View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15456_low_49 (Length: 272)
Name: NF15456_low_49
Description: NF15456
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15456_low_49 |
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Alignment Details
Target: chr6 (Bit Score: 178; Significance: 4e-96; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 26 - 251
Target Start/End: Original strand, 7623167 - 7623392
Alignment:
| Q |
26 |
actcgttagaaagactcatctgataactatcgcatctaactaagatttcatcatacatataaactacatataagttgcaaagtcaaggagcattaagatc |
125 |
Q |
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||||||||| || ||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
7623167 |
actcgttagcaaaacttttctgataactatcgcatcaaactaagatttcatcatacatataaactacatgtaagttgcaaagtcaaggagcattaagatc |
7623266 |
T |
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| Q |
126 |
ataaactacaccaaaactcttttataaacatcaaattgagaataaacttagtactattgtattatgcaaacacacaatcggtttgcaacaccaacagaca |
225 |
Q |
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||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||| |
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| T |
7623267 |
ataaactacaccaaaactcatttataaacaccaaattgagaataaacttagtactattgtattatgcaaacacacaatcggctcgcaacaccatcagaca |
7623366 |
T |
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| Q |
226 |
attgtcgtgaacctagaataccatgt |
251 |
Q |
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|||||| ||||||||||||||||||| |
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| T |
7623367 |
attgtcatgaacctagaataccatgt |
7623392 |
T |
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