View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15456_low_59 (Length: 251)

Name: NF15456_low_59
Description: NF15456
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15456_low_59
NF15456_low_59
[»] chr1 (5 HSPs)
chr1 (130-236)||(31867218-31867324)
chr1 (31-129)||(31867087-31867185)
chr1 (33-122)||(44352416-44352505)
chr1 (160-236)||(44352267-44352343)
chr1 (1-30)||(31867186-31867215)
[»] chr5 (8 HSPs)
chr5 (130-236)||(4306915-4307021)
chr5 (31-129)||(4307054-4307152)
chr5 (130-236)||(15917195-15917301)
chr5 (33-129)||(2985481-2985577)
chr5 (184-236)||(15497726-15497778)
chr5 (153-236)||(14316914-14316997)
chr5 (43-113)||(15497782-15497853)
chr5 (1-31)||(4307023-4307053)
[»] chr3 (12 HSPs)
chr3 (130-236)||(6891239-6891345)
chr3 (31-129)||(19269519-19269617)
chr3 (130-236)||(19269380-19269486)
chr3 (31-129)||(48757712-48757810)
chr3 (130-236)||(21434164-21434270)
chr3 (130-236)||(48757573-48757679)
chr3 (43-129)||(6891120-6891206)
chr3 (130-236)||(51818068-51818173)
chr3 (31-129)||(21434033-21434131)
chr3 (152-231)||(19237400-19237479)
chr3 (1-31)||(19269488-19269518)
chr3 (1-30)||(6891207-6891236)
[»] chr7 (5 HSPs)
chr7 (130-236)||(38826261-38826367)
chr7 (31-129)||(37966438-37966536)
chr7 (31-129)||(38826400-38826498)
chr7 (180-232)||(37966354-37966406)
chr7 (1-30)||(38826370-38826399)
[»] chr4 (18 HSPs)
chr4 (130-236)||(49908473-49908579)
chr4 (131-236)||(37236323-37236428)
chr4 (31-129)||(5517320-5517421)
chr4 (130-236)||(5517181-5517287)
chr4 (31-129)||(37236462-37236560)
chr4 (31-129)||(12680021-12680119)
chr4 (129-236)||(17555189-17555296)
chr4 (34-129)||(49908612-49908707)
chr4 (159-236)||(12679927-12680004)
chr4 (140-236)||(34770577-34770673)
chr4 (43-125)||(50720307-50720389)
chr4 (31-234)||(6211740-6211955)
chr4 (187-236)||(50720167-50720215)
chr4 (1-31)||(5517289-5517319)
chr4 (1-31)||(37236431-37236461)
chr4 (45-114)||(17555120-17555189)
chr4 (88-121)||(34770716-34770749)
chr4 (1-30)||(49908582-49908611)
[»] chr8 (5 HSPs)
chr8 (130-236)||(5643271-5643377)
chr8 (43-129)||(17839002-17839088)
chr8 (137-236)||(17839305-17839403)
chr8 (153-236)||(17839144-17839226)
chr8 (33-125)||(34844877-34844969)
[»] chr6 (9 HSPs)
chr6 (130-236)||(13647359-13647465)
chr6 (132-236)||(34385202-34385306)
chr6 (43-129)||(13647240-13647326)
chr6 (31-129)||(34385341-34385439)
chr6 (43-129)||(2753475-2753561)
chr6 (160-236)||(26218503-26218579)
chr6 (152-231)||(2753617-2753696)
chr6 (50-121)||(21149171-21149242)
chr6 (43-85)||(13647139-13647181)
[»] scaffold0057 (2 HSPs)
scaffold0057 (136-234)||(63854-63952)
scaffold0057 (32-129)||(63992-64088)
[»] chr2 (2 HSPs)
chr2 (152-236)||(43779998-43780081)
chr2 (159-236)||(42755767-42755844)


Alignment Details
Target: chr1 (Bit Score: 99; Significance: 6e-49; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 130 - 236
Target Start/End: Original strand, 31867218 - 31867324
Alignment:
Q  130 ggaatcgaacacacacctctgggccatactcatgcaaattaaaccactacagcaattaacaattttgattaatctttcaaacagcttaatatatatttca 229  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  31867218 ggaatcgaacacacacctctgggccatactcatgcaaattaaaccactacagcagttaacatttttgattaatctttcaaacagcttaatatatatttca 31867317  T
Q  230 tagaatt 236  Q
    |||||||    
T  31867318 tagaatt 31867324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 31 - 129
Target Start/End: Original strand, 31867087 - 31867185
Alignment:
Q  31 atattttccagctagcgcagtggaaaagcagttgctatttctctcagacgtcgcgggtttgattcttccttcttctcccttttttatatttctgtatat 129  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  31867087 atattttccagttagcgcagtggagaagcagttgctatttctctcagacgtcgcgggttcgattcttccttcttgtcccttttttatatttctgtatat 31867185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 122
Target Start/End: Complemental strand, 44352505 - 44352416
Alignment:
Q  33 attttccagctagcgcagtggaaaagcagttgctatttctctcagacgtcgcgggtttgattcttccttcttctcccttttttatatttc 122  Q
    ||||||||| ||||||||||||||||||||| || |||||| |||| |||||| ||| || |||||  ||||||||||||||||||||||    
T  44352505 attttccagttagcgcagtggaaaagcagttactttttctcccagatgtcgcgtgttcgactcttctatcttctcccttttttatatttc 44352416  T

