View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15456_high_65 (Length: 237)
Name: NF15456_high_65
Description: NF15456
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15456_high_65 |
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Alignment Details
Target: chr2 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 5300760 - 5300980
Alignment:
| Q |
1 |
tgattaggaataacaactacatctgtctcagttgcaactggatcaggaacaactaccactggcatggagttcatgtcgagttctagtgacttgggctgaa |
100 |
Q |
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|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
5300760 |
tgattaggaataacaactacatctgtctcagttgcaactggatcaggaacaactaccactggcatggagttcatgtcgacttctagtgacttgggctgaa |
5300859 |
T |
|
| Q |
101 |
cttcggcaccaacatcatttgtaatctcctcccaaaatgtcattgatgagtcgagcagatccaattgttccaagtttaatgatagacgagacacactcgg |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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|
| T |
5300860 |
cttcggcaccaacatcatttgtaatctcctcccaaaatgtcattgatgagtcgagcagatccaattgttccaagtttaatgatagacgagacacacccgg |
5300959 |
T |
|
| Q |
201 |
gtcgttttccttgtgtattac |
221 |
Q |
| |
|
||||||||| ||||||||||| |
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|
| T |
5300960 |
gtcgttttctttgtgtattac |
5300980 |
T |
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