View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15456_low_8 (Length: 559)
Name: NF15456_low_8
Description: NF15456
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15456_low_8 |
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Alignment Details
Target: chr8 (Bit Score: 455; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 455; E-Value: 0
Query Start/End: Original strand, 27 - 549
Target Start/End: Complemental strand, 38085066 - 38084551
Alignment:
| Q |
27 |
tactgcatgcgatattagttgtcacaatttgaatggagccagcatgactaaattttaaaaaagtgataactgaaatgatattcggttaatatatttacta |
126 |
Q |
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| T |
38085066 |
tactgcatgcgatattagttgtcacaatttgaatggagccagcatgactaaattttaaaaaagtgataactgaaatgatattcggttaatatatttacta |
38084967 |
T |
|
| Q |
127 |
aaatacctagatagctacaaagtaacatcgtatggttagaacaagccctgccattacagagggagacacatcttgtttcttatgatcaaattaccaatat |
226 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38084966 |
aaatacctagatagctacaaagtaacattgtatggttagaacaagccctgccattacagagggagacacatcttgtttcttatgatcaaattaccaatat |
38084867 |
T |
|
| Q |
227 |
aacatctctaatggacaatggtgttgaacttttgaagggattggactggtgtcaattttaagagcagtgatgcaatttgcttatttgatgtcggtctgta |
326 |
Q |
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| T |
38084866 |
aacatctctaatgaacaatggtgttgaacttttgaagggattggactggtgtcaattttaagagcagtgatgcaatttgcttatttgatgtcggtct--- |
38084770 |
T |
|
| Q |
327 |
gtatgttatcagttatgacttgaccatctattgtannnnnnnccttcagttttctatagattcaattgattcgaggtaaacatatttaagacactttagg |
426 |
Q |
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||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
38084769 |
gtatgttatcagttatgacttgaccatctattgtattttttttcttcagttttctatggattcaattgattcgaggtaaacatatttaagacactttagg |
38084670 |
T |
|
| Q |
427 |
aactaaatataagtaagtgtctttctaaatcgaaattcacatatagattcgacatgtcgtagaagtttaatattctataattaaatatatgtttcttggt |
526 |
Q |
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||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38084669 |
aactaaata----taagtgtctttctaaatcgaaattcacatatagattcgacatgtcgtagaagtttaatattctataattaaatatatgtttcttggt |
38084574 |
T |
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| Q |
527 |
tagaaatttgtttttcacctttg |
549 |
Q |
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||||||||||||||||||||||| |
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| T |
38084573 |
tagaaatttgtttttcacctttg |
38084551 |
T |
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