114 ggacagagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatcgtttacggtcttaattgacagcacctcctaaatgaaaaac 213  Q
    |||||||||||||||| || |||||||||||||||||||||| ||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  1511583 ggacagagtcttgattgaacaccacaagactttttcataataaaaatgtcttttaaaatcctttacgatcttaattgacagcacctcctaaatgaaaaac 1511682  T
Q  214 tatgtgtaaaaaataaattgaagaactattaccaaaaccacaaatcccctttatgatgaatttttacctagttattgaatgcagacacaattttc 308  Q
    ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  1511683 tatttgtaaaaaataaattgaaaaactattaccaaaaccacaaatcccctttatgatgtatttttacctagttattgaatgcagacacaattttc 1511777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 173
Target Start/End: Original strand, 7016932 - 7016987
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||| ||||||||||||||||||||| ||| ||| |||||||||||||    
T  7016932 agagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatc 7016987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 118 - 172
Target Start/End: Original strand, 32158134 - 32158188
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaat 172  Q
    |||||||||||| ||||||||||||||||||||| ||| ||| ||||||||||||    
T  32158134 agagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaat 32158188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 4550494 - 4550547
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| ||||||||||||||||||||||||  ||| |||||||||||||    
T  4550494 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatc 4550547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 7948554 - 7948607
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| |||||||| |||||||||||||||| ||| |||||||||||||    
T  7948554 agtcttgattgaataccacgagactttttcataataaaaaagtcttttaaaatc 7948607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 13925900 - 13925847
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||||||||||||||||||||||||||  |||  ||||||||||||    
T  13925900 agtcttgattaaataccacaagactttttcataattaaaaaatcttttaaaatc 13925847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 14000342 - 14000395
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| ||||||||||||||||||||||||  ||| |||||||||||||    
T  14000342 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatc 14000395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 37013883 - 37013830
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| ||||||||||||||||||||||||  ||| |||||||||||||    
T  37013883 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatc 37013830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 173
Target Start/End: Original strand, 1152342 - 1152393
Alignment:
Q  122 tcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    ||||||||||||||||||||| |||||||||||  ||| |||||||||||||    
T  1152342 tcttgattaaataccacaagattttttcataattaaaaagtcttttaaaatc 1152393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 173
Target Start/End: Complemental strand, 6460763 - 6460708
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||| ||||||||||||||||||||| ||| |||  ||||||||||||    
T  6460763 agagtcttgattgaataccacaagactttttcattataaaaaaatcttttaaaatc 6460708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 173
Target Start/End: Complemental strand, 9689631 - 9689577
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||| ||||||||    
T  9689631 agagtcttgattgaataccacaagactttttcataata-aaaagtctattaaaatc 9689577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 173
Target Start/End: Complemental strand, 21147038 - 21146983
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||| ||||||||| ||||||||||| ||| ||| |||||||||||||    
T  21147038 agagtcttgattgaataccacacgactttttcatgataaaaaagtcttttaaaatc 21146983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 173
Target Start/End: Original strand, 33656278 - 33656333
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||| ||||||||||||||||||||| ||| |||  ||||||||||||    
T  33656278 agagtcttgattgaataccacaagactttttcatgataaaaaaatcttttaaaatc 33656333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 4240689 - 4240742
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| |||||||||| |||||||||||||  ||| |||||||||||||    
T  4240689 agtcttgattgaataccacaaaactttttcataattaaaaagtcttttaaaatc 4240742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 26795638 - 26795691
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| |||||||||||| ||||| |||||| ||| |||||||||||||    
T  26795638 agtcttgattgaataccacaagatttttttataataaaaaagtcttttaaaatc 26795691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 173
Target Start/End: Complemental strand, 43319218 - 43319162
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataat-agaaaggtcttttaaaatc 173  Q
    |||||||||||| ||||||||||||||||||||| || | ||| |||||||||||||    
T  43319218 agagtcttgattgaataccacaagactttttcatgataaaaaaagtcttttaaaatc 43319162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 173
Target Start/End: Complemental strand, 27786278 - 27786236
Alignment:
Q  131 aataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||||||||| |||||| ||| |||||||||||||    
T  27786278 aataccacaagacttttttataataaaaaagtcttttaaaatc 27786236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 171
Target Start/End: Complemental strand, 139244 - 139191
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaa 171  Q
    |||||||||||| ||||| | ||||||||||||| ||| ||| |||||||||||    
T  139244 agagtcttgattgaatactaaaagactttttcattataaaaaagtcttttaaaa 139191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 151
Target Start/End: Complemental strand, 849202 - 849169
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcat 151  Q
    |||||||||||| |||||||||||||||||||||    
T  849202 agagtcttgattgaataccacaagactttttcat 849169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 173
Target Start/End: Complemental strand, 5949074 - 5949025
Alignment:
Q  124 ttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||| |||||||||| | |||||||||||  |||||||||||||||||    
T  5949074 ttgattgaataccacaaaaatttttcataattaaaaggtcttttaaaatc 5949025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 22746255 - 22746214
Alignment:
Q  131 aataccacaagactttttcataatagaaaggtcttttaaaat 172  Q
    ||||||||||||||||||||||||  ||| ||||||||||||    
T  22746255 aataccacaagactttttcataattaaaaagtcttttaaaat 22746214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 26806702 - 26806755
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| |||| ||||||| ||||| |||||| ||| |||||||||||||    
T  26806702 agtcttgattgaatatcacaagatttttttataataaaaaagtcttttaaaatc 26806755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 26806581 - 26806633
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaat 172  Q
    |||||||||| |||||||||||||||||| |||||  ||| || |||||||||    
T  26806581 agtcttgattgaataccacaagacttttttataatcaaaaagttttttaaaat 26806633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 173
Target Start/End: Original strand, 28594449 - 28594501
Alignment:
Q  122 tcttgattaaataccacaagactttttcataat-agaaaggtcttttaaaatc 173  Q
    |||||||| |||||||||||||||||| ||||| | ||| |||||||||||||    
T  28594449 tcttgattgaataccacaagacttttttataataaaaaaagtcttttaaaatc 28594501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 5e-16; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 118 - 173
Target Start/End: Complemental strand, 34695203 - 34695148
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||    
T  34695203 agagtcttgattgaataccacaagactttttcataataaaaaagtcttttaaaatc 34695148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 173
Target Start/End: Original strand, 10676613 - 10676668
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    ||||||||||||||||||||||||| |||||||||||  ||| |||||||||||||    
T  10676613 agagtcttgattaaataccacaagattttttcataattaaaaagtcttttaaaatc 10676668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 173
Target Start/End: Original strand, 18914970 - 18915025
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||| ||||||||||||||||||||| ||| ||| |||||||||||||    
T  18914970 agagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatc 18915025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 173
Target Start/End: Complemental strand, 29893088 - 29893033
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||| ||||||||||||||||||||||||  ||| |||||||||||||    
T  29893088 agagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatc 29893033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 173
Target Start/End: Original strand, 44343631 - 44343686
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||| ||||||||||||||||||||| ||| ||| |||||||||||||    
T  44343631 agagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatc 44343686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 118 - 172
Target Start/End: Original strand, 39219570 - 39219624
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaat 172  Q
    |||||||||||| ||||||||||||||||||||| ||| ||| ||||||||||||    
T  39219570 agagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaat 39219624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 118 - 172
Target Start/End: Original strand, 43581325 - 43581379
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaat 172  Q
    |||||||||||| ||||||||||||||||||||| ||| ||| ||||||||||||    
T  43581325 agagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaat 43581379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 509661 - 509608
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| ||||||||||||||||||||||||  ||| |||||||||||||    
T  509661 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatc 509608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 7993105 - 7993052
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| ||||||||||||||||||||||||  ||| |||||||||||||    
T  7993105 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatc 7993052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 29615001 - 29615054
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| ||||||||||||||||||||||||  ||| |||||||||||||    
T  29615001 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatc 29615054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 37327890 - 37327837
