View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15456_high_45 (Length: 274)
Name: NF15456_high_45
Description: NF15456
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15456_high_45 |
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Alignment Details
Target: chr3 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 7 - 257
Target Start/End: Original strand, 52696973 - 52697226
Alignment:
| Q |
7 |
tccaagaatataaaaaagtttgattcagaaagaaaaaatgtataatgctactttaaactactagcagtatttcacaaactttacaaatgggttatcacaa |
106 |
Q |
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| T |
52696973 |
tccaaaaatataaaaaagtttgattcagaaagaaaaaatgta--atgctactttaaactactagcagtatttcacaaactttacaaatgggttatcacaa |
52697070 |
T |
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| Q |
107 |
gtaggaatatcaagtcaagatagagcttt-----gagtcgaacgcagagtcctagttgaaacaaacactctaaaggatcagagtcgtatacacgtaagta |
201 |
Q |
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| T |
52697071 |
gtaggaatatcaagtcaagatagagctttaatttgagtcgaacgcagaatcctagttgaaacaaacactctataggatcagagtcgtatacacgtaagta |
52697170 |
T |
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| Q |
202 |
ttcgtcttcccatgtatttgatacctctcattcttcgtttatttgaacattaaaat |
257 |
Q |
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||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
52697171 |
ttcgtcttcccatgtatttgatacctctcattctttgtttatttgaacattaaaat |
52697226 |
T |
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