View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15457_low_18 (Length: 237)
Name: NF15457_low_18
Description: NF15457
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15457_low_18 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 18 - 237
Target Start/End: Original strand, 40382685 - 40382904
Alignment:
| Q |
18 |
aactccctgggacatcaccaagcggagtgttatcaaacatctgaatccctttgacgaagcaccttggtggcttaatatcaaactcattctgaagcactcc |
117 |
Q |
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| T |
40382685 |
aactccctgggacatcaccaagcggagtgttatcaaacatctgaatccctttgacgaagcaccttggtggcttaatatcaaactcattctgaagcactcc |
40382784 |
T |
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| Q |
118 |
ttcaaaagggtacttcaccagtgataggtaatggaaccatatccagtaaggtggaatcctatccctactgatgaagaatccactgaagagaagaaagtaa |
217 |
Q |
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| T |
40382785 |
ttcaaaagggtacttcaccagtgataggtaatggaaccatatccagtaaggtggaatcctatccctacttatgaagaatccactgaagagaagaaagtaa |
40382884 |
T |
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| Q |
218 |
gctaaaatagcaaccacaac |
237 |
Q |
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| T |
40382885 |
gctaaaatagcaaccacaac |
40382904 |
T |
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