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| ||||||||||||||||||||||||  ||| |||||||||||||    
T  37327890 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatc 37327837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 40460944 - 40460997
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    ||||||||||||||||||||| |||||||||||||  ||| |||||||||||||    
T  40460944 agtcttgattaaataccacaaaactttttcataattaaaaagtcttttaaaatc 40460997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 48117830 - 48117883
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| ||||||||||||||||||||||||  ||| |||||||||||||    
T  48117830 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatc 48117883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 120 - 172
Target Start/End: Complemental strand, 39028060 - 39028008
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaat 172  Q
    |||||||||| ||||||||||||||||||||||||  ||| ||||||||||||    
T  39028060 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaat 39028008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 173
Target Start/End: Complemental strand, 8078367 - 8078312
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||| |||||||||||||||||| || ||| ||| |||||||||||||    
T  8078367 agagtcttgattgaataccacaagacttttttatgataaaaaagtcttttaaaatc 8078312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 173
Target Start/End: Complemental strand, 23101259 - 23101208
Alignment:
Q  122 tcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||| ||||||||||||||||||||||||  ||| |||||||||||||    
T  23101259 tcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatc 23101208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 173
Target Start/End: Complemental strand, 28342308 - 28342257
Alignment:
Q  122 tcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||| ||||||||||||||||||||||||  ||| |||||||||||||    
T  28342308 tcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatc 28342257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 173
Target Start/End: Complemental strand, 30440768 - 30440713
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||| |||||||||||| |||||||| ||| ||| |||||||||||||    
T  30440768 agagtcttgattgaataccacaagattttttcatgataaaaaagtcttttaaaatc 30440713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 173
Target Start/End: Complemental strand, 31638847 - 31638792
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||| ||||||||| ||||||||||| ||| ||| |||||||||||||    
T  31638847 agagtcttgattgaataccacatgactttttcatgataaaaaagtcttttaaaatc 31638792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 173
Target Start/End: Complemental strand, 41827275 - 41827224
Alignment:
Q  122 tcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||| ||||||||||||||||||||||||  ||| |||||||||||||    
T  41827275 tcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatc 41827224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 173
Target Start/End: Original strand, 43187578 - 43187633
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||| |||||||||||||| |||||||||  ||| |||||||||||||    
T  43187578 agagtcttgattgaataccacaagactctttcataattaaaaagtcttttaaaatc 43187633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 3634292 - 3634239
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| |||| ||||||||||||| |||||| ||| |||||||||||||    
T  3634292 agtcttgattgaatatcacaagacttttttataataaaaaagtcttttaaaatc 3634239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 9882473 - 9882526
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| ||||||| ||||||||||||||||  ||| |||||||||||||    
T  9882473 agtcttgattgaataccataagactttttcataattaaaaagtcttttaaaatc 9882526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 17001260 - 17001313
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| ||||||||||||||||||||||||  ||| || ||||||||||    
T  17001260 agtcttgattgaataccacaagactttttcataattaaaaagttttttaaaatc 17001313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 21067845 - 21067792
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| ||||||||||||||||||||||||  |||  ||||||||||||    
T  21067845 agtcttgattgaataccacaagactttttcataattaaaaaatcttttaaaatc 21067792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 33382600 - 33382547
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| ||||||| ||||||||||||||||  ||| |||||||||||||    
T  33382600 agtcttgattgaataccataagactttttcataattaaaaagtcttttaaaatc 33382547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 39784062 - 39784009
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| ||||||||| ||||||||||||||  ||| |||||||||||||    
T  39784062 agtcttgattgaataccacatgactttttcataattaaaaagtcttttaaaatc 39784009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 46405668 - 46405720
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaat 172  Q
    |||||||||| ||||||||| ||||||||||||||  ||| ||||||||||||    
T  46405668 agtcttgattgaataccacatgactttttcataattaaaaagtcttttaaaat 46405720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 173
Target Start/End: Complemental strand, 727484 - 727429
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||| |||||| |||||||||||||| ||| ||| ||| |||||||||    
T  727484 agagtcttgattgaataccgcaagactttttcatgataaaaaagtcatttaaaatc 727429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 124 - 179
Target Start/End: Original strand, 7719502 - 7719557
Alignment:
Q  124 ttgattaaataccacaagactttttcataatagaaaggtcttttaaaatcgtttac 179  Q
    |||||| |||||||||||| |||||||| ||| ||| ||||||||||||| |||||    
T  7719502 ttgattgaataccacaagaatttttcatgataaaaaagtcttttaaaatcttttac 7719557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 173
Target Start/End: Complemental strand, 10068431 - 10068376
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    ||||| |||||| |||| |||||||||||||||||||  ||| |||||||||||||    
T  10068431 agagttttgattgaatatcacaagactttttcataattaaaaagtcttttaaaatc 10068376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 173
Target Start/End: Complemental strand, 12963666 - 12963611
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||| | ||||||||||||||||| ||||  ||| |||||||||||||    
T  12963666 agagtcttgattgagtaccacaagactttttcgtaattaaaaagtcttttaaaatc 12963611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 173
Target Start/End: Complemental strand, 19251504 - 19251449
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||| ||||| ||||||||||||| ||||  ||| |||||||||||||    
T  19251504 agagtcttgattgaatactacaagactttttcgtaattaaaaagtcttttaaaatc 19251449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 173
Target Start/End: Original strand, 20275502 - 20275553
Alignment:
Q  122 tcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||| ||||||||||||||| ||||| ||| ||| |||||||||||||    
T  20275502 tcttgattgaataccacaagacttattcatgataaaaaagtcttttaaaatc 20275553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 173
Target Start/End: Complemental strand, 47879140 - 47879085
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    ||||| |||||| ||||||||||||||||||||| ||| | | |||||||||||||    
T  47879140 agagtattgattgaataccacaagactttttcattataaataagtcttttaaaatc 47879085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 173
Target Start/End: Complemental strand, 47914238 - 47914183
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    ||||| |||||| ||||||||||||||||||||| ||| | | |||||||||||||    
T  47914238 agagtattgattgaataccacaagactttttcattataaataagtcttttaaaatc 47914183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 148
Target Start/End: Complemental strand, 10068473 - 10068443
Alignment:
Q  118 agagtcttgattaaataccacaagacttttt 148  Q
    |||||||||||||||||||||||||||||||    
T  10068473 agagtcttgattaaataccacaagacttttt 10068443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 172
Target Start/End: Complemental strand, 12893380 - 12893326
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaat 172  Q
    |||||||||||| ||||||||||||||||||||| | | |||  |||||||||||    
T  12893380 agagtcttgattgaataccacaagactttttcatgaaaaaaaaatcttttaaaat 12893326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 148
Target Start/End: Complemental strand, 12893464 - 12893434
Alignment:
Q  118 agagtcttgattaaataccacaagacttttt 148  Q
    |||||||||||||||||||||||||||||||    
T  12893464 agagtcttgattaaataccacaagacttttt 12893434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 148
Target Start/End: Original strand, 44623427 - 44623457
Alignment:
Q  118 agagtcttgattaaataccacaagacttttt 148  Q
    |||||||||||||||||||||||||||||||    
T  44623427 agagtcttgattaaataccacaagacttttt 44623457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 151
Target Start/End: Complemental strand, 973156 - 973123
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcat 151  Q
    |||||||||||| |||||||||||||||||||||    
T  973156 agagtcttgattgaataccacaagactttttcat 973123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 3022889 - 3022836
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||||||||| || |||||||||||||  |||  ||||||||||||    
T  3022889 agtcttgattaaataccataaaactttttcataattaaaaaatcttttaaaatc 3022836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 18838352 - 18838299
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| ||||||||||||| ||||||||||  ||| |||||||| ||||    
T  18838352 agtcttgattgaataccacaagacattttcataattaaaaagtcttttataatc 18838299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 173
Target Start/End: Original strand, 33892492 - 33892541
Alignment:
Q  124 ttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||| |||||||||| |||||||||||||  ||| |||||||||||||    
T  33892492 ttgattgaataccacaaaactttttcataattaaaaagtcttttaaaatc 33892541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 37973011 - 37973064
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| |||||||||||||| |||||||||  ||| || ||||||||||    
T  37973011 agtcttgattgaataccacaagactctttcataattaaaaagtattttaaaatc 37973064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 151
Target Start/End: Complemental strand, 43679442 - 43679409
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcat 151  Q