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Target: chr1; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 236
Target Start/End: Complemental strand, 44352343 - 44352267
Alignment:
Q  160 catgcaaattaaaccactacagcaattaacaattttgattaatctttcaaacagcttaatatatatttcatagaatt 236  Q
    |||| |||||| |||||||||| | |||||| ||||||| |||  ||||||||||||||||||||||||||||||||    
T  44352343 catgtaaattataccactacagtagttaacatttttgataaattcttcaaacagcttaatatatatttcatagaatt 44352267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 31867186 - 31867215
Alignment:
Q  1 atttacttttttgtcaaaaaagttccatgg 30  Q
    ||||||||||||||||||||||||||||||    
T  31867186 atttacttttttgtcaaaaaagttccatgg 31867215  T

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Target: chr5 (Bit Score: 91; Significance: 3e-44; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 130 - 236
Target Start/End: Complemental strand, 4307021 - 4306915
Alignment:
Q  130 ggaatcgaacacacacctctgggccatactcatgcaaattaaaccactacagcaattaacaattttgattaatctttcaaacagcttaatatatatttca 229  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||| |||||||||||||||    
T  4307021 ggaatcgaacacacacctctgggccatactcatgtaaattaaaccactacagcagttaacatttttgattaatctttcaaacagtttaatatatatttca 4306922  T
Q  230 tagaatt 236  Q
    |||||||    
T  4306921 tagaatt 4306915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 31 - 129
Target Start/End: Complemental strand, 4307152 - 4307054
Alignment:
Q  31 atattttccagctagcgcagtggaaaagcagttgctatttctctcagacgtcgcgggtttgattcttccttcttctcccttttttatatttctgtatat 129  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  4307152 atattttctaactagcgcagtggaaaagcagttgctatttctctcagacgttgcgggttcgattcttccttcttctcccttttttatatttctgtatat 4307054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 130 - 236
Target Start/End: Original strand, 15917195 - 15917301
Alignment:
Q  130 ggaatcgaacacacacctctgggccatactcatgcaaattaaaccactacagcaattaacaattttgattaatctttcaaacagcttaatatatatttca 229  Q
    |||||||||||||||||| ||||||||||||||| ||||| ||||||||||||| |||||| ||||||| ||||||||||||| |||||| |||||||||    
T  15917195 ggaatcgaacacacacctttgggccatactcatgtaaattgaaccactacagcagttaacatttttgataaatctttcaaacaacttaatgtatatttca 15917294  T
Q  230 tagaatt 236  Q
    |||||||    
T  15917295 tagaatt 15917301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 33 - 129
Target Start/End: Original strand, 2985481 - 2985577
Alignment:
Q  33 attttccagctagcgcagtggaaaagcagttgctatttctctcagacgtcgcgggtttgattcttccttcttctcccttttttatatttctgtatat 129  Q
    ||||||||| |||||||| |||||| || ||||| ||||||  ||| || ||| ||| || |||||||||||||||||||||||||||| |||||||    
T  2985481 attttccagttagcgcagcggaaaatcacttgctttttctcctagaagttgcgtgttcgactcttccttcttctcccttttttatatttatgtatat 2985577  T

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Target: chr5; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 15497778 - 15497726
Alignment:
Q  184 attaacaattttgattaatctttcaaacagcttaatatatatttcatagaatt 236  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  15497778 attaacatttttgatgaatctttcaaacagcttaatatatatttcatagaatt 15497726  T

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Target: chr5; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 153 - 236
Target Start/End: Original strand, 14316914 - 14316997
Alignment:
Q  153 ccatactcatgcaaattaaaccactacagcaattaacaattttgattaatctttcaaacagcttaatatatatttcatagaatt 236  Q
    ||||||||||| |||||| ||||||| |  | |||||| |||| ||  ||||||||||||||||||||||||||||||||||||    
T  14316914 ccatactcatgtaaattataccactaaattagttaacattttttatatatctttcaaacagcttaatatatatttcatagaatt 14316997  T

