View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15456_high_62 (Length: 244)
Name: NF15456_high_62
Description: NF15456
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15456_high_62 |
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Alignment Details
Target: chr2 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 5591759 - 5591523
Alignment:
| Q |
1 |
ttgtaaactggaataaatgtaacaagtttaattggttataccaccttaagcttgatttgatttgtgttaaataaattattcgataactatatataagtgt |
100 |
Q |
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| T |
5591759 |
ttgtaaactggaataaatgtaacaagtttaattggttataccaccttaagcttgatttgatttgtgttaaataaattattcgataactatatataagtgt |
5591660 |
T |
|
| Q |
101 |
gtatctgatgatattatcccatatatttgtacagtaaataatctacatgaagtgtgataaggacgaaggtaattatttgattaggaactgaatgattaac |
200 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5591659 |
gtatctgatgatattatcccatatatttatacagtaaataatctacattaagtgtgataaggacgaaggtaattatttgattaggaactgaatgattaac |
5591560 |
T |
|
| Q |
201 |
taatgattgggtttcattaatttcaagcatctgtctg |
237 |
Q |
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||||||||||||||||||||||||||||||||||||| |
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| T |
5591559 |
taatgattgggtttcattaatttcaagcatctgtctg |
5591523 |
T |
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