    |||||||||||| |||||||||||||||||||||    
T  43679442 agagtcttgattgaataccacaagactttttcat 43679409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 173
Target Start/End: Original strand, 32143154 - 32143210
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataat-agaaaggtcttttaaaatc 173  Q
    |||||||||||| |||| |||||||||||||||| || | ||| |||||||||||||    
T  32143154 agagtcttgattgaatatcacaagactttttcatgataaaaaaagtcttttaaaatc 32143210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 5e-16; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 118 - 173
Target Start/End: Complemental strand, 20021314 - 20021259
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||||||||||||||||||||||||||||  ||| |||||||||||||    
T  20021314 agagtcttgattaaataccacaagactttttcataattaaaaagtcttttaaaatc 20021259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 118 - 173
Target Start/End: Complemental strand, 28541668 - 28541613
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||    
T  28541668 agagtcttgattgaataccacaagactttttcataataaaaatgtcttttaaaatc 28541613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 25331101 - 25331041
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatcgttta 178  Q
    |||||||||||| ||||||||||||||||||||| ||| ||| ||||||||||||| ||||    
T  25331101 agagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatctttta 25331041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 173
Target Start/End: Original strand, 24131208 - 24131263
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||| ||||||||||||||||||||| ||| ||| |||||||||||||    
T  24131208 agagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatc 24131263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 173
Target Start/End: Original strand, 32951072 - 32951127
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||| ||||||||||||||||||||| ||| ||| |||||||||||||    
T  32951072 agagtcttgattgaataccacaagactttttcattataaaaaagtcttttaaaatc 32951127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 173
Target Start/End: Original strand, 34228818 - 34228873
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||| ||||||||||||||||||||| ||| ||| |||||||||||||    
T  34228818 agagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatc 34228873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 5441372 - 5441319
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| ||||||||||||||||||||||||  ||| |||||||||||||    
T  5441372 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatc 5441319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 37828640 - 37828693
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| ||||||||||||||||||||||||  ||| |||||||||||||    
T  37828640 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatc 37828693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 37915753 - 37915700
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| ||||||||||||||||||||||||  ||| |||||||||||||    
T  37915753 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatc 37915700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 54341112 - 54341059
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| ||||||||||||||||||||||||  ||| |||||||||||||    
T  54341112 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatc 54341059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 173
Target Start/End: Complemental strand, 1044780 - 1044725
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||| ||||||||||||||||||||| ||| |||  ||||||||||||    
T  1044780 agagtcttgattgaataccacaagactttttcatgataaaaaaatcttttaaaatc 1044725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 173
Target Start/End: Complemental strand, 22201985 - 22201930
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||| |||| |||||||||||||||| ||| ||| |||||||||||||    
T  22201985 agagtcttgattgaatatcacaagactttttcatgataaaaaagtcttttaaaatc 22201930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 173
Target Start/End: Complemental strand, 23987226 - 23987171
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    ||||| |||||| ||||||||||||||||||||||||  ||| |||||||||||||    
T  23987226 agagtattgattgaataccacaagactttttcataattaaaaagtcttttaaaatc 23987171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 173
Target Start/End: Original strand, 25504875 - 25504930
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||| ||||||||||||||||||||| ||| ||| || ||||||||||    
T  25504875 agagtcttgattgaataccacaagactttttcatgataaaaaagtattttaaaatc 25504930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 173
Target Start/End: Complemental strand, 27768022 - 27767971
Alignment:
Q  122 tcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||| ||||||||||||||||||||||||  ||| |||||||||||||    
T  27768022 tcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatc 27767971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 173
Target Start/End: Original strand, 30009913 - 30009968
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||| ||||| | ||||||||||||||||| ||| |||||||||||||    
T  30009913 agagtcttgattgaatacaataagactttttcataataaaaatgtcttttaaaatc 30009968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 118 - 172
Target Start/End: Original strand, 7250009 - 7250063
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaat 172  Q
    |||||||||||| |||||||||||| |||||||| ||| ||| ||||||||||||    
T  7250009 agagtcttgattgaataccacaagattttttcatgataaaaaagtcttttaaaat 7250063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 118 - 172
Target Start/End: Original strand, 39479593 - 39479647
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaat 172  Q
    |||||||||||| |||||||||||||||||| || ||| ||| ||||||||||||    
T  39479593 agagtcttgattgaataccacaagacttttttatgataaaaaagtcttttaaaat 39479647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 118 - 172
Target Start/End: Complemental strand, 49469291 - 49469237
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaat 172  Q
    |||||||||||||||||||||||||||| |||| || | ||| ||||||||||||    
T  49469291 agagtcttgattaaataccacaagacttcttcacaaaaaaaaagtcttttaaaat 49469237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 28483951 - 28483898
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| |||||| |||||||||||||||||  ||| |||||||||||||    
T  28483951 agtcttgattgaatacctcaagactttttcataattaaaaagtcttttaaaatc 28483898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 29649905 - 29649958
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| |||||||||| |||||||||||||  ||| |||||||||||||    
T  29649905 agtcttgattgaataccacaaaactttttcataattaaaaagtcttttaaaatc 29649958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 30967537 - 30967590
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| ||||||||||||||||||||||||  |||  ||||||||||||    
T  30967537 agtcttgattgaataccacaagactttttcataattaaaaaatcttttaaaatc 30967590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 124 - 173
Target Start/End: Original strand, 49835055 - 49835104
Alignment:
Q  124 ttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||| ||||||||||||||||||||||||  ||| |||||||||||||    
T  49835055 ttgattgaataccacaagactttttcataattaaaaagtcttttaaaatc 49835104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 178
Target Start/End: Original strand, 19741144 - 19741203
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatcgttta 178  Q
    |||||||||||| |||||||||||| |||||||| ||| ||| ||||||||||||| ||||    
T  19741144 agagtcttgattgaataccacaagattttttcatgata-aaaagtcttttaaaatctttta 19741203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 173
Target Start/End: Original strand, 41881319 - 41881375
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataat-agaaaggtcttttaaaatc 173  Q
    |||||||||||| ||||||||||||||||||||| || | ||| |||||||||||||    
T  41881319 agagtcttgattgaataccacaagactttttcatgataaaaaaagtcttttaaaatc 41881375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 173
Target Start/End: Complemental strand, 42786738 - 42786682
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataat-agaaaggtcttttaaaatc 173  Q
    |||||||||||| ||||||||||||||||||||| || | ||| |||||||||||||    
T  42786738 agagtcttgattgaataccacaagactttttcatgataaaaaaagtcttttaaaatc 42786682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 173
Target Start/End: Original strand, 46635878 - 46635934
Alignment:
Q  118 agagtcttgattaaataccacaagac-tttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||| ||||||||||||| |||||||| ||| ||| |||||||||||||    
T  46635878 agagtcttgattgaataccacaagacttttttcatgataaaaaagtcttttaaaatc 46635934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 54853706 - 54853758
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaat 172  Q
    |||||||||| ||||||||||||||||||| ||||  ||| ||||||||||||    
T  54853706 agtcttgattgaataccacaagactttttcgtaattaaaaagtcttttaaaat 54853758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 173
Target Start/End: Complemental strand, 7007343 - 7007288
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||| |||||||||| |||||||||| ||| ||| |||| ||||||||    
T  7007343 agagtcttgattgaataccacaaaactttttcattataaaaaagtctattaaaatc 7007288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 173
Target Start/End: Complemental strand, 12913193 - 12913138
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||| |||||||||||||||||||| |||  |||  ||||||||||||    
T  12913193 agagtcttgattgaataccacaagactttttcaaaattaaaaaatcttttaaaatc 12913138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 173
Target Start/End: Original strand, 39307451 - 39307502
Alignment:
Q  122 tcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||| |||||||||| ||||||| |||||| ||| |||||||||||||    
T  39307451 tcttgattgaataccacaaaactttttgataatataaatgtcttttaaaatc 39307502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 173
Target Start/End: Original strand, 40537381 - 40537436
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||| ||| |||||||||||||||||| || ||| ||| |||||||||||||    
T  40537381 agagtcttaattgaataccacaagacttttttatgatacaaaagtcttttaaaatc 40537436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 172