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Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 113
Target Start/End: Complemental strand, 15497853 - 15497782
Alignment:
Q  43 tagcgcagtggaaaagcagttgctatttctctcagac-gtcgcgggtttgattcttccttcttctccctttt 113  Q
    |||||||||||||||| ||||||| ||||||  |||| |||||| |||  ||||||||||||||||||||||    
T  15497853 tagcgcagtggaaaagtagttgctttttctccaagacggtcgcgagttcaattcttccttcttctccctttt 15497782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 4307053 - 4307023
Alignment:
Q  1 atttacttttttgtcaaaaaagttccatgga 31  Q
    |||||||||||||||||||||||||||||||    
T  4307053 atttacttttttgtcaaaaaagttccatgga 4307023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 91; Significance: 3e-44; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 130 - 236
Target Start/End: Original strand, 6891239 - 6891345
Alignment:
Q  130 ggaatcgaacacacacctctgggccatactcatgcaaattaaaccactacagcaattaacaattttgattaatctttcaaacagcttaatatatatttca 229  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  6891239 ggaatcaaacacacacctctgagccatactcatgcaaattaaaccactacagcagttaacaattttgattaatttttcaaacagcttaatatatatttca 6891338  T
Q  230 tagaatt 236  Q
    |||||||    
T  6891339 tagaatt 6891345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 31 - 129
Target Start/End: Complemental strand, 19269617 - 19269519
Alignment:
Q  31 atattttccagctagcgcagtggaaaagcagttgctatttctctcagacgtcgcgggtttgattcttccttcttctcccttttttatatttctgtatat 129  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  19269617 atattttccagctagcgtagtggaaaagcagttgctatttctctcagacgttgcgggtttgattcttccttcttctcccttttttatatttctgtatat 19269519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 130 - 236
Target Start/End: Complemental strand, 19269486 - 19269380
Alignment:
Q  130 ggaatcgaacacacacctctgggccatactcatgcaaattaaaccactacagcaattaacaattttgattaatctttcaaacagcttaatatatatttca 229  Q
    ||||||||||||||||||||  |||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  19269486 ggaatcgaacacacacctctaagccatactcatgtaaattaaaccactacagcagttaacatttttgattaatctttcaaacagcttaatatatatttca 19269387  T
Q  230 tagaatt 236  Q
    |||||||    
T  19269386 tagaatt 19269380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 31 - 129
Target Start/End: Complemental strand, 48757810 - 48757712
Alignment:
Q  31 atattttccagctagcgcagtggaaaagcagttgctatttctctcagacgtcgcgggtttgattcttccttcttctcccttttttatatttctgtatat 129  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  48757810 atattttccagctagcgcagtggaaaagcagttgctatttttctcagacgttgcgggttcgattcttccttcttctcccttttttatatttctgtatat 48757712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 130 - 236
Target Start/End: Original strand, 21434164 - 21434270
Alignment:
Q  130 ggaatcgaacacacacctctgggccatactcatgcaaattaaaccactacagcaattaacaattttgattaatctttcaaacagcttaatatatatttca 229  Q
    |||||| ||||||||||| |||||||||||||||  |||||||||||||||||| |||||| ||||||| |||||||||||||| |||||||||||||||    
T  21434164 ggaatcaaacacacacctttgggccatactcatgtcaattaaaccactacagcagttaacatttttgataaatctttcaaacagtttaatatatatttca 21434263  T
Q  230 tagaatt 236  Q
    |||||||    
T  21434264 tagaatt 21434270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 130 - 236
Target Start/End: Complemental strand, 48757679 - 48757573
Alignment:
Q  130 ggaatcgaacacacacctctgggccatactcatgcaaattaaaccactacagcaattaacaattttgattaatctttcaaacagcttaatatatatttca 229  Q
    ||||| ||||||||||||||| || |||| |||| |||||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  48757679 ggaattgaacacacacctctgagctatacccatgtaaattaaatcactacagcagttaacatttttgattaatctttcaaacagcttaatatatatttca 48757580  T
Q  230 tagaatt 236  Q
    |||||||    
T  48757579 tagaatt 48757573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 43 - 129
Target Start/End: Original strand, 6891120 - 6891206
Alignment:
Q  43 tagcgcagtggaaaagcagttgctatttctctcagacgtcgcgggtttgattcttccttcttctcccttttttatatttctgtatat 129  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  6891120 tagcgcagtggagaagcagttgctatttctctcggacgtcgcgggttcgattcttccttcttgtcccttttttatatttctgtatat 6891206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 130 - 236
Target Start/End: Complemental strand, 51818173 - 51818068
Alignment:
Q  130 ggaatcgaacacacacctctgggccatactcatgcaaattaaaccactacagcaattaacaattttgattaatctttcaaacagcttaatatatatttca 229  Q
    |||||| ||||||| |||||| |||||| ||||| ||||||| ||| |||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  51818173 ggaatcaaacacacgcctctgcgccatattcatgtaaattaa-ccattacagcaattaacatttttgataaatctttcaaacagcttaatatatatttca 51818075  T
Q  230 tagaatt 236  Q
    |||||||    
T  51818074 tagaatt 51818068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 129
Target Start/End: Original strand, 21434033 - 21434131
Alignment:
Q  31 atattttccagctagcgcagtggaaaagcagttgctatttctctcagacgtcgcgggtttgattcttccttcttctcccttttttatatttctgtatat 129  Q
    |||||||| || |||||||||||||||||||||||  ||||||||||| ||| | |||| |||||||||||||||||||  ||||||||||||||||||    
T  21434033 atattttctagttagcgcagtggaaaagcagttgccttttctctcagaagtcacaggttcgattcttccttcttctcccagttttatatttctgtatat 21434131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 152 - 231
Target Start/End: Original strand, 19237400 - 19237479
Alignment:
Q  152 gccatactcatgcaaattaaaccactacagcaattaacaattttgattaatctttcaaacagcttaatatatatttcata 231  Q
    |||||| ||||| |||||| |||||||||| | |||||| ||||||| |||  |||||||| ||||||||||||||||||    
T  19237400 gccatattcatgtaaattataccactacagtagttaacatttttgataaattcttcaaacaacttaatatatatttcata 19237479  T

