View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15456_low_34 (Length: 323)
Name: NF15456_low_34
Description: NF15456
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15456_low_34 |
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Alignment Details
Target: chr2 (Bit Score: 272; Significance: 1e-152; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 1 - 304
Target Start/End: Original strand, 44150429 - 44150731
Alignment:
| Q |
1 |
ttattttactaaggagaatgagaaaatatagatcgacctttcacatgcattgacaaaacaatttagttaatgatattctattattattctatatatgaat |
100 |
Q |
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| T |
44150429 |
ttattttactaaggagaaagagaaaatatagatcgacctttcacatgcattgacaaaacaatttagttaatgatattctattattattctatatatgaat |
44150528 |
T |
|
| Q |
101 |
acaaaataaattttgaaacgtgtgtggaaaacaagttgtgccctttcacaacaagaattaatgaagagtttttctttcacaacacggggccagagctagc |
200 |
Q |
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| T |
44150529 |
acaaaataaattttgaaacgtgtgtggaaaacaagttgtgccctttaacaacaagaattaatgaagagtttttctttcacaacacggggccatagctagc |
44150628 |
T |
|
| Q |
201 |
tagctagacttttaacaaaggaagtaactgcaagatgtcttttatagctttttggcaagacaaggtaccattgatcttgttctctctccacaccatgtct |
300 |
Q |
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|||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| |
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| T |
44150629 |
tagctagacttttaacgatggaagtaactgcaagatgtcttttatagctttttggcaagacaaggtaccattgatcatgttctctctcca-accatgtct |
44150727 |
T |
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| Q |
301 |
atgg |
304 |
Q |
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|||| |
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| T |
44150728 |
atgg |
44150731 |
T |
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