View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15456_low_54 (Length: 263)
Name: NF15456_low_54
Description: NF15456
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15456_low_54 |
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Alignment Details
Target: chr7 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 17 - 251
Target Start/End: Complemental strand, 19395755 - 19395522
Alignment:
| Q |
17 |
ataaaccattgagttgatccgatgaaagacatctca--gaaattttggaagcaagaaaaccaagtaaaatggagatttgaagtccaaacaacttgagaaa |
114 |
Q |
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| T |
19395755 |
ataaaccattgagttgatccgatgaaagacatctcatagaaattttggaagcaagaaaaccaagtaaaatggagatttgaagtccaaacaacttgagaaa |
19395656 |
T |
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| Q |
115 |
ttttgtcacaaatcccaagcacatgccaaaagataaaataccatgaagagtgagaaatcgagagaaaacttggagagttttttcagaagatgttatgatt |
214 |
Q |
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| T |
19395655 |
ttttgtcacaaatcccaagcacatgccaaaagataaaataccatgaagagtgagaaatcgagagaaaact---agagttttttcataagatgttatgatt |
19395559 |
T |
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| Q |
215 |
agattatactttagtcttaagttttaatcatgatatt |
251 |
Q |
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| T |
19395558 |
agattatactttagtcttaagttttaatcatgatatt |
19395522 |
T |
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