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Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 19269518 - 19269488
Alignment:
Q  1 atttacttttttgtcaaaaaagttccatgga 31  Q
    |||||||||||||||||||||||||||||||    
T  19269518 atttacttttttgtcaaaaaagttccatgga 19269488  T

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Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 6891207 - 6891236
Alignment:
Q  1 atttacttttttgtcaaaaaagttccatgg 30  Q
    ||||||||||||||||||||||||||||||    
T  6891207 atttacttttttgtcaaaaaagttccatgg 6891236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 87; Significance: 8e-42; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 130 - 236
Target Start/End: Complemental strand, 38826367 - 38826261
Alignment:
Q  130 ggaatcgaacacacacctctgggccatactcatgcaaattaaaccactacagcaattaacaattttgattaatctttcaaacagcttaatatatatttca 229  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||| || |||||| |||| |||||||||||||||||||||||||||||||||    
T  38826367 ggaatcaaacacacacctctgggccatactcatgcaaattaaaccactacatcagttaacattttttattaatctttcaaacagcttaatatatatttca 38826268  T
Q  230 tagaatt 236  Q
    |||||||    
T  38826267 tagaatt 38826261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 31 - 129
Target Start/End: Complemental strand, 37966536 - 37966438
Alignment:
Q  31 atattttccagctagcgcagtggaaaagcagttgctatttctctcagacgtcgcgggtttgattcttccttcttctcccttttttatatttctgtatat 129  Q
    ||||||||||  |||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||    
T  37966536 atattttccaattagcgcagtggaaaagcagttgctttttctctcagacgtcgcgagtttgattctttcttcttctcccttttttatatttttgtatat 37966438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 31 - 129
Target Start/End: Complemental strand, 38826498 - 38826400
Alignment:
Q  31 atattttccagctagcgcagtggaaaagcagttgctatttctctcagacgtcgcgggtttgattcttccttcttctcccttttttatatttctgtatat 129  Q
    ||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||    
T  38826498 atattttccagttagcgcagtggagaagcagttgttatttctctcagacgtcgcgggttcgattcttctttcttgtcccttttttatatttctgtatat 38826400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 180 - 232
Target Start/End: Complemental strand, 37966406 - 37966354
Alignment:
Q  180 agcaattaacaattttgattaatctttcaaacagcttaatatatatttcatag 232  Q
    ||||||||||| ||||||| ||||||||||||| ||||||||||| |||||||    
T  37966406 agcaattaacatttttgataaatctttcaaacaacttaatatatagttcatag 37966354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 38826399 - 38826370
Alignment:
Q  1 atttacttttttgtcaaaaaagttccatgg 30  Q
    ||||||||||||||||||||||||||||||    
T  38826399 atttacttttttgtcaaaaaagttccatgg 38826370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 87; Significance: 8e-42; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 130 - 236
Target Start/End: Complemental strand, 49908579 - 49908473
Alignment:
Q  130 ggaatcgaacacacacctctgggccatactcatgcaaattaaaccactacagcaattaacaattttgattaatctttcaaacagcttaatatatatttca 229  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| |||||||||||||||| ||||||||||||||||    
T  49908579 ggaatcaaacacacacctctgggccatactcatgcaaattaaaccactacagcagttaacattttttattaatctttcaaacaacttaatatatatttca 49908480  T
Q  230 tagaatt 236  Q
    |||||||    
T  49908479 tagaatt 49908473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 131 - 236
Target Start/End: Complemental strand, 37236428 - 37236323
Alignment:
Q  131 gaatcgaacacacacctctgggccatactcatgcaaattaaaccactacagcaattaacaattttgattaatctttcaaacagcttaatatatatttcat 230  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||    
T  37236428 gaatcgaacacacacctttgggccatactcatgtaaattaaaccactacagcagttaacatttttgattaatatttcaaacagcttaatatatatttcat 37236329  T
Q  231 agaatt 236  Q
    ||||||    
T  37236328 agaatt 37236323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 31 - 129
Target Start/End: Complemental strand, 5517421 - 5517320
Alignment:
Q  31 atattttccagctagcgcagtggaaaagcagttgctatttctctcagacgtcgc---gggtttgattcttccttcttctcccttttttatatttctgtat 127  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||   |||||||||||||||||||||||||||||||||||||||||||    