Target Start/End: Complemental strand, 28370936 - 28370882
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaat 172  Q
    ||||| |||||| ||||||||||||||||||||||||  ||| ||| ||||||||    
T  28370936 agagttttgattgaataccacaagactttttcataattaaaaagtcctttaaaat 28370882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 172
Target Start/End: Original strand, 37046688 - 37046742
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaat 172  Q
    |||||||||||| |||||||||||||||||| || ||| |||  |||||||||||    
T  37046688 agagtcttgattgaataccacaagacttttttatgataaaaatatcttttaaaat 37046742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 178
Target Start/End: Complemental strand, 41762058 - 41762000
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatcgttta 178  Q
    |||||||||| |||||||||||||||||| |||||   || ||||||||||||| ||||    
T  41762058 agtcttgattcaataccacaagacttttttataatcacaaagtcttttaaaatccttta 41762000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 151
Target Start/End: Complemental strand, 23464925 - 23464892
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcat 151  Q
    |||||||||||| |||||||||||||||||||||    
T  23464925 agagtcttgattgaataccacaagactttttcat 23464892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 31314966 - 31315019
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| |||||||||| |||||||||| ||| |||  ||||||||||||    
T  31314966 agtcttgattgaataccacaatactttttcatgataaaaaaatcttttaaaatc 31315019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 38230851 - 38230798
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| |||||||| ||||||||||||  || ||| |||||||||||||    
T  38230851 agtcttgattgaataccactagactttttcattctaaaaaagtcttttaaaatc 38230798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 173
Target Start/End: Complemental strand, 1112863 - 1112807
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataat-agaaaggtcttttaaaatc 173  Q
    |||||||||||| |||| |||||||||||||||| || | ||| |||||||||||||    
T  1112863 agagtcttgattgaataacacaagactttttcatgataaaaaaagtcttttaaaatc 1112807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 171
Target Start/End: Original strand, 28100587 - 28100639
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataat-agaaaggtcttttaaaa 171  Q
    |||||||||| |||||||||||||||||| ||||| | ||| |||||||||||    
T  28100587 agtcttgattgaataccacaagacttttttataataaaaaaagtcttttaaaa 28100639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 170
Target Start/End: Complemental strand, 32322057 - 32322009
Alignment:
Q  122 tcttgattaaataccacaagactttttcataatagaaaggtcttttaaa 170  Q
    |||||||| |||||||||| |||||||||||||  ||| ||||||||||    
T  32322057 tcttgattgaataccacaaaactttttcataattaaaaagtcttttaaa 32322009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 154
Target Start/End: Original strand, 36479425 - 36479461
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataat 154  Q
    ||||| |||||| ||||||||||||||||||||||||    
T  36479425 agagttttgattgaataccacaagactttttcataat 36479461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 154
Target Start/End: Original strand, 44771048 - 44771084
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataat 154  Q
    |||||||||||| |||| |||||||||||||||||||    
T  44771048 agagtcttgattgaatatcacaagactttttcataat 44771084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 172
Target Start/End: Complemental strand, 51320889 - 51320837
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaat 172  Q
    |||||||||| |||||||||| | |||||||||||  ||| ||||||||||||    
T  51320889 agtcttgattgaataccacaaaattttttcataattaaaaagtcttttaaaat 51320837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 5e-16; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 118 - 173
Target Start/End: Complemental strand, 35337705 - 35337650
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||    
T  35337705 agagtcttgattgaataccacaagactttttcataataaaaaagtcttttaaaatc 35337650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 173
Target Start/End: Original strand, 996321 - 996376
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||| ||||||||||||||||||||| ||| ||| |||||||||||||    
T  996321 agagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatc 996376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 173
Target Start/End: Original strand, 3206432 - 3206487
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||| ||||||||||||||||||||| ||| ||| |||||||||||||    
T  3206432 agagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatc 3206487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 173
Target Start/End: Original strand, 12734076 - 12734131
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||| ||||||||||||||||||||| ||| ||| |||||||||||||    
T  12734076 agagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatc 12734131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 173
Target Start/End: Complemental strand, 19253797 - 19253742
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||| ||||||||||||||||||||| ||| ||| |||||||||||||    
T  19253797 agagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatc 19253742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 173
Target Start/End: Original strand, 37820713 - 37820768
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||| ||||||||||||||||||||| ||| ||| |||||||||||||    
T  37820713 agagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatc 37820768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 173
Target Start/End: Original strand, 44762273 - 44762328
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||| ||||||||||||||||||||| ||| ||| |||||||||||||    
T  44762273 agagtcttgattgaataccacaagactttttcattataaaaaagtcttttaaaatc 44762328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 118 - 172
Target Start/End: Original strand, 10728835 - 10728889
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaat 172  Q
    |||||||||||| ||||||||||||||||||||||||  ||| ||||||||||||    
T  10728835 agagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaat 10728889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 10660503 - 10660450
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| ||||||||||||||||||||||||  ||| |||||||||||||    
T  10660503 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatc 10660450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 11431494 - 11431441
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| ||||||||||||||||||||||||  ||| |||||||||||||    
T  11431494 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatc 11431441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 23753624 - 23753677
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| ||||||||||||||||||||||||  ||| |||||||||||||    
T  23753624 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatc 23753677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 27240481 - 27240534
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| ||||||||||||||||||||||||  ||| |||||||||||||    
T  27240481 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatc 27240534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 31646522 - 31646575
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| ||||||||||||||||||||||||  ||| |||||||||||||    
T  31646522 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatc 31646575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 36674368 - 36674421
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| ||||||||||||||||||||||||  ||| |||||||||||||    
T  36674368 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatc 36674421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 44906751 - 44906804
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| ||||||||||||||||||||||||  ||| |||||||||||||    
T  44906751 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatc 44906804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 120 - 172
Target Start/End: Complemental strand, 18749538 - 18749486
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaat 172  Q
    |||||||||| ||||||||||||||||||||||||  ||| ||||||||||||    
T  18749538 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaat 18749486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 173
Target Start/End: Original strand, 10139382 - 10139437
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||| ||||||||||||||||||||| ||| ||| || ||||||||||    
T  10139382 agagtcttgattgaataccacaagactttttcatgataaaaaagtattttaaaatc 10139437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 173
Target Start/End: Original strand, 15493967 - 15494022
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||||||||| |||||| |||||||||||  ||| |||||||||||||    
T  15493967 agagtcttgattaaatactacaagattttttcataattaaaaagtcttttaaaatc 15494022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 173
Target Start/End: Complemental strand, 20498179 - 20498125
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||| ||||||||||||||||||||| ||| ||| |||||||||||||    
T  20498179 agagtcttgattgaataccacaagactttttcatgata-aaaagtcttttaaaatc 20498125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 173
Target Start/End: Original strand, 29449096 - 29449151
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    ||||| |||||| |||||||||||| |||||||||||| ||| |||||||||||||    
T  29449096 agagtattgattgaataccacaagattttttcataataaaaaagtcttttaaaatc 29449151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 2024175 - 2024122
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| ||||||||||||||||||||||||| |||  | ||||||||||    
T  2024175 agtcttgattgaataccacaagactttttcataataaaaaaatattttaaaatc 2024122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 10105019 - 10105072
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| |||||||||||| ||||| |||||| ||| |||||||||||||    
T  10105019 agtcttgattgaataccacaagatttttttataataaaaaagtcttttaaaatc 10105072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 10216166 - 10216219
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| |||||||||||||||||| |||||| |||  ||||||||||||    
T  10216166 agtcttgattgaataccacaagacttttttataataaaaaaatcttttaaaatc 10216219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 10225795 - 10225848
