View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15456_low_76 (Length: 215)
Name: NF15456_low_76
Description: NF15456
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15456_low_76 |
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Alignment Details
Target: chr1 (Bit Score: 157; Significance: 1e-83; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 13 - 200
Target Start/End: Complemental strand, 6830917 - 6830723
Alignment:
| Q |
13 |
agatgaatacattgttttctcctatactaacggttctgagttgaattggaacaggataaattaacttctcctagagtatttgttaaaaaatggctagtat |
112 |
Q |
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| T |
6830917 |
agatgaatacattgttttctcctatactaacggttctgagttgaattggaacaggataaatcaacttctcctagagtatttgttaaaaaatggctagtat |
6830818 |
T |
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| Q |
113 |
aaagccccctcgcatggttttgaggaccgtccgtgcttggccatgacta-------gtgatagaaacttctcctattaaatcagcctattaatac |
200 |
Q |
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| T |
6830817 |
aaagccccctcgcatggttttgaggaccgtccgtgcttggccatgactagtgagtagtgatggaaacttctcctattaaatcagcctatcaatac |
6830723 |
T |
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