T  5517421 atattttccagctagcgcagtggaaaagcagttgctatttttctcagacatcgccgcgggtttgattcttccttcttctcccttttttatatttctgtat 5517322  T
Q  128 at 129  Q
    ||    
T  5517321 at 5517320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 130 - 236
Target Start/End: Complemental strand, 5517287 - 5517181
Alignment:
Q  130 ggaatcgaacacacacctctgggccatactcatgcaaattaaaccactacagcaattaacaattttgattaatctttcaaacagcttaatatatatttca 229  Q
    ||||||||||||||||||||  |||||||||||| ||||||||||||||||| | |||||| |||| |||||||||||||||||||||||||||||||||    
T  5517287 ggaatcgaacacacacctctaagccatactcatgaaaattaaaccactacagaagttaacatttttaattaatctttcaaacagcttaatatatatttca 5517188  T
Q  230 tagaatt 236  Q
    |||||||    
T  5517187 tagaatt 5517181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 31 - 129
Target Start/End: Complemental strand, 37236560 - 37236462
Alignment:
Q  31 atattttccagctagcgcagtggaaaagcagttgctatttctctcagacgtcgcgggtttgattcttccttcttctcccttttttatatttctgtatat 129  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||| |||||||    
T  37236560 atattttccagctagcgcagtggaaaagtagttgctatttctcttagatgttgcgggtttgattcttccttcttctcccttttttatatttatgtatat 37236462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 31 - 129
Target Start/End: Complemental strand, 12680119 - 12680021
Alignment:
Q  31 atattttccagctagcgcagtggaaaagcagttgctatttctctcagacgtcgcgggtttgattcttccttcttctcccttttttatatttctgtatat 129  Q
    ||||||||||| |||||||||||||||||||||||| |||||| |||||||| || ||||||||||||||||||||||||||||||||||| |||||||    
T  12680119 atattttccagttagcgcagtggaaaagcagttgctttttctcccagacgtcacgagtttgattcttccttcttctcccttttttatatttttgtatat 12680021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 129 - 236
Target Start/End: Original strand, 17555189 - 17555296
Alignment:
Q  129 tggaatcgaacacacacctctgggccatactcatgcaaattaaaccactacagcaattaacaattttgattaatctttcaaacagcttaatatatatttc 228  Q
    |||| |||||||||| |||||| |||| | ||||  |||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||||    
T  17555189 tggattcgaacacacgcctctgcgccaaattcatttaaattaaaccactacagcaattaacatttttgattaatctttcaaaccgctgaatatatatttc 17555288  T
Q  229 atagaatt 236  Q
    ||||||||    
T  17555289 atagaatt 17555296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 34 - 129
Target Start/End: Complemental strand, 49908707 - 49908612
Alignment:
Q  34 ttttccagctagcgcagtggaaaagcagttgctatttctctcagacgtcgcgggtttgattcttccttcttctcccttttttatatttctgtatat 129  Q
    |||||||| |||||||||||| ||||||||| |||||||||||||||||||  ||| |||||||||||||| ||||||||||||||||||||||||    
T  49908707 ttttccagttagcgcagtggagaagcagttgttatttctctcagacgtcgcatgttcgattcttccttcttgtcccttttttatatttctgtatat 49908612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 159 - 236
Target Start/End: Complemental strand, 12680004 - 12679927
Alignment:
Q  159 tcatgcaaattaaaccactacagcaattaacaattttgattaatctttcaaacagcttaatatatatttcatagaatt 236  Q
    ||||| |||||||||||||||| || |||||| ||||||| |||||||||||||||||||||||||||||| ||||||    
T  12680004 tcatgtaaattaaaccactacaacagttaacatttttgataaatctttcaaacagcttaatatatatttcaaagaatt 12679927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 140 - 236
Target Start/End: Complemental strand, 34770673 - 34770577
Alignment:
Q  140 acacacctctgggccatactcatgcaaattaaaccactacagcaattaacaattttgattaatctttcaaacagcttaatatatatttcatagaatt 236  Q
    |||||||||| ||  ||||||||| |||||||||||||| |||| |||  | ||||||  |||||||||||||||||||||||||||||||||||||    
T  34770673 acacacctctaggttatactcatgtaaattaaaccactatagcagttataagttttgacaaatctttcaaacagcttaatatatatttcatagaatt 34770577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 43 - 125
Target Start/End: Complemental strand, 50720389 - 50720307
Alignment:
Q  43 tagcgcagtggaaaagcagttgctatttctctcagacgtcgcgggtttgattcttccttcttctcccttttttatatttctgt 125  Q
    |||||| |||||||||||||| || |||||| ||||||||||| ||| || |||||  |||||||||||||||||||||||||    