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| |||| ||||||||||||| |||||| ||| |||||||||||||    
T  10225795 agtcttgattgaatagcacaagacttttttataataaaaaagtcttttaaaatc 10225848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 39842667 - 39842720
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| |||||||||| |||||||||||||  ||| |||||||||||||    
T  39842667 agtcttgattgaataccacaaaactttttcataattaaaaagtcttttaaaatc 39842720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 50762288 - 50762341
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| |||||||||| |||||||||||||  ||| |||||||||||||    
T  50762288 agtcttgattgaataccacaatactttttcataattaaaaagtcttttaaaatc 50762341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 54628811 - 54628758
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| ||||||||||||| ||||||||||  ||| |||||||||||||    
T  54628811 agtcttgattgaataccacaagacgttttcataattaaaaagtcttttaaaatc 54628758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 170
Target Start/End: Complemental strand, 17946296 - 17946248
Alignment:
Q  122 tcttgattaaataccacaagactttttcataatagaaaggtcttttaaa 170  Q
    |||||||| ||||||||||||||||||||||||  ||| ||||||||||    
T  17946296 tcttgattgaataccacaagactttttcataattaaaaagtcttttaaa 17946248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 173
Target Start/End: Complemental strand, 38772343 - 38772292
Alignment:
Q  122 tcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||| |||||||||||||||||||||||   ||| |||||||||||||    
T  38772343 tcttgattgaataccacaagactttttcataaataaaaagtcttttaaaatc 38772292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 173
Target Start/End: Complemental strand, 40246814 - 40246759
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||| ||||||||||||||||||||  ||| ||| || ||||||||||    
T  40246814 agagtcttgattgaataccacaagactttttcacgataaaaaagttttttaaaatc 40246759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 173
Target Start/End: Original strand, 52618205 - 52618256
Alignment:
Q  122 tcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||  ||||||||||||||||||||||||  ||| |||||||||||||    
T  52618205 tcttgatcgaataccacaagactttttcataattaaaaagtcttttaaaatc 52618256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 173
Target Start/End: Complemental strand, 52810390 - 52810335
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||| |||||||||| ||||||||||| |  ||| |||||||||||||    
T  52810390 agagtcttgattgaataccacaacactttttcatagttaaaaagtcttttaaaatc 52810335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 173
Target Start/End: Original strand, 6035293 - 6035343
Alignment:
Q  123 cttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    ||||||| |||||||||||| |||||||||||  ||| |||||||||||||    
T  6035293 cttgattgaataccacaagattttttcataattaaaaagtcttttaaaatc 6035343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 173
Target Start/End: Complemental strand, 29029975 - 29029921
Alignment:
Q  119 gagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    ||||||||||| |||||||||| | |||||||| ||| ||| |||||||||||||    
T  29029975 gagtcttgattgaataccacaatattttttcatgatataaaagtcttttaaaatc 29029921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 1440190 - 1440242
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| ||||||||||||||||||||| ||| ||| || ||||||||||    
T  1440190 agtcttgattgaataccacaagactttttcatgata-aaaagtattttaaaatc 1440242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 28146264 - 28146317
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| |||||| || ||||||||||| ||| ||| |||||||||||||    
T  28146264 agtcttgattgaataccccatgactttttcatcataaaaaagtcttttaaaatc 28146317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 46749330 - 46749277
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| | |||||||||||||||| |||||| |||  ||||||||||||    
T  46749330 agtcttgattcattaccacaagacttttttataataaaaaaatcttttaaaatc 46749277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 50903481 - 50903534
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| |||||||||||||||||||||| |  ||| || ||||||||||    
T  50903481 agtcttgattgaataccacaagactttttcatacttaaaaagtattttaaaatc 50903534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 10225674 - 10225726
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaat 172  Q
    |||||||||| |||||||||||||||||| |||||  ||| || |||||||||    
T  10225674 agtcttgattgaataccacaagacttttttataatcaaaaagttttttaaaat 10225726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 5e-16; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 118 - 173
Target Start/End: Complemental strand, 16269663 - 16269608
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||    
T  16269663 agagtcttgattgaataccacaagactttttcataataaaaaagtcttttaaaatc 16269608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 173
Target Start/End: Original strand, 14198814 - 14198869
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||| ||||||||||||||||||||| ||| ||| |||||||||||||    
T  14198814 agagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatc 14198869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 173
Target Start/End: Complemental strand, 24776327 - 24776272
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||| ||||||||||||||||||||| ||| ||| |||||||||||||    
T  24776327 agagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatc 24776272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 173
Target Start/End: Complemental strand, 32125222 - 32125167
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||| ||||||||||||||||||||| ||| ||| |||||||||||||    
T  32125222 agagtcttgattgaataccacaagactttttcattataaaaaagtcttttaaaatc 32125167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 215465 - 215518
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| ||||||||||||||||||||||||  ||| |||||||||||||    
T  215465 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatc 215518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 378949 - 378896
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| ||||||||||||||||||||||||  ||| |||||||||||||    
T  378949 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatc 378896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 26788754 - 26788701
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| ||||||||||||||||||||||||  ||| |||||||||||||    
T  26788754 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatc 26788701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 28844525 - 28844472
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| ||||||||||||||||||||||||  ||| |||||||||||||    
T  28844525 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatc 28844472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 118 - 178
Target Start/End: Original strand, 26601438 - 26601498
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatcgttta 178  Q
    ||||| |||||| |||||||||||||||||| |||||| ||| ||||||||||||| ||||    
T  26601438 agagttttgattgaataccacaagactttttaataataaaaaagtcttttaaaatccttta 26601498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 173
Target Start/End: Complemental strand, 12407348 - 12407297
Alignment:
Q  122 tcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||| ||||||||||||||||||||| ||| ||| |||||||||||||    
T  12407348 tcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatc 12407297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 173
Target Start/End: Complemental strand, 20605124 - 20605069
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||| ||||||||||||||||||||| ||  ||| |||||||||||||    
T  20605124 agagtcttgattgaataccacaagactttttcatgattaaaaagtcttttaaaatc 20605069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 173
Target Start/End: Original strand, 22552005 - 22552056
Alignment:
Q  122 tcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||| ||||||||||||||||||||| ||| ||| |||||||||||||    
T  22552005 tcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatc 22552056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 173
Target Start/End: Original strand, 31170862 - 31170917
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||| |||| |||||||||||||||| ||| ||| |||||||||||||    
T  31170862 agagtcttgattgaatatcacaagactttttcatgataaaaaagtcttttaaaatc 31170917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 173
Target Start/End: Complemental strand, 35317034 - 35316979
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||| ||||||||||||||||||||| ||| ||| || ||||||||||    
T  35317034 agagtcttgattgaataccacaagactttttcatgataaaaaagttttttaaaatc 35316979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 173
Target Start/End: Complemental strand, 43078643 - 43078592
Alignment:
Q  122 tcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||| ||||||||||||||||||||||||  ||| |||||||||||||    
T  43078643 tcttgattgaataccacaagactttttcataatcaaaaagtcttttaaaatc 43078592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 173
Target Start/End: Complemental strand, 44765747 - 44765692
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    ||||| |||||| ||||||||||||||||||||| ||| ||| |||||||||||||    
T  44765747 agagttttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatc 44765692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 118 - 174
Target Start/End: Original strand, 305704 - 305761
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataat-agaaaggtcttttaaaatcg 174  Q
    |||||||||||| ||||||||||||||||||||| || | ||| ||||||||||||||    
T  305704 agagtcttgattgaataccacaagactttttcatgataaaaaaagtcttttaaaatcg 305761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 3463641 - 3463588
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| |||||||||||| |||||||||||  ||| |||||||||||||    
T  3463641 agtcttgattgaataccacaagattttttcataattaaaaagtcttttaaaatc 3463588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 124 - 173
Target Start/End: Original strand, 28740527 - 28740576
Alignment:
Q  124 ttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||| ||||||||||||||||||||||||  ||| |||||||||||||    
