View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15456_low_51 (Length: 268)
Name: NF15456_low_51
Description: NF15456
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15456_low_51 |
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Alignment Details
Target: chr5 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 1 - 249
Target Start/End: Complemental strand, 10219946 - 10219698
Alignment:
| Q |
1 |
agtaatgaatgataccatgtaatatttataagtagcagcagggtaattccgaatataaaagcgatgaacatcagtaggaggaaacaaaagaaagtgtttt |
100 |
Q |
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| T |
10219946 |
agtaatgaatcataccatgtaatatttataagtagcagcagggtaattccgaatataaaagcgatgaacatcagtaggaggaaacaaaagaaagtgtttt |
10219847 |
T |
|
| Q |
101 |
tgaccagtaacaacagcataaagattctcataatgatccttatgaaaccaagtagatgaatgtttgttcccaatccaaagattaacagcttcaggctcta |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
10219846 |
tgaccagtaacaacagcataaagattctcataatgatccttatgaaaccaagtagatgaatgtttgtttccaatccaaagattaacagcttcaggctcta |
10219747 |
T |
|
| Q |
201 |
aaccaaatgcttcagtagcccaagcaatatgttgatcacaatctttaac |
249 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10219746 |
aaccaaatgcttcagtagcccaagcaatatgttgatcacaatctttaac |
10219698 |
T |
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