T  50720389 tagcgcggtggaaaagcagttactttttctcccagacgtcgcgtgttcgactcttctatcttctcccttttttatatttctgt 50720307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 31 - 234
Target Start/End: Complemental strand, 6211955 - 6211740
Alignment:
Q  31 atattttccagctagcgcagtggaaaagcagttgctatttctctcagacgtcgcgggtttgattcttccttcttctcccttttttatatttctgt----- 125  Q
    |||||||| || |||| ||||||||| | ||||| | || ||| |||| |||| | ||| ||||||||||||||||||||||||||||||| |||         
T  6211955 atattttctaggtagcacagtggaaa-gaagttgtttttactcccagatgtcgtgagttcgattcttccttcttctcccttttttatatttttgtcaaaa 6211857  T
Q  126 -atat--------ggaatcgaacacacacctctgggccatactcatgcaaattaaaccactacagcaattaacaattttgattaatctttcaaacagctt 216  Q
     ||||        ||| ||||||||||||||||| |||||| ||| | ||||||| | | |||| || |||||| || |||| |||||||||||||||||    
T  6211856 aatatccatggagggattcgaacacacacctctgcgccatattcaagtaaattaatc-attacaacagttaacatttatgataaatctttcaaacagctt 6211758  T
Q  217 aatatatatttcatagaa 234  Q
    ||||||||||||| ||||    
T  6211757 aatatatatttcaaagaa 6211740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 187 - 236
Target Start/End: Complemental strand, 50720215 - 50720167
Alignment:
Q  187 aacaattttgattaatctttcaaacagcttaatatatatttcatagaatt 236  Q
    |||| ||||||| |||||| ||||||||||||||||||||||||||||||    
T  50720215 aacatttttgataaatctt-caaacagcttaatatatatttcatagaatt 50720167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 5517319 - 5517289
Alignment:
Q  1 atttacttttttgtcaaaaaagttccatgga 31  Q
    |||||||||||||||||||||||||||||||    
T  5517319 atttacttttttgtcaaaaaagttccatgga 5517289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 37236461 - 37236431
Alignment:
Q  1 atttacttttttgtcaaaaaagttccatgga 31  Q
    |||||||||||||||||||||||||||||||    
T  37236461 atttacttttttgtcaaaaaagttccatgga 37236431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 114
Target Start/End: Original strand, 17555120 - 17555189
Alignment:
Q  45 gcgcagtggaaaagcagttgctatttctctcagacgtcgcgggtttgattcttccttcttctcccttttt 114  Q
    |||||||||||||| ||||||| | ||| ||||| |||||  |||  |||||||||| ||||||||||||    
T  17555120 gcgcagtggaaaagtagttgctttatctttcagatgtcgcaagttcaattcttcctttttctcccttttt 17555189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 88 - 121
Target Start/End: Complemental strand, 34770749 - 34770716
Alignment:
Q  88 tttgattcttccttcttctcccttttttatattt 121  Q
    |||||||||| |||||||||||||||||||||||    
T  34770749 tttgattctttcttcttctcccttttttatattt 34770716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 49908611 - 49908582
Alignment:
Q  1 atttacttttttgtcaaaaaagttccatgg 30  Q
    ||||||||||||||||||||||||||||||    
T  49908611 atttacttttttgtcaaaaaagttccatgg 49908582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 79; Significance: 5e-37; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 130 - 236
Target Start/End: Complemental strand, 5643377 - 5643271
Alignment:
Q  130 ggaatcgaacacacacctctgggccatactcatgcaaattaaaccactacagcaattaacaattttgattaatctttcaaacagcttaatatatatttca 229  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||| |||||| |||||| |||||||  |||||||||||||||||||||||||||||    
T  5643377 ggaatcgaacacacacctttgggccatactcatgtaaattaaaccacaacagcagttaacatttttgatatatctttcaaacagcttaatatatatttca 5643278  T
Q  230 tagaatt 236  Q
    |||||||    
T  5643277 tagaatt 5643271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 43 - 129
Target Start/End: Original strand, 17839002 - 17839088
Alignment:
Q  43 tagcgcagtggaaaagcagttgctatttctctcagacgtcgcgggtttgattcttccttcttctcccttttttatatttctgtatat 129  Q
    |||||||||||||||| ||||||| ||||||  ||| |||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  17839002 tagcgcagtggaaaagtagttgctttttctccgagatgtcgcgagttcgattcttccttcttctcccttttttatatttctgtatat 17839088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 137 - 236
Target Start/End: Original strand, 17839305 - 17839403
Alignment:
Q  137 aacacacacctctgggccatactcatgcaaattaaaccactacagcaattaacaattttgattaatctttcaaacagcttaatatatatttcatagaatt 236  Q