T  28740527 ttgattgaataccacaagactttttcataattaaaaagtcttttaaaatc 28740576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 33135593 - 33135540
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| ||||||| ||||||||||||||||  ||| |||||||||||||    
T  33135593 agtcttgattgaataccataagactttttcataattaaaaagtcttttaaaatc 33135540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 172
Target Start/End: Complemental strand, 3574817 - 3574765
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaat 172  Q
    |||||||||| |||||||||| |||||||||||||  ||| ||||||||||||    
T  3574817 agtcttgattgaataccacaaaactttttcataattaaaaagtcttttaaaat 3574765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 173
Target Start/End: Complemental strand, 9120140 - 9120085
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||| ||||||||| || |||||||| ||| ||| |||||||||||||    
T  9120140 agagtcttgattgaataccacatgattttttcatgataaaaaagtcttttaaaatc 9120085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 7026574 - 7026520
Alignment:
Q  120 agtcttgattaaataccacaagact-ttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| |||||||||||||| ||||||||||  ||| |||||||||||||    
T  7026574 agtcttgattgaataccacaagacttttttcataattaaaaagtcttttaaaatc 7026520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 147
Target Start/End: Complemental strand, 8172192 - 8172163
Alignment:
Q  118 agagtcttgattaaataccacaagactttt 147  Q
    ||||||||||||||||||||||||||||||    
T  8172192 agagtcttgattaaataccacaagactttt 8172163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 13833662 - 13833715
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| |||||||||| |||||||||||||  |||  ||||||||||||    
T  13833662 agtcttgattgaataccacaatactttttcataattaaaatatcttttaaaatc 13833715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 39855 - 39908
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| ||||||||||||||||||||||||  |||||||||||||||||    
T  39855 agtcttgattgaataccacaagactttttcataattaaaaggtcttttaaaatc 39908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 22183334 - 22183274
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatcgttta 178  Q
    |||||||||||| ||||||||||||||||||||| ||| ||| ||||||||||||| ||||    
T  22183334 agagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatccttta 22183274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 173
Target Start/End: Complemental strand, 953783 - 953728
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||| ||||||||||||||||||||| ||| ||| |||||||||||||    
T  953783 agagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatc 953728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 173
Target Start/End: Original strand, 28824608 - 28824663
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||| ||||||||||||||||||||| ||| ||| |||||||||||||    
T  28824608 agagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatc 28824663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 173
Target Start/End: Complemental strand, 35279636 - 35279581
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||| ||||||||||||||||||||| ||| ||| |||||||||||||    
T  35279636 agagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatc 35279581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 118 - 172
Target Start/End: Original strand, 49198503 - 49198557
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaat 172  Q
    |||||||||||| ||||||||||||||||||||| ||| ||| ||||||||||||    
T  49198503 agagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaat 49198557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 122 - 172
Target Start/End: Original strand, 50192791 - 50192841
Alignment:
Q  122 tcttgattaaataccacaagactttttcataatagaaaggtcttttaaaat 172  Q
    |||||||| ||||||||||||||||||||||||| ||| ||||||||||||    
T  50192791 tcttgattgaataccacaagactttttcataataaaaaagtcttttaaaat 50192841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 6312536 - 6312483
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| ||||||||||||||||||||||||  ||| |||||||||||||    
T  6312536 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatc 6312483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 8141366 - 8141419
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| ||||||||||||||||||||||||  ||| |||||||||||||    
T  8141366 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatc 8141419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 9322738 - 9322791
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| ||||||||||||||||||||||||  ||| |||||||||||||    
T  9322738 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatc 9322791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 15835291 - 15835344
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| ||||||||||||||||||||||||  ||| |||||||||||||    
T  15835291 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatc 15835344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 120 - 172
Target Start/End: Complemental strand, 29219250 - 29219198
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaat 172  Q
    |||||||||| ||||||||||||||||||||||||  ||| ||||||||||||    
T  29219250 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaat 29219198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 29396626 - 29396678
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaat 172  Q
    |||||||||| ||||||||||||||||||||||||  ||| ||||||||||||    
T  29396626 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaat 29396678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 173
Target Start/End: Original strand, 19452086 - 19452141
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||| ||||||||||||||||||||  ||| ||| |||||||||||||    
T  19452086 agagtcttgattgaataccacaagactttttcaagataaaaaagtcttttaaaatc 19452141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 173
Target Start/End: Complemental strand, 21222112 - 21222057
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||| ||||||||||||||||||||| ||| ||| | |||||||||||    
T  21222112 agagtcttgattgaataccacaagactttttcatgataaaaaagccttttaaaatc 21222057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 173
Target Start/End: Original strand, 35679364 - 35679419
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||| ||||||| ||||||||||||||||||||| ||| ||| |||||||||||||    
T  35679364 agagccttgattgaataccacaagactttttcattataaaaaagtcttttaaaatc 35679419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 120 - 178
Target Start/End: Original strand, 6304492 - 6304550
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatcgttta 178  Q
    |||||||||| ||||||||||||||||||||| | | ||| ||||||||||||| ||||    
T  6304492 agtcttgattgaataccacaagactttttcatgaaaaaaaagtcttttaaaatccttta 6304550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 118 - 172
Target Start/End: Complemental strand, 47780583 - 47780529
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaat 172  Q
    |||||||||||| ||||||||||||||||||||| ||| |||  |||||||||||    
T  47780583 agagtcttgattgaataccacaagactttttcatgataaaaaaatcttttaaaat 47780529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 18798453 - 18798400
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| ||||||||||||| ||||||||||  ||| |||||||||||||    
T  18798453 agtcttgattgaataccacaagacattttcataattaaaaagtcttttaaaatc 18798400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 19007584 - 19007637
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| |||||||| |||||||||||| ||| ||| |||||||||||||    
T  19007584 agtcttgattgaataccactagactttttcattataaaaaagtcttttaaaatc 19007637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 25612119 - 25612066
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| |||||||||||| |||||||||||  ||| |||||||||||||    
T  25612119 agtcttgattgaataccacaagattttttcataattaaaaagtcttttaaaatc 25612066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 28387631 - 28387684
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| ||||||| ||||||||||||||||  ||| |||||||||||||    
T  28387631 agtcttgattgaataccataagactttttcataattaaaaagtcttttaaaatc 28387684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 42657793 - 42657740
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| |||||||||||||||||| |||||  ||| |||||||||||||    
T  42657793 agtcttgattgaataccacaagacttttttataattaaaaagtcttttaaaatc 42657740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 49230848 - 49230795
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| ||||||||| ||||||||||||||  ||| |||||||||||||    
T  49230848 agtcttgattgaataccacatgactttttcataattaaaaagtcttttaaaatc 49230795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 173
Target Start/End: Complemental strand, 730112 - 730058
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||| ||||||||||||||||||||| | | ||| |||||||||||||    
T  730112 agagtcttgattgaataccacaagactttttcatga-aaaaaagtcttttaaaatc 730058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 169
Target Start/End: Complemental strand, 14494173 - 14494122
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaa 169  Q
    |||||||||||| |||||||||||| |||||||| ||| ||| |||||||||    
T  14494173 agagtcttgattgaataccacaagattttttcatgataaaaaagtcttttaa 14494122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 173
Target Start/End: Original strand, 38536283 - 38536338
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||| |||||||||||||||||| ||||   ||| |||||||||||||    
T  38536283 agagtcttgattgaataccacaagacttttttataaataaaaagtcttttaaaatc 38536338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 173
Target Start/End: Original strand, 38558501 - 38558556
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||| |||||||||||||||||| ||||   ||| |||||||||||||    
T  38558501 agagtcttgattgaataccacaagacttttttataaataaaaagtcttttaaaatc 38558556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 173
Target Start/End: Original strand, 45760246 - 45760301
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    ||||| |||||| ||||||||||||||||||||| ||| |||  ||||||||||||    
T  45760246 agagttttgattgaataccacaagactttttcatgataaaaaaatcttttaaaatc 45760301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 173
Target Start/End: Complemental strand, 49418048 - 49417993
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||| |||| |||| ||||||||||| ||| ||| |||||||||||||    
T  49418048 agagtcttgattgaatatcacatgactttttcatgataaaaaagtcttttaaaatc 49417993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 148
Target Start/End: Original strand, 19451960 - 19451990
Alignment:
Q  118 agagtcttgattaaataccacaagacttttt 148  Q
    |||||||||||||||||||||||||||||||    
T  19451960 agagtcttgattaaataccacaagacttttt 19451990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 154
Target Start/End: Original strand, 48177700 - 48177734
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataat 154  Q
    |||||||||| ||||||||||||||||||||||||    
T  48177700 agtcttgattgaataccacaagactttttcataat 48177734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 5495334 - 5495387
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| ||||||||| ||||||||||||||  ||| || ||||||||||    
T  5495334 agtcttgattgaataccacatgactttttcataattaaaaagttttttaaaatc 5495387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 9577670 - 9577723
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| |||||||||| |||||||||| ||  ||| |||||||||||||    
T  9577670 agtcttgattgaataccacaaaactttttcatcattaaaaagtcttttaaaatc 9577723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 148
Target Start/End: Complemental strand, 29219297 - 29219264
Alignment:
Q  115 gacagagtcttgattaaataccacaagacttttt 148  Q
    ||||||||||||||| ||||||||||||||||||    
T  29219297 gacagagtcttgattgaataccacaagacttttt 29219264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 173
Target Start/End: Complemental strand, 42290802 - 42290753
Alignment:
Q  124 ttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||| ||||||||||||||||||||||||  |||  ||||||||||||    
T  42290802 ttgattgaataccacaagactttttcataattaaaaaatcttttaaaatc 42290753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 173
Target Start/End: Complemental strand, 46328000 - 46327951
Alignment:
Q  124 ttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||| |||| |||||||||||||||||||  ||| |||||||||||||    
T  46328000 ttgattgaataacacaagactttttcataattaaaaagtcttttaaaatc 46327951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 48194669 - 48194616
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| |||||||| ||||||||||||  || ||| |||||||||||||    
T  48194669 agtcttgattgaataccactagactttttcattctaaaaaagtcttttaaaatc 48194616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 48203427 - 48203374
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| |||||||| ||||||||||||  || ||| |||||||||||||    
T  48203427 agtcttgattgaataccactagactttttcattctaaaaaagtcttttaaaatc 48203374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 173
Target Start/End: Original strand, 47654589 - 47654645
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataat-agaaaggtcttttaaaatc 173  Q
    |||||||||||  ||||||||||||||||||||| || | ||| |||||||||||||    
T  47654589 agagtcttgatcgaataccacaagactttttcatgataaaaaaagtcttttaaaatc 47654645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 173
Target Start/End: Complemental strand, 13895 - 13840
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||| ||||||||||||||||||||||||  ||| |||||||||||||    
T  13895 agagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatc 13840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 173
Target Start/End: Original strand, 21432 - 21487
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||| ||||||||||||||||||||||||  ||| |||||||||||||    
T  21432 agagtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatc 21487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 173
Target Start/End: Original strand, 7507134 - 7507189
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||| ||||||||||||||||||||| ||| ||| |||||||||||||    
T  7507134 agagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatc 7507189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 173
Target Start/End: Original strand, 23115403 - 23115458
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||| ||||||||||||||||||||| ||| ||| |||||||||||||    
T  23115403 agagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatc 23115458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 173
Target Start/End: Complemental strand, 26373776 - 26373721
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||| ||||||||||||||||||||| ||| ||| |||||||||||||    
T  26373776 agagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatc 26373721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 173
Target Start/End: Complemental strand, 41479068 - 41479013
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||| ||||||||||||||||||||| ||| ||| |||||||||||||    
T  41479068 agagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatc 41479013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 173
Target Start/End: Original strand, 42735512 - 42735567
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||| ||||||||||||||||||||| ||| ||| |||||||||||||    
T  42735512 agagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatc 42735567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 2705054 - 2705115
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatcgtttac 179  Q
    |||||||||||| ||||||||||||||||||||| ||| |||  |||||||||||| |||||    
T  2705054 agagtcttgattgaataccacaagactttttcatgataaaaaaatcttttaaaatcctttac 2705115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 14782372 - 14782425
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| ||||||||||||||||||||||||  ||| |||||||||||||    
T  14782372 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatc 14782425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 39467704 - 39467757
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| ||||||||||||||||||||||||  ||| |||||||||||||    
T  39467704 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatc 39467757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 44726047 - 44726100
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| ||||||||||||||||||||||||  ||| |||||||||||||    
T  44726047 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatc 44726100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 118 - 178
Target Start/End: Original strand, 24214826 - 24214886
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatcgttta 178  Q
    |||||||||||| |||||||||||||||||| || ||| ||| ||||||||||||| ||||    
T  24214826 agagtcttgattgaataccacaagacttttttatgataaaaaagtcttttaaaatccttta 24214886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 173
Target Start/End: Original strand, 26374663 - 26374718
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||| |||| |||||||||||||||| ||| ||| |||||||||||||    
T  26374663 agagtcttgattgaatatcacaagactttttcatgataaaaaagtcttttaaaatc 26374718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 173
Target Start/End: Original strand, 42938352 - 42938407
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||| |||||||||||||||||||||  || ||| |||||||||||||    
T  42938352 agagtcttgattgaataccacaagactttttcatggtaaaaaagtcttttaaaatc 42938407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 4031495 - 4031548
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||  ||||||||||||||||||||||||  ||| |||||||||||||    
T  4031495 agtcttgatcgaataccacaagactttttcataattaaaaagtcttttaaaatc 4031548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 7466304 - 7466251
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| ||||||||||||||||||||||||  |||  ||||||||||||    
T  7466304 agtcttgattgaataccacaagactttttcataattaaaaaatcttttaaaatc 7466251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 10295618 - 10295671
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| ||||||||||||||||||||||||  |||  ||||||||||||    
T  10295618 agtcttgattgaataccacaagactttttcataattaaaaactcttttaaaatc 10295671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 16362165 - 16362112
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| |||||||||| |||||||||||||  ||| |||||||||||||    
T  16362165 agtcttgattgaataccacaaaactttttcataattaaaaagtcttttaaaatc 16362112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 18958964 - 18959017
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| ||||| ||||||||||||||||||  ||| |||||||||||||    
T  18958964 agtcttgattgaatactacaagactttttcataattaaaaagtcttttaaaatc 18959017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 19718118 - 19718171
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| |||||| || ||||||||||||||  |||||||||||||||||    
T  19718118 agtcttgattgaataccgcaggactttttcataattaaaaggtcttttaaaatc 19718171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 32497452 - 32497399
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| ||||||||||||||||||||| ||  ||| |||||||||||||    
T  32497452 agtcttgattgaataccacaagactttttcatgattaaaaagtcttttaaaatc 32497399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 124 - 173
Target Start/End: Complemental strand, 42937325 - 42937276
Alignment:
Q  124 ttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||| ||||||||||||||||||||| ||| ||| |||||||||||||    
T  42937325 ttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatc 42937276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 43959629 - 43959568
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataat-agaaaggtcttttaaaatcgttta 178  Q
    |||||||||||| ||||||||||||||||||||| || | ||| ||||||||||||| ||||    
T  43959629 agagtcttgattgaataccacaagactttttcatgataaaaaaagtcttttaaaatccttta 43959568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 178
Target Start/End: Original strand, 24502010 - 24502066
Alignment:
Q  122 tcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatcgttta 178  Q
    |||||||| |||| |||||||||||||||| ||| ||| ||||||||||||| ||||    
T  24502010 tcttgattgaataacacaagactttttcatgataaaaaagtcttttaaaatccttta 24502066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 170
Target Start/End: Original strand, 32711517 - 32711569
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaa 170  Q
    |||||||||||| |||||||||| |||||||||| ||| ||| ||||||||||    
T  32711517 agagtcttgattgaataccacaaaactttttcatgataaaaaagtcttttaaa 32711569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 173