    ||||||| |||||  |||||||||||| ||||||| ||| ||||||| |||||| || |||| |||||||||||| ||||||||||||||||||| ||||    
T  17839305 aacacacgcctctacgccatactcatgtaaattaa-ccattacagcagttaacatttatgataaatctttcaaactgcttaatatatatttcatacaatt 17839403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 153 - 236
Target Start/End: Original strand, 17839144 - 17839226
Alignment:
Q  153 ccatactcatgcaaattaaaccactacagcaattaacaattttgattaatctttcaaacagcttaatatatatttcatagaatt 236  Q
    ||||||||||| ||||||| ||| ||||||| |||||| || |||| |||| ||||||||||||||||||||||||||| ||||    
T  17839144 ccatactcatgtaaattaa-ccattacagcagttaacatttatgataaatcattcaaacagcttaatatatatttcatacaatt 17839226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 33 - 125
Target Start/End: Original strand, 34844877 - 34844969
Alignment:
Q  33 attttccagctagcgcagtggaaaagcagttgctatttctctcagacgtcgcgggtttgattcttccttcttctcccttttttatatttctgt 125  Q
    ||||||||| |||||  |||||||||||||| || |||||| || |||||||| |||  | |||||  |||||||||||||||||||||||||    
T  34844877 attttccagttagcgtggtggaaaagcagttactttttctcccacacgtcgcgtgttcaactcttctatcttctcccttttttatatttctgt 34844969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 79; Significance: 5e-37; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 130 - 236
Target Start/End: Original strand, 13647359 - 13647465
Alignment:
Q  130 ggaatcgaacacacacctctgggccatactcatgcaaattaaaccactacagcaattaacaattttgattaatctttcaaacagcttaatatatatttca 229  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||| |||||||  || ||||||||||||||||||||||||||    
T  13647359 ggaatcgaacacacacctttgggccatactcatgtaaattaaaccactacagcagttaacatttttgatatatttttcaaacagcttaatatatatttca 13647458  T
Q  230 tagaatt 236  Q
    |||||||    
T  13647459 tagaatt 13647465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 132 - 236
Target Start/End: Complemental strand, 34385306 - 34385202
Alignment:
Q  132 aatcgaacacacacctctgggccatactcatgcaaattaaaccactacagcaattaacaattttgattaatctttcaaacagcttaatatatatttcata 231  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||||  | |||||| || |||| ||||||||||||||||||||||||||||||||    
T  34385306 aatcgaacacacacctctgggccctactcatgtaaattaaaccactacaatagttaacatttatgataaatctttcaaacagcttaatatatatttcata 34385207  T
Q  232 gaatt 236  Q
    |||||    
T  34385206 gaatt 34385202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 43 - 129
Target Start/End: Original strand, 13647240 - 13647326
Alignment:
Q  43 tagcgcagtggaaaagcagttgctatttctctcagacgtcgcgggtttgattcttccttcttctcccttttttatatttctgtatat 129  Q
    |||||||||||||||||| ||||| ||||||||||| |||||| ||| ||||||||||||||||||| |||||||||||||||||||    
T  13647240 tagcgcagtggaaaagcaattgctttttctctcagaagtcgcgagttcgattcttccttcttctcccatttttatatttctgtatat 13647326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 31 - 129
Target Start/End: Complemental strand, 34385439 - 34385341
Alignment:
Q  31 atattttccagctagcgcagtggaaaagcagttgctatttctctcagacgtcgcgggtttgattcttccttcttctcccttttttatatttctgtatat 129  Q
    |||||||| || ||||  ||||||||||||||||||  ||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||    
T  34385439 atattttctagttagcatagtggaaaagcagttgcttgttctctcagacgtcgcgagttcgattcttccttcttctcctttttttatatttctgtatat 34385341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 43 - 129
Target Start/End: Original strand, 2753475 - 2753561
Alignment:
Q  43 tagcgcagtggaaaagcagttgctatttctctcagacgtcgcgggtttgattcttccttcttctcccttttttatatttctgtatat 129  Q
    |||||||||||||||||||||| | ||||||   ||||||||| ||| || ||||||||||||||||||||||||||||||||||||    
T  2753475 tagcgcagtggaaaagcagttgttttttctcctcgacgtcgcgtgttcgactcttccttcttctcccttttttatatttctgtatat 2753561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 236
Target Start/End: Complemental strand, 26218579 - 26218503
Alignment:
Q  160 catgcaaattaaaccactacagcaattaacaattttgattaatctttcaaacagcttaatatatatttcatagaatt 236  Q
    |||| |||||| |||||| || ||||||||| ||||||| |||| ||||||||||||||||||||||||||| ||||    
T  26218579 catgtaaattataccactgcaacaattaacatttttgataaatccttcaaacagcttaatatatatttcatataatt 26218503  T