Target Start/End: Original strand, 42306024 - 42306075
Alignment:
Q  122 tcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||| |||| |||||||||||||||||||  ||| |||||||||||||    
T  42306024 tcttgattgaatatcacaagactttttcataattaaaaagtcttttaaaatc 42306075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 154
Target Start/End: Original strand, 18306198 - 18306232
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataat 154  Q
    |||||||||| ||||||||||||||||||||||||    
T  18306198 agtcttgattgaataccacaagactttttcataat 18306232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 43166885 - 43166938
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| ||||||||||||||||||| ||||  ||| || ||||||||||    
T  43166885 agtcttgattgaataccacaagactttttcttaattaaaaagtattttaaaatc 43166938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 172
Target Start/End: Complemental strand, 31623664 - 31623612
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaat 172  Q
    |||||||||| ||| ||||||||||||||||||||  |||  |||||||||||    
T  31623664 agtcttgattgaatgccacaagactttttcataattaaaaaatcttttaaaat 31623612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 43308520 - 43308568
Alignment:
Q  124 ttgattaaataccacaagactttttcataatagaaaggtcttttaaaat 172  Q
    |||||| ||||||| ||||||||||||||||  ||| ||||||||||||    
T  43308520 ttgattgaataccagaagactttttcataattaaaaagtcttttaaaat 43308568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 173
Target Start/End: Original strand, 2300973 - 2301028
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||| ||||||||||||||||||||| ||| ||| |||||||||||||    
T  2300973 agagtcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatc 2301028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 31895664 - 31895611
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| ||||||||||||||||||||||||  ||| |||||||||||||    
T  31895664 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatc 31895611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 34773377 - 34773324
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| ||||||||||||||||||||||||  ||| |||||||||||||    
T  34773377 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatc 34773324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 1391594 - 1391534
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatcgttta 178  Q
    |||||||||||| ||||||||||||||||||||| ||| ||| ||| ||||||||| ||||    
T  1391594 agagtcttgattgaataccacaagactttttcatgataaaaaagtcatttaaaatccttta 1391534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 173
Target Start/End: Complemental strand, 7051815 - 7051760
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||| |||| |||||||||||||||| ||| ||| |||||||||||||    
T  7051815 agagtcttgattgaatatcacaagactttttcatgataaaaaagtcttttaaaatc 7051760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 173
Target Start/End: Original strand, 6197713 - 6197768
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||| ||||||||| ||||||||||| ||| ||| || ||||||||||    
T  6197713 agagtcttgattgaataccacacgactttttcatgataaaaaagttttttaaaatc 6197768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 173
Target Start/End: Original strand, 14262672 - 14262723
Alignment:
Q  122 tcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||| |||||||||||| |||||||||||  ||| |||||||||||||    
T  14262672 tcttgattgaataccacaagattttttcataattaaaaagtcttttaaaatc 14262723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 172
Target Start/End: Complemental strand, 28002635 - 28002581
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaat 172  Q
    |||||||||||| ||||| |||||| |||||||| ||| ||| ||||||||||||    
T  28002635 agagtcttgattgaatacgacaagattttttcattataaaaaagtcttttaaaat 28002581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 5957205 - 5957152
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| |||||||| ||||||||| || ||| ||| |||||||||||||    
T  5957205 agtcttgattgaataccactagacttttttattataaaaaagtcttttaaaatc 5957152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 7100243 - 7100190
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| |||||||| ||||||||||||  || ||| |||||||||||||    
T  7100243 agtcttgattgaataccactagactttttcattctaaaaaagtcttttaaaatc 7100190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 8636699 - 8636752
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||  ||||||||  ||||||||||| ||||||| |||||||||||||    
T  8636699 agtcttgatcgaataccacgtgactttttcatcatagaaaagtcttttaaaatc 8636752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 8794387 - 8794440
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| |||||||| ||||||||||||  || ||| |||||||||||||    
T  8794387 agtcttgattgaataccactagactttttcattctaaaaaagtcttttaaaatc 8794440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 31609697 - 31609750
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| |||||||||||| ||||| |||||  ||| |||||||||||||    
T  31609697 agtcttgattgaataccacaagatttttttataattaaaaagtcttttaaaatc 31609750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 173
Target Start/End: Original strand, 11007688 - 11007740
Alignment:
Q  121 gtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    ||||| |||||||||||||||||||||| ||| |  ||| |||||||||||||    
T  11007688 gtcttaattaaataccacaagacttttttatatttaaaaagtcttttaaaatc 11007740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 173
Target Start/End: Complemental strand, 29076568 - 29076512
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataat-agaaaggtcttttaaaatc 173  Q
    |||||||||||| |||| |||||||||||||||| || | ||| |||||||||||||    
T  29076568 agagtcttgattgaatatcacaagactttttcatgataaaaaaagtcttttaaaatc 29076512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 173
Target Start/End: Complemental strand, 29111541 - 29111485
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataat-agaaaggtcttttaaaatc 173  Q
    |||||||||||| |||| |||||||||||||||| || | ||| |||||||||||||    
T  29111541 agagtcttgattgaatatcacaagactttttcatgataaaaaaagtcttttaaaatc 29111485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 10529 - 10476
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| ||||||||||||||||||||||||  ||| |||||||||||||    
T  10529 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatc 10476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 14864 - 14811
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| ||||||||||||||||||||||||  ||| |||||||||||||    
T  14864 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatc 14811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 58272 - 58325
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| ||||||||||||||||||||||||  ||| |||||||||||||    
T  58272 agtcttgattgaataccacaagactttttcataattaaaaagtcttttaaaatc 58325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 173
Target Start/End: Original strand, 38756 - 38811
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||| ||||||||||||||||||||| ||| |||  ||||||||||||    
T  38756 agagtcttgattgaataccacaagactttttcatgataaaaatatcttttaaaatc 38811  T

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Target: scaffold0113 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 173
Target Start/End: Original strand, 39093 - 39144
Alignment:
Q  122 tcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||| ||||||||||||||||||||| ||| ||| |||||||||||||    
T  39093 tcttgattgaataccacaagactttttcatgataaaaaagtcttttaaaatc 39144  T

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Target: scaffold0054 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 173
Target Start/End: Original strand, 37059 - 37114
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||||| |||| |||||||||||||||||||  ||| |||||||||||||    
T  37059 agagtcttgattgaatagcacaagactttttcataattaaaaagtcttttaaaatc 37114  T

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Target: scaffold1504 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 832 - 779
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| |||||||||||| |||||||||||  ||| |||||||||||||    
T  832 agtcttgattgaataccacaagaatttttcataattaaaaagtcttttaaaatc 779  T

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Target: scaffold0922 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0922
Description:

Target: scaffold0922; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 4169 - 4116
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| |||||||||||||||||||| |||  ||| |||||||||||||    
T  4169 agtcttgattgaataccacaagactttttcaaaattaaaaagtcttttaaaatc 4116  T

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Target: scaffold0287 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 11793 - 11846
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| |||| ||||||||||||| |||||| ||| |||||||||||||    
T  11793 agtcttgattgaatatcacaagacttttttataataaaaaagtcttttaaaatc 11846  T

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Target: scaffold0400 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 169
Target Start/End: Original strand, 15269 - 15320
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaa 169  Q
    |||||||||||| |||||||||||| |||||||| ||| ||| |||||||||    
T  15269 agagtcttgattgaataccacaagattttttcatgataaaaaagtcttttaa 15320  T

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Target: scaffold0365 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 169
Target Start/End: Original strand, 15912 - 15963
Alignment:
Q  118 agagtcttgattaaataccacaagactttttcataatagaaaggtcttttaa 169  Q
    |||||||||||| |||||||||||| |||||||| ||| ||| |||||||||    
T  15912 agagtcttgattgaataccacaagattttttcatgataaaaaagtcttttaa 15963  T

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Target: scaffold0651 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 173
Target Start/End: Complemental strand, 8731 - 8678
Alignment:
Q  120 agtcttgattaaataccacaagactttttcataatagaaaggtcttttaaaatc 173  Q
    |||||||||| |||||||||| |||||||||| ||| |||  ||||||||||||    
T  8731 agtcttgattgaataccacaatactttttcatgataaaaaaatcttttaaaatc 8678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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