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Target: chr6; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 152 - 231
Target Start/End: Original strand, 2753617 - 2753696
Alignment:
Q  152 gccatactcatgcaaattaaaccactacagcaattaacaattttgattaatctttcaaacagcttaatatatatttcata 231  Q
    |||||| ||||| |||||| |||||||||| | |||||| |||| || |||| |||||||||||||||||||||||||||    
T  2753617 gccatattcatgtaaattataccactacagtagttaacattttttataaatccttcaaacagcttaatatatatttcata 2753696  T

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Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 121
Target Start/End: Complemental strand, 21149242 - 21149171
Alignment:
Q  50 gtggaaaagcagttgctatttctctcagacgtcgcgggtttgattcttccttcttctcccttttttatattt 121  Q
    ||||||||  ||||||| |||||| || |  ||| | ||| |||||||||||||||||||||||||||||||    
T  21149242 gtggaaaattagttgctttttctcccaaatatcgtgagttcgattcttccttcttctcccttttttatattt 21149171  T

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Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 13647139 - 13647181
Alignment:
Q  43 tagcgcagtggaaaagcagttgctatttctctcagacgtcgcg 85  Q
    |||||||||||||||||| ||||| ||||||||||| ||||||    
T  13647139 tagcgcagtggaaaagcaattgctttttctctcagaagtcgcg 13647181  T

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Target: scaffold0057 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 136 - 234
Target Start/End: Complemental strand, 63952 - 63854
Alignment:
Q  136 gaacacacacctctgggccatactcatgcaaattaaaccactacagcaattaacaattttgattaatctttcaaacagcttaatatatatttcatagaa 234  Q
    |||||||| ||||||||||||| ||||| |||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  63952 gaacacacgcctctgggccataatcatgaaaattaaaccactacaacaattaacatttttgataaatctttcaaacagcttaatatatatttcatagaa 63854  T

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Target: scaffold0057; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 32 - 129
Target Start/End: Complemental strand, 64088 - 63992
Alignment:
Q  32 tattttccagctagcgcagtggaaaagcagttgctatttctctcagacgtcgcgggtttgattcttccttcttctcccttttttatatttctgtatat 129  Q
    ||||||| || ||| |||||||||||||| ||||| |||||||||||||||||  ||| |||||||||||||||||||| ||||||||||||||||||    
T  64088 tattttctagttagtgcagtggaaaagcacttgctttttctctcagacgtcgcaagttcgattcttccttcttctccct-ttttatatttctgtatat 63992  T

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Target: chr2 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 152 - 236
Target Start/End: Original strand, 43779998 - 43780081
Alignment:
Q  152 gccatactcatgcaaattaaaccactacagcaattaacaattttgattaatctttcaaacagcttaatatatatttcatagaatt 236  Q
    |||||||||||| || ||| | ||||||| || |||||| |||| ||  |||||||||| |||||||||||||||||||||||||    
T  43779998 gccatactcatgtaa-ttatatcactacatcagttaacattttttatatatctttcaaagagcttaatatatatttcatagaatt 43780081  T

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Target: chr2; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 236
Target Start/End: Complemental strand, 42755844 - 42755767
Alignment:
Q  159 tcatgcaaattaaaccactacagcaattaacaattttgattaatctttcaaacagcttaatatatatttcatagaatt 236  Q
    ||||| ||||||  |||||||| || |||||| ||||||| |||| |||||||||  |||||||||||| ||| ||||    
T  42755844 tcatgtaaattagtccactacaacagttaacatttttgataaatccttcaaacagtataatatatattttatataatt 42755767  T

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